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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Vet. Sci.</journal-id>
<journal-title>Frontiers in Veterinary Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Vet. Sci.</abbrev-journal-title>
<issn pub-type="epub">2297-1769</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fvets.2024.1497115</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Veterinary Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Dietary supplementation with <italic>Epimedium</italic> contributes to the improvement of hormone levels, gut microbiota, and serum metabolite composition in the Chinese forest musk deer (<italic>Moschus berezovskii</italic>)</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name><surname>Xie</surname> <given-names>Shan</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="author-notes" rid="fn0005"><sup>&#x2020;</sup></xref>
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<contrib contrib-type="author" equal-contrib="yes">
<name><surname>Yang</surname> <given-names>Qinlin</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="author-notes" rid="fn0005"><sup>&#x2020;</sup></xref>
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<contrib contrib-type="author">
<name><surname>Ying</surname> <given-names>Zaixiang</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
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<contrib contrib-type="author">
<name><surname>Cai</surname> <given-names>Mingcheng</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
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<contrib contrib-type="author">
<name><surname>Fan</surname> <given-names>Wenqiao</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
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<contrib contrib-type="author">
<name><surname>Gao</surname> <given-names>Hanyu</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
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<contrib contrib-type="author" corresp="yes">
<name><surname>Feng</surname> <given-names>Xiaolan</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
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<contrib contrib-type="author" corresp="yes">
<name><surname>Wu</surname> <given-names>Yongjiang</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="c002"><sup>&#x002A;</sup></xref>
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<aff id="aff1"><sup>1</sup><institution>College of Smart Agriculture, Chongqing University of Arts and Sciences</institution>, <addr-line>Yongchuan</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>College of Biology and Food Engineering, Chongqing Three Gorges University</institution>, <addr-line>Wanzhou</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>Chongqing Institute of Medicinal Plant Cultivation</institution>, <addr-line>Nanchuan</addr-line>, <country>China</country></aff>
<author-notes>
<fn fn-type="edited-by" id="fn0006">
<p>Edited by: Izhar Hyder Qazi, South China Agricultural University, China</p>
</fn>
<fn fn-type="edited-by" id="fn0007">
<p>Reviewed by: Lei Deng, Harvard Medical School, United States</p>
<p>Chao Xu, Jilin Agricultural University, China</p>
</fn>
<corresp id="c001">&#x002A;Correspondence: Xiaolan Feng, <email>13896737996@163.com</email></corresp>
<corresp id="c002">Yongjiang Wu, <email>wyongjang@163.com</email></corresp>
<fn fn-type="equal" id="fn0005"><p><sup>&#x2020;</sup>These authors have contributed equally to this work</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>22</day>
<month>01</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>11</volume>
<elocation-id>1497115</elocation-id>
<history>
<date date-type="received">
<day>16</day>
<month>09</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>18</day>
<month>12</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2025 Xie, Yang, Ying, Cai, Fan, Gao, Feng and Wu.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Xie, Yang, Ying, Cai, Fan, Gao, Feng and Wu</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>The Chinese forest musk deer (<italic>Moschus berezovskii</italic>) is a small ruminant animal with special economic value. It is listed as a National Level I key protected species in China. However, these animals are prone to stress responses in captive environments. <italic>Epimedium</italic>, a traditional Chinese herb with aphrodisiac and anti-stress properties, may have potential benefits for the health of the captive Chinese forest musk deer, though its efficacy requires further investigation. This study aimed to evaluate the effects of dietary supplementation with <italic>Epimedium</italic> on the hormone levels, gut microbiota composition, and serum metabolism of the Chinese forest musk deer. The fourteen adult male Chinese forest musk deer with similar initial body weights (7.0&#x202F;&#x00B1;&#x202F;0.3&#x202F;kg) and an average age of 4.5&#x202F;years were randomly divided into two groups, each containing seven animals. The control group was fed a standard diet without <italic>Epimedium</italic>, while the <italic>Epimedium</italic> group received the standard diet supplemented with 15&#x202F;g <italic>Epimedium</italic> /kg DM. The results indicated that the inclusion of <italic>Epimedium</italic> in the diet increased dry matter intake (DMI) and improved the ratio of feed to gain (F/G), with an increase in fecal testosterone levels (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). 16S rDNA sequencing analysis revealed that <italic>Epimedium</italic> enhanced the richness and diversity of the gut microbiota in the Chinese forest musk deer, increasing the relative abundance of beneficial bacteria such as Firmicutes, while reducing the relative abundance of the potentially pathogenic Proteobacteria (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). A widely targeted metabolomics analysis identified 25 differential metabolites between the two groups. Significant alterations were observed in key metabolic pathways related to lipid metabolism, hormone regulation, and antioxidation, such as ovarian steroidogenesis, tyrosine metabolism, and glycerophospholipid metabolism. Furthermore, correlation analysis between gut microbiota and serum differential metabolites showed that the relative abundances of <italic>Clostridia_vadinBB60_group</italic> and <italic>UCG-010</italic> were positively correlated with anserine and 7-ketocholesterol, respectively (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). In conclusion, <italic>Epimedium</italic> positively influenced feed intake and hormone levels in the Chinese forest musk deer by modulating gut microbiota composition and serum metabolism.</p>
</abstract>
<kwd-group>
<kwd><italic>Epimedium</italic></kwd>
<kwd><italic>Moschus berezovskii</italic></kwd>
<kwd>hormone levels</kwd>
<kwd>gut microbiota</kwd>
<kwd>serum metabolism</kwd>
</kwd-group>
<contract-num rid="cn1">2023M740414</contract-num>
<contract-num rid="cn2">CSTB2022NSCQ-MSX1098</contract-num>
<contract-num rid="cn3">2023MSXM181</contract-num>
<contract-num rid="cn4">KJQN202001312</contract-num>
<contract-num rid="cn5">24JK115-2606</contract-num>
<contract-num rid="cn6">KJQN202201350</contract-num>
<contract-num rid="cn7">R2022YS08</contract-num>
<contract-sponsor id="cn1">China Postdoctoral Science Foundation in China</contract-sponsor>
<contract-sponsor id="cn2">Chongqing Natural Science Foundation in China</contract-sponsor>
<contract-sponsor id="cn3">Traditional Chinese Medicine Research Project of Chongqing Science and Technology Bureau and Health Commission in China</contract-sponsor>
<contract-sponsor id="cn4">Project of Science and Technology Research Program of Chongqing Education Commission in China</contract-sponsor>
<contract-sponsor id="cn5">Chongqing Basic Research Projects in China</contract-sponsor>
<contract-sponsor id="cn6">Youth Project of Science and Technology Research Program of Chongqing Education Commission in China</contract-sponsor>
<contract-sponsor id="cn7">Tower Foundation Program of Chongqing University of Arts and Sciences in China</contract-sponsor>
<counts>
<fig-count count="8"/>
<table-count count="4"/>
<equation-count count="0"/>
<ref-count count="67"/>
<page-count count="15"/>
<word-count count="8612"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Animal Nutrition and Metabolism</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="sec1">
<label>1</label>
<title>Introduction</title>
<p>The Chinese forest musk deer (<italic>Moschus berezovskii</italic>), also known as the dwarf musk deer, is a rare and endangered species primarily found in the mountain forests of Sichuan, Gansu, and Shaanxi provinces in China (<xref ref-type="bibr" rid="ref1">1</xref>). This animal is highly valued for its unique musk gland, which secretes musk, a substance of significant economic and medicinal importance in fields such as medicine, perfumery, and cosmetics (<xref ref-type="bibr" rid="ref2">2</xref>, <xref ref-type="bibr" rid="ref3">3</xref>). However, the artificial breeding of the Chinese forest musk deer is fraught with considerable challenges. Due to their inherently timid and solitary nature (<xref ref-type="bibr" rid="ref4">4</xref>), it is particularly difficult to meet their growth and reproductive requirements in captive environments (<xref ref-type="bibr" rid="ref5">5</xref>). This adversity directly compromises the health of the Chinese forest musk deer and the quality of the musk they produce (<xref ref-type="bibr" rid="ref6">6</xref>, <xref ref-type="bibr" rid="ref7">7</xref>). Compared to their wild counterparts, the captive Chinese forest musk deer are more susceptible to various health issues, including diarrhea, pneumonia, and malnutrition (<xref ref-type="bibr" rid="ref8">8</xref>, <xref ref-type="bibr" rid="ref9">9</xref>). Therefore, the conservation of this rare species and the enhancement of its health status are of paramount importance.</p>
<p>Nutritional supplementation is a critical method for improving animal health and survival capabilities (<xref ref-type="bibr" rid="ref10">10</xref>). For wildlife, appropriate nutritional interventions can significantly enhance physiological functions and increase resistance to adverse environmental conditions. <italic>Epimedium</italic>, a traditional Chinese medicinal herb, is extensively utilized in traditional Chinese medicine (TCM) due to its significant bioactive properties, including anti-inflammatory, antioxidant, and hormone-regulating effects. It is particularly recognized for its potential to modulate sexual function and enhance physical strength (<xref ref-type="bibr" rid="ref11 ref12 ref13">11&#x2013;13</xref>). For the Chinese forest musk deer, hormonal levels are critical indicators of health and reproductive capacity (<xref ref-type="bibr" rid="ref14">14</xref>). Abnormal hormonal levels can result in reproductive disorders, delayed growth and development, and other health issues (<xref ref-type="bibr" rid="ref15">15</xref>). The primary bioactive compounds in <italic>Epimedium</italic>, particularly icariin, are believed to effectively promote testosterone and sperm production, thereby improving reproductive function and overall health status (<xref ref-type="bibr" rid="ref16">16</xref>). Additionally, flavanols extracted from <italic>Epimedium</italic> have been shown to enhance sexual function by stimulating Leydig cells in the testes, leading to increased secretion of testosterone and other androgens (<xref ref-type="bibr" rid="ref17">17</xref>).</p>
<p>The gut microbiota is an essential component of animal health, playing critical roles in nutrient absorption, immune regulation, and disease prevention (<xref ref-type="bibr" rid="ref18">18</xref>, <xref ref-type="bibr" rid="ref19">19</xref>). Flavonoids and other bioactive compounds in <italic>Epimedium</italic> improve digestive absorption and immune status by modulating the composition and function of the gut microbiota (<xref ref-type="bibr" rid="ref20">20</xref>). Incorporating <italic>Epimedium</italic> into broiler diets can modulate the abundance of beneficial bacteria, such as <italic>Lactobacillus</italic>, improve gut microbiota composition, and increase the concentration of metabolites like lactic acid and short-chain fatty acids, thereby enhancing metabolic function (<xref ref-type="bibr" rid="ref21">21</xref>). <italic>Epimedium</italic> can also improve the health status of rats by regulating lipid metabolism, energy metabolism, and amino acid metabolism. This helps to reduce the levels of harmful metabolites in the blood while increasing the levels of beneficial metabolites (<xref ref-type="bibr" rid="ref22">22</xref>). Additionally, the flavonoids in <italic>Epimedium</italic> can enhance the activity of antioxidant enzymes such as superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px) (<xref ref-type="bibr" rid="ref23">23</xref>). These enzymes play a crucial role in scavenging free radicals and protecting cells from oxidative damage. These characteristics make <italic>Epimedium</italic> a promising natural feed additive, suitable for use in livestock and poultry farming, offering an effective solution for improving animal health and economic efficiency.</p>
<p>In view of this, the present study aims to explore the potential effects of <italic>Epimedium</italic> as a dietary supplement on the gut microbiota composition, serum metabolic components, and hormone levels in the Chinese forest musk deer. The results could provide new scientific evidence for enhancing the health and hormonal regulation of the captive Chinese forest musk deer.</p>
</sec>
<sec sec-type="materials|methods" id="sec2">
<label>2</label>
<title>Materials and methods</title>
<sec id="sec3">
<label>2.1</label>
<title>Experimental design</title>
<p>The experiment was conducted at the Chinese forest musk deer breeding base of the Institute of Medicinal Plant Cultivation in Chongqing, China. The fourteen adult male Chinese forest musk deer with similar initial body weights (7.0&#x202F;&#x00B1;&#x202F;0.3&#x202F;kg) and an average age of 4.5&#x202F;years were randomly divided into two groups, each containing seven animals. The CK group was fed a standard diet without the addition of <italic>Epimedium</italic>, while the EPI group received the standard diet supplemented with 15&#x202F;g <italic>Epimedium</italic> /kg DM. The composition and nutritional levels of the standard feed are shown in <xref ref-type="table" rid="tab1">Table 1</xref>. All the Chinese forest musk deer were housed individually, and the environmental conditions, including temperature, humidity, and management methods, were kept identical for both groups. One week before the trial, the ventilation equipment was thoroughly inspected to ensure proper functioning, and the pens were meticulously cleaned and disinfected. Daily management during the trial period was conducted according to the protocol, with feeding scheduled at 3:00&#x202F;PM each day. The pre-trial period lasted 7&#x202F;d, followed by a formal trial period of 30&#x202F;d.</p>
