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<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2025.1635702</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Deciphering the resistance mechanism to <italic>Fusarium</italic> wilt and stem rot of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> using histopathology aspects</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Galvis-Tarazona</surname>
<given-names>Daicy</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<contrib contrib-type="author">
<name>
<surname>Boh&#xf3;rquez-Quintero</surname>
<given-names>Mar&#xed;a</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Arias-Moreno</surname>
<given-names>Diana</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<contrib contrib-type="author">
<name>
<surname>Ojeda-P&#xe9;rez</surname>
<given-names>Zaida</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<aff id="aff1">
<sup>1</sup>
<institution>Research Group BIOPLASMA-UPTC, Faculty of Sciences, Universidad Pedag&#xf3;gica y Tecnol&#xf3;gica de Colombia</institution>, <addr-line>Tunja</addr-line>,&#xa0;<country>Colombia</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Plant Molecular Biotechnology Laboratory, Division of Molecular Biology, Instituto Potosino de Investigaci&#xf3;n Cient&#xed;fica y Tecnol&#xf3;gica AC</institution>, <addr-line>San Luis Potos&#xed;</addr-line>,&#xa0;<country>Mexico</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Research Group in Biotechnology and Agricultural Production, Faculty of Agronomy Engineering, Plant Production and Health Department, Universidad del Tolima</institution>, <addr-line>Ibagu&#xe9;</addr-line>,&#xa0;<country>Colombia</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/693982/overview">Solomon Abate Mekonnen</ext-link>, Ethiopian Institute of Agricultural Research, Ethiopia</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1163917/overview">Malkhan Singh Gurjar</ext-link>, Indian Agricultural Research Institute (ICAR), India</p>
<p>Sergii Krysenko, Valent BioSciences LLC, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1782721/overview">Afeez Adesina Adedayo</ext-link>, Western Illinois University, United States</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Diana Arias-Moreno, <email xlink:href="mailto:dmariasm@ut.edu.co">dmariasm@ut.edu.co</email>
</p>
</fn>
<fn fn-type="other" id="fn003">
<p>&#x2020;ORCID: Daicy Galvis-Tarazona, <uri xlink:href="https://orcid.org/0000-0002-2251-0015">orcid.org/0000-0002-2251-0015</uri>; Mar&#xed;a Boh&#xf3;rquez-Quintero, <uri xlink:href="https://orcid.org/0000-0003-1919-4346">orcid.org/0000-0003-1919-4346</uri>; Diana Arias-Moreno, <uri xlink:href="https://orcid.org/0000-0001-6171-0549">orcid.org/0000-0001-6171-0549</uri>; Zaida Ojeda-P&#xe9;rez, <uri xlink:href="https://orcid.org/0000-0003-1630-6699">orcid.org/0000-0003-1630-6699</uri>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>07</day>
<month>10</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>16</volume>
<elocation-id>1635702</elocation-id>
<history>
<date date-type="received">
<day>26</day>
<month>05</month>
<year>2025</year>
</date>
<date date-type="accepted">
<day>15</day>
<month>09</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Galvis-Tarazona, Boh&#xf3;rquez-Quintero, Arias-Moreno and Ojeda-P&#xe9;rez.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Galvis-Tarazona, Boh&#xf3;rquez-Quintero, Arias-Moreno and Ojeda-P&#xe9;rez</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<sec>
<title>Introduction</title>
<p>
<italic>Passiflora maliformis</italic> is a wild genotype of passionflower with antimicrobial activity and broad phytochemical properties, highlighting its potential as a genetic resource for crop improvement. Given that commercial passionflowers are severely affected by vascular wilt and stem rot caused by <italic>Fusarium oxysporum</italic> and <italic>F. solani</italic>, this study aimed to elucidate the resistance mechanisms of <italic>P. maliformis</italic> var. <italic>pubescens</italic> against these pathogens, with emphasis on histopathological aspects.</p>
</sec>
<sec>
<title>Methods</title>
<p>Pathogenicity tests were performed on seedlings germinated <italic>in vitro</italic> and <italic>ex vitro</italic> (SI and SE). Survival, disease incidence, and severity were evaluated in inoculated and non-inoculated plants. In addition, histopathological analyses of roots and stems were performed to characterize structural changes, defense responses, and pathogen colonization.</p>
</sec>
<sec>
<title>Results</title>
<p>The genotype exhibited high survival rates and reduced incidence and severity of Fusarium wilt and stem rot, with minimal damage to internal and external tissues. Comparable shoot and root development was observed between inoculated and control plants, indicating the effectiveness of defense mechanisms that maintained physiological performance. Histopathological examination revealed reinforced cell walls, limited pathogen penetration, and restricted vascular colonization.</p>
</sec>
<sec>
<title>Conclusion</title>
<p>
<italic>P. maliformis</italic> var. <italic>pubescens</italic> demonstrated high responsiveness against <italic>F. oxysporum</italic> and <italic>F. solani</italic>, supporting their role as a potential resistant rootstock. These findings underscore the value of this wild genotype as a strategic genetic resource for breeding programs, integrated disease management, and the sustainable improvement of commercial passionflower crops.</p>
</sec>
</abstract>
<kwd-group>
<kwd>Fusarium wilt</kwd>
<kwd>stem rot</kwd>
<kwd>
<italic>Passiflora maliformis</italic>
</kwd>
<kwd>histopathology</kwd>
<kwd>disease resistance</kwd>
<kwd>rootstock potential</kwd>
</kwd-group>
<contract-sponsor id="cn001">Ministerio de Ciencia, Tecnolog&#xed;a e Innovaci&#xf3;n<named-content content-type="fundref-id">10.13039/100022965</named-content>
</contract-sponsor>
<counts>
<fig-count count="7"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="84"/>
<page-count count="14"/>
<word-count count="5348"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Plant Pathogen Interactions</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>The genus <italic>Passiflora</italic>, comprising more than 520 recognized species, its a taxonomic group of substantial ethnobotanical, horticultural, medicinal, and economic importance (<xref ref-type="bibr" rid="B43">Moraes et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B48">O&#x17c;arowski and Karpi&#x144;ski, 2021</xref>). Its cultivation is predominantly concentrated in tropical and subtropical regions, with Brazil, Colombia, Peru, and Ecuador standing out as the main producers in South America (<xref ref-type="bibr" rid="B20">Fischer et&#xa0;al., 2021</xref>). Notably, Colombia is acknowledged as one of the principal centers of genetic diversity, as its heterogeneous agroecological conditions provide optimal environments for the cultivation and diversification of multiple species (<xref ref-type="bibr" rid="B36">Mart&#xed;nez et&#xa0;al., 2020</xref>).</p>
