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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2025.1635709</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Silicon application enhances drought resilience in buckwheat: a comparative study of three varieties</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Krucky</surname>
<given-names>Jiri</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1570229/overview"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Hejnak</surname>
<given-names>Vaclav</given-names>
</name>
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<contrib contrib-type="author">
<name>
<surname>Vachova</surname>
<given-names>Pavla</given-names>
</name>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Gupta</surname>
<given-names>Aayushi</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1251186/overview"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Kubes</surname>
<given-names>Jan</given-names>
</name>
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<contrib contrib-type="author">
<name>
<surname>Popov</surname>
<given-names>Marek</given-names>
</name>
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</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Skalicky</surname>
<given-names>Milan</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
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<aff id="aff1">
<institution>Department of Botany and Plant Physiology, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague</institution>, <addr-line>Prague</addr-line>,&#xa0;<country>Czechia</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/243613/overview">Mohd. Kamran Khan</ext-link>, Sel&#xe7;uk University, T&#xfc;rkiye</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2846048/overview">Thounaojam Thorny Chanu</ext-link>, Assam Don Bosco University, India</p>
<p>Kolima Pe&#xf1;a Calzada, University of Sancti Spiritus, Cuba</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Milan Skalicky, <email xlink:href="mailto:skalicky@af.czu.cz">skalicky@af.czu.cz</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>23</day>
<month>09</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>16</volume>
<elocation-id>1635709</elocation-id>
<history>
<date date-type="received">
<day>26</day>
<month>05</month>
<year>2025</year>
</date>
<date date-type="accepted">
<day>25</day>
<month>08</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Krucky, Hejnak, Vachova, Gupta, Kubes, Popov and Skalicky.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Krucky, Hejnak, Vachova, Gupta, Kubes, Popov and Skalicky</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>This study evaluated the effects of foliar silicon (Si) application on physiological and biochemical traits in three buckwheat lines (La Harpe, Panda, Smuga) grown under optimal (control) and drought stress conditions. Plants were cultivated under controlled conditions with four treatments: Control (80% water availability), Drought (40%), Control + Si, and Drought + Si (0.5 mM Na<sub>2</sub>SiO<sub>3</sub>&#xb7;9H<sub>2</sub>O applied to foliage). Water stress significantly reduced relative leaf water content (RWC), osmotic potential (&#x3a8;<sub>s</sub>), photosynthetic pigments, and gas exchange parameters (<italic>A</italic>, <italic>E</italic>, <italic>g<sub>s</sub>
</italic>) in all varieties. It also increased malondialdehyde (MDA), total flavonoid content (TFC), total antioxidant capacity (TAC), and 5-methylcytosine (5mC), while Fv/Fm remained unchanged, indicating sustained photosystem II activity. However, varietal differences were evident. La Harpe and Panda showed lower RWC, &#x3a8;<sub>s</sub>, <italic>A</italic>, <italic>E</italic>, and <italic>g<sub>s</sub>
</italic> under drought than Smuga. La Harpe had the highest MDA accumulation in roots, increased 5mC levels in leaves, and was the only line with decreased water use efficiency (WUE). Smuga exhibited the highest natural proline level and the strongest proline increase under drought. Foliar Si application reduced MDA and enhanced antioxidant activity (TFC, TAC) in both roots and leaves across all varieties, under both water regimes. The strongest antioxidant response was observed in La Harpe. Si also improved photosynthetic pigment levels, likely contributing to the protection of the photosynthetic apparatus under drought stress. Its effects on RWC, &#x3a8;<sub>s</sub>, and gas exchange under drought were variety-specific: La Harpe and Panda responded positively, while Smuga showed minimal changes. Group correlation analysis under drought showed that Smuga had the strongest positive correlations between plant health traits and stress responses, suggesting effective physiological coordination. Panda showed moderate, and La Harpe negative, correlations. After Si application, these relationships improved most in Smuga, moderately in Panda, and least in La Harpe. Overall, the results reveal clear genotype-specific responses to foliar-applied Si in buckwheat. Silicon improved antioxidant defenses, mitigated drought-induced oxidative stress, and supported physiological functions, particularly in Smuga. These findings support using Si as a promising tool to enhance drought resilience in buckwheat cultivation.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Fagopyrum esculentum</italic>
</kwd>
<kwd>RWC</kwd>
<kwd>proline</kwd>
<kwd>malondialdehyde</kwd>
<kwd>5-methylcytosine</kwd>
<kwd>osmotic potential</kwd>
<kwd>leaf gas exchange</kwd>
</kwd-group>
<contract-num rid="cn001">23&#x2010;04221 L</contract-num>
<contract-sponsor id="cn001">Grantov&#xe1; Agentura &#x10c;esk&#xe9; Republiky<named-content content-type="fundref-id">10.13039/501100001824</named-content>
</contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="3"/>
<equation-count count="5"/>
<ref-count count="77"/>
<page-count count="15"/>
<word-count count="7711"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Plant Abiotic Stress</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>Drought is one of the most serious abiotic stressors that negatively affects agricultural crop growth, development and production (<xref ref-type="bibr" rid="B5">Alam et&#xa0;al., 2024</xref>; <xref ref-type="bibr" rid="B30">Hossain et&#xa0;al., 2024</xref>). In addition to reducing photosynthetic activity, nutrient uptake and distribution, a plant&#x2019;s water deficit can increase the accumulation of reactive oxygen species (ROS) and the development of oxidative stress (<xref ref-type="bibr" rid="B4">Akhtar and Ilyas, 2022</xref>; <xref ref-type="bibr" rid="B3">Ahsan et&#xa0;al., 2023</xref>). In recent years, there has been increasing interest in the use of silicon (Si) as a potential plant biostimulant to mitigate the negative effects of abiotic stress factors, especially drought (<xref ref-type="bibr" rid="B57">Sharf-Eldin et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B73">Zahedi et&#xa0;al., 2023</xref>). Foliar application of silicon compounds has been shown to be an effective way of supplying the element to crops (<xref ref-type="bibr" rid="B3">Ahsan et&#xa0;al., 2023</xref>).</p>
<p>Applying Si to plants subject to water deficits can activate specific defense mechanisms. Silicon has been shown to enhance chlorophyll content (<xref ref-type="bibr" rid="B75">Zhang et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B3">Ahsan et&#xa0;al., 2023</xref>) and reduce stomatal conductance and transpiration, thereby contributing to the maintenance of efficient photosynthesis (<xref ref-type="bibr" rid="B6">Al-Selwey et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B44">Nazim et&#xa0;al., 2024</xref>; <xref ref-type="bibr" rid="B55">Sattar et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B57">Sharf-Eldin et&#xa0;al., 2023</xref>). Si can also stabilize a plant&#x2019;s water balance by improving the osmotic potential (&#x3a8;<sub>s</sub>) in leaves (<xref ref-type="bibr" rid="B54">Saja-Garbarz et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B53">2024</xref>) and maintaining a higher relative water content (RWC) (<xref ref-type="bibr" rid="B22">Desoky et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B45">Ning et&#xa0;al., 2023</xref>).</p>
<p>In response to drought, plants often accumulate the amino acid proline, which plays a key role in osmoregulation, protection of cellular structures, and free radical elimination (<xref ref-type="bibr" rid="B4">Akhtar and Ilyas, 2022</xref>; <xref ref-type="bibr" rid="B41">Morshedloo et&#xa0;al., 2025</xref>). In addition, Si can reduce the level of malondialdehyde (MDA), a marker of lipid peroxidation and oxidative stress (<xref ref-type="bibr" rid="B39">Mahmoud et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B72">Zadegan et&#xa0;al., 2023</xref>) by stimulating flavonoid synthesis (TFC) and antioxidant defense systems, which increases total antioxidant capacity (TAC) (<xref ref-type="bibr" rid="B22">Desoky et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B29">Handaragamage and Abeysinghe, 2024</xref>; <xref ref-type="bibr" rid="B41">Morshedloo et&#xa0;al., 2025</xref>). Silicon&#x2019;s mechanism of action may also involve epigenetic regulation, e.g., by altering the levels of 5-methylcytosine (5mC), which plays a role in the plant&#x2019;s response to stress (<xref ref-type="bibr" rid="B51">Rao et&#xa0;al., 2024</xref>; <xref ref-type="bibr" rid="B77">Zi et&#xa0;al., 2024</xref>).</p>
<p>Common buckwheat (<italic>Fagopyrum esculentum</italic> Moench.) is one of the pseudocereals with increased sensitivity to drought (<xref ref-type="bibr" rid="B10">Aubert et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B25">Germ et&#xa0;al., 2025</xref>). Although studies investigating the effect of drought on different aspects of buckwheat physiology are available (<xref ref-type="bibr" rid="B47">Oksana et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B50">Rangappa et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B30">Hossain et&#xa0;al., 2024</xref>), a detailed understanding of the effects of foliar application of silicon on physiological and biochemical parameters in different buckwheat lines under drought conditions is still lacking.</p>