<table-wrap position="float" id="tab1">
<label>Table 1</label>
<caption>
<p>Composition and nutrient levels of the basal diet (DM basis) %.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top">Items</th>
<th align="center" valign="top">Content</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top" colspan="2">Ingredients</td>
</tr>
<tr>
<td align="left" valign="top">Leaves of <italic>Pittosporum truncatum Pritz</italic></td>
<td align="center" valign="top">50.00</td>
</tr>
<tr>
<td align="left" valign="top">Corn</td>
<td align="center" valign="top">30.00</td>
</tr>
<tr>
<td align="left" valign="top">Soybean meal</td>
<td align="center" valign="top">11.80</td>
</tr>
<tr>
<td align="left" valign="top">wheat bran</td>
<td align="center" valign="top">3.50</td>
</tr>
<tr>
<td align="left" valign="top">Corn germ meal</td>
<td align="center" valign="top">2.40</td>
</tr>
<tr>
<td align="left" valign="top">NaCl</td>
<td align="center" valign="top">0.30</td>
</tr>
<tr>
<td align="left" valign="top">CaHPO<sub>4</sub></td>
<td align="center" valign="top">0.50</td>
</tr>
<tr>
<td align="left" valign="top">Limestone</td>
<td align="center" valign="top">0.50</td>
</tr>
<tr>
<td align="left" valign="top">Premix<xref ref-type="table-fn" rid="tfn1"><sup>a</sup></xref></td>
<td align="center" valign="top">1.00</td>
</tr>
<tr>
<td align="left" valign="top">Total</td>
<td align="center" valign="top">100.00</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Nutrient levels</td>
</tr>
<tr>
<td align="left" valign="top">Dry matter</td>
<td align="center" valign="top">73.50</td>
</tr>
<tr>
<td align="left" valign="top">Metabolic energy/(MJ /kg)<xref ref-type="table-fn" rid="tfn2"><sup>b</sup></xref></td>
<td align="center" valign="top">8.24</td>
</tr>
<tr>
<td align="left" valign="top">Crude protein</td>
<td align="center" valign="top">10.64</td>
</tr>
<tr>
<td align="left" valign="top">Neutral detergent fiber</td>
<td align="center" valign="top">30.23</td>
</tr>
<tr>
<td align="left" valign="top">Acid detergent fiber</td>
<td align="center" valign="top">15.26</td>
</tr>
<tr>
<td align="left" valign="top">Calcium</td>
<td align="center" valign="top">0.57</td>
</tr>
<tr>
<td align="left" valign="top">Phosphorus</td>
<td align="center" valign="top">0.31</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn1">
<label>a</label>
<p>The premix provided the following per kg of the diet: VA 7000&#x202F;IU, VD 1800&#x202F;IU, VE 40&#x202F;IU, Cu 12&#x202F;mg, Fe 60&#x202F;mg, Mn 50&#x202F;mg, Zn 40&#x202F;mg, I 1.0&#x202F;mg, Se 0.27&#x202F;mg, Co 0.3&#x202F;mg.</p>
</fn>
<fn id="tfn2">
<label>b</label>
<p>Metabolic energy is the calculated value, while the rest are measured values.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="sec4">
<label>2.2</label>
<title>Sample collection</title>
<p>During the trial period, the remaining feed was weighed daily using an electronic scale before feeding to calculate the dry matter intake (DMI). Given that the Chinese forest musk deer are classified as a national first-grade protected animal in China, they are highly sensitive to external environments and prone to stress reactions, which can even lead to death. Growth performance and serum metabolomics analyses require direct manipulation of the animals, including procedures such as weighing and blood collection, which can induce stress in the Chinese forest musk deer. Therefore, in this experiment, we selected only the three Chinese forest musk deer per group for these operations to minimize potential impacts on other individuals and ensure the smooth progression and safety of the experiment. On days 1 and 30 of the trial, the three randomly selected Chinese forest musk deer from each group were weighed after a 12&#x202F;h fasting period to determine the average daily gain (ADG). On the final day of the trial, the three Chinese forest musk deer from each group were randomly selected for blood collection. The blood samples were placed in coagulation-promoting tubes and centrifuged at 3000&#x202F;rpm for 10&#x202F;min at 4&#x00B0;C to collect the serum. All serum samples were stored at &#x2212;80&#x00B0;C for subsequent analysis. On the same day, fresh fecal samples were collected from all the 14 Chinese forest musk deer, placed in sterile centrifuge tubes, and rapidly frozen in liquid nitrogen. These samples were then stored at &#x2212;80&#x00B0;C for 16S rDNA sequencing of the gut microbiome.</p>
</sec>
<sec id="sec5">
<label>2.3</label>
<title>Fecal hormone level analysis</title>
<p>The levels of testosterone, estradiol, and progesterone in the fecal were measured using enzyme-linked immunosorbent assay (ELISA) kits. These kits were purchased from Quanzhou Ruixin Biotechnology Co., Ltd.</p>
</sec>
<sec id="sec6">
<label>2.4</label>
<title>Fecal microbiota profiling</title>
<p>The total DNA of fecal bacteria was extracted using the E.Z.N.A. Soil DNA Kit (Omega Bio-tek, Inc., United States). Concentration and quality of the genomic DNA were checked by NanoDrop 2000 spectrophotometer (Thermo Scientific Inc., United States). The V3&#x2013;V4 regions of the bacterial 16S rDNA gene were amplified using universal primers 338F (5&#x2019;-ACTCCTACGGGA-GGCAGCAG-3&#x2032;) and 806R (5&#x2019;-GGACTACHVGGGTWTCTAAT-3&#x2032;). The universal primers with barcode sequences were synthesized and the amplification was carried out on an ABI 9700 PCR instrument (Applied Biosystems, Inc., United States). After purifying the PCR amplification products, the concentration was measured, and high-throughput sequencing was performed on the Illumina Novaseq sequencing platform.</p>
<p>Sequencing data were processed using Pear software (<xref ref-type="bibr" rid="ref24">24</xref>) (version 0.9.6) for sequence assembly, filtering, and chimera removal, resulting in optimized sequences. High-quality sequences were clustered into OTUs using Vsearch software (<xref ref-type="bibr" rid="ref25">25</xref>) (version 2.7.1) with a sequence similarity threshold of 99%. Species classification for each OTU was determined by aligning the sequences with the Silva138 database (<xref ref-type="bibr" rid="ref26">26</xref>) using the BLAST algorithm (<xref ref-type="bibr" rid="ref27">27</xref>). Alpha and Beta diversity analyses were performed based on OTU and abundance data using QIIME2 software (<xref ref-type="bibr" rid="ref28">28</xref>) (version 2024.2). Species composition bar plots were generated using R project (<xref ref-type="bibr" rid="ref29">29</xref>) (version 3.6.0) based on species annotation and relative abundance results. LEfSe analysis was conducted using Python software (version 2.7) (<xref ref-type="bibr" rid="ref30">30</xref>). The sequencing was conducted at Beijing Allwegene Technology Co., Ltd.</p>
</sec>
<sec id="sec7">
<label>2.5</label>
<title>Determination of serum metabolites</title>
<p>The sample stored at &#x2212;80&#x00B0;C refrigerator was thawed on ice and vortexed for 10&#x202F;s. 50&#x202F;&#x03BC;L of serum sample and 300&#x202F;&#x03BC;L of extraction solution (ACN: Methanol&#x202F;=&#x202F;1:4, V/V) containing internal standards were added into a 2&#x202F;mL microcentrifuge tube. The sample was vortexed for 3&#x202F;min and then centrifuged at 12000&#x202F;rpm for 10&#x202F;min (4&#x00B0;C). 200&#x202F;&#x03BC;L of the supernatant was collected and placed in &#x2212;20&#x00B0;C for 30&#x202F;min, and then centrifuged at 12000&#x202F;rpm for 3&#x202F;min (4&#x00B0;C). A 180&#x202F;&#x03BC;L aliquots of supernatant were transferred for LC&#x2013;MS analysis. The relative concentrations of serum metabolites were analyzed using an LC-ESI-MS/MS system (UPLC, ExionLC AD, <ext-link xlink:href="https://sciex.com.cn/" ext-link-type="uri">https://sciex.com.cn/</ext-link>; MS, QTRAP<sup>&#x00AE;</sup> System, <ext-link xlink:href="https://sciex.com/" ext-link-type="uri">https://sciex.com/</ext-link>). After the analysis, the raw data obtained were imported into Progenesis QI software (<xref ref-type="bibr" rid="ref31">31</xref>) (version 3.0) for data preprocessing, which was used for subsequent analysis.</p>
<p>Metabolite information was obtained by annotating the database using HMDB<xref ref-type="fn" rid="fn0001"><sup>1</sup></xref> and Metlin.<xref ref-type="fn" rid="fn0002"><sup>2</sup></xref> Partial least squares discriminant analysis (PLS-DA) was performed using R project. For two-group analysis, differential metabolites were determined by Variable Importance in Projection (VIP&#x202F;&#x003E;&#x202F;1) and <italic>p</italic>-value (<italic>p</italic>-value &#x003C;0.05, <italic>t</italic>-test). Identified metabolites were annotated using the KEGG Compound database<xref ref-type="fn" rid="fn0003"><sup>3</sup></xref>, and the annotated metabolites were then mapped to the KEGG Pathway database.<xref ref-type="fn" rid="fn0004"><sup>4</sup></xref> The analysis was conducted at Beijing Allwegene Technology Co., Ltd.</p>
</sec>
<sec id="sec8">
<label>2.6</label>
<title>Correlation analysis between rumen microbiota and serum metabolite profiles</title>
<p>Correlation analysis was performed between differential microbiota and metabolites. The spearman correlation coefficients between microbiome and metabolite data were calculated using the psych package in the R project. Correlation heatmaps were generated using the heatmap package.</p>
</sec>
<sec id="sec9">
<label>2.7</label>
<title>Statistical analysis</title>
<p>All data were analyzed using independent sample <italic>t</italic>-tests, and the results are presented as mean&#x202F;&#x00B1;&#x202F;standard error of the mean (SEM). Experimental data with <italic>p</italic>&#x202F;&#x003C;&#x202F;0.05 were considered statistically significant.</p>
</sec>
</sec>
<sec sec-type="results" id="sec10">
<label>3</label>
<title>Results</title>
<sec id="sec11">
<label>3.1</label>
<title>The effects of <italic>Epimedium</italic> on growth performance and hormone levels in the Chinese forest musk deer</title>
<p>As shown in <xref ref-type="table" rid="tab2">Table 2</xref>, compared to the CK group, the final BW and ADG tended to increase in the EPI group (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.1). The DMI and F/G in the EPI group were higher than those in the CK group (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05), indicating that dietary supplementation with <italic>Epimedium</italic> significantly increased the feed intake and feed conversion ratio in the Chinese forest musk deer. As shown in <xref ref-type="table" rid="tab3">Table 3</xref>, <italic>Epimedium</italic> supplementation increased fecal testosterone levels in the Chinese forest musk deer (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). Compared to the CK group, the progesterone levels in the fecal samples of the EPI group showed a trend towards increase (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.1). Although there were slight increases in estradiol levels, these changes were not statistically significant. This suggests that <italic>Epimedium</italic> can effectively regulate hormone levels in the Chinese forest musk deer.</p>
<table-wrap position="float" id="tab2">
<label>Table 2</label>
<caption>
<p>Growth performance of the Chinese forest musk deer.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top">Item</th>
<th align="center" valign="top">CK</th>
<th align="center" valign="top">EPI</th>
<th align="center" valign="top"><italic>p</italic>-value</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">Initial BW, kg</td>
<td align="center" valign="top">6.91&#x202F;&#x00B1;&#x202F;0.24</td>
<td align="center" valign="top">7.31&#x202F;&#x00B1;&#x202F;0.53</td>
<td align="center" valign="top">0.685</td>
</tr>
<tr>
<td align="left" valign="top">Final BW, kg</td>
<td align="center" valign="top">7.15&#x202F;&#x00B1;&#x202F;0.18</td>
<td align="center" valign="top">7.91&#x202F;&#x00B1;&#x202F;0.29</td>
<td align="center" valign="top">0.089</td>
</tr>
<tr>
<td align="left" valign="top">ADG, kg</td>
<td align="center" valign="top">0.09&#x202F;&#x00B1;&#x202F;0.06</td>
<td align="center" valign="top">0.02&#x202F;&#x00B1;&#x202F;0.01</td>
<td align="center" valign="top">0.090</td>
</tr>
<tr>
<td align="left" valign="top">DMI, g/d</td>
<td align="center" valign="top">99.48&#x202F;&#x00B1;&#x202F;3.13</td>
<td align="center" valign="top">110.55&#x202F;&#x00B1;&#x202F;2.86</td>
<td align="center" valign="top">0.012</td>
</tr>
<tr>
<td align="left" valign="top">F/G</td>
<td align="center" valign="top">1.70&#x202F;&#x00B1;&#x202F;0.26</td>
<td align="center" valign="top">0.74&#x202F;&#x00B1;&#x202F;0.05</td>
<td align="center" valign="top">0.024</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>DMI, dry matter intake; Initial BW, initial body weight; Final BW, final body weight; ADG, average daily gain; F/G, the ratio of feed to gain; EPI, <italic>Epimedium</italic> group; CK, control group; The statistical results are shown as means&#x202F;&#x00B1;&#x202F;SEM.</p>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="tab3">
<label>Table 3</label>
<caption>
<p>Fecal hormone levels in the Chinese forest musk deer.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top">Item</th>
<th align="center" valign="top">CK</th>
<th align="center" valign="top">EPI</th>
<th align="center" valign="top"><italic>p</italic>-value</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">Progesterone, ng/mL</td>
<td align="center" valign="top">5.37&#x202F;&#x00B1;&#x202F;0.30</td>
<td align="center" valign="top">6.29&#x202F;&#x00B1;&#x202F;0.16</td>
<td align="center" valign="top">0.055</td>
</tr>
<tr>
<td align="left" valign="top">Estradiol, pg./g</td>
<td align="center" valign="top">892.51.68&#x202F;&#x00B1;&#x202F;51.04</td>
<td align="center" valign="top">1012.16&#x202F;&#x00B1;&#x202F;58.95</td>
<td align="center" valign="top">0.200</td>
</tr>
<tr>
<td align="left" valign="top">Testosterone, ng/g</td>
<td align="center" valign="top">2.57&#x202F;&#x00B1;&#x202F;0.29</td>
<td align="center" valign="top">3.68&#x202F;&#x00B1;&#x202F;0.21</td>
<td align="center" valign="top">0.037</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>EPI, <italic>Epimedium</italic> group; CK, control group; The statistical results are shown as means&#x202F;&#x00B1;&#x202F;SEM.</p>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="sec12">
<label>3.2</label>
<title>Gut microbiome 16S rDNA sequencing analysis</title>
<sec id="sec13">
<label>3.2.1</label>
<title>The effects of <italic>Epimedium</italic> on the abundance and diversity of gut microbiota</title>