<p>In Colombia, the commercial cultivation of passionflowers encompasses taxa of significant agronomic, nutritional, and economic importance, including yellow passion fruit (<italic>Passiflora edulis</italic> f. <italic>flavicarpa</italic> Degener, locally known as maracuy&#xe1;), purple passion fruit (<italic>P. edulis</italic> f. <italic>edulis</italic> Sims, gulupa), sweet granadilla (<italic>P. ligularis</italic> Juss., granadilla), banana passion fruit (<italic>P. tripartita</italic> var. <italic>mollissima</italic> [Kunth], curuba), and stone granadilla (<italic>P. maliformis</italic> L., cholupa) (<xref ref-type="bibr" rid="B20">Fischer et&#xa0;al., 2021</xref>). As of 2024, passion fruit cultivation in Colombia covered approximately 32,430 hectares across 28 departments, yielding an estimated production of 449,775 tons (<xref ref-type="bibr" rid="B41">Ministerio de Agricultura y Desarrollo Rural (MADR), 2025</xref>).</p>
<p>
<italic>Passiflora maliformis</italic> is also a species of considerable agronomic interest. Based on morphological and genetic analyses, it is classified within the supersection <italic>Stipulata</italic>, section <italic>Granadillastrum</italic>, and series <italic>Tiliifolia</italic> (<xref ref-type="bibr" rid="B83">Yockteng and Nadot, 2004</xref>; <xref ref-type="bibr" rid="B62">Ramaiya et&#xa0;al., 2014</xref>). Native to the tropical regions of the Americas, this vigorous vine produces large, pendulous hermaphroditic flowers, which display high self-incompatibility (~95%), and fruits that mature within 50&#x2013;60 days (<xref ref-type="bibr" rid="B42">Molano-Avellaneda et&#xa0;al., 2020</xref>). Its phytochemical profile, characterized by a high content of total phenols and strong antioxidant activity, confers extracts with antioxidant, cytotoxic, and antimicrobial properties (<xref ref-type="bibr" rid="B67">Sabogal-Palma et&#xa0;al., 2016</xref>).</p>
<p>Another <italic>Passiflora</italic> species of major agronomic importance in Colombia is purple passion fruit (<italic>P. edulis</italic> f. <italic>edulis</italic>), currently ranked as the third most exported fruit. Its profitability and strong demand in European and Canadian markets have driven a steady expansion of its cultivation (<xref ref-type="bibr" rid="B33">L&#xf3;pez Plazas, 2020</xref>). This product is consumed fresh or incorporated into various culinary preparations due to its characteristic aroma and flavor. Its fruits are rich in carbohydrates, essential minerals (Fe, Cu, P, K, Mg), vitamins (riboflavin, niacin, vitamin C), and bioactive compounds with recognized nutraceutical and industrial applications (<xref ref-type="bibr" rid="B22">Fonseca et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B57">Pereira et&#xa0;al., 2023</xref>). Altogether, these characteristics consolidate purple passion fruit as a strategic crop for Colombia&#x2019;s agricultural sector and a benchmark for the development of other <italic>Passiflora</italic> species.</p>
<p>Despite their growing socioeconomic relevance, cultivated passionflower species are severely affected by soilborne pathogens, notably <italic>Fusarium oxysporum</italic> and <italic>F. solani</italic>, which cause vascular wilt and stem rot (<xref ref-type="bibr" rid="B21">Fischer and Rezende, 2008</xref>; <xref ref-type="bibr" rid="B27">Kiptui et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B45">Mukoye et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B10">Bernal-Moreno and Rodr&#xed;guez, 2023</xref>; <xref ref-type="bibr" rid="B78">Wang et&#xa0;al., 2023</xref>). Under severe infections, these diseases may result in total crop losses (100%) (<xref ref-type="bibr" rid="B74">Torres et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B68">Salazar-Gonzalez et&#xa0;al., 2022</xref>). Given their persistence in soil and aggressive colonization strategy, these pathogens represent major constraints for purple passion fruit cultivation worldwide, raising significant concerns due to their economic impact (<xref ref-type="bibr" rid="B21">Fischer and Rezende, 2008</xref>; <xref ref-type="bibr" rid="B81">Yadeta and Thomma, 2013</xref>; <xref ref-type="bibr" rid="B2">Aiello et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B26">Kashyap et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B24">Gon&#xe7;alves Barros Silva, 2023</xref>).</p>
<p>The infection cycle of <italic>Fusarium</italic> spp. comprises root adhesion, cell wall degradation through enzymatic activity, and xylem colonization by microconidia. These events trigger systemic dissemination that culminates in vascular blockage, physiological water stress, and host death (<xref ref-type="bibr" rid="B18">Ekwomadu and Mwanza, 2023</xref>). <italic>Fusarium</italic> wilt and stem rot progress acropetally and manifest through early chlorosis, wilting desiccation of aerial tissues, defoliation, vascular discoloration, and plant death (<xref ref-type="bibr" rid="B51">Ortiz et&#xa0;al., 2014</xref>). Stem rot is further characterized by necrosis at the root collar and development of perithecia, although its diagnosis is often complicated by overlapping symptoms with <italic>Fusarium</italic> wilt (<xref ref-type="bibr" rid="B1">Agrios, 2005</xref>; <xref ref-type="bibr" rid="B60">Ploetz, 2005</xref>).</p>
<p>Managing vascular wilt pathogens is particularly challenging due to their long persistence in soil and their capacity to infect plants at any developmental stage. Conventional control methods, including chemical, physical, and cultural practices, are often ineffective and economically unsustainable (<xref ref-type="bibr" rid="B2">Aiello et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B7">Bahadur, 2022</xref>; <xref ref-type="bibr" rid="B18">Ekwomadu and Mwanza, 2023</xref>). Consequently, increasing emphasis has been placed on genetic strategies such as breeding and grafting with resistant genotypes, which provide sustainable alternatives for the management of <italic>Fusarium</italic> infections (<xref ref-type="bibr" rid="B53">Panth et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B14">Carvalho et&#xa0;al., 2021</xref>). Grafting, in particular, has been extensively applied in agriculture to enhance crop tolerance to both biotic and abiotic stresses (<xref ref-type="bibr" rid="B25">Hurtado-Salazar et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B80">Williams et&#xa0;al., 2021</xref>).</p>
<p>While both grafting and breeding provide valuable opportunities for disease management, their application has not been fully extended to all commercial crops, partly due to genetic variability in the response of passion fruit species to pathogens such as <italic>Fusarium</italic> (<xref ref-type="bibr" rid="B19">Ferreira et&#xa0;al., 2023</xref>). In this context, studies conducted in producing countries such as Brazil and Colombia, have evaluated the resistance to <italic>F. oxysporum</italic> and <italic>F. solani</italic> of some passion fruit species grown in greenhouses or nurseries (<xref ref-type="bibr" rid="B32">Londo&#xf1;o, 2012</xref>; <xref ref-type="bibr" rid="B72">Silva Flores et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B51">Ortiz et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B23">Forero et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B54">Papadaki et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B63">Rios Ribeiro et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B55">Pati&#xf1;o Pacheco, 2020</xref>; <xref ref-type="bibr" rid="B39">Miguel-Wruck et&#xa0;al., 2021</xref>).</p>