<p>This study aims to elucidate the mechanisms by which foliar application of silicon affects physiological (RWC, &#x3a8;<sub>s</sub>, Fv/Fm, <italic>A</italic>, <italic>E</italic>, <italic>g<sub>s</sub>
</italic>, WUE, WUE<sub>i</sub>), biochemical (proline content, MDA, TFC, TAC, chlorophyll <italic>a</italic>, chlorophyll <italic>b</italic>, total chlorophyll and carotenoids) and potentially epigenetic (5mC) parameters in selected buckwheat cultivars under stress from water deficiency. We anticipate that the results will indicate which buckwheat variety has the highest drought resistance and extend our knowledge about the physiological mechanism of the effect. Our goal is to mitigate the negative effects of dry periods due to climate change by optimizing agronomic strategies for silicon application.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<label>2</label>
<title>Materials and methods</title>
<sec id="s2_1">
<label>2.1</label>
<title>Plant material and experimental conditions</title>
<p>The common buckwheat (<italic>Fagopyrum esculentum</italic> Moench.) cultivars, La Harpe (French origin), Panda (Polish origin), and Smuga (Polish origin) were selected as experimental subjects. These cultivars were chosen based on contrasting responses to drought stress observed in preliminary testing, conducted in cooperation with Pozna&#x144; University of Life Sciences under a bilateral Czech&#x2013;Polish research project. These three cultivars were selected based on their contrasting physiological responses to water limitation and agronomic traits, making them suitable for comparative analysis of silicon (Si)-mediated drought mitigation.</p>
<p>La Harpe is a French cultivar included in the official variety list of France and used in the production of buckwheat flour under the protected geographical indication &#x201c;Farine de bl&#xe9; noir de Bretagne.&#x201d; It is considered a moderately late-flowering variety, typically grown in Western Europe, with good adaptability to temperate conditions and a relatively stable seed set. It also contains favorable levels of flavonoids and low husk content (Girerd, France).</p>
<p>Panda is a well-established Polish cultivar characterized by mid-early maturity and good adaptation to continental and moderately cold conditions. It is cultivated primarily for food-grade uses and is suitable for low-input farming systems (PH &#x201c;SIM&#x201d; S&#x142;awomir Herman, Poland).</p>
<p>Smuga is another improved Polish cultivar known for high yield potential (up to 2.7 t/ha), enhanced lodging resistance, and greater drought tolerance. It exhibits a higher 1000-seed weight and protein content compared to other available Polish varieties (Logistic Sp. z o.o., Poland).</p>
<p>Seeds of selected varieties were sterilized by soaking in 1% NaClO for 5 min and then rinsed several times with distilled water. The seeds were then allowed to dry on a paper towel to achieve natural moisture. The sterilized seeds were sown in plastic pots (11 &#xd7; 11 &#xd7; 23 cm) filled with peat substrate (Klasmann TS2, Germany). The pot experiment was carried out in a plant growth chamber (Conviron E8, Winnipeg, Canada) with a CMP6050 control system at an artificial light intensity of 750 &#xb5;mol m<sup>&#x2212;2</sup> s<sup>&#x2212;1</sup>, a photoperiod of 14/10 h (day/night), a temperature of 23&#xb0;C/18&#xb0;C (day/night) and relative humidity of 50%/60% (day/night).</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Experimental setup and treatments</title>
<p>The cultivation phase lasted 18 days, during which all the plants were regularly irrigated until the 3rd to 5th true leaves appeared. This was followed by the experimental phase, where the pots (five for each variety with four plants per pot) were randomly divided into four treatments: Control (irrigated, without Si), Drought (dry, without Si), Control + Si (irrigated, with 0.5 mM Si), Drought + Si (dry, with 0.5 mM Si). The silicon formulation (Na<sub>2</sub>SiO<sub>3</sub>&#xb7;9H<sub>2</sub>O; Merck KGaA, Darmstadt, Germany; Si) was dissolved in distilled water at the above concentration and sprayed evenly on the leaves to ensure complete leaf coverage, once at the beginning of the experimental phase using a hand-held pressurized sprayer (SOLO 402, Kleinmotoren GmbH, Germany). Before contact with the silicon formulation, the substrate was carefully covered with aluminum foil, which was removed from the pots after the solution had dried on the leaves.</p>
<p>Regular gravimetric measurements monitored the operation of the watering system. Every two days, the pot water was checked and maintained at 80% of the substrate water capacity to reach the optimum hydration level in the irrigated groups (Control, Control + Si). Drought stress was induced by limiting watering, which gradually reduced the moisture level to 40% of the substrate water capacity in the stressed variants (Drought, Drought + Si), and this level was maintained throughout the experimental phase (12 days). At the end of the drought period, plant material was sampled, and the studied parameters were measured. All data values are based on five replicates.</p>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>Relative water content of leaves</title>
<p>The gravimetric method determined relative water content (RWC) on fully expanded leaves. In this method, five identical targets were taken from the center of the leaf and weighed for their fresh weight (FW), the turgor weight (TW) of these segments after saturation with water for 4 h, and the dry weight (DW) of these segments after drying in an oven at 90 &#xb0;C for 3 h. The RWC was then calculated by the formula below:</p>
<disp-formula>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:mi>R</mml:mi>
<mml:mi>W</mml:mi>
<mml:mi>C</mml:mi>
<mml:mo>&#xa0;</mml:mo>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mo>%</mml:mo>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mo>&#xa0;</mml:mo>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mrow>
<mml:mi>F</mml:mi>
<mml:mi>W</mml:mi>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>D</mml:mi>
<mml:mi>W</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
</mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mrow>
<mml:mi>T</mml:mi>
<mml:mi>W</mml:mi>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>D</mml:mi>
<mml:mi>W</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
</mml:mrow>
</mml:mfrac>
<mml:mo>&#xa0;</mml:mo>
<mml:mo>&#xd7;</mml:mo>
<mml:mo>&#xa0;</mml:mo>
<mml:mn>100</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
</sec>
<sec id="s2_4">
<label>2.4</label>
<title>Leaf osmotic potential</title>
<p>Leaf osmotic potential (&#x3a8;<sub>s</sub>) was determined using a Psypro instrument (Wescor Inc., Logan, Utah, USA). First, buckwheat leaf samples were collected and placed in 5 ml syringes, sealed with Parafilm and frozen at -24&#xb0;C. Before measurement, the samples were kept at laboratory temperature until the plant tissues were completely thawed. Subsequently, the contents of the syringe was squeezed into an Eppendorf microfuge tube (1.5 ml), the extract was mixed and 20 &#xb5;L was pipetted onto a 6 mm diameter sampling disc (ELITech Group Biomedical Systems, Logan, Utah, USA), which was placed into a C-52 sampling chamber (Wescor Inc., Logan, Utah) and the osmotic potential of the leaves was determined in MPa after 45 min of sample stabilization.</p>
</sec>
<sec id="s2_5">
<label>2.5</label>
<title>Leaf proline content</title>
<p>The method of <xref ref-type="bibr" rid="B14">Bates et&#xa0;al. (1973)</xref> with modifications was employed to determine the proline content. A leaf sample (0.5 g) was ground in 10 ml of 3% sulphosalicylic acid using a mortar and pestle, and the suspension was filtered through filter paper. Subsequently, 1 ml of the filtrate was mixed with 1 ml of acidic ninhydrin solution and 1 ml of glacial acetic acid and placed on a shaker (GFL 3005, Verkon Ltd., Prague, Czech Republic) for 15 min. The samples were then heated in a water bath (Memmert WTB, Verkon Ltd., Prague, Czech Republic) at 90&#xb0;C for 30 minutes, and after cooling, 3 ml of toluene was added to each sample and the tubes were placed on a shaker for 30 minutes. The samples were held for 24 h at 6&#xb0;C, after which the absorbance at 520 nm of the upper layer of the separated mixture was measured with a spectrophotometer (UV-Vis, Evolution 201, Thermo Scientific, USA). The concentration of proline in &#xb5;mol g<sup>-1</sup> fresh weight was determined using a calibration curve.</p>
</sec>
<sec id="s2_6">
<label>2.6</label>
<title>Malondialdehyde (MDA) content</title>
<p>MDA content in plant tissues was determined using an assay developed by <xref ref-type="bibr" rid="B23">Du and Bramlage (1992)</xref>. Leaves or roots samples of buckwheat (0.5 g) were ground to a fine powder in liquid nitrogen and suspended in 80% ethanol. The suspension was filtered through Whatman filter paper with 0.45 &#x3bc;m pore size, and the 0.7 ml of reaction solution (consisting of trichloroacetic acid, 2-thiobarbituric acid and 1% butylated hydroxytoluene) was added to the same volume of the filtrate. The reaction mixture was heated in a water bath at 95&#xb0;C for 20 minutes, and after cooling, the samples were centrifuged at 12,000 rcf (relative centrifugation force) at 4&#xb0;C for 1 min. The absorbance of the supernatants was measured at 440, 532 and 600 nm using water as a blank in a spectrophotometer (UV-Vis, Evolution 201, Thermo Scientific, USA). The MDA concentration was calculated according to <xref ref-type="bibr" rid="B23">Du and Bramlage (1992)</xref> and expressed as nmol g<sup>-1</sup> leaf fresh weight (FW).</p>
</sec>
<sec id="s2_7">
<label>2.7</label>
<title>Total flavonoid content (TFC)</title>