<p>As shown in <xref ref-type="fig" rid="fig1">Figure 1A</xref>, the EPI group had 1,124 unique operational taxonomic units (OTUs), while the CK group had 908 unique OTUs. Both groups shared 2,919 OTUs. The alpha diversity indices of 14 samples were calculated using the QIIME2 software (<xref ref-type="supplementary-material" rid="SM1">Supplementary Table S1</xref>). Compared to the CK group, the Chao1 and Observed species indices of the EPI group were slightly higher, but the differences were not statistically significant (<xref ref-type="fig" rid="fig1">Figures 1C</xref>,<xref ref-type="fig" rid="fig1">D</xref>). Additionally, the Shannon index in the EPI group showed a trend towards increased values, although the change in the PD_whole_tree index was not significant (<xref ref-type="fig" rid="fig1">Figures 1E</xref>,<xref ref-type="fig" rid="fig1">F</xref>). Beta diversity analysis revealed that the samples from the CK and EPI groups tended to cluster internally, with distinct separation between the groups, indicating significant differences in the gut microbiota composition between the two groups (<xref ref-type="fig" rid="fig1">Figure 1B</xref>).</p>
<fig position="float" id="fig1">
<label>Figure 1</label>
<caption>
<p>Comparison of gut microbial diversity between the two groups. The Venn diagram shows the number of shared or unique OTUs <bold>(A)</bold>. PLS-DA analysis based on OTUs <bold>(B)</bold>. Box plot of Chao1 index <bold>(C)</bold>. Box plot of observed species index <bold>(D)</bold>. Box plot of PD_whole_tree index <bold>(E)</bold>. Box plot of Shannon index <bold>(F)</bold>. EPI, <italic>Epimedium</italic> group; CK, control group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g001.tif"/>
</fig>
</sec>
<sec id="sec14">
<label>3.2.2</label>
<title>The effects of <italic>Epimedium</italic> on the gut microbiota composition</title>
<p>A total of 21 phylum, 33 class, 68 order, 117 family, and 258 genus were identified across both groups. As shown in <xref ref-type="fig" rid="fig2">Figure 2A</xref>, at the phylum level, the gut microbiota of the Chinese forest musk deer was primarily composed of Bacteroidetes, Firmicutes, and Proteobacteria, with Firmicutes being the dominant phylum. After dietary supplementation with <italic>Epimedium</italic>, the relative abundance of Firmicutes in the EPI group was higher compared to that in the control group, while the relative abundance of Proteobacteria was lower in the EPI group than in the control group (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). Notably, Firmicutes are considered beneficial bacteria, whereas Proteobacteria are viewed as potential pathogens, indicating that <italic>Epimedium</italic> supplementation may have improved the gut microbiota composition of the Chinese forest musk deer. At the genus level, the relative abundance of <italic>Ruminobacter</italic> and <italic>UCG-005</italic> decreased, while the relative abundance of the beneficial genus <italic>Bacteroides</italic> increased in the EPI group compared to the CK group (<xref ref-type="fig" rid="fig2">Figure 2B</xref>).</p>
<fig position="float" id="fig2">
<label>Figure 2</label>
<caption>
<p>Effects of <italic>Epimedium</italic> on gut microbial community. Phylum&#x2212;level <bold>(A)</bold>. Genus&#x2212;level <bold>(B)</bold>. EPI, <italic>Epimedium</italic> group; CK, control group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g002.tif"/>
</fig>
</sec>
<sec id="sec15">
<label>3.2.3</label>
<title>Gut microbiota differential species analysis</title>
<p>Linear discriminant analysis Effect Size (LEfSe) analysis revealed significantly dominant species in both groups. As shown in <xref ref-type="fig" rid="fig3">Figure 3A</xref>, 8 clades were found to have higher abundances in the CK group, while 12 clades were more abundant in the EPI group. The differences in the abundances of various microbial taxa between the CK and EPI groups are depicted in <xref ref-type="fig" rid="fig3">Figure 3B</xref>. In the CK group, the most significant difference was observed for the genus <italic>Succinivibrio</italic>, whereas in the EPI group, the classes <italic>Clostridia</italic> and Firmicutes, as well as the order <italic>Oscillospirales</italic>, exhibited notable differences. Among these, <italic>Clostridia</italic> and Firmicutes showed the greatest intergroup differences, with LDA scores greater than 4. Firmicutes is a critical component of the normal gut microbiota, playing a significant role in maintaining intestinal health and helping to prevent diarrhea and other gastrointestinal diseases.</p>
<fig position="float" id="fig3">
<label>Figure 3</label>
<caption>
<p>LEfSe cladogram comparing microbial communities between two groups <bold>(A)</bold>. The red represents CK, and the green represents EPI. Significantly different bacterial taxa identified by the linear discriminant analysis effect size <bold>(B)</bold>. Bacteria with an LDA score&#x202F;&#x003E;&#x202F;3 are considered to be significantly discriminative. The red represents CK, and the green represents EPI. CK, control group; EPI, <italic>Epimedium</italic> group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g003.tif"/>
</fig>
</sec>
<sec id="sec16">
<label>3.2.4</label>
<title>Prediction of gut microbial functions</title>
<p>Prediction of the metabolic functions of the gut microbiota revealed a relatively high abundance of functional genes associated with thiamine metabolism, nicotinate and nicotinamide metabolism, amino sugar and nucleotide sugar metabolism, and RNA polymerase (<xref ref-type="fig" rid="fig4">Figure 4</xref>). Differential analysis using a <italic>t</italic>-test identified 12 pathways with significant differences in related genes between the two groups. Compared to the CK group, the EPI group exhibited enhanced pathways in gut microbiota, including ubiquinone and other terpenoid-quinone biosynthesis, glutathione metabolism, and nicotinate and nicotinamide metabolism (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). Conversely, pathways such as thiamine metabolism, starch and sucrose metabolism, and methane metabolism were significantly reduced in the EPI group (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). The functional gene classification of the gut microbiota primarily involved energy metabolism, antioxidant protection, and DNA repair.</p>
<fig position="float" id="fig4">
<label>Figure 4</label>
<caption>
<p>Microbial functional analysis. The blue represents CK, and the yellow represents EPI. CK, control group; EPI, <italic>Epimedium</italic> group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g004.tif"/>
</fig>
</sec>
</sec>
<sec id="sec17">
<label>3.3</label>
<title>Serum widely targeted metabolomics analysis</title>
<sec id="sec18">
<label>3.3.1</label>
<title>Serum metabolite multivariate statistical analysis</title>
<p>As shown in <xref ref-type="fig" rid="fig5">Figure 5A</xref>, there is a clear separation of metabolites between the two experimental groups, with a well-defined clustering pattern, indicating significant differences between the metabolites of the EPI group and those of the CK group. To assess the presence of overfitting in the PLS-DA model, permutation tests were conducted for statistical validation of the PLS-DA model. R<sup>2</sup>Y and Q<sup>2</sup> represent the explanatory and predictive abilities within the PLS-DA model, respectively, with values closer to 1 indicating greater stability and reliability of the model. With R<sup>2</sup>Y&#x202F;=&#x202F;0.998 and Q<sup>2</sup>&#x202F;=&#x202F;0.632, the model demonstrates good predictive ability and reliable results (<xref ref-type="fig" rid="fig5">Figure 5B</xref>).</p>
<fig position="float" id="fig5">
<label>Figure 5</label>
<caption>
<p>PLS-DA score plot for the CK and EPI groups <bold>(A)</bold>. The yellow represents CK, and the green represents EPI. PLS-DA model validation plot <bold>(B)</bold>. CK, control group; EPI, <italic>Epimedium</italic> group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g005.tif"/>
</fig>
</sec>
<sec id="sec19">
<label>3.3.2</label>
<title>Serum differential metabolites</title>
<p>Through a combination of univariate statistical analysis and multivariate statistical analysis methods, we screened for differential metabolites between the groups. The screening criteria used were a <italic>p</italic>-value &#x003C;0.05 &#x0026; VIP&#x202F;&#x2265;&#x202F;1. The results of the screening were visualized in a volcano plot, revealing a total of 25 differential metabolites, with 11 metabolites being upregulated and 14 metabolites being downregulated (<xref ref-type="fig" rid="fig6">Figure 6A</xref>). In addition, hierarchical clustering analysis of the differential metabolites showed that the serum differential metabolites were distinct between the groups, as shown in <xref ref-type="fig" rid="fig6">Figure 6B</xref>. Red indicates an increase in the relative content of substances, while green indicates a decrease in the relative content of substances. The intra-group clustering of the CK group and the EPI group was ideal. Compared with the CK group, the expression levels of anserine, 2-hydroxy estrone, and estrone were upregulated in the EPI group, while the expression levels of nicotinamide-n-oxide, asn-met, and salidroside were downregulated (<xref ref-type="table" rid="tab4">Table 4</xref>). Dietary supplementation with <italic>Epimedium</italic> led to significant changes in the serum metabolism of the Chinese forest musk deer.</p>
<fig position="float" id="fig6">
<label>Figure 6</label>
<caption>
<p>Volcano plot of intergroup differential metabolites <bold>(A)</bold>. The red represents significantly upregulated metabolites, green represents significantly downregulated metabolites, and gray represents non-significantly changed metabolites. The size of the dots represents the VIP value. Heatmap of clustering analysis of gut differential metabolites <bold>(B)</bold>. The color blocks at different positions represent the relative expression levels of the corresponding metabolites at those locations. CK, control group; EPI, <italic>Epimedium</italic> group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g006.tif"/>
</fig>
<table-wrap position="float" id="tab4">
<label>Table 4</label>
<caption>
<p>Partial information on differential metabolites.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top">Name</th>
<th align="center" valign="top">Vip</th>
<th align="center" valign="top"><italic>p</italic>-value</th>
<th align="left" valign="top">Up/Down</th>
<th align="center" valign="top">Cas</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="bottom">Ethyl-dodecanoate</td>
<td align="center" valign="bottom">1.91</td>
<td align="center" valign="bottom">0.029</td>
<td align="left" valign="bottom">Up</td>
<td align="center" valign="bottom">106-33-2</td>
</tr>
<tr>
<td align="left" valign="bottom">N6, N6, N6-Trimethyl-L-lysine</td>
<td align="center" valign="bottom">1.71</td>
<td align="center" valign="bottom">0.048</td>
<td align="left" valign="bottom">Down</td>
<td align="center" valign="bottom">&#x2013;</td>
</tr>
<tr>
<td align="left" valign="bottom">7-Ketocholesterol</td>
<td align="center" valign="bottom">2.01</td>
<td align="center" valign="bottom">0.022</td>
<td align="left" valign="bottom">Up</td>
<td align="center" valign="bottom">566-28-9</td>
</tr>
<tr>
<td align="left" valign="bottom">Nicotinamide-N-Oxide</td>
<td align="center" valign="bottom">1.80</td>
<td align="center" valign="bottom">0.039</td>
<td align="left" valign="bottom">Down</td>
<td align="center" valign="bottom">1986-81-8</td>
</tr>
<tr>
<td align="left" valign="bottom">Anserine</td>
<td align="center" valign="bottom">2.02</td>
<td align="center" valign="bottom">0.022</td>
<td align="left" valign="bottom">Up</td>
<td align="center" valign="bottom">584-85-0</td>
</tr>
<tr>
<td align="left" valign="bottom">2-Hydroxy Estrone</td>
<td align="center" valign="bottom">1.92</td>
<td align="center" valign="bottom">0.047</td>
<td align="left" valign="bottom">Up</td>
<td align="center" valign="bottom">362-06-1</td>
</tr>
<tr>
<td align="left" valign="bottom">N(Alpha)-Acetyl-Epsilon-(2-Propenal) Lysine</td>
<td align="center" valign="bottom">1.77</td>
<td align="center" valign="bottom">0.042</td>
<td align="left" valign="bottom">Up</td>
<td align="center" valign="bottom">99124-74-0</td>
</tr>
<tr>
<td align="left" valign="bottom">Asn-Met</td>
<td align="center" valign="bottom">1.65</td>
<td align="center" valign="bottom">0.043</td>
<td align="left" valign="bottom">Down</td>
<td align="center" valign="bottom">&#x2013;</td>
</tr>
<tr>
<td align="left" valign="bottom">Salidroside</td>
<td align="center" valign="bottom">1.89</td>
<td align="center" valign="bottom">0.016</td>
<td align="left" valign="bottom">Down</td>
<td align="center" valign="bottom">10338-51-9</td>
</tr>
<tr>
<td align="left" valign="bottom">Estrone</td>
<td align="center" valign="bottom">2.16</td>
<td align="center" valign="bottom">0.016</td>
<td align="left" valign="bottom">Up</td>
<td align="center" valign="bottom">53-16-7</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Vip, variable importance in projection; Up/Down, levels of metabolites adjusted upward/downward; Cas, Chemical Abstracts Service.</p>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="sec20">
<label>3.3.3</label>
<title>Serum metabolic pathways</title>
<p>Based on the differential metabolites identified, KEGG pathway enrichment analysis was performed, and the enriched pathways were visually represented in bar charts and bubble plots. The pathways with significantly different metabolisms were selected based on the significance index <italic>p</italic>-value. The KEGG results showed that the differential metabolites between the CK and EPI groups were annotated into five categories of metabolic pathways, with metabolic pathways and glycerophospholipid metabolism being the most significantly enriched (<xref ref-type="fig" rid="fig7">Figure 7A</xref>). Additionally, KEGG pathway enrichment analysis indicated that the major metabolic pathways altered in the EPI group compared to the CK group included glycerophospholipid metabolism, tyrosine metabolism, nicotinate and nicotinamide metabolism, ovarian steroidogenesis, and beta-alanine metabolism (<xref ref-type="fig" rid="fig7">Figure 7B</xref>). Among these, glycerophospholipid metabolism and tyrosine metabolism were the most significantly altered pathways, suggesting that the supplementation of <italic>Epimedium</italic> might have had a notable impact on metabolic pathways related to lipid metabolism and hormone regulation.</p>
<fig position="float" id="fig7">
<label>Figure 7</label>
<caption>
