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<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2024.1487106</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Stability and adaptability of grain yield in quinoa genotypes in four locations of Iran</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Jokarfard</surname>
<given-names>Vahid</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Rabiei</surname>
<given-names>Babak</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
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<contrib contrib-type="author">
<name>
<surname>Laki</surname>
<given-names>Ebrahim Souri</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<contrib contrib-type="author">
<name>
<surname>B&#xf6;rner</surname>
<given-names>Andreas</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<aff id="aff1">
<sup>1</sup>
<institution>Department of Plant Production and Genetic Engineering, Faculty of Agricultural Sciences, University of Guilan</institution>, <addr-line>Rasht</addr-line>, <country>Iran</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Gene Bank, Institute of Plant Genetics and Crop Plant Research</institution>, <addr-line>Gatersleben</addr-line>, <country>Germany</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Leonardo Velasco, Spanish National Research Council (CSIC), Spain</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Lenie Quiatchon-Baeza, University of the Philippines Los Ba&#xf1;os, Philippines</p>
<p>Juan Pablo Rodriguez, Julius K&#xfc;hn-Institut - Braunschweig, Germany</p>
<p>Didier Bazile, Centre de Coop&#xe9;ration Internationale en Recherche Agronomique pour le D&#xe9;veloppement (CIRAD), France</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Babak Rabiei, <email xlink:href="mailto:rabiei@guilan.ac.ir">rabiei@guilan.ac.ir</email>
</p>
</fn>
<fn fn-type="other" id="fn003">
<p>&#x2020;ORCID: Vahid Jokarfard, <uri xlink:href="https://orcid.org/0000-0002-5284-7970">orcid.org/0000-0002-5284-7970</uri>; Babak Rabiei, <uri xlink:href="https://orcid.org/0000-0001-5432-4498">orcid.org/0000-0001-5432-4498</uri>; Ebrahim Souri Laki, <uri xlink:href="https://orcid.org/0000-0003-1866-262X">orcid.org/0000-0003-1866-262X</uri>; Andreas B&#xf6;rner, <uri xlink:href="https://orcid.org/0000-0003-3301-9026">orcid.org/0000-0003-3301-9026</uri>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>29</day>
<month>11</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>15</volume>
<elocation-id>1487106</elocation-id>
<history>
<date date-type="received">
<day>27</day>
<month>08</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>13</day>
<month>11</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 Jokarfard, Rabiei, Laki and B&#xf6;rner</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Jokarfard, Rabiei, Laki and B&#xf6;rner</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>The genotype &#xd7; environment interaction is one of the effective factors in identifying and introducing cultivars with stable grain yield in different environments. There are many statistical methods for estimating genotype &#xd7; environment interaction, among which AMMI and GGE-biplot analyses provide better and more interpretable results. The objective of this study was to assess the genotype &#xd7; environment interaction, as well as the adaptability and stability of 40 quinoa genotypes. The experiment was carried out in a randomized complete block design with three replications in eight environments (four locations of Iran and two years). The AMMI analysis of variance showed that the main effects of genotype and environment, as well as the interaction effect of genotype &#xd7; environment were significant on grain yield. Separation of genotype &#xd7; environment interaction based on the principal component method showed that the first six principal components were significant and accounted for 47.6%, 22.5%, 9%, 7%, 6% and 4.3% of the genotype &#xd7; environment interaction variance, respectively. Based on the AMMI model, genotypes G16, G19, G35, G30, G39, G24, and G18 were identified as high-yielding and stable genotypes with high general adaptability. In contrast, genotypes G36, G27, G38, G9, G28, G29, G23, G34, G13, and G12 were the most unstable genotypes in the studied environments. In GGE-biplot analysis, two mega-environments were identified, and genotypes G16, G19, G25, and G17 were also identified as high-yielding and stable genotypes for these environments. Also, based on the biplot diagram of the ideal genotype, genotypes G16, G19, G17, and G35 were the nearest genotypes to the ideal genotype. In total, the results of various analyses showed that the three genotypes G16 and G19 were the superior genotypes of this experiment in terms of grain yield and stability. These genotypes can be introduced as high-yielding and stable genotypes to the climatic conditions of the studied areas.</p>
</abstract>
<kwd-group>
<kwd>grain yield</kwd>
<kwd>ideal genotype</kwd>
<kwd>mega-environment</kwd>
<kwd>genotype &#xd7; environment interaction</kwd>
<kwd>multivariate methods</kwd>
</kwd-group>
<contract-sponsor id="cn001">University of Guilan<named-content content-type="fundref-id">10.13039/100009038</named-content>
</contract-sponsor>
<counts>
<fig-count count="6"/>
<table-count count="6"/>
<equation-count count="5"/>
<ref-count count="91"/>
<page-count count="16"/>
<word-count count="8383"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Plant Breeding</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>Quinoa (<italic>Chenopodium quinoa</italic> Willd.) is a crop plant from the <italic>Amaranthaceae</italic> family. The origin of this crop is the Andes regions in Bolivia, Chile and Peru (<xref ref-type="bibr" rid="B75">Stanschewski et&#xa0;al., 2021</xref>). Quinoa is a self-pollinated plant, but some cultivars may show cross-pollination of about 4-20% (<xref ref-type="bibr" rid="B15">Anchico-Jojoa et&#xa0;al., 2023</xref>). Quinoa can grow in hard and stressful conditions such as salinity and drought stresses (<xref ref-type="bibr" rid="B14">Anchico et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B56">Manjarres-Hern&#xe1;ndez et&#xa0;al., 2021</xref>). The grain yield of quinoa cultivars varies between 2.2-9.8 tons per hectare (<xref ref-type="bibr" rid="B81">V&#xe1;squez et&#xa0;al., 2024</xref>). Different cultivars have different stem diameter, plant height, and grain length and diameter (<xref ref-type="bibr" rid="B56">Manjarres-Hern&#xe1;ndez et&#xa0;al., 2021</xref>). The growth and development of quinoa is strongly influenced by day length and photoperiod, so that its growth period in different cultivars and environmental conditions is approximately 90-240 days (<xref ref-type="bibr" rid="B17">Apaza et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B40">Gonz&#xe1;lez et&#xa0;al., 2015</xref>).</p>
<p>The main product of quinoa is its grain, which is called vegetable caviar because of its high nutritional value (<xref ref-type="bibr" rid="B60">Ng and Wang, 2021</xref>). Quinoa grains have a lower sodium content but higher levels of calcium, magnesium, potassium, iron, manganese, and zinc compared to common cereals such as wheat, barley, and maize (<xref ref-type="bibr" rid="B73">Singh, 2019</xref>; <xref ref-type="bibr" rid="B18">Aya&#x15f;an, 2020</xref>; <xref ref-type="bibr" rid="B80">Thiam et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B2">Abdelshafy et&#xa0;al., 2024</xref>). Quinoa contains 9.1-15.7 grams of protein, 4-7.6 grams of fat, and 8.8-14.1 grams of fiber per 100 grams of fresh weight (<xref ref-type="bibr" rid="B62">Nowak et&#xa0;al., 2016</xref>). In addition to quinoa grains, young quinoa leaves can be used as a fresh and cooked vegetable (<xref ref-type="bibr" rid="B65">Pathan et&#xa0;al., 2019</xref>). Therefore, due to the nutritional value and high production potential of quinoa, attention to this crop plant has increased worldwide to sustainably replace the nutrition of the growing world population (<xref ref-type="bibr" rid="B39">G&#xf3;mez et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B58">Mohamed Ahmed et&#xa0;al., 2021</xref>).</p>
<p>Climate changes in the world along with drying and salinization of the soils have caused many problems such as the loss of large parts of suitable agricultural soils and, finally, the migration of farmers and villagers to the cities. Quinoa is a very valuable crop plant in terms of tolerance to many environmental stresses, including drought and salinity. It can be cultivated in hard conditions and may be able to solve a significant part of these problems. Since different quinoa varieties have a very different range of tolerance, from sensitive to resistance to environmental stresses, it is necessary to investigate their adaptability and stability under different environmental conditions and to identify and introduce compatible and stable varieties to each environment (<xref ref-type="bibr" rid="B67">Ruiz et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B21">Bazile et&#xa0;al., 2015</xref>).</p>
<p>Genotype &#xd7; environment interaction is of particular importance for plant breeding researchers and one of the complex issues of breeding programs to identify high-yielding and stable genotypes (<xref ref-type="bibr" rid="B29">Dessie et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B79">Teressa et&#xa0;al., 2021</xref>). Evaluation of genotype &#xd7; environment interaction is necessary to introduce genotypes with higher average grain yield and lower fluctuations (stable) in different environments (<xref ref-type="bibr" rid="B77">Tariku et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B23">Bocianowski et&#xa0;al., 2019</xref>). Powerful methods are needed to investigate genotype &#xd7; environment interaction and determine the stability of genotypes. There are many different methods, including univariate and multivariate methods, to evaluate the stability of genotypes, which one or more methods can be used according to the experimental conditions. Among all stability analysis methods, it seems that two multivariate methods, additive main effects and multiplicative interactions or AMMI (<xref ref-type="bibr" rid="B27">Crossa et&#xa0;al., 1991</xref>; <xref ref-type="bibr" rid="B36">Gauch, 2006</xref>), and genotype plus genotype by environment interaction or GGE-biplot (<xref ref-type="bibr" rid="B85">Yan, 2001</xref>; <xref ref-type="bibr" rid="B86">Yan et&#xa0;al., 2010</xref>) are better and more successful methods to identify high-yielding and stable genotypes.</p>
<p>
<xref ref-type="bibr" rid="B55">Kempton (1984)</xref> was the first researcher to use the AMMI model to analyze grain yield data. The AMMI method is a combination of analysis of variance and principal components analysis, in which analysis of variance is used to determine the main effects of genotype and environment, and principal components analysis is used to determine interaction effects. This analysis is an effective method to investigate the stability of genotypes in different environments because it calculates a large part of the sum of squares of the genotype &#xd7; environment interaction and separates the main and interaction effects (<xref ref-type="bibr" rid="B36">Gauch, 2006</xref>). Considering that the effect of the environment is very large in most cases and cannot be used, removing the effect of environment and focusing on the main and genotype &#xd7; environment interaction effects can be important (<xref ref-type="bibr" rid="B87">Yan and Kang, 2002</xref>; <xref ref-type="bibr" rid="B36">Gauch, 2006</xref>). Among the multivariate stability methods, the GGE-biplot graphical method, which is based on principal component analysis, is also a very useful tool for evaluating the role of genotypes, environments, and their interaction. To evaluate the stability of genotypes in this method, the effects of genotype and genotype &#xd7; environment interaction are used to obtain more reliable results (<xref ref-type="bibr" rid="B87">Yan and Kang, 2002</xref>; <xref ref-type="bibr" rid="B88">Yan et&#xa0;al., 2007</xref>). The presence of different graphs in this method allows a better interpretation of the results, so that, it is possible to identify genotypes with higher grain yield and general stability for all environments, genotypes with specific stability for each of the target environments, and the best environments using the GGE-biplot tool (<xref ref-type="bibr" rid="B87">Yan and Kang, 2002</xref>; <xref ref-type="bibr" rid="B88">Yan et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B28">da Silva et&#xa0;al., 2021</xref>).</p>