<p>The TFC was measured using the method described by <xref ref-type="bibr" rid="B62">Tsanova-Savova et&#xa0;al. (2018)</xref>. An aliquot of the ethanolic extract from the MDA assay was mixed with 5% NaNO<sub>2</sub>, 10% AlCl<sub>3</sub>, and 1 M NaOH. The solution was immediately measured against a blank at 415 nm at lab temperature, and TFC was calculated as quercetin equivalents (QEs) in mg g<sup>-1</sup> FW.</p>
</sec>
<sec id="s2_8">
<label>2.8</label>
<title>Total antioxidant capacity (TAC)</title>
<p>The method for measuring TAC was adapted from <xref ref-type="bibr" rid="B49">Prieto et&#xa0;al. (1999)</xref>. Aliquots of the same ethanolic extracts from previous assays were mixed with a 1 ml reagent solution containing 0.6 M H<sub>2</sub>SO<sub>4</sub>, 28 mM Na<sub>3</sub>PO<sub>4</sub> and 4 mM (NH<sub>4</sub>)<sub>6</sub>Mo<sub>7</sub>O<sub>24</sub>. The mixture was heated at 95&#xb0;C for 90 min, and the absorbance was read at 695 nm against a blank. The TAC was calculated as ascorbic acid equivalents (AAEs) in mg g<sup>-1</sup> FW.</p>
</sec>
<sec id="s2_9">
<label>2.9</label>
<title>DNA isolation and 5-methylcytosine determination</title>
<p>Samples of buckwheat leaves were ground in liquid nitrogen with a mortar and pestle. DNA was isolated from samples of plant material (100 mg fresh weight) with a NucleoSpin Plant II isolation kit (Macherey-Nagel GmbH &amp; Co. KG, Dueren, Germany) using the recommended miniprep protocol with PL1 lysis buffer. Global DNA methylation levels (100 ng of DNA) were determined using a fluorometric MethylFlash methylated DNA quantification kit (Epigentek Group Inc., Farmingdale, NY, USA) following the manufacturer&#x2019;s protocol. Fluorescence (530EX/590EM) was measured on a fluorescence microplate reader (Tecan Infinity M200, Tecan Deutschland GmbH, Crailsheim, Germany) and quantified with Magellan software.</p>
</sec>
<sec id="s2_10">
<label>2.10</label>
<title>Pigment content</title>
<p>To calculate the concentration of chlorophylls and carotenoids, identical targets were cut from buckwheat leaves using a cork borer and extracted in 1 ml of N, N-dimethylformamide for four hours in the dark. Subsequently, the solutions were placed on a shaker (GFL 3005) for 45 min. Then the absorbance was measured using a spectrophotometer (UV-Vis, Evolution 201, Thermo Scientific, USA) at wavelengths of 663.8 nm, 646.8 nm and 480 nm. The following formulas were used to calculate chlorophyll <italic>a</italic> (Chl <italic>a</italic>), chlorophyll <italic>b</italic> (Chl <italic>b</italic>), total chlorophyll and carotenoids.</p>
<disp-formula>
<mml:math display="block" id="M2">
<mml:mrow>
<mml:mtext>Chl</mml:mtext>
<mml:mi>a</mml:mi>
<mml:mo>=</mml:mo>
<mml:mn>12.0</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>663.8</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:mn>3.11</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>646.8</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
<disp-formula>
<mml:math display="block" id="M3">
<mml:mrow>
<mml:mtext>Chl</mml:mtext>
<mml:mi>b</mml:mi>
<mml:mo>=</mml:mo>
<mml:mn>20.78</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>646.8</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:mn>4.88</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>663.8</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
<disp-formula>
<mml:math display="block" id="M4">
<mml:mrow>
<mml:mtext>Total&#xa0;chlorophyll</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mn>7.12</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>663.8</mml:mn>
<mml:mo>+</mml:mo>
<mml:mn>17.67</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>646.8</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
<p>(<xref ref-type="bibr" rid="B48">Porra et&#xa0;al., 1989</xref>)</p>
<disp-formula>
<mml:math display="block" id="M5">
<mml:mrow>
<mml:mtext>Carotenoids</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mn>1000</mml:mn>
<mml:mtext>A</mml:mtext>
<mml:mn>480</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:mn>1.12</mml:mn>
<mml:mtext>Chl</mml:mtext>
<mml:mi>a</mml:mi>
<mml:mo>&#x2212;</mml:mo>
<mml:mn>34.07</mml:mn>
<mml:mtext>Chl</mml:mtext>
<mml:mi>b</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
<mml:mo stretchy="false">/</mml:mo>
<mml:mn>245</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
<p>(<xref ref-type="bibr" rid="B68">Wellburn, 1994</xref>)</p>
</sec>
<sec id="s2_11">
<label>2.11</label>
<title>Maximum quantum efficiency of PSII (Fv/Fm)</title>
<p>The FluorPen FP110 portable fluorometer (PSI, Dr&#xe1;sov, Czech Republic) was used to evaluate the maximum quantum efficiency of PSII (Fv/Fm). Fully expanded buckwheat leaves were dark-adapted for 20 min using removable leaf clips, and subsequent measurements were performed in the morning between 9 and 11 am.</p>
</sec>
<sec id="s2_12">
<label>2.12</label>
<title>Leaf gas exchange parameters</title>
<p>The net photosynthetic rate, <italic>A</italic> (&#x3bc;mol CO<sub>2</sub> m<sup>-2</sup> s<sup>-1</sup>), the transpiration rate, <italic>E</italic> (mmol H<sub>2</sub>O m<sup>-2</sup> s<sup>-1</sup>), and the stomatal conductance, <italic>g<sub>s</sub>
</italic> (mol H<sub>2</sub>O m<sup>-2</sup> s<sup>-1</sup>), were measured in fully expanded leaves using the LCpro+ portable gas exchange system (ADC BioScientific Ltd., Hoddesdon, UK). Gas exchange parameters were measured in the morning (between 9 and 11 am) under steady-state conditions in a measurement chamber at 23&#xb0;C with photosynthetically active radiation (PAR) irradiance at 750 &#xb5;mol m<sup>&#x2212;2</sup> s<sup>&#x2212;1</sup>. The instantaneous water use efficiency (WUE) was calculated as the ratio <italic>A</italic>/<italic>E</italic>, and the intrinsic water use efficiency (WUE<sub>i</sub>) as the ratio <italic>A</italic>/<italic>g<sub>s</sub>
</italic>.</p>
</sec>
<sec id="s2_13">
<label>2.13</label>
<title>Statistical analysis</title>
<p>All statistical analyses were performed in R (version 4.3.0; <xref ref-type="bibr" rid="B52">R Core Team, 2023</xref>) and Microsoft Excel. The analytical workflow included data transformation, descriptive statistics, non-parametric testing, and trait correlation analysis.</p>
<p>To assess treatment effects, we applied the Kruskal-Wallis rank-sum test (<xref ref-type="bibr" rid="B34">Kruskal and Wallis, 1952</xref>), a non-parametric alternative to ANOVA suitable for comparing more than two independent groups. Where significant differences were detected, Dunn&#x2019;s test with multiple testing correction was used for <italic>post-hoc</italic> comparisons.</p>
<p>For each combination of variety and treatment, we calculated medians and interquartile ranges (IQRs) for all physiological and biochemical parameters. These robust summary statistics are appropriate for skewed or non-normally distributed data (<xref ref-type="bibr" rid="B69">Wilcox, 2012</xref>). Median values were visualized using bar plots, with IQRs shown as error bars and raw data points overlaid to illustrate within-group variability (<xref ref-type="bibr" rid="B67">Weissgerber et&#xa0;al., 2015</xref>). Summary tables of descriptive statistics were compiled for all variables across treatment groups.</p>
<p>We conducted a grouped correlation analysis to evaluate systemic coordination between physiological performance and defense mechanisms. Traits were categorized into health-related and defense-related groups based on their biological roles (as defined in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). We calculated the mean Pearson correlation coefficient for each variety and treatment across all pairwise combinations between traits from the two groups. This yielded a single summary value &#x2014; the health&#x2013; defense correlation &#x2014; representing the degree of physiological-functional integration under each condition.</p>
<p>To quantify the effect of silicon application under drought, we calculated the difference in health&#x2013; defense correlation between the Drought + Si and Drought treatments for each variety (denoted as &#x394; health&#x2013;defense). This metric served as an indicator of how silicon influenced the coordination between stress response and physiological functioning.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results and discussion</title>
<sec id="s3_1">
<label>3.1</label>
<title>Effect of drought and Si treatment on relative water content</title>
<p>RWC is a key indicator of a plant&#x2019;s hydration and its ability to retain water. Under drought conditions, RWC decreases, which reduces cellular function and can lead to metabolic disturbances and growth retardation. In our experiments, all three buckwheat cultivars showed significant reductions in RWC under drought conditions compared to the Control (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). This trend mirrored the results of other studies (<xref ref-type="bibr" rid="B22">Desoky et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B20">Condorelli et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B45">Ning et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B57">Sharf-Eldin et&#xa0;al., 2023</xref>). It should be noted that the La Harpe and Panda buckwheat varieties showed significantly lower RWC values under drought stress than the Smuga variety, indicating their lower tolerance to water deficits.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Effect of foliar application of silicon on relative water content and leaf osmotic potential of different buckwheat varieties under drought conditions.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Variety</th>
<th valign="middle" align="center">Treatment</th>
<th valign="middle" align="center">
<italic>Relative water content (%)</italic>
</th>
<th valign="middle" align="center">
<italic>Leaf osmotic potential (MPa)</italic>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="4" align="center">La Harpe</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="center">85.52 &#xb1; 3.97<sup>c</sup>
</td>
<td valign="middle" align="center">-0.85 &#xb1; 0.12<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="center">66.51 &#xb1; 0.80<sup>a</sup>
</td>