<p>Differential metabolite pathway classification diagram <bold>(A)</bold>. The color represents the <italic>p</italic>-value of the enrichment analysis, with a deeper red color indicating a more significant degree of enrichment. Enrichment plot of differential metabolite pathways <bold>(B)</bold>. The color of the bubble represents the <italic>p</italic>-value of the enrichment analysis, with a deeper red color indicating a more significant degree of enrichment. The size of the dots represents the number of differential metabolites enriched in that pathway. CK, control group; EPI, <italic>Epimedium</italic> group.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g007.tif"/>
</fig>
</sec>
</sec>
<sec id="sec21">
<label>3.4</label>
<title>Correlation analysis for differential microbes and metabolites</title>
<p>Through Pearson correlation analysis, it was found that there was a correlation between differential metabolites and differential bacterial genera. As shown in <xref ref-type="fig" rid="fig8">Figure 8</xref>, the <italic>Clostridia_vadinBB60_group</italic> exhibits a positive correlation with anserine and N(alpha)-acetyl-epsilon-(2-propenal) lysine, and a negative correlation with N-acetyl-L-leucine and N-methyl-2-pyridone-5-carboxamide (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05). Similarly, <italic>UCG-010</italic> shows a positive correlation with 7-ketocholesterol and ethyl-dodecanoate, while displaying a negative correlation with N6, N6, N6-trimethyl-l-lysine (<italic>p</italic>&#x202F;&#x003C;&#x202F;0.05).</p>
<fig position="float" id="fig8">
<label>Figure 8</label>
<caption>
<p>Microbiome-metabolome correlation heatmap. &#x002A;&#x002A;&#x002A;&#x002A; <italic>p</italic>&#x202F;&#x003C;&#x202F;0.0001. Red represents a positive correlation, and blue represents a negative correlation.</p>
</caption>
<graphic xlink:href="fvets-11-1497115-g008.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="sec22">
<label>4</label>
<title>Discussion</title>
<p><italic>Epimedium</italic> possesses various bioactive properties, and its appropriate supplementation as a feed additive can effectively enhance feed utilization rates in animals, thereby significantly improving economic benefits (<xref ref-type="bibr" rid="ref32">32</xref>). In this study, compared to the CK group, dietary supplementation with <italic>Epimedium</italic> increased feed intake and feed conversion ratio in the experimental group, with a trend towards increased ADG. Zhang et al. (<xref ref-type="bibr" rid="ref21">21</xref>) found that adding <italic>Epimedium</italic> to the diet improved intestinal function and gut microbiota in broilers, significantly increasing ADG and enhancing growth performance. This effect is attributed to the flavonoids in <italic>Epimedium</italic>, which can promote the secretion of digestive enzymes, enhancing the digestion and absorption of nutrients in the feed, thereby improving feed efficiency and promoting animal growth (<xref ref-type="bibr" rid="ref33">33</xref>, <xref ref-type="bibr" rid="ref34">34</xref>). <italic>Epimedium</italic> leaves can enhance testosterone production in rat Leydig cells by regulating the expression of steroidogenic enzymes (<xref ref-type="bibr" rid="ref35">35</xref>). Research has shown that polyphenolic compounds in <italic>Epimedium</italic> significantly elevate levels of reproductive hormones such as testosterone and luteinizing hormone in albino rats, while significantly reducing levels of progesterone and estradiol (<xref ref-type="bibr" rid="ref36">36</xref>). However, in our study, we found that adding <italic>Epimedium</italic> to the diet increased fecal testosterone levels, but had no effect on progesterone and estradiol levels. This may be due to the unique digestive system and physiological characteristics of musk deer, which make their metabolic mechanisms significantly different from those of mice. Additionally, the experimental conditions in our study (such as housing environment, diet, sample processing, etc.) may differ from those in mouse experiments. These differences in conditions may have affected the measurement of progesterone levels. These findings suggest that <italic>Epimedium</italic> has a positive impact on increasing feed intake and regulating hormone levels in the Chinese forest musk deer, thereby effectively maintaining overall health. The yield of musk is closely related to fluctuations in hormone levels (<xref ref-type="bibr" rid="ref14">14</xref>). Studies have indicated that quercetin can promote musk secretion by regulating the hormone production (such as testosterone and estradiol) in the Chinese forest musk deer (<xref ref-type="bibr" rid="ref37">37</xref>). Additionally, administering exogenous testosterone during the non-secretory season can also promote musk secretion in the Chinese forest musk deer (<xref ref-type="bibr" rid="ref38">38</xref>, <xref ref-type="bibr" rid="ref39">39</xref>). In this study, the level of testosterone increased after the addition of <italic>Epimedium</italic>, hypothesizing that <italic>Epimedium</italic> may increase musk yield by influencing hormone levels. Future studies should consider to provide a more comprehensive assessment of the benefits of <italic>Epimedium</italic> supplementation in the Chinese forest musk deer.</p>
<p>The diversity of gut microbiota is associated with the host&#x2019;s health status, and <italic>Epimedium</italic> can effectively improve animal health by modulating the composition of the gut microbiota (<xref ref-type="bibr" rid="ref40">40</xref>). In this study, after adding <italic>Epimedium</italic> to the Chinese forest musk deer diet, the Chao1 index, observed species index, and Shannon index in the EPI group were all higher than in the CK group, but these differences did not reach statistical significance. This may indicate that the addition of <italic>Epimedium</italic> has a positive effect on the richness and diversity of the Chinese forest musk deer gut microbiota, but this effect was not detected significantly due to the limited sample size or experimental conditions. According to the annotation results, the main bacterial phyla in the gut of the Chinese forest musk deer are Bacteroidetes, Firmicutes, and Proteobacteria, with Firmicutes being the dominant phylum, which is consistent with previous research findings (<xref ref-type="bibr" rid="ref41">41</xref>, <xref ref-type="bibr" rid="ref42">42</xref>). Firmicutes is one of the main microbiota in the gut of ruminants, capable of producing short-chain fatty acids (SCFAs) such as acetic acid, propionic acid, and butyric acid through fermentation (<xref ref-type="bibr" rid="ref43">43</xref>). These SCFAs play a crucial role in maintaining gut health and amino acid metabolism. Additionally, ecological biotherapy strategies enriched with Firmicutes can be used to prevent or treat colitis, demonstrating potential anti-inflammatory properties (<xref ref-type="bibr" rid="ref44">44</xref>). In contrast, Proteobacteria are considered potentially harmful microbiota, as their increased relative abundance is associated with various gut diseases and inflammatory bowel diseases (<xref ref-type="bibr" rid="ref45">45</xref>). They are present in lower amounts in the gut of healthy animals (<xref ref-type="bibr" rid="ref46">46</xref>). Abnormal growth of Proteobacteria may represent an imbalance in the gut microbiota and could serve as a potential marker for disease risk (<xref ref-type="bibr" rid="ref47">47</xref>). After adding <italic>Epimedium</italic> to the Chinese forest musk deer diet, the relative abundance of Firmicutes in the EPI group was higher than in the control group, while the relative abundance of Proteobacteria was lower. This indicates that <italic>Epimedium</italic> has a positive effect on regulating the composition of the musk deer gut microbiota. At the genus level, the dominant microbiota in the gut is <italic>Bacteroides</italic>. We found that the relative abundance of <italic>Bacteroides</italic> in the EPI group was higher than that in the CK group. Studies have demonstrated that an increase in the abundance of <italic>Bacteroides</italic> species can reduce lipopolysaccharide (LPS) levels and inhibit immune responses, thereby preventing the onset of cardiovascular diseases in humans (<xref ref-type="bibr" rid="ref48">48</xref>). <italic>Bacteroides</italic> can effectively degrade polysaccharides, providing essential nutrients for other gut microbiota, which promotes symbiotic relationships and synergistic interactions among gut microbiota (<xref ref-type="bibr" rid="ref49">49</xref>). In conclusion, we hypothesize that <italic>Epimedium</italic> has potential benefits in regulating the gut microbiota of the Chinese forest musk deer by increasing the abundance of beneficial bacteria and reducing the abundance of harmful bacteria, thereby maintaining the stability of the gut microbiome composition. Although we minimized the impact of parasites on the gut microbiota of the Chinese forest musk deer through regular health checks and preventive treatment with anti-parasitic drugs, recent studies have shown that parasitic infections can affect the composition and function of the gut microbiota (<xref ref-type="bibr" rid="ref50">50</xref>). These findings suggest that future research should further investigate the interaction between parasitic infections and the gut microbiota to achieve a more comprehensive understanding of the various factors influencing the health of the Chinese forest musk deer.</p>
<p>In this study, the overall composition of serum metabolites showed differences. A total of 25 differential metabolites were detected in the serum. We found that dietary supplementation with <italic>Epimedium</italic> may impact metabolic pathways involved in lipid metabolism, antioxidation, and hormone regulation. <italic>Epimedium</italic> is believed to help increase sex hormone levels and effectively improve sexual function (<xref ref-type="bibr" rid="ref51">51</xref>). Fluctuations in sex hormone levels can affect the estrous cycle and reproductive capacity of animals (<xref ref-type="bibr" rid="ref52">52</xref>). Estrone may indirectly influence the behavior of the male Chinese forest musk deer during the breeding season, promoting musk secretion (<xref ref-type="bibr" rid="ref53">53</xref>). Additionally, sex hormones such as testosterone, estrogen, and cortisol play a significant role in determining the composition of musk (<xref ref-type="bibr" rid="ref39">39</xref>). In this experiment, compared to the CK group, the levels of estrone and 2-hydroxy estrone in the EPI group increased, which positively impacted the ovarian steroidogenesis and prolactin signaling pathways. Anserine, a natural compound found in animal tissues, has been shown to effectively reduce oxidative stress-induced damage by regulating antioxidant-related signaling pathways such as Keap1-Nrf2 and JNK-Caspase-3, thereby exerting antioxidant effects (<xref ref-type="bibr" rid="ref54">54</xref>, <xref ref-type="bibr" rid="ref55">55</xref>). Chen et al. (<xref ref-type="bibr" rid="ref56">56</xref>) found that anserine can increase the activity of serum superoxide dismutase and reduce levels of malondialdehyde, alkaline phosphatase, and alanine aminotransferase, thereby alleviating hyperuricemia in rats. In this experiment, anserine levels increased and were enriched in histidine metabolism and beta-alanine metabolism pathways. Histidine metabolism, a critical amino acid metabolic process, plays a vital role in protein synthesis, neurotransmitter function, and the immune system, and has a positive impact on appetite regulation (<xref ref-type="bibr" rid="ref57">57</xref>, <xref ref-type="bibr" rid="ref58">58</xref>). <italic>&#x03B2;-</italic>Alanine can combine with L-histidine to form carnosine, a compound with antioxidant properties that can neutralize free radicals and reduce oxidative stress-induced damage to muscle cells (<xref ref-type="bibr" rid="ref59">59</xref>, <xref ref-type="bibr" rid="ref60">60</xref>). Glycerophospholipid metabolism involves various enzymes and metabolic pathways that regulate lipid synthesis and degradation, thereby influencing cellular lipid balance and metabolism. The products of glycerophospholipid metabolism can affect the body&#x2019;s immune response by modulating the synthesis and release of inflammatory mediators (<xref ref-type="bibr" rid="ref61">61</xref>). In summary, <italic>Epimedium</italic> may positively influences related metabolic pathways by regulating the production of key metabolites, effectively increasing hormone levels and antioxidant capacity. This contributes to the stabilization of metabolic and physiological functions in the Chinese forest musk deer.</p>
<p>Correlation analysis revealed associations between <italic>Clostridia_vadinBB60_group</italic> and <italic>UCG-010</italic> with different metabolites. We found that <italic>Clostridia_vadinBB60_group</italic> was positively correlated with anserine. As a beneficial bacterium, <italic>Clostridia_vadinBB60_group</italic> can effectively degrade complex organic compounds such as cellulose, hemicellulose, and polysaccharides, producing SCFAs like acetate, butyrate, and propionate, which play a crucial role in host energy supply, gut health, and microbial balance (<xref ref-type="bibr" rid="ref62 ref63 ref64">62&#x2013;64</xref>). This is particularly important in ruminant production, where it contributes to improving feed conversion efficiency (<xref ref-type="bibr" rid="ref65">65</xref>). Dietary supplementation of <italic>Epimedium</italic>, the level of anserine increased, which may be related to the increased abundance of <italic>Clostridia_vadinBB60_group</italic> in this study. Further experiments are needed to verify this hypothesis by vitro culture and mechanistic studies. <italic>UCG-010</italic> is widely present in the intestines of animals, particularly within the digestive systems of ruminants, where it plays a significant role in the gut microbiota by breaking down complex carbohydrates, thereby effectively promoting nutrient absorption (<xref ref-type="bibr" rid="ref66">66</xref>, <xref ref-type="bibr" rid="ref67">67</xref>). In this study, <italic>UCG-010</italic> was found to be positively correlated with 7-ketocholesterol. After adding the diet with <italic>Epimedium</italic>, the relative abundance of <italic>UCG-010</italic> increased, which may affect the metabolism of 7-ketocholesterol, predicting it may affect the metabolism of 7-ketocholesterol. Further research is needed to focus on clarifying their regulation relationship and systematic mechanism.</p>