<p>Many researchers have used AMMI and GGE-biplot methods to investigate the adaptability and stability of cultivars and genotypes in quinoa (<xref ref-type="bibr" rid="B8">Ali et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B80">Thiam et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B13">Al-Naggar et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B15">Anchico-Jojoa et&#xa0;al., 2023</xref>), maize (<xref ref-type="bibr" rid="B12">Al-Naggar et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B64">Patel et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B41">Greveniotis et&#xa0;al., 2023a</xref>), wheat (<xref ref-type="bibr" rid="B57">Mohamed et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B63">Omrani et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B43">Gupta et&#xa0;al., 2023</xref>), rice (<xref ref-type="bibr" rid="B47">Hasan et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B3">Abebe et&#xa0;al., 2023</xref>) and sorghum (<xref ref-type="bibr" rid="B10">Al-Naggar et&#xa0;al., 2018a</xref>, <xref ref-type="bibr" rid="B11">b</xref>). <xref ref-type="bibr" rid="B8">Ali et&#xa0;al. (2018)</xref> used univariate and multivariate methods to evaluate the stability of five quinoa genotypes in ten different environments in Egypt during two crop years, 2016 and 2017. They reported that the stability parameters and AMMI method were similar in identifying stable genotypes. <xref ref-type="bibr" rid="B80">Thiam et&#xa0;al. (2021)</xref> used the AMMI method to evaluate the stability of 14 quinoa genotypes in five different environments in Morocco, and classified the genotypes into three groups, stable, relatively stable and unstable. <xref ref-type="bibr" rid="B13">Al-Naggar et&#xa0;al. (2022)</xref> studied the stability and adaptability of 37 quinoa genotypes in 12 environments under different nitrogen fertilizer sources and level conditions in Egypt. They reported that the results obtained from both AMMI and GGE-biplot methods were different and each method introduced three different genotypes as stable and adaptable genotypes. <xref ref-type="bibr" rid="B15">Anchico-Jojoa et&#xa0;al. (2023)</xref> reported a significant difference between environments, genotypes, and genotype &#xd7; environment interaction using the AMMI method to evaluate the stability and adaptability of eight quinoa genotypes in Brazil and Colombia during 2018 and 2019 and introduced four quinoa genotypes with high grain yield and general adaptability.</p>
<p>A few studies have been conducted in Iran on the adaptability and stability of quinoa. <xref ref-type="bibr" rid="B19">Bagheri et&#xa0;al. (2021)</xref> studied the stability and adaptability of ten different quinoa genotypes in four environments in cold and temperate locations of Iran during the 2017 and 2018 crop years, and introduced the stable and adaptable genotypes using the AMMI method. Also, <xref ref-type="bibr" rid="B33">Etaati et&#xa0;al. (2023)</xref> evaluated the adaptability and stability of ten quinoa genotypes in different locations of Iran using different parametric and non-parametric methods, and identified a high-yielding, stable and adaptable genotype.</p>
<p>Iran is a vast country located in the Asian continent and in the Middle East region and has a very diverse climate but with an average annual temperature of 17.6&#xb0;C and an average rainfall of 266 mm (<xref ref-type="bibr" rid="B1">Abbasi et&#xa0;al., 2019</xref>), it is generally classified as a hot and dry climate. Therefore, it will be successful to cultivate plants that can tolerate the hard conditions caused by drought and heat stresses in most regions of Iran. It seems that the cultivation of quinoa as a valuable crop, especially in terms of tolerance to environmental stresses such as drought, can be successful in these conditions. Quinoa is a new crop plant in Iran, and suitable genotypes for different locations have not been introduced. The objective of the current study was to identify high-yielding and stable genotypes for the study regions, as well as to compare multivariate AMMI and GGE-biplot methods and introduce the best method for identifying stable and high-yielding genotypes.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<label>2</label>
<title>Materials and methods</title>
<sec id="s2_1">
<label>2.1</label>
<title>Plant materials and experimental locations</title>
<p>The plant materials of this study were 40 quinoa genotypes originating from Peru, Chile and Bolivia (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). All genotypes were obtained from the IPK Gene Bank, Leibniz Institute of Plant Genetics and Crop Plant Research, Germany. The experiment was carried out in a randomized complete block design (RCBD) with three replications in four locations (Buin Zahra and Takestan in Qazvin province, and Kuhdasht and Poldokhtar in Lorestan province, Iran), during 2022-2023 and 2023-2024 cropping years. The geographical and climatic characteristics of the experimental locations are presented in <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Quinoa genotypes studied in this research.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Row</th>
<th valign="middle" align="center">Genotype</th>
<th valign="middle" align="center">ID (Code)</th>
<th valign="middle" align="center">Origin</th>
<th valign="middle" align="center">Seed color</th>
<th valign="middle" align="center">Altitude<break/>(m)</th>
<th valign="middle" align="center">Row</th>
<th valign="middle" align="center">Genotype</th>
<th valign="middle" align="center">ID (Code)</th>
<th valign="middle" align="center">Origin</th>
<th valign="middle" align="center">Seed color</th>
<th valign="middle" align="center">Altitude<break/>(m)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">CHEN67</td>
<td valign="middle" align="center">D2190</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">Brown</td>
<td valign="middle" align="center">3000</td>
<td valign="middle" align="center">21</td>
<td valign="middle" align="center">CHEN167</td>
<td valign="middle" align="center">D9346</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Yellow</td>
<td valign="middle" align="center">2600</td>
</tr>
<tr>
<td valign="middle" align="center">2</td>
<td valign="middle" align="center">CHEN68</td>
<td valign="middle" align="center">D2191</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">Golden-brown</td>
<td valign="middle" align="center">3030</td>
<td valign="middle" align="center">22</td>
<td valign="middle" align="center">CHEN171</td>
<td valign="middle" align="center">D9350</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Bright-white</td>
<td valign="middle" align="center">2500</td>
</tr>
<tr>
<td valign="middle" align="center">3</td>
<td valign="middle" align="center">CHEN71</td>
<td valign="middle" align="center">D2196</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Light brown</td>
<td valign="middle" align="center">2500</td>
<td valign="middle" align="center">23</td>
<td valign="middle" align="center">CHEN172</td>
<td valign="middle" align="center">D9351</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3000</td>
</tr>
<tr>
<td valign="middle" align="center">4</td>
<td valign="middle" align="center">CHEN83</td>
<td valign="middle" align="center">D2194</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Bright-white</td>
<td valign="middle" align="center">3800</td>
<td valign="middle" align="center">24</td>
<td valign="middle" align="center">CHEN179</td>
<td valign="middle" align="center">D9358</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">2700</td>
</tr>
<tr>
<td valign="middle" align="center">5</td>
<td valign="middle" align="center">CHEN84</td>
<td valign="middle" align="center">D2195</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3870</td>
<td valign="middle" align="center">25</td>
<td valign="middle" align="center">CHEN182</td>
<td valign="middle" align="center">D9392</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3200</td>
</tr>
<tr>
<td valign="middle" align="center">6</td>
<td valign="middle" align="center">CHEN89</td>
<td valign="middle" align="center">D5078</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Bright</td>
<td valign="middle" align="center">3700</td>
<td valign="middle" align="center">26</td>
<td valign="middle" align="center">CHEN205</td>
<td valign="middle" align="center">D9416</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">2600</td>
</tr>
<tr>
<td valign="middle" align="center">7</td>
<td valign="middle" align="center">CHEN90</td>
<td valign="middle" align="center">D5079</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">2800</td>
<td valign="middle" align="center">27</td>
<td valign="middle" align="center">CHEN206</td>
<td valign="middle" align="center">D9417</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Golden</td>
<td valign="middle" align="center">2800</td>
</tr>
<tr>
<td valign="middle" align="center">8</td>
<td valign="middle" align="center">CHEN91</td>
<td valign="middle" align="center">D5081</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Golden</td>
<td valign="middle" align="center">3800</td>
<td valign="middle" align="center">28</td>
<td valign="middle" align="center">CHEN207</td>
<td valign="middle" align="center">D9418</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Bright</td>
<td valign="middle" align="center">2700</td>
</tr>
<tr>
<td valign="middle" align="center">9</td>
<td valign="middle" align="center">CHEN115</td>
<td valign="middle" align="center">D9316</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3870</td>
<td valign="middle" align="center">29</td>
<td valign="middle" align="center">CHEN209</td>
<td valign="middle" align="center">D9420</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Bright-white</td>
<td valign="middle" align="center">2900</td>
</tr>
<tr>
<td valign="middle" align="center">10</td>
<td valign="middle" align="center">CHEN119</td>
<td valign="middle" align="center">D9319</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Whitish-yellow</td>
<td valign="middle" align="center">3800</td>
<td valign="middle" align="center">30</td>
<td valign="middle" align="center">CHEN210</td>
<td valign="middle" align="center">D9421</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">2900</td>
</tr>
<tr>
<td valign="middle" align="center">11</td>
<td valign="middle" align="center">CHEN121</td>
<td valign="middle" align="center">D9336</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Yellow</td>
<td valign="middle" align="center">2900</td>
<td valign="middle" align="center">31</td>
<td valign="middle" align="center">CHEN212</td>
<td valign="middle" align="center">D9426</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Golden</td>
<td valign="middle" align="center">3000</td>
</tr>
<tr>
<td valign="middle" align="center">12</td>
<td valign="middle" align="center">CHEN123</td>
<td valign="middle" align="center">D9428</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3200</td>
<td valign="middle" align="center">32</td>
<td valign="middle" align="center">CHEN214</td>
<td valign="middle" align="center">D9429</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3100</td>
</tr>
<tr>
<td valign="middle" align="center">13</td>
<td valign="middle" align="center">CHEN126</td>
<td valign="middle" align="center">D9339</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">Bright</td>
<td valign="middle" align="center">3150</td>
<td valign="middle" align="center">33</td>
<td valign="middle" align="center">CHEN215</td>
<td valign="middle" align="center">D9730</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">Bright</td>
<td valign="middle" align="center">2800</td>
</tr>
<tr>
<td valign="middle" align="center">14</td>
<td valign="middle" align="center">CHEN128</td>
<td valign="middle" align="center">D9320</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Whitish-yellow</td>
<td valign="middle" align="center">2600</td>
<td valign="middle" align="center">34</td>
<td valign="middle" align="center">CHEN216</td>
<td valign="middle" align="center">D9431</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3150</td>
</tr>
<tr>
<td valign="middle" align="center">15</td>
<td valign="middle" align="center">CHEN133</td>
<td valign="middle" align="center">D9361</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Yellow</td>
<td valign="middle" align="center">3850</td>
<td valign="middle" align="center">35</td>
<td valign="middle" align="center">CHEN217</td>
<td valign="middle" align="center">D9432</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Bright</td>
<td valign="middle" align="center">2500</td>
</tr>
<tr>
<td valign="middle" align="center">16</td>
<td valign="middle" align="center">CHEN146</td>
<td valign="middle" align="center">D9374</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Bright-white</td>
<td valign="middle" align="center">3860</td>
<td valign="middle" align="center">36</td>
<td valign="middle" align="center">CHEN218</td>
<td valign="middle" align="center">D9434</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Whitish-yellow</td>