<td valign="middle" align="center">-1.82 &#xb1; 0.08<sup>c</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="center">86.82 &#xb1; 3.53<sup>c</sup>
</td>
<td valign="middle" align="center">-0.76 &#xb1; 0.05<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="center">72.03 &#xb1; 1.59<sup>b</sup>
</td>
<td valign="middle" align="center">-1.41 &#xb1; 0.10<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" rowspan="4" align="center">Panda</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="center">86.11 &#xb1; 3.17<sup>c</sup>
</td>
<td valign="middle" align="center">-0.83 &#xb1; 0.09<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="center">66.41 &#xb1; 1.19<sup>a</sup>
</td>
<td valign="middle" align="center">-1.89 &#xb1; 0.07<sup>c</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="center">85.54 &#xb1; 3.07<sup>c</sup>
</td>
<td valign="middle" align="center">-0.83 &#xb1; 0.06<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="center">70.11 &#xb1; 0.49<sup>b</sup>
</td>
<td valign="middle" align="center">-1.57 &#xb1; 0.05<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" rowspan="4" align="center">Smuga</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="center">86.58 &#xb1; 3.41<sup>c</sup>
</td>
<td valign="middle" align="center">-0.76 &#xb1; 0.06<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="center">69.36 &#xb1; 0.72<sup>b</sup>
</td>
<td valign="middle" align="center">-1.63 &#xb1; 0.10<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="center">84.78 &#xb1; 1.35<sup>c</sup>
</td>
<td valign="middle" align="center">-0.85 &#xb1; 0.09<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="center">69.88 &#xb1; 0.26<sup>b</sup>
</td>
<td valign="middle" align="center">-1.53 &#xb1; 0.09<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" colspan="2" align="center">Kruskal-Wallis ANOVA</td>
<td valign="middle" align="center">51.05</td>
<td valign="middle" align="center">51,91</td>
</tr>
<tr>
<td valign="middle" colspan="2" align="center">
<italic>p</italic>
</td>
<td valign="middle" align="center">&lt;0.001</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Different letters indicate statistically significant differences among treatments (&#x3b1; = 0.05).</p>
</table-wrap-foot>
</table-wrap>
<p>We also investigated whether foliar silicon (Si) applications could increase RWC in drought-stressed plants. In the La Harpe and Panda groups, Si application significantly increased RWC compared to untreated plants, but the values were still lower than those of the Control. This increase could be explained by Si&#x2019;s ability to form a water-retaining silica hydrogel (SiO<sub>2</sub>&#xb7;nH<sub>2</sub>O) in the leaves, which could raise the RWC by binding free water. Similar results have been reported in wheat and rapeseed (<xref ref-type="bibr" rid="B45">Ning et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B55">Sattar et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B53">Saja-Garbarz et&#xa0;al., 2024</xref>). However, the application of Si did not significantly improve RWC in the Smuga buckwheat variety, which maintained higher RWC values than the other varieties even under drought. This suggests that Smuga naturally possesses different physiological water management mechanisms that confer greater drought resistance. Similar genotypic differences have been described in wheat (<xref ref-type="bibr" rid="B59">Thorne et&#xa0;al., 2021</xref>). The application of Si to control unstressed plants did not significantly affect RWC.</p>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Leaf osmotic potential, &#x3a8;<sub>s</sub>
</title>
<p>Leaf osmotic potential (&#x3a8;<sub>s</sub>) is an important parameter of plants&#x2019; osmotic regulation and water management. Our data showed a strong positive correlation between RWC and &#x3a8;<sub>s</sub> in all three varieties (La Harpe, r = 0.966; Panda, r = 0.973; Smuga, r = 0.968). In agreement with the literature (<xref ref-type="bibr" rid="B13">Bashir et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B20">Condorelli et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B26">Guizani et&#xa0;al., 2023</xref>), &#x3a8;<sub>s</sub> values were significantly lower in the three buckwheat cultivars under water deficit compared with regular irrigation in the Control.</p>
<p>Applying Si to drought-stressed plants increased the &#x3a8;<sub>s</sub> for all plants, but only significantly for La Harpe and Panda (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). These results confirm that Si can improve osmotic balance and reduce water loss by transpiration in the more sensitive buckwheat varieties. However, in Smuga, the response to Si application remained statistically inconclusive. This buckwheat maintained a higher &#x3a8;<sub>s</sub> without Si treatment, possibly because its genetic makeup predisposed it to osmotic adaptation (<xref ref-type="bibr" rid="B8">Aranda et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B20">Condorelli et&#xa0;al., 2022</xref>).</p>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Proline content</title>
<p>The proline concentration (&#xb5;mol g<sup>-1</sup> FW) is an important indicator of plant response to abiotic stresses. Proline helps to maintain cell turgor, stabilizes proteins and membranes, and acts as an antioxidant (<xref ref-type="bibr" rid="B16">Blum et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B19">Chen and Murata, 2002</xref>). Our study found significant differences in proline levels between buckwheat varieties under normal irrigation (Controls), with the highest content recorded in Smuga plants. Water deficit stress (both Drought and Drought + Si groups) led to a significant increase in proline accumulation in all varieties (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1A</bold>
</xref>), with Smuga showing the greatest proline increase because of its higher level of drought tolerance. These results agree with findings from studies of other crops (<xref ref-type="bibr" rid="B37">Maghsoudi et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B40">Mehta et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B6">Al-Selwey et&#xa0;al., 2023</xref>). A significant increase in proline content was also observed in the Control + Si groups, especially in La Harpe and Panda (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1A</bold>
</xref>). This may be related to their naturally lower proline levels and greater responsiveness to Si application (<xref ref-type="bibr" rid="B24">Esmaili et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B22">Desoky et&#xa0;al., 2021</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Effect of foliar application of silicon on proline content <bold>(A)</bold> and 5-methylcytosine levels <bold>(B)</bold> of different buckwheat varieties under drought conditions. Data are presented as medians &#xb1; IQR. Kruskal-Wallis ANOVA: H = 51.71; <italic>P</italic>&lt; 0.001. Different letters indicate statistically significant differences among treatments.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635709-g001.tif">
<alt-text content-type="machine-generated">Bar charts titled &#x201c;A&#x201d; and &#x201c;B&#x201d; display proline and 5-methylcytosine (5mC) levels in La Harpe, Panda, and Smuga under four conditions: Control, Control + Si, Drought, and Drought + Si. In chart A, proline levels are highest in Smuga under Drought + Si. Chart B shows peak 5mC percentages in La Harpe under Drought + Si. Different letters indicate significant differences across treatments.</alt-text>
</graphic>
</fig>
</sec>
<sec id="s3_4">
<label>3.4</label>
<title>Malondialdehyde content</title>
<p>MDA concentration in plant tissues reflects the level of oxidative stress and the extent of membrane damage by lipid peroxidation resulting from increased production of reactive oxygen species (ROS). In our buckwheat varieties under drought conditions, the MDA content increased in all water-deficient plants compared with controls (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>), with the highest increase observed in the La Harpe roots. These results are consistent with findings in different buckwheat species (<xref ref-type="bibr" rid="B10">Aubert et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B70">Wu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B30">Hossain et&#xa0;al., 2024</xref>) and other species of the Polygonaceae family, such as <italic>Calligonum mongolicum</italic> (<xref ref-type="bibr" rid="B64">Ullah et&#xa0;al., 2022</xref>). Si application significantly reduced MDA content in leaves and roots in most cases, both in control and stressed plants. This effect confirms the ability of Si to stabilize membrane structures by inhibiting lipid peroxidation (<xref ref-type="bibr" rid="B63">Ullah et&#xa0;al., 2024</xref>; <xref ref-type="bibr" rid="B66">Weisany et&#xa0;al., 2024</xref>; <xref ref-type="bibr" rid="B41">Morshedloo et&#xa0;al., 2025</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Effect of foliar application of silicon on malondialdehyde content of leaves <bold>(A)</bold> and roots <bold>(B)</bold> of different buckwheat varieties under drought conditions. Data are presented as medians &#xb1; IQR. Kruskal-Wallis ANOVA: leaves H = 55.98; <italic>P</italic>&lt; 0.001; roots H = 55.4; <italic>P</italic>&lt; 0.001. Different letters indicate statistically significant differences among treatments.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635709-g002.tif">
<alt-text content-type="machine-generated">Bar charts A and B show the MDA levels in leaves and roots, respectively, for three cultivars: La Harpe, Panda, and Smuga. Treatments include Control, Control + Si, Drought, and Drought + Si, each marked by different colors. Different letters indicate statistically significant differences among treatments.</alt-text>
</graphic>
</fig>
</sec>
<sec id="s3_5">
<label>3.5</label>
<title>Total flavonoid content</title>