<p>On the other hand, although <italic>P. maliformis</italic> has been proven to exhibit high compatibility and potential as a rootstock for purple passion fruit (<italic>P. edulis f. edulis</italic>), systematic evaluations of its resistance to <italic>Fusarium</italic> spp., particularly under controlled conditions, remain scarce (<xref ref-type="bibr" rid="B11">Betancourt and Mu&#xf1;&#xf3;z, 2012</xref>; <xref ref-type="bibr" rid="B39">Miguel-Wruck et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B66">Roncatto et&#xa0;al., 2021</xref>). Therefore, the present study aimed to elucidate the resistance mechanisms of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> against <italic>F. oxysporum</italic> (Fusarium wilt) and <italic>F. solani</italic> (stem rot), with emphasis on histopathological traits. The results provide a foundation for enhancing disease resistance and productivity in passionflower crops, supporting the validation of this wild genotype as a resistant rootstock and a valuable candidate for breeding programs.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<label>2</label>
<title>Material and methods</title>
<p>This study was carried out at the BIOPLASMA-UPTC Plant Tissue Culture Laboratory in four main phases: (I) <italic>ex vitro</italic> and <italic>in vitro</italic> propagation of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> seedlings, (II) obtaining pathogenic isolates of <italic>F. oxysporum</italic> and <italic>F. solani</italic> complexes, (III) inoculation of plant material and response evaluation, and (IV) histological analysis.</p>
<sec id="s2_1">
<label>2.1</label>
<title>Plant and fungal material</title>
<p>Healthy seeds of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> from the department of Boyac&#xe1; were selected as source material. Such seeds were sown under <italic>ex vitro</italic> in peat and maintained under greenhouse conditions (SE) or germinated <italic>in vitro</italic> by zygotic embryo culture (SI) to obtain seedlings. When the SE seedlings were 3&#x2013;4 cm tall, with development of cotyledonary leaves and a second pair of leaves, they were potted in 0.5 kg bags with a sterile substrate mixture composed of soil:capote:sand in a 3:2:1 ratio.</p>
<p>On the other hand, the SI seedlings were obtained with the methodology reported by <xref ref-type="bibr" rid="B12">Boh&#xf3;rquez et al., (2016)</xref>. Thus, <italic>in vitro</italic> cultures were established from sexual embryos, to obtain 3&#x2013;4 cm tall seedlings with developing cotyledonary leaves and a second pair of leaves that were gradually acclimatized in a greenhouse for about 20 days.</p>
<p>Meanwhile, the <italic>Fusarium oxysporum</italic> isolate used in this study was obtained from plants of <italic>Passiflora edulis</italic> Sims f. <italic>edulis</italic> (Gulupa) crops affected by <italic>Fusarium</italic> wilt, established in the municipality of Sutamarch&#xe1;n (Pedregal Bajo; altitude 2.200 m), department of Boyac&#xe1;, Colombia. Isolated colonies were morphologically characterized from cultures grown on PDA (potato dextrose agar). Proliferated colonies were examined under a stereomicroscope. In addition, microscopic structures were observed on fresh samples stained with lactophenol cotton blue with an optical microscope (Nikon eclipse T2000). Qualitative descriptors, as proposed by <xref ref-type="bibr" rid="B28">Leslie and Summerell (2006)</xref> and <xref ref-type="bibr" rid="B70">Sa&#xf1;udo (2012)</xref> were used.</p>
<p>Molecular identification was performed by Corpogen Corporation by amplification of the ITS region using the universal primers ITS 4 and 5 (<xref ref-type="bibr" rid="B79">White et&#xa0;al., 1990</xref>). The sequence (Accession: PRJNA1216561) was analyzed with the NCBI database using BLAST software. The corresponding fungal isolate was assigned to the species name after comparison with representative sequences available in GenBank and UNITE. Molecular procedures allowed us to obtain fragments of 571 bp as a result of the amplification of PCR products of ITS regions. The taxonomic analysis of this sequence in relation to the NCBI and UNITE nr/nt database indicated a high similarity with <italic>Fusarium oxysporum</italic> (99% identity in 100% of its length).</p>
<p>On the other hand, the isolate of <italic>F. solani</italic> used here (MV184), was previously characterized and identified by <xref ref-type="bibr" rid="B55">Pati&#xf1;o Pacheco (2020)</xref> as a causal agent of <italic>Fusarium wilt</italic> in sweet granadilla and also recognized as highly pathogenic for 18 accessions of <italic>Passiflora</italic>.</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Pathogenicity test</title>
<p>Two <italic>Fusarium</italic> isolates pathogenic to passion fruits were selected for this study. <italic>In vivo</italic> pathogenicity was tested using two inoculation methods: 1) root immersion and 2) soil infestation with rice grains. The conidial suspension was prepared following the methodology by <xref ref-type="bibr" rid="B46">Namiki et&#xa0;al. (1994)</xref> with a concentration of 1x10<sup>6</sup> con/ml. Seedlings were removed from the substrate, and their roots were washed with sterile distilled water. For inoculation, the root system of uniformly appearing plants was immersed in the conidial suspension for 5 minutes; the solution was agitated before and during the procedure. Then, seedlings were transplanted into a sterile substrate composed of soil, rice husk, and peat in a 3:1:1 ratio.</p>
<p>For soil infestation with the rice grain method, Chaff-Grain medium was prepared following the methodology described by <xref ref-type="bibr" rid="B28">Leslie and Summerell (2006)</xref>. This suspension was homogenized in 1 kg of substrate as above and the seedlings were sown in the inoculated substrate.</p>
<p>In the pathogenicity assays, several SE and SI seedlings equivalent to those used in each inoculation treatment were included as controls. The roots of these control seedlings were initially immersed in sterile distilled water and then planted in the sterile substrate, following the same procedure described for the inoculated plants.</p>
<p>A completely randomized block design was used with three replications, and an equal number of seedlings was assigned to 10 treatments (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). Each experimental unit consisted of six seedlings per replicate. Disease progression was assessed by randomly sampling plants at 3-day intervals, starting from the date of transplanting to pots and continuing for 27 days.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Inoculation treatments on <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> germinated <italic>ex vitro</italic> (SE) and <italic>in vitro</italic> (SI), by liquid suspension (L) and infestation on solid substrate (S), with <italic>Fusarium oxysporum</italic> (Fo) and <italic>Fusarium solani</italic> (Fs).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Seedling</th>