<td valign="middle" align="center">2600</td>
</tr>
<tr>
<td valign="middle" align="center">17</td>
<td valign="middle" align="center">CHEN151</td>
<td valign="middle" align="center">D9382</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3000</td>
<td valign="middle" align="center">37</td>
<td valign="middle" align="center">CHEN220</td>
<td valign="middle" align="center">D9439</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">Yellow</td>
<td valign="middle" align="center">3000</td>
</tr>
<tr>
<td valign="middle" align="center">18</td>
<td valign="middle" align="center">CHEN154</td>
<td valign="middle" align="center">D9385</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3100</td>
<td valign="middle" align="center">38</td>
<td valign="middle" align="center">CHEN223</td>
<td valign="middle" align="center">D9442</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Bright-white</td>
<td valign="middle" align="center">2700</td>
</tr>
<tr>
<td valign="middle" align="center">19</td>
<td valign="middle" align="center">CHEN156</td>
<td valign="middle" align="center">D9390</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">Golden</td>
<td valign="middle" align="center">2700</td>
<td valign="middle" align="center">39</td>
<td valign="middle" align="center">CHEN225</td>
<td valign="middle" align="center">D9443</td>
<td valign="middle" align="center">Peru</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">3200</td>
</tr>
<tr>
<td valign="middle" align="center">20</td>
<td valign="middle" align="center">CHEN159</td>
<td valign="middle" align="center">D9376</td>
<td valign="middle" align="center">Bolivia</td>
<td valign="middle" align="center">Brown</td>
<td valign="middle" align="center">3770</td>
<td valign="middle" align="center">40</td>
<td valign="middle" align="center">CHEN255</td>
<td valign="middle" align="center">D9502</td>
<td valign="middle" align="center">Chile</td>
<td valign="middle" align="center">White</td>
<td valign="middle" align="center">2900</td>
</tr>
</tbody>
</table>
</table-wrap>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Geographical location, elevation and soil chemical analysis for the experimental plots (Source: I.R. of Iran Meteorological Organization (<ext-link ext-link-type="uri" xlink:href="https://ndc.irimo.ir/far/wd/4641%D8%A8%D8%A7%D8%B1%D8%B4.html">https://ndc.irimo.ir/far/wd/4641%D8%A8%D8%A7%D8%B1%D8%B4.html</ext-link>).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="2" align="center">Location</th>
<th valign="middle" rowspan="2" align="center">Year</th>
<th valign="middle" colspan="3" align="center">Spring temperature (&#xb0;C)</th>
<th valign="middle" colspan="3" align="center">Summer temperature (&#xb0;C)</th>
<th valign="top" colspan="2" align="center">Solar Radiation<break/>(h)</th>
<th valign="middle" rowspan="2" align="center">Rainfall (mm)</th>
<th valign="middle" rowspan="2" align="center">Longitude</th>
<th valign="middle" rowspan="2" align="center">Latitude</th>
<th valign="middle" rowspan="2" align="center">Elevations (m)</th>
</tr>
<tr>
<th valign="middle" align="center">Min</th>
<th valign="middle" align="center">Max</th>
<th valign="middle" align="center">Average</th>
<th valign="middle" align="center">Min</th>
<th valign="middle" align="center">Max</th>
<th valign="middle" align="center">Average</th>
<th valign="top" align="center">Spring</th>
<th valign="top" align="center">Summer</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="2" align="center">Buin Zahra</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">10.1</td>
<td valign="middle" align="center">25.0</td>
<td valign="middle" align="center">17.5</td>
<td valign="middle" align="center">17.3</td>
<td valign="middle" align="center">34.5</td>
<td valign="middle" align="center">25.9</td>
<td valign="top" align="center">779.6</td>
<td valign="top" align="center">1051.4</td>
<td valign="middle" align="center">241.9</td>
<td valign="middle" rowspan="1" align="center">50<sup>&#xb0;</sup>4<sup>&#xb4;</sup>E</td>
<td valign="middle" rowspan="1" align="center">35<sup>&#xb0;</sup>46<sup>&#xb4;</sup>N</td>
<td valign="middle" rowspan="1" align="center">1210</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">11.9</td>
<td valign="middle" align="center">26.1</td>
<td valign="middle" align="center">19.0</td>
<td valign="middle" align="center">17.3</td>
<td valign="middle" align="center">34.5</td>
<td valign="middle" align="center">25.9</td>
<td valign="top" align="center">900.4</td>
<td valign="top" align="center">1084.5</td>
<td valign="middle" align="center">224.4</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Takestan</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">9.2</td>
<td valign="middle" align="center">23.3</td>
<td valign="middle" align="center">16.3</td>
<td valign="middle" align="center">16.5</td>
<td valign="middle" align="center">32.6</td>
<td valign="middle" align="center">24.5</td>
<td valign="top" align="center">761.1</td>
<td valign="top" align="center">1081.2</td>
<td valign="middle" align="center">269.2</td>
<td valign="middle" rowspan="1" align="center">46<sup>&#xb0;</sup>42<sup>&#xb4;</sup>E</td>
<td valign="middle" rowspan="1" align="center">36<sup>&#xb0;</sup>4<sup>&#xb4;</sup>N</td>
<td valign="middle" rowspan="1" align="center">1265</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">11.0</td>
<td valign="middle" align="center">24.4</td>
<td valign="middle" align="center">17.7</td>
<td valign="middle" align="center">16.4</td>
<td valign="middle" align="center">32.2</td>
<td valign="middle" align="center">24.3</td>
<td valign="top" align="center">866.2</td>
<td valign="top" align="center">1034.0</td>
<td valign="middle" align="center">272.8</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Kuhdasht</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">9.6</td>
<td valign="middle" align="center">29.0</td>
<td valign="middle" align="center">19.3</td>
<td valign="middle" align="center">17.8</td>
<td valign="middle" align="center">35.2</td>
<td valign="middle" align="center">26.5</td>
<td valign="top" align="center">797.2</td>
<td valign="top" align="center">1091.3</td>
<td valign="middle" align="center">454.6</td>
<td valign="middle" rowspan="1" align="center">47<sup>&#xb0;</sup>39<sup>&#xb4;</sup>E</td>
<td valign="middle" rowspan="1" align="center">33<sup>&#xb0;</sup>31<sup>&#xb4;</sup>N</td>
<td valign="middle" rowspan="1" align="center">1197</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">9.9</td>
<td valign="middle" align="center">29.3</td>
<td valign="middle" align="center">19.6</td>
<td valign="middle" align="center">18.2</td>
<td valign="middle" align="center">36.4</td>
<td valign="middle" align="center">27.3</td>
<td valign="top" align="center">834.3</td>
<td valign="top" align="center">1105.3</td>
<td valign="middle" align="center">405.4</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Poldokhtar</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">19.9</td>
<td valign="middle" align="center">33.6</td>
<td valign="middle" align="center">26.8</td>
<td valign="middle" align="center">24.1</td>
<td valign="middle" align="center">38.3</td>
<td valign="middle" align="center">31.2</td>
<td valign="top" align="center">847.4</td>
<td valign="top" align="center">1149.7</td>
<td valign="middle" align="center">368.7</td>
<td valign="middle" rowspan="1" align="center">47<sup>&#xb0;</sup>43<sup>&#xb4;</sup>E</td>
<td valign="middle" rowspan="1" align="center">33<sup>&#xb0;</sup>9<sup>&#xb4;</sup>N</td>
<td valign="middle" rowspan="1" align="center">714</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">18.3</td>
<td valign="middle" align="center">32.9</td>
<td valign="middle" align="center">25.6</td>
<td valign="middle" align="center">21.2</td>
<td valign="middle" align="center">38.6</td>
<td valign="middle" align="center">29.9</td>
<td valign="top" align="center">934.5</td>
<td valign="top" align="center">1203.1</td>
<td valign="middle" align="center">443.5</td>
<td valign="middle" align="center"/>
</tr>
</tbody>
</table>
</table-wrap>
<p>To provide suitable moisture for plowing as well as to stimulate the germination and emergence of weed seeds buried in the soil for better control of weeds, the experimental field was irrigated twice before tillage. After irrigation and reaching soil moisture to the field capacity, field preparation including plowing, discing, and leveling was performed. The physical and chemical characteristics of the experimental soil are presented in <xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>. Before planting and at the same time of plowing, 50, 100 and 65 kg.ha<sup>-1</sup> of N, P and K were used from the CH<sub>4</sub>N<sub>2</sub>O, P<sub>2</sub>O<sub>5</sub> and K<sub>2</sub>O sources, respectively. Moreover, 50 kg.ha<sup>&#x2212;1</sup> of urea fertilizer was used as a topdress at two stages: half in the 6-8 leaf stage and the other half before the flowering stage. The seeds of all genotypes in all four locations and in both years, were planted on April 10. The length and width of the experimental plots were 5 and 3 m and the distance between the rows and between plants on the rows were 50 and 25 cm, respectively (<xref ref-type="bibr" rid="B22">Bazile et&#xa0;al., 2016</xref>). A sprinkler irrigation system was used to irrigate quinoa plants. The first irrigation was done after sowing the genotypes, the second and third irrigation were set 4 days apart, while subsequent irrigation was scheduled between 7 and 15 days later. Soil moisture was monitored using tensiometers, and irrigation was applied when moisture levels fell below 60-80% of field capacity. The irrigation schedule was adjusted based on seasonal rainfall and key growth stages, such as germination, flowering, and seed filling, to enhance crop resilience and maximize yield. Moreover, weeds were manually removed for the entire growing season to keep the soil bare. To control pests, especially the Caradina armyworm (<italic>Spodoptera exigua</italic>), two liters per hectare of Cypermethrin 40% insecticide were used in two stages before the flowering phase. Harvesting was done at the full maturity of the grains. To measure the grain yield, all plants of each plot after removing the border effect were harvested, and the weight of grains was calculated in kg.ha<sup>-1</sup>.</p>
<table-wrap id="T3" position="float">
<label>Table&#xa0;3</label>
<caption>
<p>Soil characteristics of the experimental fields.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Location</th>
<th valign="middle" align="center">Clay (%)</th>
<th valign="middle" align="center">Silt (%)</th>
<th valign="middle" align="center">Sand (%)</th>
<th valign="middle" align="center">Available K (ppm)</th>
<th valign="middle" align="center">N (%)</th>
<th valign="middle" align="center">Available P (ppm)</th>
<th valign="middle" align="center">Organic<break/>carbon<break/>(%)</th>
<th valign="middle" align="center">pH</th>
<th valign="middle" align="center">EC (ds/m)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="center">Buin Zahra</td>
<td valign="middle" align="center">16</td>
<td valign="middle" align="center">22</td>
<td valign="middle" align="center">62</td>
<td valign="middle" align="center">273</td>
<td valign="middle" align="center">0.2</td>
<td valign="middle" align="center">4.2</td>
<td valign="middle" align="center">1.6</td>
<td valign="middle" align="center">7.9</td>
<td valign="middle" align="center">6.8</td>
</tr>
<tr>
<td valign="middle" align="center">Takestan</td>
<td valign="middle" align="center">22</td>
<td valign="middle" align="center">26</td>
<td valign="middle" align="center">52</td>
<td valign="middle" align="center">510</td>
<td valign="middle" align="center">0.5</td>
<td valign="middle" align="center">11.6</td>
<td valign="middle" align="center">4.7</td>
<td valign="middle" align="center">6.2</td>
<td valign="middle" align="center">7.4</td>
</tr>
<tr>
<td valign="middle" align="center">Kuhdasht</td>
<td valign="middle" align="center">39</td>
<td valign="middle" align="center">40</td>
<td valign="middle" align="center">21</td>
<td valign="middle" align="center">325</td>
<td valign="middle" align="center">0.1</td>
<td valign="middle" align="center">4.6</td>
<td valign="middle" align="center">0.87</td>
<td valign="middle" align="center">7.5</td>
<td valign="middle" align="center">4.6</td>
</tr>
<tr>
<td valign="middle" align="center">Poldokhtar</td>
<td valign="middle" align="center">38</td>
<td valign="middle" align="center">35</td>
<td valign="middle" align="center">27</td>
<td valign="middle" align="center">123</td>
<td valign="middle" align="center">0.3</td>
<td valign="middle" align="center">5.2</td>
<td valign="middle" align="center">0.45</td>
<td valign="middle" align="center">7.6</td>
<td valign="middle" align="center">3.6</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Data analysis</title>