<p>Flavonoids are essential antioxidants that protect plants against oxidative stress caused by such conditions as drought, excessive UV radiation, insect attack, and infections with pathogens. The increase in flavonoid content in plants under drought stress has been described in several studies (<xref ref-type="bibr" rid="B13">Bashir et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B65">Wan et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B30">Hossain et&#xa0;al., 2024</xref>) and was confirmed in our experiments. Under drought conditions, TFC was higher than Control in all varieties and organs, with or without Si (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>). Leaves showed higher flavonoid content than roots, which could be explained by their greater UV exposure and the presence of ROS-generating reactions associated with photosynthesis. Roots synthesize flavonoids mainly for signaling to microorganisms in the rhizosphere. Foliar application of Si increased the flavonoid content even under control conditions, confirming its stimulatory effect on the production of secondary metabolites (<xref ref-type="bibr" rid="B22">Desoky et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B41">Morshedloo et&#xa0;al., 2025</xref>). The highest TFC values were recorded in La Harpe in the Drought + Si group, again pointing to the importance of Si in enhancing antioxidant defense systems in buckwheat varieties more sensitive to water stress.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Effect of foliar application of silicon on total flavonoid content (TFC) of leaves <bold>(A)</bold> and roots <bold>(B)</bold> of different buckwheat varieties under drought conditions. Data are presented as medians &#xb1; IQR. Kruskal-Wallis ANOVA: leaves H = 55.72; <italic>P</italic>&lt; 0.001; roots H = 57.01; <italic>P</italic>&lt; 0.001. Different letters indicate statistically significant differences among treatments.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635709-g003.tif">
<alt-text content-type="machine-generated">Bar charts titled A and B display total flavonoid content (TFC) in mg quercetin equivalents per g fresh weight for leaves and roots, respectively. The categories compared are Control, Control + Si, Drought, and Drought + Si across three cultivars: La Harpe, Panda, and Smuga. Chart A shows the highest TFC in Drought + Si in leaves, while chart B shows the highest TFC in Drought + Si in roots for La Harpe. Each cultivar displays varied TFC levels under different treatments, indicated by distinct color-coded bars. Error bars and significance letters are included for comparison.</alt-text>
</graphic>
</fig>
</sec>
<sec id="s3_6">
<label>3.6</label>
<title>Total antioxidant capacity</title>
<p>TAC expresses the ability of plants to neutralize reactive oxygen species (ROS) and protect cell structures from oxidative stress. Due to the increased need for protection against oxidative damage, TAC usually increases significantly under drought conditions (<xref ref-type="bibr" rid="B13">Bashir et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B30">Hossain et&#xa0;al., 2024</xref>). As shown in <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>, TAC increased under drought conditions relative to the control in all three buckwheat varieties, and TAC was higher in leaves than roots.</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Effect of foliar application of silicon on total antioxidant capacity (TAC) of leaves <bold>(A)</bold> and roots <bold>(B)</bold> of different buckwheat varieties under drought conditions. Data are presented as medians &#xb1; IQR. Kruskal-Wallis ANOVA: leaves H = 54.37; <italic>P</italic>&lt; 0.001; roots H = 54.64; <italic>P</italic>&lt; 0.001. Different letters indicate statistically significant differences among treatments.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635709-g004.tif">
<alt-text content-type="machine-generated">Bar charts comparing total antioxidant capacity (TAC) in leaves (A) and roots (B) of three varieties: La Harpe, Panda, and Smuga under four conditions: Control, Control + Si, Drought, and Drought + Si. The bars represent TAC in milligrams of ascorbic acid equivalents per gram of fresh weight. Each bar is marked with letters indicating statistical significance. In both charts, the Drought + Si condition generally shows the highest TAC values.</alt-text>
</graphic>
</fig>
<p>According to <xref ref-type="bibr" rid="B2">Afshari et&#xa0;al. (2021)</xref>; <xref ref-type="bibr" rid="B43">Mukarram et&#xa0;al. (2022)</xref> and <xref ref-type="bibr" rid="B9">Asyhar et&#xa0;al. (2023)</xref>, Si promotes the activity of plant antioxidant enzymes and induces the synthesis of flavonoids and phenolic compounds, thereby increasing TAC. In our results, Si application led to an increase in TAC in the leaves of all three buckwheat varieties both under drought conditions and with normal soil moisture levels. However, in Panda, the increase was slight and statistically nonsignificant (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). Panda did show higher basal TAC levels in leaves compared with the other varieties in both control and drought conditions. In contrast, La Harpe and Smuga showed a more pronounced response to Si application. In roots, the highest TAC content was found in La Harpe across all experimental groups, which is consistent with the TFC results.</p>
</sec>
<sec id="s3_7">
<label>3.7</label>
<title>Level of 5-methylcytosine</title>
<p>DNA methylation (5mC) is an important epigenetic mark that plays a key role in regulating gene expression. Stress signals such as drought have been shown to induce changes in DNA methylation, thereby promoting plant resistance and adaptation under adverse environmental conditions (<xref ref-type="bibr" rid="B18">Chang et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B58">Sun et&#xa0;al., 2022</xref>). At the molecular level, changes in 5mC levels can affect the plant&#x2019;s response to abiotic stressors by suppressing or activating specific genes. Such changes in gene expression can lead to the production of secondary metabolites, which play a crucial role in signal transduction and activation of defense mechanisms under stress conditions (<xref ref-type="bibr" rid="B7">Anjali et&#xa0;al., 2023</xref>). <xref ref-type="bibr" rid="B51">Rao et&#xa0;al. (2024)</xref> reported that drought can trigger either an increase or a decrease in DNA methylation, depending on the plant species. For example, <xref ref-type="bibr" rid="B77">Zi et&#xa0;al. (2024)</xref> demonstrated a decrease in DNA methylation in <italic>Medicago ruthenica</italic> due to drought, while <xref ref-type="bibr" rid="B60">Tobiasz-Salach et&#xa0;al. (2023)</xref> observed an increase in methylation in corn exposed to salinity stress. In our experiments, the 5mC level in all buckwheat cultivars under drought stress was higher than in control, with the increase being statistically significant in La Harpe and Smuga. Still,&#xa0;nonsignificant in Panda (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>). Higher 5mC levels in stressed plants may be related to the suppression of genes associated&#xa0;with growth and the activation of genes responsible for drought tolerance.</p>
<p>La Harpe buckwheat appears to be the most sensitive to drought stress based on several parameters, including significantly higher levels of 5mC in leaves under drought conditions than the Panda and Smuga varieties. These results support the claim by <xref ref-type="bibr" rid="B51">Rao et&#xa0;al. (2024)</xref> that the effect of drought on DNA methylation is species-specific, and in our case, they further extend knowledge of specificity to the genotype level within a single species. Similar genotype-specific responses were also observed in a study by <xref ref-type="bibr" rid="B77">Zi et&#xa0;al. (2024)</xref>, where different genotypes showed different regulation of gene expression and 5mC levels under drought conditions.</p>
<p>Silicon application enhances plant stress tolerance by modulating the expression of stress-related genes. For example, the effect of Si on gene expression and increased 5mC levels has been demonstrated in <italic>Arabidopsis</italic> under UV-B stress (<xref ref-type="bibr" rid="B17">Celayir et&#xa0;al., 2023</xref>), and in maize and wheat under salinity stress (<xref ref-type="bibr" rid="B60">Tobiasz-Salach et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B61">2024</xref>). These molecular responses contributed to improved plant adaptation to stressful environments through modifications of biochemical and physiological traits. Similar biochemical and physiological changes were observed in our buckwheat experiment. However, under drought conditions, foliar Si application did not result in statistically significant changes in leaf 5mC levels in any of the tested cultivars (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>). In contrast, under control (non-stress) conditions, foliar Si application led to a statistically significant increase in 5mC levels in all varieties. This suggests that Si can induce epigenetic changes even in the absence of stress, which is consistent with the results of <xref ref-type="bibr" rid="B71">Ye&#x15f;ildirek et&#xa0;al. (2024)</xref>, who described DNA hypermethylation after Si application in control plants of <italic>Arabidopsis thaliana</italic>. These results raise the possibility that pre-stress foliar application of Si may enhance plant resilience and preparedness for future drought events. This could have practical agronomic relevance, particularly in regions with frequent drought episodes during the growing season.</p>
</sec>
<sec id="s3_8">
<label>3.8</label>
<title>Pigment content</title>
<p>Chlorophyll <italic>a</italic> (Chl <italic>a</italic>) plays a key role in capturing and transferring light energy in chloroplasts, while chlorophyll <italic>b</italic> (Chl <italic>b</italic>) and carotenoids expand the spectrum of usable light in photosynthesis. Chlorophylls, particularly Chl <italic>a</italic>, are generally more prone to drought-induced degradation than carotenoids, which also play a protective function by stabilizing the photosynthetic apparatus and reducing oxidative stress (<xref ref-type="bibr" rid="B54">Saja-Garbarz et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B59">Thorne et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B55">Sattar et&#xa0;al., 2023</xref>).</p>