<p>In this study, only a small number of the Chinese forest musk deer samples (<italic>n</italic> =&#x202F;3) were used for growth performance and metabolomics analysis, which is directly related to the rarity and protected status of this species. The limited number of animals included in our study may introduce biases. Specifically, the small sample size may not fully capture the natural variability within the species, potentially affecting the robustness of our statistical analyses. Due to insufficient statistical power, true biological effects may be overlooked. Furthermore, the limited representation of the Chinese forest musk deer population may not adequately reflect the complexity and diversity of their biological systems, leading to an incomplete understanding of the underlying mechanisms. To address these limitations, future studies should aim to replicate our findings with larger and more diverse sample sizes. This would enhance the reliability and validity of the results, allowing for a more comprehensive exploration of the relevant biological pathways. However, given the conservation status and ethical considerations associated with studying the Chinese forest musk deer, alternative approaches such as non-invasive sampling methods or collaborations with multiple research institutions may be necessary to effectively increase the sample size.</p>
</sec>
<sec sec-type="conclusions" id="sec23">
<label>5</label>
<title>Conclusion</title>
<p>Dietary supplementation with <italic>Epimedium</italic> may increase the feed intake and feed conversion ratio of the Chinese forest musk deer, and positively influence their hormone levels, particularly with an observed increase in testosterone levels. Additionally, <italic>Epimedium</italic> may enhance the richness and diversity of the gut microbiota in the Chinese forest musk deer and altered serum metabolism, including amino acid metabolism, lipid metabolism, and energy metabolism. In summary, appropriate supplementation of <italic>Epimediu</italic>m may contribute to the improvement of hormone levels, gut microbiota, and serum metabolite composition in the Chinese forest musk deer.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="sec24">
<title>Data availability statement</title>
<p>The data presented in the study are deposited in the NCBI repository, accession number PRJNA1195406.</p>
</sec>
<sec sec-type="ethics-statement" id="sec25">
<title>Ethics statement</title>
<p>The animal study was approved by Ethics Committee of Chongqing University of Arts and Sciences (approval number, CQWLDF0031). The study was conducted in accordance with the local legislation and institutional requirements.</p>
</sec>
<sec sec-type="author-contributions" id="sec26">
<title>Author contributions</title>
<p>SX: Conceptualization, Data curation, Formal analysis, Writing &#x2013; original draft. QY: Conceptualization, Data curation, Formal analysis, Writing &#x2013; original draft. ZY: Methodology, Writing &#x2013; original draft. MC: Visualization, Writing &#x2013; original draft. WF: Visualization, Writing &#x2013; original draft. HG: Methodology, Writing &#x2013; original draft. XF: Conceptualization, Funding acquisition, Project administration, Writing &#x2013; review &#x0026; editing. YW: Conceptualization, Funding acquisition, Project administration, Writing &#x2013; review &#x0026; editing.</p>
</sec>
<sec sec-type="funding-information" id="sec27">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This research was supported by the China Postdoctoral Science Foundation in China (2023M740414), the Chongqing Natural Science Foundation in China (CSTB2022NSCQ-MSX1098), the Traditional Chinese Medicine Research Project of Chongqing Science and Technology Bureau and Health Commission in China (2023MSXM181), the Project of Science and Technology Research Program of Chongqing Education Commission in China (KJQN202001312), the Chongqing Basic Research Projects in China (2024jbky-05), the Youth Project of Science and Technology Research Program of Chongqing Education Commission in China (KJQN202201350), and the Tower Foundation Program of Chongqing University of Arts and Sciences in China (R2022YS08).</p>
</sec>
<sec sec-type="COI-statement" id="sec28">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="sec29">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec sec-type="supplementary-material" id="sec30">
<title>Supplementary material</title>
<p>The Supplementary material for this article can be found online at: <ext-link xlink:href="https://www.frontiersin.org/articles/10.3389/fvets.2024.1497115/full#supplementary-material" ext-link-type="uri">https://www.frontiersin.org/articles/10.3389/fvets.2024.1497115/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.ZIP" id="SM1" mimetype="application/zip" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
<fn-group>
<fn id="fn0001"><p><sup>1</sup><ext-link xlink:href="https://hmdb.ca/" ext-link-type="uri">https://hmdb.ca/</ext-link></p></fn>
<fn id="fn0002"><p><sup>2</sup><ext-link xlink:href="https://metlin.scripps.edu/" ext-link-type="uri">https://metlin.scripps.edu/</ext-link></p></fn>
<fn id="fn0003"><p><sup>3</sup><ext-link xlink:href="http://www.kegg.jp/kegg/compound/" ext-link-type="uri">http://www.kegg.jp/kegg/compound/</ext-link></p></fn>
<fn id="fn0004"><p><sup>4</sup><ext-link xlink:href="http://www.kegg.jp/kegg/pathway.html" ext-link-type="uri">http://www.kegg.jp/kegg/pathway.html</ext-link></p></fn>
</fn-group>
<ref-list>
<title>References</title>
<ref id="ref1"><label>1.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Feng</surname> <given-names>H</given-names></name> <name><surname>Feng</surname> <given-names>T</given-names></name> <name><surname>Mo</surname> <given-names>Y</given-names></name> <name><surname>Sun</surname> <given-names>S</given-names></name> <name><surname>Wang</surname> <given-names>L</given-names></name> <name><surname>Lu</surname> <given-names>C</given-names></name> <etal/></person-group>. <article-title>Integrated multi-omics analysis reveals insights into Chinese Forest musk deer (<italic>Moschus Berezovskii</italic>) genome evolution and musk synthesis. <italic>Front cell</italic></article-title>. <source>Dev Biol</source>. (<year>2023</year>) <volume>11</volume>:<fpage>11</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fcell.2023.1156138</pub-id>, PMID: <pub-id pub-id-type="pmid">37228656</pub-id></citation></ref>
<ref id="ref2"><label>2.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>K</given-names></name> <name><surname>Xie</surname> <given-names>L</given-names></name> <name><surname>Deng</surname> <given-names>M</given-names></name> <name><surname>Zhang</surname> <given-names>X</given-names></name> <name><surname>Luo</surname> <given-names>J</given-names></name> <name><surname>Li</surname> <given-names>X</given-names></name></person-group>. <article-title>Zoology, chemical composition, pharmacology, quality control and future perspective of musk (<italic>Moschus</italic>): a review</article-title>. <source>Chin Med</source>. (<year>2021</year>) <volume>16</volume>:<fpage>46</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s13020-021-00457-8</pub-id>, PMID: <pub-id pub-id-type="pmid">34147113</pub-id></citation></ref>
<ref id="ref3"><label>3.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gong</surname> <given-names>R</given-names></name> <name><surname>Song</surname> <given-names>S</given-names></name> <name><surname>Ai</surname> <given-names>Y</given-names></name> <name><surname>Wang</surname> <given-names>S</given-names></name> <name><surname>Dong</surname> <given-names>X</given-names></name> <name><surname>Ren</surname> <given-names>Z</given-names></name> <etal/></person-group>. <article-title>Exploring the growing Forest musk deer (<italic>Moschus Berezovskii</italic>) dietary protein requirement based on gut microbiome</article-title>. <source>Front Microbiol</source>. (<year>2023</year>) <volume>14</volume>:<fpage>1124163</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2023.1124163</pub-id>, PMID: <pub-id pub-id-type="pmid">36970665</pub-id></citation></ref>
<ref id="ref4"><label>4.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Feng</surname> <given-names>H</given-names></name> <name><surname>Wang</surname> <given-names>L</given-names></name> <name><surname>Cao</surname> <given-names>F</given-names></name> <name><surname>Ma</surname> <given-names>J</given-names></name> <name><surname>Tang</surname> <given-names>J</given-names></name> <name><surname>Feng</surname> <given-names>C</given-names></name> <etal/></person-group>. <article-title>Forest Musk Deer (<italic>Moschus Berezovskii</italic>) in China: research and protection</article-title>. <source>J Vertebr Biol</source>. (<year>2023</year>) <volume>72</volume>:<fpage>72</fpage>. doi: <pub-id pub-id-type="doi">10.25225/jvb.22067</pub-id></citation></ref>
<ref id="ref5"><label>5.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhao</surname> <given-names>Y</given-names></name> <name><surname>Wang</surname> <given-names>J</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Zhou</surname> <given-names>M</given-names></name> <name><surname>Weladji</surname> <given-names>RB</given-names></name> <name><surname>Bonoan</surname> <given-names>JT</given-names></name> <etal/></person-group>. <article-title>Temporal pattern of parturition in captive alpine musk deer (<italic>Moschus Sifanicus</italic>)</article-title>. <source>Biologia</source>. (<year>2020</year>) <volume>75</volume>:<fpage>259</fpage>&#x2013;<lpage>66</lpage>. doi: <pub-id pub-id-type="doi">10.2478/s11756-019-00293-0</pub-id></citation></ref>
<ref id="ref6"><label>6.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Qi</surname> <given-names>W-H</given-names></name> <name><surname>Li</surname> <given-names>J</given-names></name> <name><surname>Zhang</surname> <given-names>X-Y</given-names></name> <name><surname>Wang</surname> <given-names>Z-K</given-names></name> <name><surname>Li</surname> <given-names>X-X</given-names></name> <name><surname>Yang</surname> <given-names>C-Z</given-names></name> <etal/></person-group>. <article-title>The reproductive performance of female Forest musk deer (<italic>Moschus Berezovskii</italic>) in captivity</article-title>. <source>Theriogenology</source>. (<year>2011</year>) <volume>76</volume>:<fpage>874</fpage>&#x2013;<lpage>81</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.theriogenology.2011.04.018</pub-id>, PMID: <pub-id pub-id-type="pmid">21664670</pub-id></citation></ref>
<ref id="ref7"><label>7.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cai</surname> <given-names>Y</given-names></name> <name><surname>Yang</surname> <given-names>J</given-names></name> <name><surname>Wang</surname> <given-names>J</given-names></name> <name><surname>Yang</surname> <given-names>Y</given-names></name> <name><surname>Fu</surname> <given-names>W</given-names></name> <name><surname>Zheng</surname> <given-names>C</given-names></name> <etal/></person-group>. <article-title>Changes in the population genetic structure of captive Forest musk deer (<italic>Moschus Berezovskii</italic>) with the increasing number of generation under closed breeding conditions</article-title>. <source>Animals</source>. (<year>2020</year>) <volume>10</volume>:<fpage>255</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ani10020255</pub-id>, PMID: <pub-id pub-id-type="pmid">32033449</pub-id></citation></ref>
<ref id="ref8"><label>8.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tian</surname> <given-names>Q</given-names></name> <name><surname>Zhou</surname> <given-names>X</given-names></name> <name><surname>Cheng</surname> <given-names>J</given-names></name> <name><surname>Luo</surname> <given-names>Y</given-names></name> <name><surname>Dai</surname> <given-names>L</given-names></name> <name><surname>Zhao</surname> <given-names>W</given-names></name> <etal/></person-group>. <article-title>Genome sequence of lung pathogenic <italic>Escherichia Coli</italic> O78, a chimeric strain isolated from pneumonia Forest musk deer</article-title>. <source>Genes Genom</source>. (<year>2017</year>) <volume>39</volume>:<fpage>805</fpage>&#x2013;<lpage>15</lpage>. doi: <pub-id pub-id-type="doi">10.1007/s13258-017-0545-4</pub-id></citation></ref>
<ref id="ref9"><label>9.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Hu</surname> <given-names>X</given-names></name> <name><surname>Yang</surname> <given-names>S</given-names></name> <name><surname>Zhou</surname> <given-names>J</given-names></name> <name><surname>Qi</surname> <given-names>L</given-names></name> <name><surname>Sun</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>Comparison between the fecal bacterial microbiota of healthy and diarrheic captive musk deer</article-title>. <source>Front Microbiol</source>. (<year>2018</year>) <volume>9</volume>:<fpage>300</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2018.00300</pub-id>, PMID: <pub-id pub-id-type="pmid">29551996</pub-id></citation></ref>
<ref id="ref10"><label>10.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Montout</surname> <given-names>L</given-names></name> <name><surname>Poullet</surname> <given-names>N</given-names></name> <name><surname>Bambou</surname> <given-names>J-C</given-names></name></person-group>. <article-title>Systematic review of the interaction between nutrition and immunity in livestock: effect of dietary supplementation with synthetic amino acids</article-title>. <source>Animals</source>. (<year>2021</year>) <volume>11</volume>:<fpage>2813</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ani11102813</pub-id>, PMID: <pub-id pub-id-type="pmid">34679833</pub-id></citation></ref>
<ref id="ref11"><label>11.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhuang</surname> <given-names>W</given-names></name> <name><surname>Sun</surname> <given-names>N</given-names></name> <name><surname>Gu</surname> <given-names>C</given-names></name> <name><surname>Liu</surname> <given-names>S</given-names></name> <name><surname>Zheng</surname> <given-names>Y</given-names></name> <name><surname>Wang</surname> <given-names>H</given-names></name> <etal/></person-group>. <article-title>A literature review on <italic>Epimedium</italic>, a medicinal plant with promising slow aging properties</article-title>. <source>Heliyon</source>. (<year>2023</year>) <volume>9</volume>:<fpage>e21226</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.heliyon.2023.e21226</pub-id>, PMID: <pub-id pub-id-type="pmid">38027566</pub-id></citation></ref>
<ref id="ref12"><label>12.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>S-P</given-names></name> <name><surname>Li</surname> <given-names>Y-F</given-names></name> <name><surname>Zhang</surname> <given-names>D</given-names></name> <name><surname>Li</surname> <given-names>C-Y</given-names></name> <name><surname>Dai</surname> <given-names>X-F</given-names></name> <name><surname>Lan</surname> <given-names>D-F</given-names></name> <etal/></person-group>. <article-title>Pharmacological actions of the bioactive compounds of <italic>Epimedium</italic> on the male reproductive system: current status and future perspective</article-title>. <source>Asian J Androl</source>. (<year>2024</year>) <volume>26</volume>:<fpage>1</fpage>&#x2013;<lpage>10</lpage>. doi: <pub-id pub-id-type="doi">10.4103/aja20248</pub-id>, PMID: <pub-id pub-id-type="pmid">38978290</pub-id></citation></ref>