<p>AMMI and GGE-biplot methods were used to investigate the stability of the grain yield of genotypes. In the AMMI method, the main effects of genotypes (G) and environments (E) as well as G&#xd7;E interaction were separated based on the following statistical model (<xref ref-type="disp-formula" rid="eq1">Equation 1</xref>) as described by <xref ref-type="bibr" rid="B35">Gauch (1988)</xref>:</p>
<disp-formula id="eq1">
<label>(1)</label>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:msub>
<mml:mtext>Y</mml:mtext>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mtext>&#xb5;</mml:mtext>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>g</mml:mtext>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>e</mml:mtext>
<mml:mi>j</mml:mi>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:mstyle displaystyle="true">
<mml:msubsup>
<mml:mo>&#x2211;</mml:mo>
<mml:mrow>
<mml:mtext>n</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mtext>p</mml:mtext>
</mml:msubsup>
<mml:mrow>
<mml:msub>
<mml:mtext>&#x3bb;</mml:mtext>
<mml:mi mathvariant="normal">n</mml:mi>
</mml:msub>
<mml:msub>
<mml:mtext>&#x3b4;</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mi mathvariant="normal">n</mml:mi>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mtext>&#x3b7;</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">j</mml:mi>
<mml:mi mathvariant="normal">n</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>&#x3b8;</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mi mathvariant="normal">j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>&#x3f5;</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mi mathvariant="normal">j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mstyle>
</mml:mrow>
</mml:math>
</disp-formula>
<p>Where Y<sub>ij</sub> is the grain yield of the i<sup>th</sup> genotype in the j<sup>th</sup> environment, &#xb5; is the total mean, g<sub>i</sub> is the main effect of the genotype, e<sub>j</sub> is the main effect of the environment, &#x39b;<sub>n</sub> is the singular value of the n<sup>th</sup> principal component, &#x3b4;<sub>in</sub> is the eigen vector score for the i<sup>th</sup> genotype of the n<sup>th</sup> principal component of the G&#xd7;E interaction, &#x273;<sub>jn</sub> is the eigenvector score for the j<sup>th</sup> environment of the n<sup>th</sup> principal component of the G&#xd7;E interaction, &#x398;<sub>ij</sub> is the residual effect and &#x3b5;<sub>ij</sub> is the experimental error.</p>
<p>The F-test is used to check the significance of the sources of variation, assuming normality and independence of the linear model. Because the AMMI model is a reduction model and the eigen values do not have the chi-square distribution, it is necessary to use corrected F-tests. Therefore, the significance tests of G&#xd7;E interaction components were performed using the FR or Cornelius test based on the <xref ref-type="disp-formula" rid="eq2">Equation 2</xref> (<xref ref-type="bibr" rid="B26">Cornelius et&#xa0;al., 1992</xref>):</p>
<disp-formula id="eq2">
<label>(2)</label>
<mml:math display="block" id="M2">
<mml:mrow>
<mml:msub>
<mml:mtext>F</mml:mtext>
<mml:mi>R</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>SS</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">G</mml:mi>
<mml:mi mathvariant="normal">E</mml:mi>
<mml:mi mathvariant="normal">I</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:mstyle displaystyle="true">
<mml:msubsup>
<mml:mo>&#x2211;</mml:mo>
<mml:mrow>
<mml:mi mathvariant="normal">k</mml:mi>
<mml:mo>=</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mi mathvariant="normal">n</mml:mi>
</mml:msubsup>
<mml:mrow>
<mml:msup>
<mml:mover accent="true">
<mml:mi mathvariant="normal">&#x3bb;</mml:mi>
<mml:mo>^</mml:mo>
</mml:mover>
<mml:mn>2</mml:mn>
</mml:msup>
</mml:mrow>
</mml:mstyle>
</mml:mrow>
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mtext>fs</mml:mtext>
</mml:mrow>
<mml:mn>2</mml:mn>
</mml:msup>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<p>Where SS<sub>GEI</sub> is the sum of squares of the G&#xd7;E interaction, <inline-formula>
<mml:math display="inline" id="im1">
<mml:mrow>
<mml:mstyle displaystyle="true">
<mml:msubsup>
<mml:mo>&#x2211;</mml:mo>
<mml:mrow>
<mml:mi mathvariant="normal">k</mml:mi>
<mml:mo>=</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mi mathvariant="normal">n</mml:mi>
</mml:msubsup>
<mml:mrow>
<mml:msup>
<mml:mover accent="true">
<mml:mi mathvariant="normal">&#x3bb;</mml:mi>
<mml:mo>^</mml:mo>
</mml:mover>
<mml:mn>2</mml:mn>
</mml:msup>
</mml:mrow>
</mml:mstyle>
</mml:mrow>
</mml:math>
</inline-formula> is the sum of squares of the nth principal component, f is the Cornelius degree of freedom (<xref ref-type="disp-formula" rid="eq3">Equation 3</xref>), and S2 is the error mean square.</p>
<disp-formula id="eq3">
<label>(3)</label>
<mml:math display="block" id="M3">
<mml:mrow>
<mml:mtext>f</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mtext>(g</mml:mtext>
<mml:mo>-</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>-</mml:mo>
<mml:mtext>m)(e</mml:mtext>
<mml:mo>-</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>-</mml:mo>
<mml:mtext>m)</mml:mtext>
</mml:mrow>
</mml:math>
</disp-formula>
<p>In this formula, g is the number of genotypes, e is the number of environment and m is the number of main components. FR or Cornelius test was performed based on IML procedure in SAS software (<xref ref-type="bibr" rid="B70">SAS Institute, 2017</xref>).</p>
<p>AMMI stability value (ASV) was calculated using the <xref ref-type="disp-formula" rid="eq4">Equation 4</xref> (<xref ref-type="bibr" rid="B66">Purchase et&#xa0;al., 2000</xref>):</p>
<disp-formula id="eq4">
<label>(4)</label>
<mml:math display="block" id="M4">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>ASV</mml:mtext>
</mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:msqrt>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>SS</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">I</mml:mi>
<mml:mi mathvariant="normal">P</mml:mi>
<mml:mi mathvariant="normal">C</mml:mi>
<mml:mi mathvariant="normal">A</mml:mi>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>SS</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">I</mml:mi>
<mml:mi mathvariant="normal">P</mml:mi>
<mml:mi mathvariant="normal">C</mml:mi>
<mml:mi mathvariant="normal">A</mml:mi>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
<mml:msup>
<mml:mrow>
<mml:mtext>(IPCA</mml:mtext>
<mml:mn>1</mml:mn>
<mml:mtext>&#xa0;Score)</mml:mtext>
</mml:mrow>
<mml:mn>2</mml:mn>
</mml:msup>
<mml:mo>+</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mtext>(IPCA</mml:mtext>
<mml:mn>1</mml:mn>
<mml:mtext>&#xa0;Score</mml:mtext>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
<mml:mn>2</mml:mn>
</mml:msup>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
</mml:msqrt>
</mml:mrow>
</mml:math>
</disp-formula>
<p>Where IPCA<sub>1</sub> and IPCA<sub>2</sub> scores are the values of the first and second interaction principal components for each genotype, and SS<sub>IPCA1</sub> and SS<sub>IPCA2</sub> are the sum of squares of the first and second interaction principal components, respectively.</p>
<p>In the AMMI method, a distribution diagram of genotypes and environments is drawn based on the average grain yield and the first principal component score (AMMI1 biplot) to identify stable and high-yielding genotypes. Additionally, a diagram resulting from the scores of the first two principal components is drawn to identify stable genotypes in all environments and to identify unstable genotypes (<xref ref-type="bibr" rid="B35">Gauch, 1988</xref>).</p>
<p>The GGE-biplot method, which is actually a type of principal component analysis for the sum of the main effect of genotype and the interaction effect of G&#xd7;E, and uses the singular value decomposition (SVD), was performed based on the following statistical model (<xref ref-type="bibr" rid="B85">Yan, 2001</xref>):</p>
<disp-formula id="eq5">
<label>(5)</label>
<mml:math display="block" id="M5">
<mml:mrow>
<mml:msub>
<mml:mtext>Y</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mi mathvariant="normal">j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mtext>&#xb5;</mml:mtext>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>e</mml:mtext>
<mml:mi mathvariant="normal">j</mml:mi>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>&#x3bb;</mml:mtext>
<mml:mn>1</mml:mn>
</mml:msub>
<mml:msub>
<mml:mtext>&#x3b4;</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mtext>&#x3b7;</mml:mtext>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mi mathvariant="normal">j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mtext>&#x3bb;</mml:mtext>
<mml:mn>2</mml:mn>
</mml:msub>
<mml:msub>
<mml:mtext>&#x3b4;</mml:mtext>
<mml:mrow>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mi>&#x3b7;</mml:mi>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mi mathvariant="normal">j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>&#x3f5;</mml:mi>
<mml:mrow>
<mml:mtext>ij</mml:mtext>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</disp-formula>
<p>In <xref ref-type="disp-formula" rid="eq5">Equation 5</xref>, Y<sub>ij</sub> is the grain yield of the i<sup>th</sup> genotype in the j<sup>th</sup> environment, &#xb5; is the total mean, e<sub>j</sub> is the main effect of environment, &#x39b;<sub>1</sub> and &#x39b;<sub>2</sub> are the singular values of the first two principal components, PC1 and PC2, respectively, &#x3b4;<sub>i1</sub> and &#x3b4;<sub>i2</sub> are the eigen vectors of the i<sup>th</sup> genotype for PC1 and PC2, respectively, &#x273;<sub>1j</sub> and &#x273;<sub>2j</sub> are the eigen vectors of the j<sup>th</sup> environment for PC1 and PC2, respectively, and &#x3b5;<sub>ij</sub> is the residual value that cannot be explained by G&#xd7;E interaction effect.</p>
<p>In the GGE-biplot method, the Which-Won-Where diagram was drawn to identify mega-environments and stable genotypes in each mega-environment. The GGE-biplot vector view was drawn to study the relationships between the studied environments. The GGE-biplot mean versus stability diagram was drawn to compare the studied genotypes with ideal genotypes, and the environment ranking pattern was drawn to compare the studied environments with the ideal environment. Using the graphs obtained from the GGE-biplot, the best environment, the best genotype for each environment, and the general stable genotype with higher grain yield for all environments were identified (<xref ref-type="bibr" rid="B28">da Silva et&#xa0;al., 2021</xref>). Stability analysis based on both AMMI and GGE-biplot methods was performed using PB Tools version 1.4 software (<ext-link ext-link-type="uri" xlink:href="http://bbi.irri.org/products">http://bbi.irri.org/products</ext-link>).</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results</title>
<sec id="s3_1">
<label>3.1</label>
<title>AMMI analysis</title>
<p>The combined variance analysis of grain yield data of 40 quinoa genotypes in eight environments (<xref ref-type="table" rid="T4">
<bold>Table&#xa0;4</bold>
</xref>) showed that the effects of G, E, and G&#xd7;E interaction were highly significant (P &#x2264; 0.01), indicating a significant difference in average grain yield among environments and genotypes, as well as the fluctuation of the grain yield of quinoa genotypes from one environment to another. Therefore, it is possible to identify high-yielding genotypes with general stability for all environments as well as suitable and high-yielding genotypes for each environment using stability analysis. The results of the AMMI analysis of variance (<xref ref-type="table" rid="T4">
<bold>Table&#xa0;4</bold>
</xref>) also showed that G, E, and G&#xd7;E interaction explained 63.0%, 4.3% and 29.7% of the total variation, respectively. The higher contribution of the genotype can be attributed to the high genetic diversity of the studied genotypes. Also, the description of 29.7% of the total variation by G&#xd7;E interaction can be related to the difference between genotypes and the difference in climatic conditions of the studied environments, so that these differences led to different reactions of quinoa genotypes in different environments. Separation of the G&#xd7;E interaction based on the principal component analysis method also showed that the effects of the first six principal components were significant and explained 47.6%, 22.5%, 9%, 7%, 6%, and 4.3% of the G&#xd7;E interaction variance, respectively. Also, these six principal components justified 14.1%, 6.7%, 2.7%, 2.1%, 1.8%, 1.3%, and 1.1% of the total variance, respectively (<xref ref-type="table" rid="T4">
<bold>Table&#xa0;4</bold>