<th valign="middle" align="center">Isolate</th>
<th valign="middle" align="center">Inoculation</th>
<th valign="middle" align="center">ID</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="5" align="center">SE</td>
<td valign="middle" align="center">
<italic>Fo</italic>
</td>
<td valign="middle" align="center">L</td>
<td valign="middle" align="center">T1-Fo-SE-L</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>Fo</italic>
</td>
<td valign="middle" align="center">S</td>
<td valign="middle" align="center">T2-Fo-SE-S</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>Fs</italic>
</td>
<td valign="middle" align="center">L</td>
<td valign="middle" align="center">T3-Fs-SE-L</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>Fs</italic>
</td>
<td valign="middle" align="center">S</td>
<td valign="middle" align="center">T4-Fs-SE-S</td>
</tr>
<tr>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">T5-C-SE</td>
</tr>
<tr>
<td valign="middle" rowspan="5" align="center">SI</td>
<td valign="middle" align="center">
<italic>Fo</italic>
</td>
<td valign="middle" align="center">L</td>
<td valign="middle" align="center">T6-Fo-SI-L</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>Fo</italic>
</td>
<td valign="middle" align="center">S</td>
<td valign="middle" align="center">T7-Fo-SI-S</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>Fs</italic>
</td>
<td valign="middle" align="center">L</td>
<td valign="middle" align="center">T8-Fs-SI-L</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>Fs</italic>
</td>
<td valign="middle" align="center">S</td>
<td valign="middle" align="center">T9-Fs-SI-S</td>
</tr>
<tr>
<td valign="middle" align="center">
<italic>-</italic>
</td>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">T10-C-SI</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Treatments T5-C-SE and T10-C-SI corresponded to controls; seedling root systems were submerged in sterile distilled water.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>Disease assessment.</title>
<p>The disease progression was assessed through qualitative and quantitative estimators, such as incidence, severity and mortality. <italic>Incubation period</italic> refers to time from inoculation to the expression of disease symptoms in the plants. <italic>Incidence of the disease</italic> was determined by formula: <italic>Incidence= (number of diseased individuals/total number of individuals) *100.</italic> Regarding <italic>disease severity</italic> was assessed using 0&#x2013;9 scale based on the presence of discoloration, chlorosis, leaf defoliation, the appearance of the collar and root system, and the percentage of plant area affected (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>), as follows: Grade 0 = no infection (0-10%), Grade 3 = 11-20%, Grade 5 = 21-50%, Grade 7 = 51-75%, Grade 9 = 76%- 100%, according to <xref ref-type="bibr" rid="B65">Rodriguez et&#xa0;al. (1999)</xref>. Seedlings exhibiting severity grades higher than 7 were removed from the pots to further examine the collar and root system.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Representative illustration of the progress of <italic>Fusarium wilt</italic> based on symptomatic progression and percentage of the plant affected. Scheme devised and recreated by the authors with images illustrated by Camila Reyes and Angie Carvajal.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g001.tif">
<alt-text content-type="machine-generated">Diagram depicting varying stages of plant health and disease severity. Grade 0 shows healthy plants with 0-10% symptoms. Grade 3 indicates slight chlorosis in lower leaves, 11-20%. Grade 5 shows wilting and purple discoloration on up to 50% of the stem, 21-50%. Grade 7 presents severe wilting and leaf collapse, 51-75%. Grade 9 illustrates necrotic stems and dead plants, 75-100%. A continuum at the bottom indicates disease progression from healthy to dead plants.</alt-text>
</graphic>
</fig>
<p>Moreover, disease intensity was quantified using the severity index, calculated according to the method proposed by <xref ref-type="bibr" rid="B75">Townsend and Heuberger (1943)</xref>. These values were then used to compute the area under the disease progression curve (AUDPC), which integrates disease development over time for comparison among treatments (<xref ref-type="bibr" rid="B34">L&#xf3;pez-Santiago et&#xa0;al., 2008</xref>). Additionally, <italic>plant mortality</italic> (expressed as a percentage of dead plants), was recorded from each treatment 27 days after inoculation.</p>
</sec>
<sec id="s2_4">
<label>2.4</label>
<title>Histological analysis</title>
<p>A comparative study of the infection process by both pathogens in the plant tissues was carried out using light microscopy to understand the histological changes/mechanisms associated with the response of <italic>P. maliformis</italic> var. <italic>pubescens</italic> to inoculation with <italic>F. oxysporum</italic> and <italic>F. solani</italic> species complexes. After monitoring, stems and roots were isolated from inoculated plants and SE and SI controls. Tissue samples were sectioned and processed according to the protocol described by <xref ref-type="bibr" rid="B51">Ortiz et al., (2014)</xref> with some modifications. The sections were isolated and fixed for 24 h in FAA. Subsequently, these were dehydrated in a series of ethanol isopropanol and acetone. The samples were embedded in paraffin, and histological sections (8-10 &#xb5;m) were obtained with a rotary microtome. Cross-sections were stained with Safranin-FastGreen and observed under a microscope LEICA DM750 binocular microscope.</p>
</sec>
<sec id="s2_5">
<label>2.5</label>
<title>Data analysis</title>
<p>Logistic regression analysis was selected as the primary method for data analysis, given the inclusion of multiple independent variables, which justified the use of a multivariate approach. Using a maximum likelihood estimator, the model identified the set of coefficients that maximized the probability of reproducing the observed data. Incidence and severity were coded as binary (&#x201c;no&#x201d; = 0, &#x201c;yes&#x201d; = 1) and ordinal (scale 0 to 9) variables, respectively, making probabilistic modeling appropriate. A binomial logistic regression model was applied for incidence, while a multinomial logistic regression model was used for severity.</p>
<p>Backward stepwise selection was employed to assess the significance of the factors: day, plant material, fungal species, inoculation technique, and their interactions. Model significance, main effects, and interactions were evaluated using the Chi-square test. Factor levels were compared through odds ratios and predicted probabilities. The AUDPC was analyzed using analysis of variance (ANOVA) to detect significant treatment effects. All statistical analyses were performed using SAS software (<xref ref-type="bibr" rid="B71">SAS Institute Inc, 2019</xref>).</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results</title>