<ref id="ref13"><label>13.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bi</surname> <given-names>Z</given-names></name> <name><surname>Zhang</surname> <given-names>W</given-names></name> <name><surname>Yan</surname> <given-names>X</given-names></name></person-group>. <article-title>Anti-inflammatory and Immunoregulatory effects of icariin and Icaritin</article-title>. <source>Biomed Pharmacother</source>. (<year>2022</year>) <volume>151</volume>:<fpage>151</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.biopha.2022.113180</pub-id>, PMID: <pub-id pub-id-type="pmid">35676785</pub-id></citation></ref>
<ref id="ref14"><label>14.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tang</surname> <given-names>Z-S</given-names></name> <name><surname>Liu</surname> <given-names>Y-R</given-names></name> <name><surname>Lv</surname> <given-names>Y</given-names></name> <name><surname>Duan</surname> <given-names>J-A</given-names></name> <name><surname>Chen</surname> <given-names>S-Z</given-names></name> <name><surname>Sun</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Quality markers of animal medicinal materials: correlative analysis of musk reveals distinct metabolic changes induced by multiple factors</article-title>. <source>Phytomedicine</source>. (<year>2018</year>) <volume>44</volume>:<fpage>258</fpage>&#x2013;<lpage>69</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.phymed.2018.03.008</pub-id>, PMID: <pub-id pub-id-type="pmid">29551642</pub-id></citation></ref>
<ref id="ref15"><label>15.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xu</surname> <given-names>Q</given-names></name> <name><surname>Wells</surname> <given-names>CC</given-names></name> <name><surname>Garman</surname> <given-names>JH</given-names></name> <name><surname>Asico</surname> <given-names>L</given-names></name> <name><surname>Escano</surname> <given-names>CS</given-names></name> <name><surname>Maric</surname> <given-names>C</given-names></name></person-group>. <article-title>Imbalance in sex hormone levels exacerbates diabetic renal disease</article-title>. <source>Hypertension</source>. (<year>2008</year>) <volume>51</volume>:<fpage>1218</fpage>&#x2013;<lpage>24</lpage>. doi: <pub-id pub-id-type="doi">10.1161/hypertensionaha.107.100594</pub-id>, PMID: <pub-id pub-id-type="pmid">18259041</pub-id></citation></ref>
<ref id="ref16"><label>16.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Szabo</surname> <given-names>R</given-names></name> <name><surname>Racz</surname> <given-names>CP</given-names></name> <name><surname>Dulf</surname> <given-names>FV</given-names></name></person-group>. <article-title>Bioavailability improvement strategies for icariin and its Derivates: a review</article-title>. <source>Int J Mol Sci</source>. (<year>2022</year>) <volume>23</volume>:<fpage>7519</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ijms23147519</pub-id>, PMID: <pub-id pub-id-type="pmid">35886867</pub-id></citation></ref>
<ref id="ref17"><label>17.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>Y</given-names></name> <name><surname>Zhang</surname> <given-names>C</given-names></name> <name><surname>Li</surname> <given-names>Z</given-names></name> <name><surname>Zeng</surname> <given-names>C</given-names></name> <name><surname>Xue</surname> <given-names>Z</given-names></name> <name><surname>Li</surname> <given-names>E</given-names></name> <etal/></person-group>. <article-title>New 8-Prenylated quercetin glycosides from the flowers of <italic>Epimedium</italic> Acuminatum and their testosterone production-promoting activities</article-title>. <source>Front Chem</source>. (<year>2022</year>) <volume>10</volume>:<fpage>10</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fchem.2022.1014110</pub-id>, PMID: <pub-id pub-id-type="pmid">36300020</pub-id></citation></ref>
<ref id="ref18"><label>18.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lee</surname> <given-names>W-J</given-names></name> <name><surname>Hase</surname> <given-names>K</given-names></name></person-group>. <article-title>Gut microbiota-generated metabolites in animal health and disease</article-title>. <source>Nat Chem Biol</source>. (<year>2014</year>) <volume>10</volume>:<fpage>416</fpage>&#x2013;<lpage>24</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nchembio.1535</pub-id>, PMID: <pub-id pub-id-type="pmid">24838170</pub-id></citation></ref>
<ref id="ref19"><label>19.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>S</given-names></name> <name><surname>Luo</surname> <given-names>S</given-names></name> <name><surname>Yan</surname> <given-names>C</given-names></name></person-group>. <article-title>Gut microbiota implications for health and welfare in farm animals: a review</article-title>. <source>Animals</source>. (<year>2022</year>) <volume>12</volume>:<fpage>93</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ani12010093</pub-id>, PMID: <pub-id pub-id-type="pmid">35011199</pub-id></citation></ref>
<ref id="ref20"><label>20.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Li</surname> <given-names>B</given-names></name> <name><surname>Xiang</surname> <given-names>T</given-names></name> <name><surname>Bindawa Isah</surname> <given-names>M</given-names></name> <name><surname>Chen</surname> <given-names>C</given-names></name> <name><surname>Zhang</surname> <given-names>X</given-names></name></person-group>. <article-title>In vitro simulated saliva, gastric, and intestinal digestion followed by Faecal fermentation reveals a potential modulatory activity of <italic>Epimedium</italic> on human gut microbiota</article-title>. <source>J Pharm Biomed Anal</source>. (<year>2024</year>) <volume>245</volume>:<fpage>116151</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.jpba.2024.116151</pub-id>, PMID: <pub-id pub-id-type="pmid">38652940</pub-id></citation></ref>
<ref id="ref21"><label>21.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>J</given-names></name> <name><surname>Yu</surname> <given-names>H</given-names></name> <name><surname>Zhang</surname> <given-names>H</given-names></name> <name><surname>Zhao</surname> <given-names>Q</given-names></name> <name><surname>Si</surname> <given-names>W</given-names></name> <name><surname>Qin</surname> <given-names>Y</given-names></name> <etal/></person-group>. <article-title>Dietary <italic>Epimedium</italic> extract supplementation improves intestinal functions and alters gut microbiota in broilers</article-title>. <source>J Anim Sci Biotechnol</source>. (<year>2023</year>) <volume>14</volume>:<fpage>14</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s40104-022-00812-1</pub-id>, PMID: <pub-id pub-id-type="pmid">36653873</pub-id></citation></ref>
<ref id="ref22"><label>22.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pan</surname> <given-names>S</given-names></name> <name><surname>Chen</surname> <given-names>A</given-names></name> <name><surname>Han</surname> <given-names>Z</given-names></name> <name><surname>Wang</surname> <given-names>Y</given-names></name> <name><surname>Lu</surname> <given-names>X</given-names></name> <name><surname>Yang</surname> <given-names>Y</given-names></name></person-group>. <article-title>1h Nmr-based Metabonomic study on the effects of <italic>Epimedium</italic> on glucocorticoid-induced osteoporosis</article-title>. <source>J Chromatogr B</source>. (<year>2016</year>) <volume>1038</volume>:<fpage>118</fpage>&#x2013;<lpage>26</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.jchromb.2016.10.015</pub-id>, PMID: <pub-id pub-id-type="pmid">27810280</pub-id></citation></ref>
<ref id="ref23"><label>23.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yang</surname> <given-names>X-H</given-names></name> <name><surname>Li</surname> <given-names>L</given-names></name> <name><surname>Xue</surname> <given-names>Y-B</given-names></name> <name><surname>Zhou</surname> <given-names>X-X</given-names></name> <name><surname>Tang</surname> <given-names>J-H</given-names></name></person-group>. <article-title>Flavonoids from <italic>Epimedium</italic> Pubescens: extraction and mechanism, antioxidant capacity and effects on cat and Gsh-Px of <italic>Drosophila Melanogaster</italic></article-title>. <source>PeerJ</source>. (<year>2020</year>) <volume>8</volume>:<fpage>e8361</fpage>. doi: <pub-id pub-id-type="doi">10.7717/peerj.8361</pub-id>, PMID: <pub-id pub-id-type="pmid">31998556</pub-id></citation></ref>
<ref id="ref24"><label>24.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>J</given-names></name> <name><surname>Kobert</surname> <given-names>K</given-names></name> <name><surname>Flouri</surname> <given-names>T</given-names></name> <name><surname>Stamatakis</surname> <given-names>A</given-names></name></person-group>. <article-title>Pear: a fast and accurate Illumina paired-end read merger</article-title>. <source>Bioinformatics</source>. (<year>2014</year>) <volume>30</volume>:<fpage>614</fpage>&#x2013;<lpage>20</lpage>. doi: <pub-id pub-id-type="doi">10.1093/bioinformatics/btt593</pub-id>, PMID: <pub-id pub-id-type="pmid">24142950</pub-id></citation></ref>
<ref id="ref25"><label>25.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rognes</surname> <given-names>T</given-names></name> <name><surname>Flouri</surname> <given-names>T</given-names></name> <name><surname>Nichols</surname> <given-names>B</given-names></name> <name><surname>Quince</surname> <given-names>C</given-names></name> <name><surname>Mahe</surname> <given-names>F</given-names></name></person-group>. <article-title>Vsearch: a versatile open source tool for metagenomics</article-title>. <source>PeerJ</source>. (<year>2016</year>) <volume>4</volume>:<fpage>e2584</fpage>. doi: <pub-id pub-id-type="doi">10.7717/peerj.2584</pub-id>, PMID: <pub-id pub-id-type="pmid">27781170</pub-id></citation></ref>
<ref id="ref26"><label>26.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pruesse</surname> <given-names>E</given-names></name> <name><surname>Quast</surname> <given-names>C</given-names></name> <name><surname>Knittel</surname> <given-names>K</given-names></name> <name><surname>Fuchs</surname> <given-names>BM</given-names></name> <name><surname>Ludwig</surname> <given-names>W</given-names></name> <name><surname>Peplies</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Silva: a comprehensive online resource for quality checked and aligned ribosomal Rna sequence data compatible with arb</article-title>. <source>Nucleic Acids Res</source>. (<year>2007</year>) <volume>35</volume>:<fpage>7188</fpage>&#x2013;<lpage>96</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/gkm864</pub-id>, PMID: <pub-id pub-id-type="pmid">17947321</pub-id></citation></ref>
<ref id="ref27"><label>27.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ye</surname> <given-names>J</given-names></name> <name><surname>McGinnis</surname> <given-names>S</given-names></name> <name><surname>Madden</surname> <given-names>TL</given-names></name></person-group>. <article-title>Blast: improvements for better sequence analysis</article-title>. <source>Nucleic Acids Res</source>. (<year>2006</year>) <volume>34</volume>:<fpage>W6</fpage>&#x2013;<lpage>9</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/gkl164</pub-id>, PMID: <pub-id pub-id-type="pmid">16845079</pub-id></citation></ref>
<ref id="ref28"><label>28.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hall</surname> <given-names>M</given-names></name> <name><surname>Beiko</surname> <given-names>RG</given-names></name></person-group>. <article-title>16s Rrna gene analysis with Qiime2</article-title>. <source>Methods Mol Biol</source>. (<year>2018</year>) <volume>1849</volume>:<fpage>113</fpage>&#x2013;<lpage>29</lpage>. doi: <pub-id pub-id-type="doi">10.1007/978-1-4939-8728-3_8</pub-id></citation></ref>
<ref id="ref29"><label>29.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Copeland</surname> <given-names>WK</given-names></name> <name><surname>Krishnan</surname> <given-names>V</given-names></name> <name><surname>Beck</surname> <given-names>D</given-names></name> <name><surname>Settles</surname> <given-names>M</given-names></name> <name><surname>Foster</surname> <given-names>JA</given-names></name> <name><surname>Cho</surname> <given-names>K-C</given-names></name> <etal/></person-group>. <article-title>Mcagui: microbial community analysis R-graphical user Interface (Gui)</article-title>. <source>Bioinformatics</source>. (<year>2012</year>) <volume>28</volume>:<fpage>2198</fpage>&#x2013;<lpage>9</lpage>. doi: <pub-id pub-id-type="doi">10.1093/bioinformatics/bts338</pub-id>, PMID: <pub-id pub-id-type="pmid">22692220</pub-id></citation></ref>
<ref id="ref30"><label>30.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Segata</surname> <given-names>N</given-names></name> <name><surname>Izard</surname> <given-names>J</given-names></name> <name><surname>Waldron</surname> <given-names>L</given-names></name> <name><surname>Gevers</surname> <given-names>D</given-names></name> <name><surname>Miropolsky</surname> <given-names>L</given-names></name> <name><surname>Garrett</surname> <given-names>WS</given-names></name> <etal/></person-group>. <article-title>Metagenomic biomarker discovery and explanation</article-title>. <source>Genome Biol</source>. (<year>2011</year>) <volume>12</volume>:<fpage>R60</fpage>. doi: <pub-id pub-id-type="doi">10.1186/gb-2011-12-6-r60</pub-id>, PMID: <pub-id pub-id-type="pmid">21702898</pub-id></citation></ref>
<ref id="ref31"><label>31.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liao</surname> <given-names>J</given-names></name> <name><surname>Zhang</surname> <given-names>Y</given-names></name> <name><surname>Zhang</surname> <given-names>W</given-names></name> <name><surname>Zeng</surname> <given-names>Y</given-names></name> <name><surname>Zhao</surname> <given-names>J</given-names></name> <name><surname>Zhang</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Different software processing affects the peak picking and metabolic pathway recognition of metabolomics data</article-title>. <source>J Chromatogr A</source>. (<year>2023</year>) <volume>1687</volume>:<fpage>1687</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.chroma.2022.463700</pub-id>, PMID: <pub-id pub-id-type="pmid">36508769</pub-id></citation></ref>