</xref>). The distribution diagram of genotypes and environments based on average grain yield and the first principal component score (AMMI1 biplot) is presented in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>. Based on this biplot, by increasing the contribution of the first principal component in explaining the variance of the G&#xd7;E interaction, stable genotypes can be identified more accurately.</p>
<table-wrap id="T4" position="float">
<label>Table&#xa0;4</label>
<caption>
<p>AMMI analysis of variance for grain yield of 40 quinoa genotypes across eight environments.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Source of variation</th>
<th valign="middle" align="center">df</th>
<th valign="middle" align="center">Sum of square</th>
<th valign="middle" align="center">Mean square</th>
<th valign="middle" align="center">df <sub>Cornelius</sub>
</th>
<th valign="middle" align="center">F <sub>Cornelius</sub>
</th>
<th valign="middle" align="center">Total variance proportion (%)</th>
<th valign="middle" align="center">G&#xd7;E variance proportion (%)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="center">Treatment</td>
<td valign="middle" align="center">319</td>
<td valign="middle" align="center">1330815058</td>
<td valign="middle" align="center">4171834<sup>**</sup>
</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">97.1</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">Genotype</td>
<td valign="middle" align="center">39</td>
<td valign="middle" align="center">864054870</td>
<td valign="middle" align="center">22155253<sup>**</sup>
</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">63.0</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">Environment</td>
<td valign="middle" align="center">7</td>
<td valign="middle" align="center">59506151</td>
<td valign="middle" align="center">8500879<sup>**</sup>
</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">4.3</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">Block (Environment)</td>
<td valign="middle" align="center">16</td>
<td valign="middle" align="center">3342338</td>
<td valign="middle" align="center">208896<sup>**</sup>
</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">0.2</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">Interaction</td>
<td valign="middle" align="center">273</td>
<td valign="middle" align="center">407354037</td>
<td valign="middle" align="center">1492139<sup>**</sup>
</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">29.7</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">IPCA1</td>
<td valign="middle" align="center">45</td>
<td valign="middle" align="center">193814423</td>
<td valign="top" align="center">4306987</td>
<td valign="middle" align="center">228</td>
<td valign="middle" align="center">7.90<sup>**</sup>
</td>
<td valign="middle" align="center">14.1</td>
<td valign="middle" align="center">47.6</td>
</tr>
<tr>
<td valign="middle" align="center">IPCA2</td>
<td valign="middle" align="center">43</td>
<td valign="middle" align="center">91489321</td>
<td valign="top" align="center">2127659</td>
<td valign="middle" align="center">185</td>
<td valign="middle" align="center">5.56<sup>**</sup>
</td>
<td valign="middle" align="center">6.7</td>
<td valign="middle" align="center">22.5</td>
</tr>
<tr>
<td valign="middle" align="center">IPCA3</td>
<td valign="middle" align="center">41</td>
<td valign="middle" align="center">36669307</td>
<td valign="top" align="center">894373.3</td>
<td valign="middle" align="center">144</td>
<td valign="middle" align="center">5.00<sup>**</sup>
</td>
<td valign="middle" align="center">2.7</td>
<td valign="middle" align="center">9.0</td>
</tr>
<tr>
<td valign="middle" align="center">IPCA4</td>
<td valign="middle" align="center">39</td>
<td valign="middle" align="center">28449892</td>
<td valign="top" align="center">729484.4</td>
<td valign="middle" align="center">105</td>
<td valign="middle" align="center">4.57<sup>**</sup>
</td>
<td valign="middle" align="center">2.1</td>
<td valign="middle" align="center">7.0</td>
</tr>
<tr>
<td valign="middle" align="center">IPCA5</td>
<td valign="middle" align="center">37</td>
<td valign="middle" align="center">24611587</td>
<td valign="top" align="center">665178</td>
<td valign="middle" align="center">68</td>
<td valign="middle" align="center">4.01<sup>**</sup>
</td>
<td valign="middle" align="center">1.8</td>
<td valign="middle" align="center">6.0</td>
</tr>
<tr>
<td valign="middle" align="center">IPCA6</td>
<td valign="middle" align="center">35</td>
<td valign="middle" align="center">17420554</td>
<td valign="top" align="center">497730.1</td>
<td valign="middle" align="center">33</td>
<td valign="middle" align="center">3.81<sup>**</sup>
</td>
<td valign="middle" align="center">1.3</td>
<td valign="middle" align="center">4.3</td>
</tr>
<tr>
<td valign="middle" align="center">Residual</td>
<td valign="middle" align="center">33</td>
<td valign="middle" align="center">14898953</td>
<td valign="top" align="center">451483.4</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">1.1</td>
<td valign="middle" align="center">3.7</td>
</tr>
<tr>
<td valign="middle" align="center">Error</td>
<td valign="middle" align="center">624</td>
<td valign="middle" align="center">37002556</td>
<td valign="top" align="center">59298.97</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">2.7</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">Total</td>
<td valign="middle" align="center">959</td>
<td valign="middle" align="center">1371159952</td>
<td valign="top" align="center">1429781</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>AMMI1 biplot of quinoa genotypes and environments based on the first principal component and grain yield.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1487106-g001.tif"/>
</fig>
<p>The average grain yield of the studied environments along with the IPCA<sub>e</sub>1 and IPCA<sub>e</sub>2 scores and the AMMI stability values (ASVs) are presented in <xref ref-type="table" rid="T5">
<bold>Table&#xa0;5</bold>
</xref>. The environments of Buin Zahra and Takestan in 2022 had the lowest ASV values. In other words, the yield fluctuations of genotypes in these two environments were less than the other environments, but these environments had a lower average grain yield than the total mean (2721 kg.ha<sup>-1</sup>). Among the studied environments, however in 2023, Takestan and Buin Zahra with 3030 and 3021 kg.ha<sup>-1</sup>, respectively, had a higher average grain yield than the total mean (<xref ref-type="table" rid="T5">
<bold>Table&#xa0;5</bold>
</xref>; <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). The comparison of IPCA<sub>e</sub>1 and IPCA<sub>e</sub>2 scores also showed that Takestan and Poldokhtar environments had the lowest and highest values for the first and second components in 2022, respectively, indicating that quinoa genotypes had the lower and higher fluctuations in these environments compared to the other environments, respectively (<xref ref-type="table" rid="T5">
<bold>Table&#xa0;5</bold>
</xref>). ASV values also showed that Takestan was a better environment and quinoa genotypes had less fluctuations in this environment, while Poldokhtar was not a suitable climate for the studied genotypes (<xref ref-type="table" rid="T5">
<bold>Table&#xa0;5</bold>
</xref>).</p>
<table-wrap id="T5" position="float">
<label>Table&#xa0;5</label>
<caption>
<p>Mean, IPCAe1and IPCAe2 scores, and AMMI stability value (ASV) of eight environments (four locations and two years).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Location</th>
<th valign="top" align="center">Year</th>
<th valign="middle" align="center">ID (Code)</th>
<th valign="middle" align="center">Mean (kg.ha<sup>-1</sup>)</th>
<th valign="middle" align="center">IPCA<sub>e</sub>1</th>
<th valign="middle" align="center">IPCA<sub>e</sub>2</th>
<th valign="middle" align="center">ASV<sub>e</sub>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="2" align="center">Buin Zahra</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">E1</td>
<td valign="middle" align="center">2641</td>
<td valign="middle" align="center">-31.97</td>
<td valign="middle" align="center">-3.82</td>
<td valign="middle" align="center">46.69</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">E2</td>
<td valign="middle" align="center">3021</td>
<td valign="middle" align="center">-33.17</td>
<td valign="middle" align="center">-24.17</td>
<td valign="middle" align="center">53.98</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Takestan</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">E3</td>
<td valign="middle" align="center">2663</td>
<td valign="middle" align="center">-20.74</td>
<td valign="middle" align="center">7.91</td>
<td valign="middle" align="center">31.20</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">E4</td>
<td valign="middle" align="center">3030</td>
<td valign="middle" align="center">-37.54</td>
<td valign="middle" align="center">4.46</td>
<td valign="middle" align="center">54.80</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Kuhdasht</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">E5</td>
<td valign="top" align="center">2887</td>
<td valign="middle" align="center">22.21</td>
<td valign="middle" align="center">34.47</td>
<td valign="middle" align="center">47.26</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">E6</td>
<td valign="top" align="center">2359</td>
<td valign="middle" align="center">23.84</td>
<td valign="middle" align="center">42.26</td>
<td valign="middle" align="center">54.67</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Poldokhtar</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">E7</td>
<td valign="top" align="center">2814</td>
<td valign="middle" align="center">41.93</td>
<td valign="middle" align="center">-30.86</td>
<td valign="middle" align="center">68.38</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">E8</td>
<td valign="top" align="center">2356</td>
<td valign="middle" align="center">35.43</td>
<td valign="middle" align="center">-30.25</td>
<td valign="middle" align="center">59.78</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="center">Total mean</td>
<td valign="middle" align="center">2022</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">2751</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">2023</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">2692</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The average grain yield, IPCA<sub>g</sub>1 and IPCA<sub>g</sub>2 scores as well as the ASV values for the studied genotypes are shown in <xref ref-type="table" rid="T6">
<bold>Table&#xa0;6</bold>
</xref>. The average grain yield of quinoa genotypes ranged from 1070 kg.ha<sup>-1</sup> in the G40 genotype to 4977 kg.ha<sup>-1</sup> in the G16 genotype (<xref ref-type="table" rid="T6">
<bold>Table&#xa0;6</bold>
</xref>). Genotypes G15, G16, G18, G6, G12, G19, G11, G24, G26 and G4 had the lowest IPCA<sub>g</sub>1 score, respectively (<xref ref-type="table" rid="T6">
<bold>Table&#xa0;6</bold>
</xref>). The ASV index also identified genotypes G16, G19, G11, G24, G21, G39, G2, G35, G18, and G30 with the lowest score as the stable genotypes (<xref ref-type="table" rid="T6">
<bold>Table&#xa0;6</bold>
</xref>). It should be noted that the ASV index emphasizes only the stability aspect of the genotypes, while the grain yield of the genotypes should also be considered. Therefore, among the above-mentioned genotypes, genotypes G16, G19, G35, G30, G39, G24, and G18 (with higher grain yield than total average and located at the origin of the AMMI biplot) are introduced as general stable genotypes (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). In contrast, genotypes G36, G27, G38, G9, G28, G29, G23, G34, G13, and G12 with the highest ASV value (<xref ref-type="table" rid="T6">
<bold>Table&#xa0;6</bold>
</xref>) and located in the farthest points from the origin of the biplot (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>), are introduced as the most unstable genotypes in the studied environments.</p>
<table-wrap id="T6" position="float">
<label>Table&#xa0;6</label>
<caption>
<p>Mean, IPCA-1 and IPCA-2 scores, and AMMI stability value (ASV) of 40 quinoa genotypes for grain yield.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Genotype</th>
<th valign="middle" align="center">Mean<break/>(kg.ha<sup>-1</sup>)</th>
<th valign="middle" align="center">IPCA<sub>g</sub>1</th>
<th valign="middle" align="center">IPCA<sub>g</sub>2</th>
<th valign="middle" align="center">ASV<sub>g</sub>
</th>
<th valign="middle" align="center">Genotype</th>
<th valign="middle" align="center">Mean (kg.ha<sup>-1</sup>)</th>
<th valign="middle" align="center">IPCA<sub>g</sub>1</th>
<th valign="middle" align="center">IPCA<sub>g</sub>2</th>
<th valign="middle" align="center">ASV<sub>g</sub>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="center">G1</td>
<td valign="top" align="center">2871</td>
<td valign="middle" align="center">-10.99</td>
<td valign="middle" align="center">8.01</td>