<sec id="s3_1">
<label>3.1</label>
<title>Disease, incidence and severity</title>
<p>
<italic>Symptoms</italic> of <italic>Fusarium</italic> wilt and stem rot after inoculation included yellowing of lower leaves. Then, chlorosis spread through the plant, and the tissues progressively became necrotic and collapsed, ultimately dying. In other cases, symptoms were observable until plants collapsed without prior occurrence of discoloration and disease severity varied among the seedlings evaluated. The incubation period of <italic>F. solani</italic> and <italic>F. oxysporum</italic> was nine days in SI, and 15 days in SE, with both types of inoculation (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2A, B</bold>
</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Response of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> to <italic>F. oxysporum</italic> (right plots) and <italic>F. solani</italic> (left plots) inoculation during 27 dpi (days post inoculation). In terms of incidence <bold>(A, B)</bold>, the percentage of affected plants coincides with the size of the circles, the higher the value, the larger the size of the figure. Severity <bold>(C, D)</bold>, data set and follow-up to seedlings that integrated the sample and severity index <bold>(E, F)</bold>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g002.tif">
<alt-text content-type="machine-generated">Charts showing the incidence, severity, and severity index over time for Fusarium oxysporum and Fusarium solani. The x-axis represents days post-inoculation, while the y-axis shows percentage for incidence and numerical values for severity and index. Multiple treatments are differentiated by color. Seedlings are indicated by shape: circles for SE and triangles for SI.</alt-text>
</graphic>
</fig>
<p>The <italic>Fusarium</italic> species tested provoked visible symptoms on both SE and SI plants with both inoculation methods. The <italic>incidence</italic> of disease due to <italic>F. oxysporum</italic> after 27 dpi ranged from 0 to 16.67%, and the highest value in both SE and SI plants was recorded with liquid inoculum (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2A</bold>
</xref>). With <italic>F. solani</italic>, the percentage rates of infection at 27 dpi ranged between 16.67 and 50%, with the highest data for SI for both types of inoculation (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>).</p>
<p>In terms of <italic>severity</italic>, symptomatic and asymptomatic plants were identified at 27 dpi. Of the diseased plants 60% were slightly affected (grade 3) while the remaining 40% developed drastic symptoms (grade 9) (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2C, D</bold>
</xref>), with an F<italic>. solani</italic>: <italic>F. oxysporum</italic> ratio of 5:1 and 3:1 for each grade, respectively. Thus, in SI plants, there was a higher risk of developing the disease and with more severe symptoms under the action of <italic>F. solani</italic> (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2D</bold>
</xref>).</p>
<p>The analysis identified statistically significant differences in incidence and severity between fungal species and plant material (SE, SI) (p&lt;0.0001; <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Tables S1, S2</bold>
</xref>). In addition, the probability of finding healthy plants of SE and SI was higher than 50%. Likewise, the occurrence of <italic>Fusarium</italic> wilt with medium-high severity (5-9) was less than 10% for both cases (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S1</bold>
</xref>).</p>
<p>The <italic>severity index</italic> obtained was 2.5 on the scale with a maximum value of 9. In plants inoculated with <italic>F. oxysporum</italic> the index was less than or equal to 1.5, while with <italic>F. solani</italic> it was 2.5 (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2E, F</bold>
</xref>). In addition, the analysis identified statistically significant differences in severity index between fungal species and plant material (SE, SI) (p&lt;0.001; <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Tables S3, S4</bold>
</xref>).</p>
<p>The <italic>AUDPC</italic> obtained ranged from 0 for plants without symptoms to 32.75 for the most affected plants (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). The results were not statistically different between treatments (p=0,3263); <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S5</bold>
</xref>), this can be associated, with low fungal affectation at SE and SI. With respect to <italic>mortality</italic> it was determined that <italic>Fusarium</italic> wilt is not a limiting factor for the viability of <italic>P. maliformis</italic> var. <italic>pubescens.</italic> Only 6.67% of the inoculated plants died by 27 dpi, of which 5.25% and 1.75% corresponded to SE and SI, respectively. In general, the inoculated plants remained viable (93.33%).</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Fusarium wilt AUDPC, 27dpi of Passiflora maliformis var. pubescens with Fusarium oxysporum (Fo) and Fusarium solani (Fs).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Treatment</th>
<th valign="middle" align="center">
<italic>F. oxysporum</italic>
</th>
<th valign="middle" align="center">
<italic>F. solani</italic>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="center">T1-Fo-SE-L</td>
<td valign="middle" align="center">15.25</td>
<td valign="middle" align="center">-</td>
</tr>
<tr>
<td valign="middle" align="center">T2-Fo-SE-S</td>
<td valign="middle" align="center">6.75</td>
<td valign="middle" align="center">-</td>
</tr>
<tr>
<td valign="middle" align="center">T3-Fs-SE-L</td>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">0</td>
</tr>
<tr>
<td valign="middle" align="center">T4-Fs-SE-S</td>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">17.25</td>
</tr>
<tr>
<td valign="middle" align="center">T5-C-SE</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center">0</td>
</tr>
<tr>
<td valign="middle" align="center">T6-Fo-SI-L</td>
<td valign="middle" align="center">9.75</td>
<td valign="middle" align="center">-</td>
</tr>
<tr>
<td valign="middle" align="center">T7-Fo-SI-S</td>
<td valign="middle" align="center">29.25</td>
<td valign="middle" align="center">-</td>
</tr>
<tr>
<td valign="middle" align="center">T8-Fs-SI-L</td>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">0</td>
</tr>
<tr>
<td valign="middle" align="center">T9-Fs-SI-S</td>
<td valign="middle" align="center">-</td>
<td valign="middle" align="center">32.75</td>
</tr>
<tr>
<td valign="middle" align="center">T10-C-SI</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center">0</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Histological analysis of <italic>Fusarium</italic> infection in <italic>P. maliformis</italic> var <italic>pubescens</italic>
</title>