<p>As shown in <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>, drought stress significantly reduced the levels of photosynthetically active pigments (Chl <italic>a</italic>, Chl <italic>b</italic>, total chlorophyll, and carotenoids) in all buckwheat cultivars. Foliar Si application (Control + Si) stabilized the photosynthetic apparatus and increased pigment content across all varieties. These findings are in line with studies reporting that Si, particularly in nanoparticle form, can increase pigment levels even under non-stress conditions (<xref ref-type="bibr" rid="B4">Akhtar and Ilyas, 2022</xref>; <xref ref-type="bibr" rid="B6">Al-Selwey et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B57">Sharf-Eldin et&#xa0;al., 2023</xref>). In our experiment, La Harpe and Panda responded to Si with a significant pigment increase even under regular irrigation, while Smuga showed a similar, though nonsignificant, trend&#x2014;indicating genotypic variability (<xref ref-type="bibr" rid="B11">Azad et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B59">Thorne et&#xa0;al., 2021</xref>).</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Effect of foliar application of silicon on pigment content of different buckwheat varieties under drought conditions.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Variety</th>
<th valign="middle" align="center">Treatment</th>
<th valign="middle" align="center">
<italic>Chl a</italic> (mg m<sup>-2</sup>)</th>
<th valign="middle" align="center">
<italic>Chl b</italic> (mg m<sup>-2</sup>)</th>
<th valign="middle" align="center">
<italic>Total chlorophyll</italic> (mg m<sup>-2</sup>)</th>
<th valign="middle" align="center">
<italic>Carotenoids</italic> (mg m<sup>-2</sup>)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="4" align="center">La Harpe</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="center">303.09 &#xb1; 1.90<sup>c</sup>
</td>
<td valign="middle" align="center">94.53 &#xb1; 1.36<sup>d</sup>
</td>
<td valign="middle" align="center">398.40 &#xb1; 4.25<sup>c</sup>
</td>
<td valign="middle" align="center">62.09 &#xb1; 1.13<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="center">227.35 &#xb1; 15.08<sup>a</sup>
</td>
<td valign="middle" align="center">62.59 &#xb1; 4.31<sup>a</sup>
</td>
<td valign="middle" align="center">292.58 &#xb1; 16.75<sup>a</sup>
</td>
<td valign="middle" align="center">48.50 &#xb1; 3.02<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="center">414.79 &#xb1; 35.77<sup>g</sup>
</td>
<td valign="middle" align="center">145.19 &#xb1; 25.42<sup>f</sup>
</td>
<td valign="middle" align="center">559.82 &#xb1; 68.49<sup>e</sup>
</td>
<td valign="middle" align="center">86.49 &#xb1; 9.77<sup>e</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="center">294.15 &#xb1; 16.00<sup>b</sup>
</td>
<td valign="middle" align="center">88.80 &#xb1; 5.15<sup>d</sup>
</td>
<td valign="middle" align="center">382.95 &#xb1; 23.54<sup>b</sup>
</td>
<td valign="middle" align="center">63.53 &#xb1; 1.98<sup>c</sup>
</td>
</tr>
<tr>
<td valign="middle" rowspan="4" align="center">Panda</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="center">340.88 &#xb1; 14.69<sup>d</sup>
</td>
<td valign="middle" align="center">98.34 &#xb1; 7.29<sup>d</sup>
</td>
<td valign="middle" align="center">442.69 &#xb1; 21.29<sup>c</sup>
</td>
<td valign="middle" align="center">71.92 &#xb1; 2.06<sup>c</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="center">305.04 &#xb1; 11.61<sup>c</sup>
</td>
<td valign="middle" align="center">88.33 &#xb1; 0.33<sup>c</sup>
</td>
<td valign="middle" align="center">393.32 &#xb1; 11.93<sup>b</sup>
</td>
<td valign="middle" align="center">62.90 &#xb1; 2.76<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="center">400.85 &#xb1; 8.57<sup>f</sup>
</td>
<td valign="middle" align="center">125.81 &#xb1; 5.93<sup>e</sup>
</td>
<td valign="middle" align="center">526.66 &#xb1; 17.57<sup>d</sup>
</td>
<td valign="middle" align="center">80.66 &#xb1; 1.72<sup>d</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="center">310.18 &#xb1; 22.92<sup>d</sup>
</td>
<td valign="middle" align="center">90.09 &#xb1; 10.25<sup>d</sup>
</td>
<td valign="middle" align="center">400.27 &#xb1; 35.45<sup>c</sup>
</td>
<td valign="middle" align="center">63.12 &#xb1; 3.21<sup>b</sup>
</td>
</tr>
<tr>
<td valign="middle" rowspan="4" align="center">Smuga</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="center">356.39 &#xb1; 9.12<sup>e</sup>
</td>
<td valign="middle" align="center">112.67 &#xb1; 2.25<sup>e</sup>
</td>
<td valign="middle" align="center">469.06 &#xb1; 5.41<sup>d</sup>
</td>
<td valign="middle" align="center">74.21 &#xb1; 0.27<sup>d</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="center">304.58 &#xb1; 10.28<sup>c</sup>
</td>
<td valign="middle" align="center">85.34 &#xb1; 3.63<sup>b</sup>
</td>
<td valign="middle" align="center">389.92 &#xb1; 13.90<sup>b</sup>
</td>
<td valign="middle" align="center">64.78 &#xb1; 2.88<sup>c</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="center">376.64 &#xb1; 9.42<sup>e</sup>
</td>
<td valign="middle" align="center">128.63 &#xb1; 8.66<sup>e</sup>
</td>
<td valign="middle" align="center">507.61 &#xb1; 15.74<sup>d</sup>
</td>
<td valign="middle" align="center">82.27 &#xb1; 2.51<sup>d</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="center">325.74 &#xb1; 8.48<sup>d</sup>
</td>
<td valign="middle" align="center">92.60 &#xb1; 4.60<sup>d</sup>
</td>
<td valign="middle" align="center">417.73 &#xb1; 12.48<sup>c</sup>
</td>
<td valign="middle" align="center">68.23 &#xb1; 1.26<sup>c</sup>
</td>
</tr>
<tr>
<td valign="middle" colspan="2" align="center">Kruskal-Wallis ANOVA</td>
<td valign="middle" align="center">52,46</td>
<td valign="middle" align="center">51,94</td>
<td valign="middle" align="center">52,24</td>
<td valign="middle" align="center">53,12</td>
</tr>
<tr>
<td valign="middle" colspan="2" align="center">
<italic>p</italic>
</td>
<td valign="middle" align="center">&lt;0.001</td>
<td valign="middle" align="center">&lt;0.001</td>
<td valign="middle" align="center">&lt;0.001</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Different letters indicate statistically significant differences among treatments (&#x3b1; = 0.05).</p>
</table-wrap-foot>
</table-wrap>
<p>Under drought, Si-treated plants maintained higher pigment levels than those without Si application, confirming the protective role of Si observed in other crops (<xref ref-type="bibr" rid="B38">Maghsoudi et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B3">Ahsan et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B45">Ning et&#xa0;al., 2023</xref>). Drought typically leads to chlorophyll degradation, whereas Si improves water retention, RWC and osmotic potential (&#x3a8;<sub>s</sub>), and stabilizes the photosynthetic apparatus (<xref ref-type="bibr" rid="B54">Saja-Garbarz et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B55">Sattar et&#xa0;al., 2023</xref>). Our results suggest that exogenous Si helps protect photosynthetic pigments from oxidative damage, potentially preserving photosynthetic activity under drought conditions (<xref ref-type="bibr" rid="B6">Al-Selwey et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B57">Sharf-Eldin et&#xa0;al., 2023</xref>). This protective effect of Si was reflected in chlorophyll levels, which increased significantly in all three cultivars. However, a statistically significant rise in carotenoids was observed only in La Harpe, which also exhibited the lowest overall pigment content under water deficit conditions, indicating its higher sensitivity compared to Panda and Smuga.</p>
</sec>
<sec id="s3_9">
<label>3.9</label>
<title>Maximum quantum efficiency of PSII</title>
<p>The maximum quantum efficiency of photosystem II (Fv/Fm) is one of the most commonly used parameters for evaluating the state of the photosynthetic apparatus through chlorophyll fluorescence. Under non-stress conditions, Fv/Fm values usually range from 0.79 to 0.85. A decrease in this value indicates damage to PSII and a reduction in photosynthetic activity, often because of stress (<xref ref-type="bibr" rid="B36">Maghsoudi et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B75">Zhang et&#xa0;al., 2018</xref>).</p>
<p>In all treatment groups in our study, Fv/Fm values ranged from 0.82 to 0.84 (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>). The differences between the groups were statistically nonsignificant, suggesting that the imposed level of drought stress did not compromise the stability of PSII. This is consistent with the literature stating that Fv/Fm remains stable until plants face severe stress (<xref ref-type="bibr" rid="B27">Hajizadeh et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B32">Kalal et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B41">Morshedloo et&#xa0;al., 2025</xref>).</p>
<table-wrap id="T3" position="float">
<label>Table&#xa0;3</label>
<caption>
<p>Effect of foliar application of silicon on Fv/Fm, <italic>A</italic>, <italic>E</italic>, <italic>g<sub>s</sub>
</italic>, WUE and WUE<sub>i</sub> of different buckwheat varieties under drought conditions.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Variety</th>
<th valign="middle" align="center">Treatment</th>
<th valign="middle" align="center">
<italic>Fv/Fm</italic>
</th>
<th valign="middle" align="center">
<italic>E</italic> (mmol H<sub>2</sub>O m<sup>-2</sup> s<sup>-1</sup>)</th>
<th valign="middle" align="center">
<italic>g<sub>s</sub>
</italic> (mol H<sub>2</sub>O m<sup>-2</sup> s<sup>-1</sup>)</th>
<th valign="middle" align="center">
<italic>A</italic> (&#x3bc;mol CO<sub>2</sub> m<sup>-2</sup> s<sup>-1</sup>)</th>
<th valign="middle" align="center">
<italic>WUE</italic>
</th>
<th valign="middle" align="center">
<italic>WUE<sub>i</sub>