<td valign="middle" align="center">17.89</td>
<td valign="middle" align="center">G21</td>
<td valign="top" align="center">1404</td>
<td valign="middle" align="center">7.60</td>
<td valign="middle" align="center">-2.00</td>
<td valign="middle" align="center">11.24</td>
</tr>
<tr>
<td valign="middle" align="center">G2</td>
<td valign="top" align="center">1989</td>
<td valign="middle" align="center">-8.79</td>
<td valign="middle" align="center">4.67</td>
<td valign="middle" align="center">13.61</td>
<td valign="middle" align="center">G22</td>
<td valign="top" align="center">2476</td>
<td valign="middle" align="center">-16.11</td>
<td valign="middle" align="center">-2.92</td>
<td valign="middle" align="center">23.62</td>
</tr>
<tr>
<td valign="middle" align="center">G3</td>
<td valign="top" align="center">2646</td>
<td valign="middle" align="center">-10.21</td>
<td valign="middle" align="center">-16.15</td>
<td valign="middle" align="center">21.94</td>
<td valign="middle" align="center">G23</td>
<td valign="top" align="center">2706</td>
<td valign="middle" align="center">-20.37</td>
<td valign="middle" align="center">4.49</td>
<td valign="middle" align="center">29.98</td>
</tr>
<tr>
<td valign="middle" align="center">G4</td>
<td valign="top" align="center">1418</td>
<td valign="middle" align="center">6.86</td>
<td valign="middle" align="center">20.66</td>
<td valign="middle" align="center">22.94</td>
<td valign="middle" align="center">G24</td>
<td valign="top" align="center">3125</td>
<td valign="middle" align="center">-5.17</td>
<td valign="middle" align="center">6.15</td>
<td valign="middle" align="center">9.72</td>
</tr>
<tr>
<td valign="middle" align="center">G5</td>
<td valign="top" align="center">2978</td>
<td valign="middle" align="center">12.35</td>
<td valign="middle" align="center">-14.54</td>
<td valign="middle" align="center">23.11</td>
<td valign="middle" align="center">G25</td>
<td valign="top" align="center">3699</td>
<td valign="middle" align="center">-18.02</td>
<td valign="middle" align="center">-7.01</td>
<td valign="middle" align="center">27.14</td>
</tr>
<tr>
<td valign="middle" align="center">G6</td>
<td valign="top" align="center">1730</td>
<td valign="middle" align="center">1.40</td>
<td valign="middle" align="center">-16.92</td>
<td valign="middle" align="center">17.04</td>
<td valign="middle" align="center">G26</td>
<td valign="top" align="center">2101</td>
<td valign="middle" align="center">-6.36</td>
<td valign="middle" align="center">14.03</td>
<td valign="middle" align="center">16.80</td>
</tr>
<tr>
<td valign="middle" align="center">G7</td>
<td valign="top" align="center">3290</td>
<td valign="middle" align="center">8.55</td>
<td valign="middle" align="center">-12.13</td>
<td valign="middle" align="center">17.38</td>
<td valign="middle" align="center">G27</td>
<td valign="top" align="center">1547</td>
<td valign="middle" align="center">28.00</td>
<td valign="middle" align="center">-3.44</td>
<td valign="middle" align="center">40.88</td>
</tr>
<tr>
<td valign="middle" align="center">G8</td>
<td valign="top" align="center">1607</td>
<td valign="middle" align="center">-18.68</td>
<td valign="middle" align="center">-0.23</td>
<td valign="middle" align="center">27.18</td>
<td valign="middle" align="center">G28</td>
<td valign="top" align="center">3131</td>
<td valign="middle" align="center">-17.22</td>
<td valign="middle" align="center">20.09</td>
<td valign="middle" align="center">32.11</td>
</tr>
<tr>
<td valign="middle" align="center">G9</td>
<td valign="top" align="center">2582</td>
<td valign="middle" align="center">-23.61</td>
<td valign="middle" align="center">1.31</td>
<td valign="middle" align="center">34.38</td>
<td valign="middle" align="center">G29</td>
<td valign="top" align="center">3298</td>
<td valign="middle" align="center">17.19</td>
<td valign="middle" align="center">19.51</td>
<td valign="middle" align="center">31.72</td>
</tr>
<tr>
<td valign="middle" align="center">G10</td>
<td valign="top" align="center">2629</td>
<td valign="middle" align="center">-14.00</td>
<td valign="middle" align="center">-9.94</td>
<td valign="middle" align="center">22.67</td>
<td valign="middle" align="center">G30</td>
<td valign="top" align="center">3603</td>
<td valign="middle" align="center">11.41</td>
<td valign="middle" align="center">-1.93</td>
<td valign="middle" align="center">16.71</td>
</tr>
<tr>
<td valign="middle" align="center">G11</td>
<td valign="top" align="center">1816</td>
<td valign="middle" align="center">-5.03</td>
<td valign="middle" align="center">-2.50</td>
<td valign="middle" align="center">7.73</td>
<td valign="middle" align="center">G31</td>
<td valign="top" align="center">3854</td>
<td valign="middle" align="center">-12.36</td>
<td valign="middle" align="center">9.03</td>
<td valign="middle" align="center">20.13</td>
</tr>
<tr>
<td valign="middle" align="center">G12</td>
<td valign="top" align="center">1839</td>
<td valign="middle" align="center">3.97</td>
<td valign="middle" align="center">27.36</td>
<td valign="middle" align="center">27.96</td>
<td valign="middle" align="center">G32</td>
<td valign="top" align="center">1783</td>
<td valign="middle" align="center">-16.80</td>
<td valign="middle" align="center">-4.82</td>
<td valign="middle" align="center">24.92</td>
</tr>
<tr>
<td valign="middle" align="center">G13</td>
<td valign="top" align="center">2769</td>
<td valign="middle" align="center">17.03</td>
<td valign="middle" align="center">13.66</td>
<td valign="middle" align="center">28.30</td>
<td valign="middle" align="center">G33</td>
<td valign="top" align="center">3698</td>
<td valign="middle" align="center">12.51</td>
<td valign="middle" align="center">-0.45</td>
<td valign="middle" align="center">18.21</td>
</tr>
<tr>
<td valign="middle" align="center">G14</td>
<td valign="top" align="center">2953</td>
<td valign="middle" align="center">14.29</td>
<td valign="middle" align="center">-12.84</td>
<td valign="middle" align="center">24.44</td>
<td valign="middle" align="center">G34</td>
<td valign="top" align="center">2903</td>
<td valign="middle" align="center">17.40</td>
<td valign="middle" align="center">-12.83</td>
<td valign="middle" align="center">28.39</td>
</tr>
<tr>
<td valign="middle" align="center">G15</td>
<td valign="top" align="center">2636</td>
<td valign="middle" align="center">-0.50</td>
<td valign="middle" align="center">-26.89</td>
<td valign="middle" align="center">26.90</td>
<td valign="middle" align="center">G35</td>
<td valign="top" align="center">4263</td>
<td valign="middle" align="center">8.35</td>
<td valign="middle" align="center">6.35</td>
<td valign="middle" align="center">13.72</td>
</tr>
<tr>
<td valign="middle" align="center">G16</td>
<td valign="top" align="center">4977</td>
<td valign="middle" align="center">-0.58</td>
<td valign="middle" align="center">-2.11</td>
<td valign="middle" align="center">2.27</td>
<td valign="middle" align="center">G36</td>
<td valign="top" align="center">1752</td>
<td valign="middle" align="center">28.63</td>
<td valign="middle" align="center">9.70</td>
<td valign="middle" align="center">42.77</td>
</tr>
<tr>
<td valign="middle" align="center">G17</td>
<td valign="top" align="center">4418</td>
<td valign="middle" align="center">13.32</td>
<td valign="middle" align="center">1.49</td>
<td valign="middle" align="center">19.45</td>
<td valign="middle" align="center">G37</td>
<td valign="top" align="center">2001</td>
<td valign="middle" align="center">-16.04</td>
<td valign="middle" align="center">-7.63</td>
<td valign="middle" align="center">24.55</td>
</tr>
<tr>
<td valign="middle" align="center">G18</td>
<td valign="top" align="center">2785</td>
<td valign="middle" align="center">-0.98</td>
<td valign="middle" align="center">-16.18</td>
<td valign="middle" align="center">16.24</td>
<td valign="middle" align="center">G38</td>
<td valign="top" align="center">1842</td>
<td valign="middle" align="center">23.92</td>
<td valign="middle" align="center">-11.24</td>
<td valign="middle" align="center">36.58</td>
</tr>
<tr>
<td valign="middle" align="center">G19</td>
<td valign="top" align="center">4901</td>
<td valign="middle" align="center">-4.11</td>
<td valign="middle" align="center">0.81</td>
<td valign="middle" align="center">6.03</td>
<td valign="middle" align="center">G39</td>
<td valign="top" align="center">3206</td>
<td valign="middle" align="center">-7.59</td>
<td valign="middle" align="center">-2.23</td>
<td valign="middle" align="center">11.26</td>
</tr>
<tr>
<td valign="middle" align="center">G20</td>
<td valign="top" align="center">2556</td>
<td valign="middle" align="center">-12.42</td>
<td valign="middle" align="center">8.50</td>
<td valign="middle" align="center">19.97</td>
<td valign="middle" align="center">G40</td>
<td valign="top" align="center">1070</td>
<td valign="middle" align="center">13.12</td>
<td valign="middle" align="center">11.12</td>
<td valign="middle" align="center">22.10</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>AMMI biplot based on the first and second principal components.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1487106-g002.tif"/>
</fig>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>GGE-biplot analysis</title>
<p>GGE-biplot analysis showed that the first two principal components accounted for 83.3% of the variance of G + G&#xd7;E interaction, of which 68.1% and 15.2% were explained by the first principal component (PC<sub>1</sub>), and the second principal component (PC<sub>2</sub>), respectively. To determine the best genotypes for each of the studied environments, the GGE-biplot polygon view (Which-Won-Where pattern) was presented (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>). GGE-biplot identified two mega-environments, including Buin Zahra and Takestan locations in both years (E1, E2, E3 and E4), and Kuhdasht and Poldokhtar in both years (E5, E6, E7 and E8), respectively. Also, genotypes G16, G19, G25, G9, G8, G40, G27, and G17 were placed in the vertices of polygon, but genotypes G16, G19, and G25 (with grain yield of 4977, 4901 and 3699 kg.ha<sup>-1</sup>, respectively) in the first mega-environment and genotype G17 (4418 kg.ha<sup>-1</sup>) in the second mega-environment were identified as superior genotypes with higher adaptability. Moreover, genotypes G31, G39, G24, G28, and G18 in the first mega-environment and genotypes G35, G33, G30, G7, G29, G5, G14, and G34 in the second mega-environment showed a high correlation with the genotypes of the vertices of polygon, and with relatively suitable grain yield were compatible genotypes to these environments, the Genotypes G9, G8, G40, and G27 were also placed in the vertices of polygon, but they did not produce high grain yield in any of the studied environments (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>&#x201c;Which-Won-Where&#x201d; pattern of GGE-biplot polygon view to determine the superior genotypes in different environments.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1487106-g003.tif"/>
</fig>
<p>The vector view of GGE-biplot was used to study the relationships between environments (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). The results showed that the angle between the vectors of Buin Zahra and Takestan in both years (E1, E2, E3 and E4) as well as Kuhdasht and Poldokhtar in both years (E5, E6, E7 and E8) was small, which indicated a high correlation between them. The correlation between Buin Zahra and Takestan in both years with Kuhdasht and Poldokhtar in both years (E1, E2, E3 and E4 with E5, E6, E7 and E8) was low due to the large angle between their vectors. In total, the biplot study of the relationships between environments showed a high discrimination power in all the experimental environments. While all environments had long vectors, the vector length of Takestan and Buin Zahra in 2023 (E2 and E4) was longer than the vector length of other environments, indicating the high influence of these environments on differentiating genotypes compared to other studied environments. On the other hand, Kuhdasht had the smaller length vectors in both years (E5 and E6) compared to other environments (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>), indicating lower fluctuations and higher stability of the grain yield of quinoa genotypes in this location.</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>The vector view of GGE-biplot to study the relationships between the studied environments.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1487106-g004.tif"/>
</fig>