<p>In transverse microsections of stem and root of non-inoculated plants, monostratified epidermis, collenchyma, parenchyma, vascular cells, pith and sporadically druses were observed. Vascular cells were arranged in eustella, that is, distributed in a circle and separated by the interphasicular cambium. These tissues and characteristics were also apparent in plants inoculated with <italic>F. oxysporum</italic> and <italic>F. solani</italic>, with some changes (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Photomicrographs of cross-cutting sections of stems and roots of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> control <bold>(A, B)</bold> and under inoculation with <italic>Fusarium oxysporum</italic> <bold>(C, D)</bold> and <italic>Fusarium solani</italic> <bold>(E, F)</bold>. co, cortex; ep, epidermis; pa, parenchyma; ph, phloem; pi, pith; pr, pith radial and vc, vascular cells. Scale bars, 100 &#xb5;m. Image created by the authors. The coloration in each image reflects the affinity of the tissues to the Safranin-FastGreen staining method.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g003.tif">
<alt-text content-type="machine-generated">Cross-sections of plant stem and root tissues under three conditions: control, Fusarium oxysporum, and Fusarium solani. Each condition shows labeled features such as cortex (co), pith (pi), vascular cambium (vc), epidermis (ep), phloem (ph), and parenchyma (pa). The sections illustrate structural differences under various fungal infections.</alt-text>
</graphic>
</fig>
<p>The anatomical response of the plant to contact with the pathogen was consistent with the degree of severity of the disease. In inoculated plants with mild to medium symptomatology (grades 0 - 5), xylem cells with dense secretions inside and with thickened and lignified cell walls were observed in the stem, showing histological changes compared to control individuals (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). In the root, these mechanisms were more frequent and were complemented by secretions in the intercellular spaces and and what appeared to be tyloses (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>). On the other hand, in severely affected plants (grades 7 and 9), tissues gradually collapsed until they suffered complete degradation, while the abundance of fungal spores increased (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S2</bold>
</xref>). These cellular changes coincided with the appearance of noticeable symptoms of infection leading to plant death.</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Photomicrographs of cross-cutting sections of stems and roots of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> control <bold>(A, B)</bold> and under inoculation with <italic>Fusarium oxysporum</italic> <bold>(C, D)</bold> and <italic>Fusarium solani</italic> <bold>(E, F)</bold>. co, cortex; dc, druse crystal; pi, pith; and vc, vascular cells. Scale bars, 25 &#xb5;m. Image created by the authors. In inoculated tissues, inside and between the vascular cells there are red-violet dense substances (undetermined), marked with asterisks; absent in the micro-preparations of control plants.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g004.tif">
<alt-text content-type="machine-generated">Microscopic analysis of plant stem and root sections under control conditions and infected by F. oxysporum and F. solani. Each section displays vascular structures including vascular cambium (vc), cortex (co), and pith (pi). Infected samples show alterations, indicated by asterisks, with changes in cell color and structure, particularly in the roots. Insets magnify vascular details, highlighting differences in cell wall integrity and arrangement. Scale bars appear for reference.</alt-text>
</graphic>
</fig>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Tissue defense responses of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> inoculated with <italic>Fusarium oxysporum</italic> and <italic>Fusarium solani</italic> denoted by the occurrence of dense substances (undetermined) <bold>(A, B, D)</bold>, occluding material <bold>(A, E)</bold> and tyloses <bold>(C)</bold>. om, occluding material; lm, lumen; bxl, blocked xylem lumen and ty, tyloses. Scale bars, 25 &#xb5;m. Image created by the authors. 27 dpi showing accumulation of substances in the intercellular space (white asterisk).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g005.tif">
<alt-text content-type="machine-generated">Microscopic images of plant tissue sections labeled with annotations. The sections display a network of cells and structures such as bxl, om, lm, and ty, with arrows and asterisks indicating specific features. The images show various cellular arrangements, colors, and textures, including red-stained areas, likely highlighting different tissues or reactions within the plant sections. Scale bars are present in each image for reference.</alt-text>
</graphic>
</fig>
<p>Microscopy allowed to identify and illustrate the main stages of the <italic>Fusarium</italic> wilt disease cycle (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>). Thus, it was possible to confirm that the germination of chlamydospores, the development of hyphae that entered the root epidermis and subsequently colonized the cortex constitute the first stages of the disease. Upon colonization, the plant develops response mechanisms to prevent the spread of the fungus in the tissues. However, when fungal infection overcomes these barriers, internal and external tissue collapse occurs in the host, followed by the formation of pathogen reproductive spores (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7</bold>
</xref>). Therefore, the results of this study allowed us to relate the activation of defense mechanisms with a lower degree of disease severity.</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Disease cycle of <italic>Fusarium wilt</italic> in <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> based on the study conducted; idea adapted from Jangir et&#xa0;al. (2021). The illustration represents the main stages of interaction between the pathogen and the host (plant).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g006.tif">
<alt-text content-type="machine-generated">Illustration depicting the progression of plant tissue collapse due to antifungal compounds. It shows different stages of infection from grades zero to nine, including germinating chlamydospores, colonization of the cortex, collapse of xylem cells, and tissue collapse. The final stage has the plant dead with spores formed. Each stage is paired with a microscopy image, highlighting cellular changes. Small diagrams at the bottom illustrate types of spores: macro, microconidia, monophialides, and chlamydospores.</alt-text>
</graphic>
</fig>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>Schematic recreation of defense responses of <italic>Passiflora maliformis</italic> var. <italic>pubescens</italic> to <italic>Fusarium wilt.</italic> Longitudinal and cross-sectional view of the histological response of the host to pathogenic action. co, cortex; ep, epidermis; pi, pith; om, occluding material; sic, substances in the intercellular space; ty, tyloses and vc, vascular cells; v, vessel.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-16-1635702-g007.tif">