<ref id="ref32"><label>32.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>X</given-names></name> <name><surname>Zhou</surname> <given-names>S</given-names></name> <name><surname>Liang</surname> <given-names>Y</given-names></name> <name><surname>Xie</surname> <given-names>G</given-names></name> <name><surname>Zhu</surname> <given-names>M</given-names></name> <name><surname>Wang</surname> <given-names>Z</given-names></name> <etal/></person-group>. <article-title>Effects of Astragalus, Epimedium, and Fructus Ligustri Lucidi extractive on antioxidant capacity, production performance, and immune mechanism of breeding pigeons under stress</article-title>. <source>Poult Sci</source>. (<year>2023</year>) <volume>102</volume>:<fpage>102350</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.psj.2022.102350</pub-id></citation></ref>
<ref id="ref33"><label>33.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Guo</surname> <given-names>Y</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Zhang</surname> <given-names>S</given-names></name> <name><surname>Wu</surname> <given-names>X</given-names></name> <name><surname>Jiang</surname> <given-names>L</given-names></name> <name><surname>Zhao</surname> <given-names>Q</given-names></name> <etal/></person-group>. <article-title>The effect of Total flavonoids of Epimedium on granulosa cell development in laying hens</article-title>. <source>Poult Sci</source>. (<year>2020</year>) <volume>99</volume>:<fpage>4598</fpage>&#x2013;<lpage>606</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.psj.2020.05.032</pub-id>, PMID: <pub-id pub-id-type="pmid">32868004</pub-id></citation></ref>
<ref id="ref34"><label>34.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>J</given-names></name> <name><surname>Yan</surname> <given-names>P</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Yu</surname> <given-names>J</given-names></name> <name><surname>Huang</surname> <given-names>Y</given-names></name> <name><surname>Bai</surname> <given-names>R</given-names></name> <etal/></person-group>. <article-title>Gut microbiota and serum metabolome reveal the mechanism by which Tcm polysaccharides alleviate Salpingitis in laying hens challenged by Bacteria</article-title>. <source>Poult Sci</source>. (<year>2024</year>) <volume>103</volume>:<fpage>103288</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.psj.2023.103288</pub-id>, PMID: <pub-id pub-id-type="pmid">38064885</pub-id></citation></ref>
<ref id="ref35"><label>35.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sun</surname> <given-names>X</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Li</surname> <given-names>J</given-names></name> <name><surname>Liang</surname> <given-names>H</given-names></name> <name><surname>Zhang</surname> <given-names>J</given-names></name> <name><surname>Chen</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>Bioactive metabolites reveal the therapeutic consistency of Epimedii folium from multi-plant sources for the treatment of kidney-Yang deficiency</article-title>. <source>J Ethnopharmacol</source>. (<year>2024</year>) <volume>319</volume>:<fpage>319</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.jep.2023.117215</pub-id>, PMID: <pub-id pub-id-type="pmid">37774896</pub-id></citation></ref>
<ref id="ref36"><label>36.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Munir</surname> <given-names>N</given-names></name> <name><surname>Mahmood</surname> <given-names>Z</given-names></name> <name><surname>Yameen</surname> <given-names>M</given-names></name> <name><surname>Mustafa</surname> <given-names>G</given-names></name></person-group>. <article-title>Therapeutic response of Epimedium Gandiflorum's different doses to restore the antioxidant potential and reproductive hormones in male albino rats</article-title>. <source>Dose-Response</source>. (<year>2020</year>) <volume>18</volume>:<fpage>1559325820959563</fpage>. doi: <pub-id pub-id-type="doi">10.1177/1559325820959563</pub-id>, PMID: <pub-id pub-id-type="pmid">32973420</pub-id></citation></ref>
<ref id="ref37"><label>37.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bo</surname> <given-names>X</given-names></name> <name><surname>Chen</surname> <given-names>J</given-names></name> <name><surname>Mu</surname> <given-names>J</given-names></name> <name><surname>Dong</surname> <given-names>X</given-names></name> <name><surname>Ren</surname> <given-names>Z</given-names></name> <name><surname>Liu</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Quercetin promotes the secretion of musk by regulating the hormone level and microbial structure of Forest musk deer</article-title>. <source>Integr Zool</source>. (<year>2024</year>) <volume>19</volume>:<fpage>596</fpage>&#x2013;<lpage>611</lpage>. doi: <pub-id pub-id-type="doi">10.1111/1749-4877.12763</pub-id>, PMID: <pub-id pub-id-type="pmid">37789560</pub-id></citation></ref>
<ref id="ref38"><label>38.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jie</surname> <given-names>H</given-names></name> <name><surname>Feng</surname> <given-names>X-L</given-names></name> <name><surname>Zhao</surname> <given-names>G-J</given-names></name> <name><surname>Zeng</surname> <given-names>D-J</given-names></name> <name><surname>Zhang</surname> <given-names>C-L</given-names></name> <name><surname>Chen</surname> <given-names>Q</given-names></name></person-group>. <article-title>Research Progress on musk secretion mechanism of Forest musk deer</article-title>. <source>Zhongguo Zhong Yao Za Zhi</source>. (<year>2014</year>) <volume>39</volume>:<fpage>4522</fpage>&#x2013;<lpage>5</lpage>. PMID: <pub-id pub-id-type="pmid">25911794</pub-id></citation></ref>
<ref id="ref39"><label>39.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fang</surname> <given-names>M</given-names></name> <name><surname>Zhang</surname> <given-names>M</given-names></name> <name><surname>Shi</surname> <given-names>M</given-names></name> <name><surname>Zhang</surname> <given-names>T</given-names></name> <name><surname>Qi</surname> <given-names>L</given-names></name> <name><surname>Yu</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Sex hormones play roles in determining musk composition during the early stages of musk secretion by musk deer (<italic>Moschus Berezovskii</italic>)</article-title>. <source>Endocr J</source>. (<year>2018</year>) <volume>65</volume>:<fpage>1111</fpage>&#x2013;<lpage>20</lpage>. doi: <pub-id pub-id-type="doi">10.1507/endocrj.EJ18-0211</pub-id>, PMID: <pub-id pub-id-type="pmid">30175720</pub-id></citation></ref>
<ref id="ref40"><label>40.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jin</surname> <given-names>Q</given-names></name> <name><surname>Cheng</surname> <given-names>L</given-names></name> <name><surname>Zhu</surname> <given-names>Y</given-names></name> <name><surname>Zhao</surname> <given-names>X</given-names></name> <name><surname>Zhang</surname> <given-names>W</given-names></name> <name><surname>Gao</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>Immune-related effects of compound Astragalus polysaccharide and sulfated Epimedium polysaccharide on newborn piglets</article-title>. <source>Anim Biotechnol</source>. (<year>2021</year>) <volume>34</volume>:<fpage>508</fpage>&#x2013;<lpage>19</lpage>. doi: <pub-id pub-id-type="doi">10.1080/10495398.2021.1979022</pub-id>, PMID: <pub-id pub-id-type="pmid">34550852</pub-id></citation></ref>
<ref id="ref41"><label>41.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jiang</surname> <given-names>Y</given-names></name> <name><surname>Han</surname> <given-names>X</given-names></name> <name><surname>Li</surname> <given-names>M</given-names></name> <name><surname>Feng</surname> <given-names>N</given-names></name> <name><surname>Yang</surname> <given-names>P</given-names></name> <name><surname>Zhao</surname> <given-names>H</given-names></name> <etal/></person-group>. <article-title>Changes in the gut microbiota of Forest musk deer (<italic>Moschus Berezovskii</italic>) during ex situ conservation</article-title>. <source>Front Microbiol</source>. (<year>2022</year>) <volume>13</volume>:<fpage>13</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2022.969593</pub-id>, PMID: <pub-id pub-id-type="pmid">36160192</pub-id></citation></ref>
<ref id="ref42"><label>42.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hu</surname> <given-names>X</given-names></name> <name><surname>Liu</surname> <given-names>G</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Wei</surname> <given-names>Y</given-names></name> <name><surname>Lin</surname> <given-names>S</given-names></name> <name><surname>Liu</surname> <given-names>S</given-names></name> <etal/></person-group>. <article-title>High-throughput analysis reveals seasonal variation of the gut microbiota composition within Forest musk deer (<italic>Moschus Berezovskii</italic>)</article-title>. <source>Front Microbiol</source>. (<year>2018</year>) <volume>9</volume>:<fpage>9</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2018.00009</pub-id>, PMID: <pub-id pub-id-type="pmid">29387050</pub-id></citation></ref>
<ref id="ref43"><label>43.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kapoor</surname> <given-names>P</given-names></name> <name><surname>Tiwari</surname> <given-names>A</given-names></name> <name><surname>Sharma</surname> <given-names>S</given-names></name> <name><surname>Tiwari</surname> <given-names>V</given-names></name> <name><surname>Sheoran</surname> <given-names>B</given-names></name> <name><surname>Ali</surname> <given-names>U</given-names></name> <etal/></person-group>. <article-title>Effect of anthocyanins on gut health markers, Firmicutes-Bacteroidetes ratio and short-chain fatty acids: a systematic review via Meta-analysis</article-title>. <source>Sci Rep</source>. (<year>2023</year>) <volume>13</volume>:<fpage>1729</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41598-023-28764-0</pub-id>, PMID: <pub-id pub-id-type="pmid">36720989</pub-id></citation></ref>
<ref id="ref44"><label>44.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Natividad</surname> <given-names>JM</given-names></name> <name><surname>Pinto-Sanchez</surname> <given-names>MI</given-names></name> <name><surname>Galipeau</surname> <given-names>HJ</given-names></name> <name><surname>Jury</surname> <given-names>J</given-names></name> <name><surname>Jordana</surname> <given-names>M</given-names></name> <name><surname>Reinisch</surname> <given-names>W</given-names></name> <etal/></person-group>. <article-title>Ecobiotherapy rich in Firmicutes decreases susceptibility to colitis in a humanized Gnotobiotic mouse model</article-title>. <source>Inflamm Bowel Dis</source>. (<year>2015</year>) <volume>21</volume>:<fpage>1883</fpage>&#x2013;<lpage>93</lpage>. doi: <pub-id pub-id-type="doi">10.1097/mib.0000000000000422</pub-id>, PMID: <pub-id pub-id-type="pmid">26060932</pub-id></citation></ref>
<ref id="ref45"><label>45.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>G</given-names></name> <name><surname>Hu</surname> <given-names>P</given-names></name> <name><surname>Xu</surname> <given-names>Z</given-names></name> <name><surname>Peng</surname> <given-names>C</given-names></name> <name><surname>Wang</surname> <given-names>Y</given-names></name> <name><surname>Wan</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>The beneficial or detrimental fluoride to gut microbiota depends on its dosages</article-title>. <source>Ecotoxicol Environ Saf</source>. (<year>2021</year>) <volume>209</volume>:<fpage>111732</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.ecoenv.2020.111732</pub-id>, PMID: <pub-id pub-id-type="pmid">33373928</pub-id></citation></ref>
<ref id="ref46"><label>46.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rizzatti</surname> <given-names>G</given-names></name> <name><surname>Lopetuso</surname> <given-names>LR</given-names></name> <name><surname>Gibiino</surname> <given-names>G</given-names></name> <name><surname>Binda</surname> <given-names>C</given-names></name> <name><surname>Gasbarrini</surname> <given-names>A</given-names></name></person-group>. <article-title>Proteobacteria: a common factor in human diseases</article-title>. <source>Biomed Res Int</source>. (<year>2017</year>) <volume>2017</volume>:<fpage>1</fpage>&#x2013;<lpage>7</lpage>. doi: <pub-id pub-id-type="doi">10.1155/2017/9351507</pub-id>, PMID: <pub-id pub-id-type="pmid">29230419</pub-id></citation></ref>
<ref id="ref47"><label>47.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shin</surname> <given-names>N-R</given-names></name> <name><surname>Whon</surname> <given-names>TW</given-names></name> <name><surname>Bae</surname> <given-names>J-W</given-names></name></person-group>. <article-title>Proteobacteria: microbial signature of Dysbiosis in gut microbiota</article-title>. <source>Trends Biotechnol</source>. (<year>2015</year>) <volume>33</volume>:<fpage>496</fpage>&#x2013;<lpage>503</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.tibtech.2015.06.011</pub-id>, PMID: <pub-id pub-id-type="pmid">26210164</pub-id></citation></ref>
<ref id="ref48"><label>48.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yoshida</surname> <given-names>N</given-names></name> <name><surname>Yamashita</surname> <given-names>T</given-names></name> <name><surname>Kishino</surname> <given-names>S</given-names></name> <name><surname>Watanabe</surname> <given-names>H</given-names></name> <name><surname>Sasaki</surname> <given-names>K</given-names></name> <name><surname>Sasaki</surname> <given-names>D</given-names></name> <etal/></person-group>. <article-title>A possible beneficial effect of <italic>Bacteroides</italic> on Faecal lipopolysaccharide activity and cardiovascular diseases</article-title>. <source>Sci Rep</source>. (<year>2020</year>) <volume>10</volume>:<fpage>13009</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41598-020-69983-z</pub-id>, PMID: <pub-id pub-id-type="pmid">32747669</pub-id></citation></ref>
<ref id="ref49"><label>49.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cheng</surname> <given-names>J</given-names></name> <name><surname>Hu</surname> <given-names>J</given-names></name> <name><surname>Geng</surname> <given-names>F</given-names></name> <name><surname>Nie</surname> <given-names>S</given-names></name></person-group>. <article-title>Bacteroides utilization for dietary polysaccharides and their beneficial effects on gut health</article-title>. <source>Food Sci Hum Wellness</source>. (<year>2022</year>) <volume>11</volume>:<fpage>1101</fpage>&#x2013;<lpage>10</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.fshw.2022.04.002</pub-id></citation></ref>