<p>The comparison of the ideal genotype with the studied quinoa genotypes is shown in <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>. The vertical line on the average environment axis (AEA) indicated with two arrows, is used to determine the stability of genotypes. Genotypes closer to the origin of AEA are more stable than genotypes closer to the end of this axis (<xref ref-type="bibr" rid="B32">Esan et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B54">Kebede et&#xa0;al., 2023</xref>). Therefore, genotypes G16, G19, G17, G35, and G31, which are closer to the AEA (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>), were more stable than other genotypes in all environments. These genotypes with higher grain yield than total mean, had a relatively constant grain yield ranking in all environments. While genotypes G36, G27, G38, G9, G8, G32, G37, G28, G29, and G22 had less stability due to the longer distance from the AEA (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>). Furthermore, the GGE-biplot genotype view showed that genotypes G16 and G19, followed by G17, G35 and G31, which were placed in the center of the concentric circles, were the most ideal genotypes in this experiment. In contrast, genotypes G40, G4, G21, G27, G36, G38, and G32 were the weakest quinoa genotypes in terms of grain yield and stability in this experiment.</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>&#x2018;Mean vs. stability&#x2019; pattern of GGE-biplot to compare the studied genotypes with the ideal genotype.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1487106-g005.tif"/>
</fig>
<p>The GGE-biplot environment ranking pattern to compare the studied environments with the ideal environment is shown in <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>. The ideal environment (center of the concentric circles) as a representative of other studied environments, has the highest ability to differentiate genotypes (<xref ref-type="bibr" rid="B32">Esan et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B54">Kebede et&#xa0;al., 2023</xref>). The&#xa0;results showed that Takestan in 2022 (E3) can be introduced as the best environment due to the smallest distance from the ideal environment as well as the smallest angle with the AEA vector. After that, Kuhdasht in both 2022 and 2023 years (E5 and E6) were suitable environments for the studied quinoa genotypes in this experiment (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>).</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>The GGE-biplot &#x2018;environment ranking&#x2019; pattern to compare the studied environments with the ideal environment.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1487106-g006.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<label>4</label>
<title>Discussion</title>
<p>Quinoa is known as a key crop for food security in many countries of the world, which can produce products in more than 120 countries, but on the one hand, the high climatic diversity in different regions and, on the other hand, the existence of environment &#xd7; genotype interaction, requires the introduction and cultivation of stable and adapted genotypes to these areas (<xref ref-type="bibr" rid="B7">Alandia et&#xa0;al., 2020</xref>). There are various statistical methods to study genotype &#xd7; environment interaction and identify stable genotypes, among which AMMI and GGE-biplot provide better and more interpretable results (<xref ref-type="bibr" rid="B37">Gauch et&#xa0;al., 2008</xref>). In the AMMI method, the genotype &#xd7; environment interaction is separated from the environment and genotype effects, and then this interaction is analyzed using PCA (<xref ref-type="bibr" rid="B91">Zobel et&#xa0;al., 1988</xref>), While in the GGE-biplot method, only the environment effect is removed, and the total effects of genotype and genotype &#xd7; environment interaction are used to identify stable genotypes, and by presenting different biplot, ideal and stable environments and genotypes are introduced (<xref ref-type="bibr" rid="B88">Yan et&#xa0;al., 2007</xref>).</p>
<p>The variance analysis of the data in this study showed that the effects of genotype, environment, and genotype &#xd7; environment interaction were significant. The significant genotype &#xd7; environment interaction indicates the fluctuation of the grain yield of the genotypes from one environment to another (<xref ref-type="bibr" rid="B80">Thiam et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B9">Allaoui et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B68">Ruswandi et&#xa0;al., 2023</xref>). This means that the grain yield of the genotypes was affected by environmental conditions and produced different grain yields in different environments. The separation of the contribution of each factor also showed that genotype, environment, and genotype &#xd7; environment interaction justified 63.0%, 4.3%, and 29.7% of the total variation, respectively. Describing 30% of the total grain yield variation by genotype &#xd7; environment interaction makes the necessity of stability analysis and identification of stable genotypes unavoidable. The results of this study were consistent with the results of many researchers who reported the contribution of the effects of genotype and genotype &#xd7; environment interaction more than the environment effect (<xref ref-type="bibr" rid="B48">Hmwe et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B52">Katsenios et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B49">Hossain et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B84">Wodebo et&#xa0;al., 2023</xref>). On the other hand, some researchers also estimated the environmental effect is more than the effects of genotype and genotype &#xd7; environment interaction (<xref ref-type="bibr" rid="B8">Ali et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B83">Wardofa et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B80">Thiam et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B13">Al-Naggar et&#xa0;al., 2022</xref>).</p>
<p>The description of nearly 50% of the variance of the genotype &#xd7; environment interaction by the first component and nearly 71% of this variance by the first two components indicates the existence of a strong interaction between the studied genotypes and environments. <xref ref-type="bibr" rid="B78">Tekdal and Kendal (2018)</xref> also investigated the stability of 122 different durum wheat genotypes in two environments using the AMMI model, and they reported that genotype, environment, and genotype &#xd7; environment interaction explained 59.8%, 3.5%, and 36.7% of the data variation, respectively. Other researchers also reported a high percentage of the first and second principal components in the AMMI method (<xref ref-type="bibr" rid="B31">El-Sadek, 2017</xref>; <xref ref-type="bibr" rid="B8">Ali et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B9">Allaoui et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B49">Hossain et&#xa0;al., 2023</xref>). The studied environments were located far from the origin of the AMMI biplot, which indicated strong interaction forces with the genotype, and the angles between the studied environments (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) indicate the distinctiveness in the selection of genotypes (<xref ref-type="bibr" rid="B20">Balakrishnan et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B50">Jain et&#xa0;al., 2019</xref>). Therefore, using the values of the first principal component, the mean grain yield of the genotypes (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>), and the values of the first and second principal components (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>), the AMMI diagram was drawn to show the effects of genotypes and environments and the distribution of genotypes in the eight studied environments. The results showed that the genotypes located on the right side of the AMMI1 diagram (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>) had higher grain yield than the total mean. Among these genotypes, genotypes G16, G19, G17, and G35 produced the highest grain yield with 4977, 4901, 4418 and 4263 kg.ha<sup>-1</sup>, respectively. According to <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>, genotypes G25, G28, G31, G9, and G23 with Buin Zahra and Takestan environments in 2022 and 2023 (E1, E2, E3, and E4) and genotypes G34, G12, G14, and G5 with Kuhdasht and Poldokhtar environments in 2022 and 2023 (E5, E6, E7 and E8) were adaptable. <xref ref-type="bibr" rid="B80">Thiam et&#xa0;al. (2021)</xref> also identified the genotypes adapted to each environment using the graph obtained from the first two components in the AMMI model according to the proximity of the genotype to the environment vector. The difference in grain yield between Lorestan province (Kuhdasht and Poldokhtar) and Qazvin province (Takestan and Buin Zahra) can be attributed to several factors. Sparrow (<italic>Passer domesticus</italic>) infestation during the flowering and harvesting of quinoa had a greater impact on yield in Lorestan province due to the absence of fields or cover crops to deter sparrow attacks, while in Qazvin province, the cultivation of sunflowers alongside quinoa helped reduce the impact of sparrows. Additionally, the soil in Qazvin province was more suitable for quinoa cultivation, with a lighter texture compared to Lorestan province. Furthermore, high temperatures during flowering and physiological maturity in Lorestan province led to a decrease in the number of seeds and ultimately a decrease in grain yield.</p>
<p>The IPCA<sub>g</sub> index is one of the parameters that is calculated to determine the degree of interaction of each genotype with the environment and to identify stable genotypes in the AMMI method. Based on this, genotypes with a large IPCA<sub>g</sub>1 Score (positive or negative) have a high interaction with the environment, and on the contrary, genotypes with an IPCA<sub>g</sub>1 score close to zero have a low interaction and are stable genotypes (<xref ref-type="bibr" rid="B66">Purchase et&#xa0;al., 2000</xref>). Investigation of the IPCA<sub>g</sub>1 values showed that genotypes G15, G16, G18, G6, G12, G19, G11, G24, G26, and G4 were the most stable studied genotypes in this experiment with the lowest IPCA<sub>g</sub>1 score, respectively. The AMMI stability value (ASV) is another parameter of the AMMI method that expresses the variation between genotypes so that genotypes with less ASV and close to zero are considered stable (<xref ref-type="bibr" rid="B59">Mohammadi and Amri, 2008</xref>; <xref ref-type="bibr" rid="B53">Kebede and Getahun, 2017</xref>). The ASV index, like the IPCA<sub>g</sub>1 index, identifies similar and identical stable genotypes. Considering that genotypes must be introduced that have high grain yield in addition to stability and fewer yield fluctuations in different environments, the examination of the grain yield of these genotypes showed that only genotypes G16, G19, G35, G30, G39, G24, and G18 had higher grain yield than the population means. These genotypes were also placed at the origin of the AMMI biplot (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) and as a result, stable genotypes with high general adaptability were introduced.</p>
<p>The results of the GGE-biplot method also showed that the first two principal components, explained 68.1% and 15.2%, respectively, and in total about 83% of the variation of the genotype and genotype &#xd7; environment interaction. According to many researchers, the GGE-biplot method is one of the most appropriate methods to investigate the stability of genotypes (<xref ref-type="bibr" rid="B25">Chandrashekhar et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B45">Haile and Kebede, 2021</xref>; <xref ref-type="bibr" rid="B42">Greveniotis et&#xa0;al., 2023b</xref>) because in this method, by removing the environment effect as an uncontrollable source, the sum of the effects of genotype and the interaction of genotype &#xd7; environment are used, and as a result, the total controllable effects are used to study the response of genotypes and identify stable genotypes. Many researchers have reported the high contribution of the first principal component in explaining diversity of the genotype and genotype &#xd7; environment interaction in different plants, including quinoa (<xref ref-type="bibr" rid="B4">Afiah et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B80">Thiam et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B44">Hafeez et&#xa0;al., 2022</xref>), rice (<xref ref-type="bibr" rid="B47">Hasan et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B38">Ghazy et&#xa0;al., 2023</xref>), maize (<xref ref-type="bibr" rid="B72">Shojaei et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B61">Ninou et&#xa0;al., 2023</xref>), wheat (<xref ref-type="bibr" rid="B30">Elfanah et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B46">Han et&#xa0;al., 2024</xref>), barley (<xref ref-type="bibr" rid="B5">Akan et&#xa0;al., 2023</xref>) and sorghum (<xref ref-type="bibr" rid="B82">Wang et&#xa0;al., 2023</xref>) which was consistent with the results of this study.</p>