</italic>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="4" align="center">La Harpe</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="left">0.84 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">2.04 &#xb1; 0.74<sup>b</sup>
</td>
<td valign="middle" align="left">0.15 &#xb1; 0.09<sup>b</sup>
</td>
<td valign="middle" align="left">19.23 &#xb1; 0.65<sup>a</sup>
</td>
<td valign="middle" align="left">7.55 &#xb1; 2.72<sup>a</sup>
</td>
<td valign="middle" align="left">105.97 &#xb1; 56.53<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">0.8 &#xb1; 0.33<sup>a</sup>
</td>
<td valign="middle" align="left">0.05 &#xb1; 0.02<sup>a</sup>
</td>
<td valign="middle" align="left">4.85 &#xb1; 1.49<sup>b</sup>
</td>
<td valign="middle" align="left">6.10 &#xb1; 0.78<sup>b</sup>
</td>
<td valign="middle" align="left">110.36 &#xb1; 23.22<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="left">0.84 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">2.6 &#xb1; 0.32<sup>c</sup>
</td>
<td valign="middle" align="left">0.21 &#xb1; 0.04<sup>c</sup>
</td>
<td valign="middle" align="left">21.66 &#xb1; 1.75<sup>c</sup>
</td>
<td valign="middle" align="left">8.28 &#xb1; 2.28<sup>a</sup>
</td>
<td valign="middle" align="left">102.33 &#xb1; 37.28<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">1.67 &#xb1; 0.37<sup>b</sup>
</td>
<td valign="middle" align="left">0.11 &#xb1; 0.03<sup>b</sup>
</td>
<td valign="middle" align="left">18.51 &#xb1; 2.11<sup>a</sup>
</td>
<td valign="middle" align="left">11.55 &#xb1; 0.65<sup>a</sup>
</td>
<td valign="middle" align="left">175.36 &#xb1; 16.36<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" rowspan="4" align="center">Panda</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="left">0.83 &#xb1; 0.02<sup>a</sup>
</td>
<td valign="middle" align="left">2.14 &#xb1; 0.23<sup>b</sup>
</td>
<td valign="middle" align="left">0.16 &#xb1; 0.03<sup>b</sup>
</td>
<td valign="middle" align="left">19.86 &#xb1; 2.07<sup>a</sup>
</td>
<td valign="middle" align="left">8.91 &#xb1; 0.61<sup>a</sup>
</td>
<td valign="middle" align="left">121.23 &#xb1; 14.86<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="left">0.82 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">0.92 &#xb1; 0.36<sup>a</sup>
</td>
<td valign="middle" align="left">0.06 &#xb1; 0.02<sup>a</sup>
</td>
<td valign="middle" align="left">9.55 &#xb1; 3.87<sup>b</sup>
</td>
<td valign="middle" align="left">11.98 &#xb1; 2.14<sup>a</sup>
</td>
<td valign="middle" align="left">219.67 &#xb1; 46.94<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">2.19 &#xb1; 0.06<sup>b</sup>
</td>
<td valign="middle" align="left">0.16 &#xb1; 0.01<sup>b</sup>
</td>
<td valign="middle" align="left">20.99 &#xb1; 0.93<sup>c</sup>
</td>
<td valign="middle" align="left">9.43 &#xb1; 0.75<sup>a</sup>
</td>
<td valign="middle" align="left">132.43 &#xb1; 12.78<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="left">0.82 &#xb1; 0.02<sup>a</sup>
</td>
<td valign="middle" align="left">1.48 &#xb1; 0.39<sup>b</sup>
</td>
<td valign="middle" align="left">0.1 &#xb1; 0.03<sup>b</sup>
</td>
<td valign="middle" align="left">16.10 &#xb1; 1.96<sup>a</sup>
</td>
<td valign="middle" align="left">11.63 &#xb1; 0.72<sup>a</sup>
</td>
<td valign="middle" align="left">181.11 &#xb1; 28.16<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" rowspan="4" align="center">Smuga</td>
<td valign="middle" align="left">Control</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">2.24 &#xb1; 0.13<sup>c</sup>
</td>
<td valign="middle" align="left">0.17 &#xb1; 0.02<sup>c</sup>
</td>
<td valign="middle" align="left">24.20 &#xb1; 1.66<sup>c</sup>
</td>
<td valign="middle" align="left">10.32 &#xb1; 0.86<sup>a</sup>
</td>
<td valign="middle" align="left">135.71 &#xb1; 15.43<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">1.62 &#xb1; 0.84<sup>b</sup>
</td>
<td valign="middle" align="left">0.11 &#xb1; 0.07<sup>b</sup>
</td>
<td valign="middle" align="left">15.51 &#xb1; 11.5<sup>a</sup>
</td>
<td valign="middle" align="left">10.45 &#xb1; 1.27<sup>a</sup>
</td>
<td valign="middle" align="left">176.25 &#xb1; 22.50<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Control + Si</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">2.2 &#xb1; 0.26<sup>b</sup>
</td>
<td valign="middle" align="left">0.16 &#xb1; 0.03<sup>b</sup>
</td>
<td valign="middle" align="left">21.20 &#xb1; 2.14<sup>c</sup>
</td>
<td valign="middle" align="left">9.94 &#xb1; 1.50<sup>a</sup>
</td>
<td valign="middle" align="left">131.24 &#xb1; 22.90<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left">Drought + Si</td>
<td valign="middle" align="left">0.83 &#xb1; 0.01<sup>a</sup>
</td>
<td valign="middle" align="left">1.42 &#xb1; 0.27<sup>b</sup>
</td>
<td valign="middle" align="left">0.08 &#xb1; 0.03<sup>b</sup>
</td>
<td valign="middle" align="left">16.61 &#xb1; 1.44<sup>a</sup>
</td>
<td valign="middle" align="left">11.90 &#xb1; 1.58<sup>a</sup>
</td>
<td valign="middle" align="left">203.13 &#xb1; 50.81<sup>a</sup>
</td>
</tr>
<tr>
<td valign="middle" colspan="2" align="left">Kruskal-Wallis ANOVA</td>
<td valign="middle" align="left">20,00</td>
<td valign="middle" align="left">49,014</td>
<td valign="middle" align="left">49,14</td>
<td valign="middle" align="left">46,68</td>
<td valign="middle" align="left">30,93</td>
<td valign="middle" align="left">37,61</td>
</tr>
<tr>
<td valign="middle" colspan="2" align="left">
<italic>p</italic>
</td>
<td valign="middle" align="left">0.0453</td>
<td valign="middle" align="left">&lt;0.001</td>
<td valign="middle" align="left">&lt;0.001</td>
<td valign="middle" align="left">&lt;0.001</td>
<td valign="middle" align="left">0.001</td>
<td valign="middle" align="left">&lt;0.001</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Different letters indicate statistically significant differences among treatments (&#x3b1; = 0.05).</p>
</table-wrap-foot>
</table-wrap>
<p>However, if plants activate effective defense mechanisms, such as increased production of antioxidants (TFC and TAC under drought conditions), the adverse effects of stress on PSII can be minimized, with Fv/Fm values close to normal (<xref ref-type="bibr" rid="B75">Zhang et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B39">Mahmoud et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B30">Hossain et&#xa0;al., 2024</xref>). This is further supported by our findings, which are in agreement with earlier studies reporting stable Fv/Fm values under mild to moderate drought stress when protective responses are effectively triggered (<xref ref-type="bibr" rid="B36">Maghsoudi et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B43">Mukarram et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B41">Morshedloo et&#xa0;al., 2025</xref>).</p>
</sec>
<sec id="s3_10">
<label>3.10</label>
<title>Net photosynthetic rate</title>
<p>The net photosynthetic rate (<italic>A</italic>) reflects the efficiency of CO<sub>2</sub> fixation by the plant during photosynthesis. Drought generally inhibits photosynthetic activity by stomatal closure, which reduces CO<sub>2</sub> uptake, but can also cause damage to PSII (<xref ref-type="bibr" rid="B31">Hussain et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B13">Bashir et&#xa0;al., 2021</xref>). Foliar Si application can enhance <italic>A</italic> under drought conditions (<xref ref-type="bibr" rid="B75">Zhang et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B5">Alam et&#xa0;al., 2024</xref>) by increasing water availability through reduction in transpiration (<xref ref-type="bibr" rid="B21">Cooke and Carey, 2023</xref>), by protecting chloroplasts for more efficient light absorption (<xref ref-type="bibr" rid="B15">Bhardwaj and Kapoor, 2021</xref>), and by reducing oxidative stress through increased antioxidant levels (TFC, TAC) (<xref ref-type="bibr" rid="B42">Mukarram et&#xa0;al., 2023</xref>).</p>
<p>Our results under drought conditions showed a significant decrease in <italic>A</italic> in all three buckwheat varieties (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>). La Harpe and Panda, which were subjected to water deficit, showed lower <italic>A</italic>, <italic>E</italic> and <italic>g<sub>s</sub>
</italic> compared with the Smuga variety, indicating their higher sensitivity to drought stress, and the greater drought resistance of Smuga buckwheat. These results are in agreement with the studies of <xref ref-type="bibr" rid="B13">Bashir et&#xa0;al. (2021)</xref> and <xref ref-type="bibr" rid="B46">Nyaupane et&#xa0;al. (2024)</xref>, which also indicated that drought stress caused a decrease in <italic>A</italic>, <italic>E</italic> and <italic>g<sub>s</sub>
</italic>, and that there were significant varietal differences in plant responses to drought (<xref ref-type="bibr" rid="B31">Hussain et&#xa0;al., 2019</xref>).</p>
<p>Si application significantly increased <italic>A</italic> for Control + Si and especially for Drought + Si in the La Harpe and Panda varieties. In Smuga, the effect of Si on <italic>A</italic> was not statistically significant. Similar varietal variations in response to Si application have been documented by <xref ref-type="bibr" rid="B59">Thorne et&#xa0;al. (2021)</xref>. As demonstrated by other physiological parameters, we showed that Si application contributed to the increased drought tolerance of La Harpe and Panda. Improvement in photosynthetic activity after Si application under drought conditions was also reported by <xref ref-type="bibr" rid="B75">Zhang et&#xa0;al. (2018)</xref>; <xref ref-type="bibr" rid="B15">Bhardwaj and Kapoor (2021)</xref> and <xref ref-type="bibr" rid="B5">Alam et&#xa0;al. (2024)</xref>. In the Smuga variety, other drought tolerance mechanisms that were not activated in the more susceptible cultivars appeared to be involved. <xref ref-type="bibr" rid="B46">Nyaupane et&#xa0;al. (2024)</xref> also pointed out the potential differences in physiological mechanisms of drought resistance within a single species.</p>
</sec>
<sec id="s3_11">
<label>3.11</label>
<title>Transpiration rate (<italic>E</italic>) and stomatal conductance (<italic>g<sub>s</sub>