<alt-text content-type="machine-generated">Diagram illustrating histology visualization in plant cells. The top section shows plant structure with labeled components: ep (epidermis), co (cortex), pi (pith), and vc (vascular cells). The middle section depicts control vascular cells, highlighting v (vacuole), vw (vascular wall), and pc (parenchyma cells) in cross and longitudinal views. The bottom section illustrates fungal response, showing structural changes such as om (outer membrane), hy (hyphae), ty (tyloses), and c (cellular response) with the same views.</alt-text>
</graphic>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<label>4</label>
<title>Discussion</title>
<p>Research related to diseases affecting crops is essential to guide comprehensive prevention, management and control strategies (<xref ref-type="bibr" rid="B61">Rahut et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B84">Zhang et&#xa0;al., 2023</xref>). Also, being relevant for the production of safe and healthy food, it can contribute to food security (<xref ref-type="bibr" rid="B29">Li et&#xa0;al., 2023</xref>). In the <italic>Passiflora</italic> production sector, it is a priority to have cultivars that are resistant to <italic>Fusarium</italic> wilt and meet nutritional, productive and industrial demands (<xref ref-type="bibr" rid="B3">Amorim-Pereira et&#xa0;al., 2019</xref>). However, our current knowledge of the relationship between <italic>F. oxysporum</italic> and <italic>F. solani</italic> and wild genotypes of <italic>Passiflora</italic> is still incomplete. This study contributes to filling that gap, through the evaluation of the response of a wild genotype to the action of <italic>Fusarium</italic> wilt and stem rot causal agents (<xref ref-type="bibr" rid="B45">Mukoye et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B47">Nassimbwa et&#xa0;al., 2022</xref>). This analysis included aspects frequently reported to determine the response of <italic>Passiflora</italic> species/accessions to the action of <italic>Fusarium</italic> spp., in addition to a histopathological description.</p>
<p>
<italic>F. oxysporum</italic> affected less than 17% of the seedlings, with a low symptomatic progression, a severity index of up to 0.5, and an average AUDPC of 6.25. Although inoculation with <italic>F. solani</italic> led to an incidence &#x2264;50%, symptomatology was mild, the severity index was less than 1.75 and disease progress (AUDPC) had a mean value of 21.5. In addition, mortality after 27 dpi in inoculated plants was less than 7%, with similar records for <italic>F. oxysporum</italic> and <italic>F. solani</italic>. These results contrast with those reported for species susceptible to <italic>Fusarium</italic> wilt and stem rot such as <italic>Passiflora edulis</italic> f. <italic>flavicarpa</italic> Degener, <italic>P. edulis</italic> f. <italic>edulis</italic> Sims and <italic>P. ligularis</italic> Juss, where incidence generally ranges between 40-100% (<xref ref-type="bibr" rid="B23">Forero et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B38">Melo et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B64">Rocha et&#xa0;al., 2021</xref>) with medium-high affectation (<xref ref-type="bibr" rid="B52">Ortiz and Hoyos-Carvajal, 2016</xref>) and a severity index ranging from 5-7.5 (on a scale of 1-10) (<xref ref-type="bibr" rid="B30">Lima et&#xa0;al., 2019</xref>). Likewise, mortality of up to 70% and survival of less than 30% have been reported (<xref ref-type="bibr" rid="B59">Pires et&#xa0;al., 2022</xref>).</p>
<p>On the other hand, in the case of resistant accessions, previous studies have reported incidences between 0 and 50% (<xref ref-type="bibr" rid="B32">Londo&#xf1;o, 2012</xref>; <xref ref-type="bibr" rid="B56">Pati&#xf1;o-Pacheco and P&#xe9;rez-Cardona, 2021</xref>), mortality rates below 50% (<xref ref-type="bibr" rid="B3">Amorim-Pereira et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B38">Melo et&#xa0;al., 2020</xref>) survival rates of 67-100% (<xref ref-type="bibr" rid="B14">Carvalho et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B49">Oliveira et&#xa0;al., 2022</xref>), and progression of severity (AUDPC) close or equal to zero (<xref ref-type="bibr" rid="B58">P&#xe9;rez and Forbes, 2008</xref>); which would indicate a low level of infection in the genotype evaluated in this study.</p>
<p>The search for new sources of resistance against <italic>Fusarium</italic> wilt and stem rot requires efficient detection methods that provide information on physical and chemical response mechanisms (<xref ref-type="bibr" rid="B69">Sampaio et&#xa0;al., 2020</xref>). Upon an attack of pathogenic microorganisms plants activate complex immune networks to prevent or minimize colonization of their internal structures and deprivation of nutrients (<xref ref-type="bibr" rid="B35">Margaritopoulou et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B17">Duarte-Alvarado et&#xa0;al., 2021</xref>). In vascular wilt, the formation of structural barriers in and around the vascular bundles is one of the most important components of defense against the disease according to <xref ref-type="bibr" rid="B26">Kashyap et&#xa0;al. (2021)</xref>.</p>
<p>Internal anatomical analysis revealed intercellular and intracellular secretion of dense substances, as well as possible lignification of cell walls and tyloses formation, as potential response mechanisms of <italic>P. maliformis</italic> var. <italic>pubescens</italic> to infection by isolates of the <italic>F. oxysporum</italic> and <italic>F. solani</italic> complexes. These reactions play a crucial role in limiting the spread of the pathogen, since physical structures neutralize or reduce further spread and chemicals can lead to the death or inhibition of pathogen growth (<xref ref-type="bibr" rid="B16">De Micco et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B15">Chakraborty et&#xa0;al., 2022</xref>).</p>
<p>In the initial steps of the response to <italic>Fusarium</italic> wilt, gels are formed within the xylem that are mainly composed of polysaccharides and phenolic compounds exuded from the parenchymal cells adjacent to the infection point. Once these compounds are fused to the cell wall, oxidation and polymerization reactions occur to form a durable barrier at the interface of the infected and healthy tissues (<xref ref-type="bibr" rid="B4">Ardila et&#xa0;al., 2014</xref>). Gels and dense substances fix conidia on vascular elements and localize the pathogen when <italic>F. oxysporum</italic> infection occurs (<xref ref-type="bibr" rid="B44">Muche and Yemata, 2022</xref>).</p>