<ref id="ref50"><label>50.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Deng</surname> <given-names>L</given-names></name> <name><surname>Chen</surname> <given-names>S</given-names></name> <name><surname>Meng</surname> <given-names>W</given-names></name> <name><surname>Zhou</surname> <given-names>Z</given-names></name> <name><surname>Liu</surname> <given-names>H</given-names></name> <name><surname>Zhong</surname> <given-names>Z</given-names></name> <etal/></person-group>. <article-title>Changes in gut microbiota composition associated with the presence of enteric Protist Blastocystis in captive Forest musk deer (<italic>Moschus Berezovskii</italic>)</article-title>. <source>Microbiol Spectr</source>. (<year>2022</year>) <volume>10</volume>:<fpage>e0226921</fpage>. doi: <pub-id pub-id-type="doi">10.1128/spectrum.02269-21</pub-id>, PMID: <pub-id pub-id-type="pmid">35736237</pub-id></citation></ref>
<ref id="ref51"><label>51.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Huo</surname> <given-names>S</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Guo</surname> <given-names>Y</given-names></name> <name><surname>Zhang</surname> <given-names>S</given-names></name> <name><surname>Li</surname> <given-names>P</given-names></name> <name><surname>Gao</surname> <given-names>P</given-names></name></person-group>. <article-title>Improving effects of <italic>Epimedium</italic> flavonoids on the selected reproductive features in layer hens after forced molting</article-title>. <source>Poult Sci</source>. (<year>2020</year>) <volume>99</volume>:<fpage>2757</fpage>&#x2013;<lpage>65</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.psj.2019.12.053</pub-id>, PMID: <pub-id pub-id-type="pmid">32359613</pub-id></citation></ref>
<ref id="ref52"><label>52.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>Y</given-names></name> <name><surname>Yang</surname> <given-names>P</given-names></name> <name><surname>Chen</surname> <given-names>T</given-names></name> <name><surname>Hu</surname> <given-names>J</given-names></name> <name><surname>An</surname> <given-names>X</given-names></name> <name><surname>Yao</surname> <given-names>C</given-names></name> <etal/></person-group>. <article-title>Analysis and comparison of blood metabolome of Forest musk deer in musk secretion and non-secretion periods</article-title>. <source>Sci Rep</source>. (<year>2024</year>) <volume>14</volume>:<fpage>16980</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41598-024-67981-z</pub-id>, PMID: <pub-id pub-id-type="pmid">39043795</pub-id></citation></ref>
<ref id="ref53"><label>53.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yi</surname> <given-names>L</given-names></name> <name><surname>Dalai</surname> <given-names>M</given-names></name> <name><surname>Su</surname> <given-names>R</given-names></name> <name><surname>Lin</surname> <given-names>W</given-names></name> <name><surname>Erdenedalai</surname> <given-names>M</given-names></name> <name><surname>Luvsantseren</surname> <given-names>B</given-names></name> <etal/></person-group>. <article-title>Whole-genome sequencing of wild Siberian musk deer (<italic>Moschus Moschiferus</italic>) provides insights into its genetic features</article-title>. <source>BMC Genomics</source>. (<year>2020</year>) <volume>21</volume>:<fpage>108</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s12864-020-6495-2</pub-id>, PMID: <pub-id pub-id-type="pmid">32005147</pub-id></citation></ref>
<ref id="ref54"><label>54.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>M</given-names></name> <name><surname>Luo</surname> <given-names>J</given-names></name> <name><surname>Ji</surname> <given-names>H</given-names></name> <name><surname>Song</surname> <given-names>W</given-names></name> <name><surname>Zhang</surname> <given-names>D</given-names></name> <name><surname>Su</surname> <given-names>W</given-names></name> <etal/></person-group>. <article-title>The preventive mechanism of anserine on Tert-butyl Hydroperoxide-induced liver injury in L-02 cells via regulating the Keap1-Nrf2 and Jnk-Caspase-3 signaling pathways</article-title>. <source>Mar Drugs</source>. (<year>2023</year>) <volume>21</volume>:<fpage>477</fpage>. doi: <pub-id pub-id-type="doi">10.3390/md21090477</pub-id>, PMID: <pub-id pub-id-type="pmid">37755089</pub-id></citation></ref>
<ref id="ref55"><label>55.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kasamatsu</surname> <given-names>S</given-names></name> <name><surname>Komae</surname> <given-names>S</given-names></name> <name><surname>Matsukura</surname> <given-names>K</given-names></name> <name><surname>Kakihana</surname> <given-names>Y</given-names></name> <name><surname>Uchida</surname> <given-names>K</given-names></name> <name><surname>Ihara</surname> <given-names>H</given-names></name></person-group>. <article-title>2-Oxo-imidazole-containing dipeptides play a key role in the antioxidant capacity of imidazole-containing dipeptides</article-title>. <source>Antioxidants</source>. (<year>2021</year>) <volume>10</volume>:<fpage>1434</fpage>. doi: <pub-id pub-id-type="doi">10.3390/antiox10091434</pub-id>, PMID: <pub-id pub-id-type="pmid">34573066</pub-id></citation></ref>
<ref id="ref56"><label>56.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>M</given-names></name> <name><surname>Ji</surname> <given-names>H</given-names></name> <name><surname>Song</surname> <given-names>W</given-names></name> <name><surname>Zhang</surname> <given-names>D</given-names></name> <name><surname>Su</surname> <given-names>W</given-names></name> <name><surname>Liu</surname> <given-names>S</given-names></name></person-group>. <article-title>Anserine beneficial effects in Hyperuricemic rats by inhibiting Xod, regulating uric acid transporter and repairing Hepatorenal injury</article-title>. <source>Food Funct</source>. (<year>2022</year>) <volume>13</volume>:<fpage>9434</fpage>&#x2013;<lpage>42</lpage>. doi: <pub-id pub-id-type="doi">10.1039/d2fo01533a</pub-id>, PMID: <pub-id pub-id-type="pmid">35972268</pub-id></citation></ref>
<ref id="ref57"><label>57.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Moro</surname> <given-names>J</given-names></name> <name><surname>Tome</surname> <given-names>D</given-names></name> <name><surname>Schmidely</surname> <given-names>P</given-names></name> <name><surname>Demersay</surname> <given-names>T-C</given-names></name> <name><surname>Azzout-Marniche</surname> <given-names>D</given-names></name></person-group>. <article-title>Histidine: a systematic review on metabolism and physiological effects in human and different animal species</article-title>. <source>Nutrients</source>. (<year>2020</year>) <volume>12</volume>:<fpage>1414</fpage>. doi: <pub-id pub-id-type="doi">10.3390/nu12051414</pub-id>, PMID: <pub-id pub-id-type="pmid">32423010</pub-id></citation></ref>
<ref id="ref58"><label>58.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Holecek</surname> <given-names>M</given-names></name></person-group>. <article-title>Histidine in health and disease: metabolism, physiological importance, and use as a supplement</article-title>. <source>Nutrients</source>. (<year>2020</year>) <volume>12</volume>:<fpage>848</fpage>. doi: <pub-id pub-id-type="doi">10.3390/nu12030848</pub-id>, PMID: <pub-id pub-id-type="pmid">32235743</pub-id></citation></ref>
<ref id="ref59"><label>59.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kopec</surname> <given-names>W</given-names></name> <name><surname>Jamroz</surname> <given-names>D</given-names></name> <name><surname>Wiliczkiewicz</surname> <given-names>A</given-names></name> <name><surname>Biazik</surname> <given-names>E</given-names></name> <name><surname>Pudlo</surname> <given-names>A</given-names></name> <name><surname>Korzeniowska</surname> <given-names>M</given-names></name> <etal/></person-group>. <article-title>Antioxidative characteristics of chicken breast meat and blood after diet supplementation with carnosine, L-histidine, and &#x0392;-alanine</article-title>. <source>Antioxidants</source>. (<year>2020</year>) <volume>9</volume>:<fpage>1093</fpage>. doi: <pub-id pub-id-type="doi">10.3390/antiox9111093</pub-id>, PMID: <pub-id pub-id-type="pmid">33171823</pub-id></citation></ref>
<ref id="ref60"><label>60.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Qi</surname> <given-names>B</given-names></name> <name><surname>Wang</surname> <given-names>J</given-names></name> <name><surname>Hu</surname> <given-names>M</given-names></name> <name><surname>Ma</surname> <given-names>Y</given-names></name> <name><surname>Wu</surname> <given-names>S</given-names></name> <name><surname>Qi</surname> <given-names>G</given-names></name> <etal/></person-group>. <article-title>Influences of Beta-alanine and L-histidine supplementation on growth performance, meat quality, carnosine content, and Mrna expression of carnosine-related enzymes in broilers</article-title>. <source>Animals</source>. (<year>2021</year>) <volume>11</volume>:<fpage>2265</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ani11082265</pub-id>, PMID: <pub-id pub-id-type="pmid">34438723</pub-id></citation></ref>
<ref id="ref61"><label>61.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhu</surname> <given-names>Q</given-names></name> <name><surname>Wu</surname> <given-names>Y</given-names></name> <name><surname>Mai</surname> <given-names>J</given-names></name> <name><surname>Guo</surname> <given-names>G</given-names></name> <name><surname>Meng</surname> <given-names>J</given-names></name> <name><surname>Fang</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>Comprehensive metabolic profiling of inflammation indicated key roles of Glycerophospholipid and arginine metabolism in coronary artery disease</article-title>. <source>Front Immunol</source>. (<year>2022</year>) <volume>13</volume>:<fpage>13</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fimmu.2022.829425</pub-id>, PMID: <pub-id pub-id-type="pmid">35371012</pub-id></citation></ref>
<ref id="ref62"><label>62.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xiao</surname> <given-names>S-S</given-names></name> <name><surname>Mi</surname> <given-names>J-D</given-names></name> <name><surname>Mei</surname> <given-names>L</given-names></name> <name><surname>Liang</surname> <given-names>J</given-names></name> <name><surname>Feng</surname> <given-names>K-X</given-names></name> <name><surname>Wu</surname> <given-names>Y-B</given-names></name> <etal/></person-group>. <article-title>Microbial diversity and community variation in the intestines of layer chickens</article-title>. <source>Animals</source>. (<year>2021</year>) <volume>11</volume>:<fpage>840</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ani11030840</pub-id>, PMID: <pub-id pub-id-type="pmid">33809729</pub-id></citation></ref>
<ref id="ref63"><label>63.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Harrison</surname> <given-names>CA</given-names></name> <name><surname>Laubitz</surname> <given-names>D</given-names></name> <name><surname>Ohland</surname> <given-names>CL</given-names></name> <name><surname>Midura-Kiela</surname> <given-names>MT</given-names></name> <name><surname>Patil</surname> <given-names>K</given-names></name> <name><surname>Besselsen</surname> <given-names>DG</given-names></name> <etal/></person-group>. <article-title>Microbial Dysbiosis associated with impaired intestinal Na+/H+ exchange accelerates and exacerbates colitis in ex-germ free mice</article-title>. <source>Mucosal Immunol</source>. (<year>2018</year>) <volume>11</volume>:<fpage>1329</fpage>&#x2013;<lpage>41</lpage>. doi: <pub-id pub-id-type="doi">10.1038/s41385-018-0035-2</pub-id>, PMID: <pub-id pub-id-type="pmid">29875400</pub-id></citation></ref>
<ref id="ref64"><label>64.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>J</given-names></name> <name><surname>Shi</surname> <given-names>H</given-names></name> <name><surname>Wang</surname> <given-names>Y</given-names></name> <name><surname>Cao</surname> <given-names>Z</given-names></name> <name><surname>Yang</surname> <given-names>H</given-names></name> <name><surname>Li</surname> <given-names>S</given-names></name></person-group>. <article-title>Effect of limit-fed diets with different forage to concentrate rations on fecal bacterial and archaeal community composition in Holstein heifers</article-title>. <source>Front Microbiol</source>. (<year>2018</year>) <volume>9</volume>:<fpage>9</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2018.00976</pub-id>, PMID: <pub-id pub-id-type="pmid">29867879</pub-id></citation></ref>
<ref id="ref65"><label>65.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fonseca</surname> <given-names>PAS</given-names></name> <name><surname>Lam</surname> <given-names>S</given-names></name> <name><surname>Chen</surname> <given-names>Y</given-names></name> <name><surname>Waters</surname> <given-names>SM</given-names></name> <name><surname>Guan</surname> <given-names>LL</given-names></name> <name><surname>Canovas</surname> <given-names>A</given-names></name></person-group>. <article-title>Multi-breed host rumen epithelium transcriptome and microbiome associations and their relationship with beef cattle feed efficiency</article-title>. <source>Sci Rep</source>. (<year>2023</year>) <volume>13</volume>:<fpage>16209</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41598-023-43097-8</pub-id>, PMID: <pub-id pub-id-type="pmid">37758745</pub-id></citation></ref>
<ref id="ref66"><label>66.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Han</surname> <given-names>X</given-names></name> <name><surname>Lei</surname> <given-names>X</given-names></name> <name><surname>Yang</surname> <given-names>X</given-names></name> <name><surname>Shen</surname> <given-names>J</given-names></name> <name><surname>Zheng</surname> <given-names>L</given-names></name> <name><surname>Jin</surname> <given-names>C</given-names></name> <etal/></person-group>. <article-title>A metagenomic insight into the hindgut microbiota and their metabolites for dairy goats fed different rumen degradable starch</article-title>. <source>Front Microbiol</source>. (<year>2021</year>) <volume>12</volume>:<fpage>12</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2021.651631</pub-id>, PMID: <pub-id pub-id-type="pmid">34163442</pub-id></citation></ref>
<ref id="ref67"><label>67.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Li</surname> <given-names>B</given-names></name> <name><surname>Yin</surname> <given-names>W</given-names></name> <name><surname>Lei</surname> <given-names>M</given-names></name> <name><surname>Wang</surname> <given-names>X</given-names></name> <name><surname>Yang</surname> <given-names>Y</given-names></name> <name><surname>Zhang</surname> <given-names>C</given-names></name> <etal/></person-group>. <article-title>Exploring the Digesta- and mucosa-associated microbial community dynamics in the rumen and hindgut of goats from birth to adult</article-title>. <source>Front Microbiol</source>. (<year>2023</year>) <volume>14</volume>:<fpage>1190348</fpage>. doi: <pub-id pub-id-type="doi">10.3389/fmicb.2023.1190348</pub-id>, PMID: <pub-id pub-id-type="pmid">37396393</pub-id></citation></ref>
</ref-list>
</back>
</article>