</italic>)</title>
<p>The stomata regulate both CO<sub>2</sub> input for photosynthesis and water vapor output during transpiration; therefore, stomatal conductance, <italic>g<sub>s</sub>
</italic>, represents a plant&#x2019;s efficiency in regulating gaseous fluxes between the cells and the atmosphere. Under drought conditions, there is a decrease in <italic>g<sub>s</sub>
</italic> and <italic>E</italic> as plants wholly or partially close stomata to minimize water loss (<xref ref-type="bibr" rid="B1">Adjah et&#xa0;al., 2025</xref>). Foliar application of Si can improve leaf water balance, stabilize membranes, and decrease <italic>g<sub>s</sub>
</italic> and <italic>E</italic> (<xref ref-type="bibr" rid="B15">Bhardwaj and Kapoor, 2021</xref>; <xref ref-type="bibr" rid="B6">Al-Selwey et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B44">Nazim et&#xa0;al., 2024</xref>).</p>
<p>Our results demonstrated a significant reduction in <italic>g<sub>s</sub>
</italic> and <italic>E</italic> in all three buckwheat varieties in a drought (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>), accompanied by a decrease in <italic>A</italic>. The La Harpe and Panda varieties again showed greater drought sensitivity through significantly lower <italic>g<sub>s</sub>
</italic>, <italic>E</italic> and <italic>A</italic> values relative to Smuga. Genotypic variation in drought tolerance mechanisms within a species has been highlighted in <xref ref-type="bibr" rid="B56">Shams et&#xa0;al. (2022)</xref> and <xref ref-type="bibr" rid="B46">Nyaupane et&#xa0;al. (2024)</xref>.</p>
<p>Foliar application of Si significantly increased <italic>g<sub>s</sub>
</italic> and <italic>E</italic> in La Harpe in both Control + Si and Drought + Si treatments, and in Panda with Drought + Si treatment. The beneficial effects of Si on <italic>g<sub>s</sub>
</italic> and <italic>E</italic> in cotton plants were described by <xref ref-type="bibr" rid="B33">Khalequzzaman et&#xa0;al. (2024)</xref> under both control and stress conditions. Similar results were also reported by <xref ref-type="bibr" rid="B15">Bhardwaj and Kapoor (2021)</xref>; <xref ref-type="bibr" rid="B38">Maghsoudi et&#xa0;al. (2016)</xref>; <xref ref-type="bibr" rid="B74">Zhang et&#xa0;al. (2017)</xref> and <xref ref-type="bibr" rid="B44">Nazim et&#xa0;al. (2024)</xref>. However, in the Smuga cultivar, the application of Si did not increase <italic>g<sub>s</sub>
</italic> and <italic>E</italic>, nor did it even lead to a slight decrease. This suggests that different resistance mechanisms, such as more efficient osmotic regulation, might be involved in this buckwheat variety, as evidenced by the highest proline accumulation recorded in the Drought + Si group.</p>
</sec>
<sec id="s3_12">
<label>3.12</label>
<title>Water use efficiency</title>
<p>Instantaneous water use efficiency (WUE) is defined as the ratio of <italic>A</italic> to <italic>E</italic>, while internal water use efficiency (WUE<sub>i</sub>) is expressed as the ratio of <italic>A</italic> to <italic>g<sub>s</sub>
</italic>. WUE<sub>i</sub> indicates how efficiently a plant uses CO<sub>2</sub> for photosynthesis at a given stomatal opening level (<xref ref-type="bibr" rid="B76">Zhu et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B35">Liang et&#xa0;al., 2023</xref>).</p>
<p>In our study, the WUE parameter was significantly lower only in La Harpe under water deficit conditions, indicating that the decrease in <italic>A</italic> was more pronounced than the decrease in <italic>E</italic>, probably due to a non-stomatal limitation of photosynthesis. In contrast, Si treatment of La Harpe in drought showed a significant increase in WUE. No statistically significant differences in WUE values were observed in the other varieties or treatment groups. Thus, the results confirmed the beneficial effect of Si on WUE only in the La Harpe plants. Similarly, <xref ref-type="bibr" rid="B39">Mahmoud et&#xa0;al. (2023)</xref> showed an increase in WUE after Si application in coriander. Meanwhile, <xref ref-type="bibr" rid="B35">Liang et&#xa0;al. (2023)</xref> concluded that genetic factors could significantly affect WUE and WUE<sub>i</sub>. WUE<sub>i</sub> did not show significant differences among the buckwheat varieties evaluated in the different groups. However, higher WUE<sub>i</sub> values were recorded under water deficit compared to the Control, which may be attributed to the drought-induced decrease in <italic>g<sub>s</sub>
</italic>. Similar findings were reported by <xref ref-type="bibr" rid="B12">Barratt et&#xa0;al. (2023)</xref> for sugar beets and <xref ref-type="bibr" rid="B28">Han et&#xa0;al. (2023)</xref> for cotton. <xref ref-type="bibr" rid="B44">Nazim et&#xa0;al. (2024)</xref> also reported that plants responded to water deficit by closing stomata, thus increasing WUE<sub>i</sub> as an adaptive response to limited water availability.</p>
</sec>
<sec id="s3_13">
<label>3.13</label>
<title>Group correlation analysis</title>
<p>A broad set of monitored physiological and biochemical parameters enabled the identification of traits in which buckwheat varieties differ in drought tolerance and response to foliar silicon application. Under drought stress, buckwheat plants exhibit several changes in their habitus, including reduced vegetative growth (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S1</bold>
</xref>). A group correlation analysis was performed to further evaluate different varieties&#x2019; physiological integrity and stress response. Parameters were classified into two functional categories: traits associated with physiological performance and plant vitality (&#x201c;health&#x201d;), and traits involved in stress response and defense mechanisms (&#x201c;defense&#x201d;), as defined in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>.</p>
<p>The average intergroup correlation values (health&#x2013;defense) are summarized in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>. Under drought conditions, the Smuga variety exhibited the highest health&#x2013;defense correlation (0.07), indicating a relatively well-preserved coordination between physiological functioning and defense activation. In contrast, Panda and La Harpe showed weaker or even negative correlations (0.02 and &#x2212;0.04, respectively), suggesting impaired physiological integration under water deficit.</p>
<p>Following foliar Si application, health&#x2013;defense correlations improved in all varieties, most notably in Smuga (&#x394; = +0.18), followed by Panda (&#x394; = +0.15) and La Harpe (&#x394; = +0.08). These findings suggest that silicon can improve systemic physiological coordination under drought across buckwheat varieties differing in stress sensitivity. Notably, the strongest improvement observed in Smuga indicates that even drought-tolerant varieties may significantly benefit from silicon in terms of maintaining functional integrity under stress conditions.</p>
</sec>
</sec>
<sec id="s4" sec-type="conclusions">
<label>4</label>
<title>Conclusions</title>
<p>The study results showed that buckwheat&#x2019;s response to water stress, including changes in physiological activity, stress responses and the involvement of defense mechanisms, is variety-specific. The Smuga variety showed the highest level of tolerance to drought, while Panda was moderately sensitive among the evaluated varieties, and La Harpe was the most sensitive to water stress. Foliar silicon application improved physiological parameters and plant resistance under drought conditions. The strongest improvement in Smuga, determined by group correlation analysis, suggests that even drought-tolerant varieties can significantly benefit from strengthening the systemic physiological integrity of plants when foliar Si is applied. This confirms the potential of Si to mitigate the negative impact of drought and highlights the importance of varietal variability in assessing plant stress tolerance mechanisms.</p>
</sec>
</body>
<back>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>. Further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s6" sec-type="author-contributions">
<title>Author contributions</title>
<p>JKr: Investigation, Conceptualization, Formal analysis, Methodology, Visualization, Software, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. VH: Conceptualization, Supervision, Methodology, Software, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. PV: Methodology, Investigation, Software, Writing &#x2013; review &amp; editing. AG: Investigation, Formal analysis, Visualization, Writing &#x2013; review &amp; editing. JKu: Formal analysis, Methodology, Writing &#x2013; original draft. MP: Methodology, Formal analysis, Writing &#x2013; original draft. MS: Funding acquisition, Supervision, Project administration, Writing &#x2013; review &amp; editing.</p>
</sec>
<sec id="s7" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research and/or publication of this article. This work was supported by the Czech Science Foundation (GACR) Project No. 23&#x2013;04221 L.</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>The authors would like to thank Ing. Veronika Petru and Ing. Laura Tamayo for helping in seed and laboratory essential procurement.</p>
</ack>
<sec id="s8" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s9" sec-type="ai-statement">
<title>Generative AI statement</title>
<p>The author(s) declare that no Generative AI was used in the creation of this manuscript.</p>
<p>Any alternative text (alt text) provided alongside figures in this article has been generated by Frontiers with the support of artificial intelligence and reasonable efforts have been made to ensure accuracy, including review by the authors wherever possible. If you identify any issues, please contact us.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fpls.2025.1635709/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fpls.2025.1635709/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
</sec>
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