<p>Other common barrier mechanisms against the disease are cell wall strengthening due to lignin deposition and the synthesis and accumulation of callose and phenolic compounds in inter- or intracellular spaces that block <italic>Fusarium</italic> progression in the host (<xref ref-type="bibr" rid="B69">Sampaio et&#xa0;al., 2020</xref>). Phenols have antifungal capacity by affecting the cell permeability of microorganisms, causing structural and functional changes in enzymes and membrane proteins, leading to alterations in the pH gradient and in the ATP production and conservation system (<xref ref-type="bibr" rid="B13">Carmona et&#xa0;al., 2020</xref>).</p>
<p>The results of this study suggested a high response capacity of the genotype since the defense mechanisms limited the pathogenic action of <italic>Fusarium</italic> spp. and low internal and external tissue damage was observed. Overall, both inoculated and non-inoculated SE and SI seedlings exhibited comparable shoot and root growth and development, which may indicate that the defense mechanisms of the genotype were effective in maintaining normal physiological performance. In this sense, the use of <italic>in vitro</italic> culture allowed the rapid and large-scale production of plant material, while providing a platform to evaluate resistance traits under controlled conditions. This dual functionality reinforces its potential application in breeding programs and integrated disease management strategies (<xref ref-type="bibr" rid="B9">Bernal- Moreno et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B10">Bernal-Moreno and Rodr&#xed;guez, 2023</xref>). Therefore, these results are especially relevant, as this wild genotype and its genetic background may serve as a strategic resource to address key biotechnological and agronomic challenges currently faced by promising <italic>Passiflora</italic> species.</p>
<p>Given the severe limitations caused by <italic>Fusarium wilt</italic> and stem rot in passion fruits agricultural systems, management of these diseases often relies on synthetic fungicides (<xref ref-type="bibr" rid="B31">Liu et&#xa0;al., 2025</xref>). Such as benzimidazoles (e.g., carbendazim), triazoles (e.g., tebuconazole) and strobilurins (e.g., azoxystrobin), which alter fungal membrane integrity or interfere with mitochondrial respiration. However, their continued use has raised increasing concerns about high economic costs, limited systemic mobility, persistence in the environment, risks to human health, and the emergence of resistant pathogen populations (<xref ref-type="bibr" rid="B40">Mikaberidze et&#xa0;al., 2014</xref>).</p>
<p>Ecological alternatives for the biorational control of <italic>F. oxysporum</italic> and <italic>F. solani</italic> include fungal and bacterial antagonists such as <italic>Trichoderma harzianum, T. asperellum, T. virens, Bacillus subtilis, B. amyloliquefaciens, Pseudomonas fluorescens, P. putida, and P. protegens.</italic> These microorganisms have demonstrated inhibition rates of up to 94% <italic>in vitro</italic> and, in some cases, in the field, through mechanisms that include mycoparasitism, the production of hydrolytic enzymes (e.g., chitinase and &#x3b2;-1,3-glucanase), the emission of volatile organic compounds, and the induction of systemic resistance in host plants (<xref ref-type="bibr" rid="B76">Verma et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B50">Ongena and Jacques, 2008</xref>; <xref ref-type="bibr" rid="B8">Ben Khedher et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B37">Mehmood et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B82">Yao et&#xa0;al., 2023</xref>). However, the effectiveness of these strategies in the field remains variable, largely influenced by factors such as interactions with native soil microbiota, climate variability, and the limited persistence of inoculants in the rhizosphere (<xref ref-type="bibr" rid="B5">Awu et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B77">Wang et&#xa0;al., 2024</xref>).</p>
<p>In this context, the use of resistant rootstocks emerges as a complementary and sustainable solution. Resistant genotypes do not require repeated applications, do not generate toxic residues, and are less susceptible to environmental fluctuations (<xref ref-type="bibr" rid="B6">Ayala-Do&#xf1;as et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B73">Suansia and Chandra Samal, 2021</xref>). Therefore, the identification of <italic>Passiflora</italic> rootstocks resistant to <italic>Fusarium</italic> wilt and stem rot represents a significant contribution to Colombia, one of the world&#x2019;s leading producers and exporters. This strategy offers a low environmental impact alternative that can improve the productivity of commercial species, reduce the incidence and severity of <italic>Fusarium</italic>-related diseases, and promote adaptability in various growing conditions.</p>
</sec>
</body>
<back>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>.</p>
</sec>
<sec id="s6" sec-type="author-contributions">
<title>Author contributions</title>
<p>DG-T: Investigation, Formal analysis, Resources, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing, Funding acquisition, Validation, Data curation, Visualization, Conceptualization, Methodology. MB-Q: Writing &#x2013; original draft, Investigation, Formal analysis, Funding acquisition, Validation, Writing &#x2013; review &amp; editing, Conceptualization, Data curation, Methodology. DA-M: Writing &#x2013; original draft, Funding acquisition, Validation, Writing &#x2013; review &amp; editing. ZO-P: Funding acquisition, Writing &#x2013; review &amp; editing, Writing &#x2013; original draft, Validation.</p>
</sec>
<sec id="s7" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research and/or publication of this article. This research was funded by the Ministry of Science Technology and Innovation of Colombia and the Boyac&#xe1; Government, through the &#x201c;Convocation 865 of 2019 for the closure of gaps in the agricultural sector Boyac&#xe1;&#x201d;.</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>The authors thank the BIOPLASMA-UPTC research group and exalt the contribution of Dr. Jos&#xe9; Constantino Pacheco Maldonado who also conceptualized and designed the research. Additionally, the authors would like to thank Johan Sebastian Urquijo Ruiz, Lorena Reyes and Miguel &#xc1;ngel C&#xe1;ceres Hern&#xe1;ndez for the data analysis, and to the researcher Sergio Ochatt for the grammatical adjustment of the English and his scientific review at article.</p>
</ack>
<sec id="s8" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s9" sec-type="ai-statement">
<title>Generative AI statement</title>
<p>The author(s) declare that no Generative AI was used in the creation of this manuscript.</p>
<p>Any alternative text (alt text) provided alongside figures in this article has been generated by Frontiers with the support of artificial intelligence and reasonable efforts have been made to ensure accuracy, including review by the authors wherever possible. If you identify any issues, please contact us.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fpls.2025.1635702/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fpls.2025.1635702/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
</sec>
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