<p>Considering that about 83% of the variance of the genotype and genotype &#xd7; environment interaction in this study were described by the first and second components, therefore, different biplot diagrams can be drawn to study the distribution of genotypes in different environments and to choose the best genotypes and environments. One of these diagrams is the polygon biplot which is presented in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>, and it can be used to identify superior genotypes adapted to any environment (<xref ref-type="bibr" rid="B34">Gao et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B32">Esan et&#xa0;al., 2023</xref>). In this diagram, vertical lines are drawn from the origin of the biplot to each side of the polygon, and the studied genotypes and environments are divided into several sections so that the genotypes placed in each part of the polygon diagram have high specific adaptability with the environment of that part, especially the genotypes located at the vertices of the polygon, which have the highest specific adaptability with the respective environment (<xref ref-type="bibr" rid="B24">Bojtor et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B74">Sissoko et&#xa0;al., 2024</xref>). Based on the study, it was found that Poldokhtar was the most unfavorable environment for grain yield, while Takestan was the most favorable. Several genotypes were identified as superior in each environment, with some performing well in one region but not in another. This information can be valuable for selecting appropriate genotypes for different environmental conditions to optimize grain yield. In addition to the stable and high-yielding genotypes introduced in all locations, genotypes G7, G30, G33, and G34 can be introduced as superior genotypes in the Poldokhtar environment, which did not provide optimal yield in the Takestan environment. Also, genotypes G25, G31, and G39 had optimal grain yield in the Takestan environment, but produced low grain yield in the Poldokhtar environment.</p>
<p>Another diagram that is drawn in the GGE-biplot method is the biplot diagram to investigate the relationships between the studied environments. The cosine of the angle between the environment vectors in this diagram shows the correlation between environments. A zero-degree angle means +1 correlation, a 90-degree angle means no correlation, an acute angle means positive correlation and an obtuse angle means negative correlation (<xref ref-type="bibr" rid="B89">Yan and Tinker, 2006</xref>). In addition, based on the length of the environment vectors in this diagram, the studied environments can also be examined in terms of the power of distinguishing genotypes, so that the environments with a longer vector length have more power and the ability to differentiate (<xref ref-type="bibr" rid="B32">Esan et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B54">Kebede et&#xa0;al., 2023</xref>). Correlation between the eight studied environments in this experiment showed that the angle between the vector of Buin Zahra and Takestan environments in both cropping years (E1, E2, E3, and E4) and Kuhdasht and Poldokhtar in both cropping years (E5, E6, E7, and E8) is smaller, which means that these environments are more similar to each other and there is a high correlation between them, while the angle between the environment vectors of Buin Zahra and Takestan with the vectors of Kuhdasht and Poldokhtar environments in both cropping years (E1, E2, E3, and E4 with E1, E2, E3, and E4) is larger and indicates the greater difference between these environments and less correlation between them. Considering that the information obtained from environments with high correlation is similar and identical, therefore, to increase the efficiency of the experiments, one of the environments with high correlation can be selected and future experiments can be performed in this environment and eliminate other environments and finally reduce the costs of performing experiments (<xref ref-type="bibr" rid="B71">Sharma et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B51">Karuniawan et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B69">Ruswandi et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B76">Taleghani et&#xa0;al., 2023</xref>). The investigation of the length vector of the environment also showed that all the eight studied environments in this experiment had large length vectors, which meant a high discrimination power in all the experiment environments, However, the vector length of Takestan and Buin Zahra environments in 2023 (E2 and E4) was more than the other six environments, which indicated the greater impact of these environments in differentiating genotypes compared to other studied environments (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). In other words, Takestan and Buin Zahra environments in 2023 (E2 and E4) had a greater contribution to the formation of the genotype &#xd7; environment interaction than the other six environments. Therefore, the length of the environment vectors is a measure to determine the stability of environments and there is an inverse relationship between them, so that an environment with a smaller environment vector size is more stable (<xref ref-type="bibr" rid="B32">Esan et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B54">Kebede et&#xa0;al., 2023</xref>). Taking into account that the length of the vectors of the Kuhdasht environment in both cropping years (E5 and E6) was smaller than the vectors of other environments, these environments had higher stability and the grain yield fluctuation of quinoa genotypes in these environments was less than in other environments. This environment can be used for planning to select superior quinoa genotypes (<xref ref-type="bibr" rid="B16">Ansarifard et&#xa0;al., 2020</xref>).</p>
<p>Another diagram drawn in the GGE-biplot method is the Biplot diagram to compare genotypes with the ideal genotype. Based on this diagram, the genotypes are ranked and placed in concentric circles, and the genotypes placed in the center of these concentric circles are known as the ideal genotypes. In addition, the distance from the Average Environment Axis (AEA) is also an indicator to determine the stability of genotypes and has an inverse relationship with stability (<xref ref-type="bibr" rid="B54">Kebede et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B61">Ninou et&#xa0;al., 2023</xref>). The unique feature of the GGE-biplot is that it allows the comparison of genotypes with the ideal genotype. Examining the &#x2018;Mean vs. stability&#x2019; pattern (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>) showed that the genotypes G16, G19, G17, G35, and G31 were placed in the center of the concentric circles, and in contrast, the genotypes G40, G4, G21, G27, G36, G38, and G32 were located farther away from the concentric circles. Genotypes G16, G19 and G17 had the highest mean and genotypes G40, G4, and G21 had the lowest mean in the environment. According to this figure, genotypes G16, G19, and G17 were recognized as ideal genotypes in this study. Following this, genotypes G35 and, G31 were identified as superior and stable genotypes. Finally, using <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>., ideal environments were identified. In this diagram, the smaller the angle of the environment vector with the Average Environment Axis (AEA) and the intended environment placed in concentric circles, the more ideal that environment is (<xref ref-type="bibr" rid="B90">Ye et&#xa0;al., 2019</xref>). Therefore, the Takestan environment in 2022 (E3) and then the Kuhdasht environments in 2022 and 2023 (E5 and E6) were recognized as ideal environments for cultivating the studied quinoa genotypes. <xref ref-type="bibr" rid="B13">Al-Naggar et&#xa0;al. (2022)</xref> also introduced ideal genotypes and ideal fertilizer environments for quinoa cultivation by evaluating 37 quinoa genotypes using this biplot. These environments can be used to improve quinoa genotypes because they consistently produce the highest grain yield. GGE-biplot diagrams allow the evaluation of environments and genotypes based on the power of differentiation and representation, so this method is more favorable than the AMMI method (<xref ref-type="bibr" rid="B6">Akta&#x15f;, 2016</xref>).</p>
</sec>
<sec id="s5" sec-type="conclusion">
<label>5</label>
<title>Conclusion</title>
<p>In this study, genotype &#xd7; environment interaction and grain yield stability were investigated in 40 quinoa genotypes using AMMI and GGE-biplot methods. The variance analysis of the data in this study showed that the effects of genotype, environment, and genotype &#xd7; environment interaction were significant. The significant genotype &#xd7; environment interaction indicates the fluctuation of grain yield of genotypes from one environment to another due to the variation in climatic and edaphic factors. The breakdown of the contribution of each factor reveals that genotype accounts for 63.0% of the total variation, environment for 4.3%, and genotype &#xd7; environment interaction for 29.7%. The fact that genotype &#xd7; environment interaction explains 30% of the total grain yield variation underscores the importance of conducting stability analysis and identifying stable genotypes. The results of AMMI analysis showed that the six principal components explained of the variance of genotype &#xd7; environment interaction. The description of nearly 50% of the variance of the genotype &#xd7; environment interaction by the first component and nearly 71% of this variance by the first two components indicates the existence of a strong interaction between the studied genotypes and environments. Among the genotypes studied, genotypes G16, G19, G17, and G35 had the highest grain yield with 4977, 4901, 4418, and 4263 kg/ha respectively. Also, various statistical analyses showed that Pol Dokhtar was the most unfavorable and Takestan was the most favorable environment for grain yield. Based on AMMI graphs, genotypes G25, G28, G31, G9, and G23 were adaptable to the environments of Buin Zahra and Takestan, and genotypes G34, G12, G14, and G5 were adaptable to the environments of Kohdasht and Pol Dokhtar. The results of the GGE-biplot method also showed that the first two principal components, explained about 83% of the variation of the genotype and genotype &#xd7; environment interaction. The polygon diagram (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>) separated the environments studied in this experiment into two mega-environments. The first mega-environment included the environments of Buin Zahra and Takestan, while the environments of Kuhdasht and Poldokhtar were placed in the second mega-environment. Among the studied genotypes, genotypes G16, G19, and G25 had the highest specific adaptability with the first mega-environment, and genotype G17 with the second mega-environment. The grain yield analysis of 40 studied quinoa genotypes in this experiment with both AMMI and GGE-biplot analysis methods identified genotypes G16 and G19 as stable and high-yielding genotypes. Also, both AMMI and GGE-biplot methods were beneficial in studying genotype &#xd7; environment interaction and identifying stable and high-yielding genotypes. However, the GGE-biplot method, due to presenting different graphs, determining mega-environments, and identifying ideal genotypes, was a more useful tool for stability analysis. High-yielding and stable genotypes identified in this experiment can be introduced as suitable cultivars for the studied environments.</p>
</sec>
</body>
<back>
<sec id="s6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>VJ: Conceptualization, Data curation, Formal analysis, Methodology, Project administration, Resources, Software, Visualization, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. BR: Conceptualization, Data curation, Funding acquisition, Software, Supervision, Validation, Visualization, Writing &#x2013; review &amp; editing. ESL: Conceptualization, Data curation, Formal analysis, Investigation, Resources, Supervision, Validation, Visualization, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. AB: Data curation, Formal analysis, Resources, Software, Visualization, Writing &#x2013; review &amp; editing.</p>
</sec>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This research was funded by the University of Guilan with Grant No. 1635237154.</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>This research was supported by the University of Guilan, Iran. The seeds of all quinoa genotypes were obtained from the IPK Gene Bank, Leibniz Institute of Plant Genetics and Crop Plant Research, Germany.</p>
</ack>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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