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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2024.1349064</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Hexosamine biosynthesis and related pathways, protein N-glycosylation and O-GlcNAcylation: their interconnection and role in plants</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Ya-Huei</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1745305"/>
<role content-type="https://credit.niso.org/contributor-roles/data-curation/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Cheng</surname>
<given-names>Wan-Hsing</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/379899"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/funding-acquisition/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
</contrib-group>
<aff id="aff1">
<institution>Institute of Plant and Microbial Biology, Academia Sinica</institution>, <addr-line>Taipei</addr-line>, <country>Taiwan</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Muthusamy Ramakrishnan, Nanjing Forestry University, China</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Maksym Danchenko, Slovak Academy of Sciences, Slovakia</p>
<p>Wei Zeng, Zhejiang Agriculture and Forestry University, China</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Wan-Hsing Cheng, <email xlink:href="mailto:whcheng@gate.sinica.edu.tw">whcheng@gate.sinica.edu.tw</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>06</day>
<month>03</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>15</volume>
<elocation-id>1349064</elocation-id>
<history>
<date date-type="received">
<day>04</day>
<month>12</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>05</day>
<month>02</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 Chen and Cheng</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Chen and Cheng</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>N-Acetylglucosamine (GlcNAc), a fundamental amino sugar moiety, is essential for protein glycosylation, glycolipid, GPI-anchor protein, and cell wall components. Uridine diphosphate-GlcNAc (UDP-GlcNAc), an active form of GlcNAc, is synthesized through the hexosamine biosynthesis pathway (HBP). Although HBP is highly conserved across organisms, the enzymes involved perform subtly distinct functions among microbes, mammals, and plants. A complete block of HBP normally causes lethality in any life form, reflecting the pivotal role of HBP in the normal growth and development of organisms. Although HBP is mainly composed of four biochemical reactions, HBP is exquisitely regulated to maintain the homeostasis of UDP-GlcNAc content. As HBP utilizes substrates including fructose-6-P, glutamine, acetyl-CoA, and UTP, endogenous nutrient/energy metabolites may be integrated to better suit internal growth and development, and external environmental stimuli. Although the genes encoding HBP enzymes are well characterized in microbes and mammals, they were less understood in higher plants in the past. As the HBP-related genes/enzymes have largely been characterized in higher plants in recent years, in this review we update the latest advances in the functions of the HBP-related genes in higher plants. In addition, HBP&#x2019;s salvage pathway and GlcNAc-mediated two major co- or post-translational modifications, N-glycosylation and O-GlcNAcylation, are also included in this review. Further knowledge on the function of HBP and its product conjugates, and the mechanisms underlying their response to deleterious environments might provide an alternative strategy for agricultural biofortification in the future.</p>
</abstract>
<kwd-group>
<kwd>N-acetylglucosamine</kwd>
<kwd>hexosamine biosynthesis pathway</kwd>
<kwd>salvage pathway</kwd>
<kwd>N-glycosylation</kwd>
<kwd>O-GlcNAcylation</kwd>
<kwd>abiotic stress</kwd>
</kwd-group>
<counts>
<fig-count count="3"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="144"/>
<page-count count="15"/>
<word-count count="8894"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Plant Abiotic Stress</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>Plants, as sessile organisms, frequently suffer from deleterious environmental stimuli. Many cellular metabolic processes, such as carbohydrates, amino acids, lipids, and energy metabolism, are influenced by different developmental stages and abiotic stresses (<xref ref-type="bibr" rid="B114">Van Zelm et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B70">Mansour and Hassan, 2022</xref>). In response to developmental changes and external challenges, plants have evolved sophisticated mechanisms to better suit plant growth and environmental changes by integrating their internal metabolic status and optimizing metabolic reprogramming. One of these metabolic processes is the so-called hexosamine biosynthesis pathway (HBP), which utilizes fructose-6-phosphate (Fru-6-P), glutamine, acetyl-coenzyme A (acetyl-CoA), and uridine triphosphate (UTP) as substrates to synthesize uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). As the metabolic flux through HBP integrates glycolysis, amino acid, lipid, and nucleic acid pathways to maintain their balance and keep UDP-GlcNAc homeostasis, HBP may function as a metabolic integrator or hub for sensing nutrients (<xref ref-type="bibr" rid="B13">Buse, 2006</xref>; <xref ref-type="bibr" rid="B18">Chiaradonna et&#xa0;al., 2018</xref>) to link cellular nutrients/or energy signals and external cues. The HBP flux that generates UDP-GlcNAc is primarily regulated by the rate-limiting enzyme glutamine:fructose-6-phosphate amidotransferase (GFAT) activity and the obligatory substrate of O-linked GlcNAc transferase (OGT). The increased flux through HBP might be linked to insulin resistance, the vascular complications of diabetes, and cancer formation in mammals (<xref ref-type="bibr" rid="B13">Buse, 2006</xref>; <xref ref-type="bibr" rid="B18">Chiaradonna et&#xa0;al., 2018</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>UDP-GlcNAc biosynthesis through hexosamine biosynthesis and salvage pathways. <bold>(A)</bold> Hexosamine biosynthesis and salvage pathways. The hexosamine biosynthesis pathway (HBP) is composed of four reactions catalyzed sequentially by glutamine:Fru-6-P amidotransferase (GFAT), glucosamine-6-P N-acetyltransferase (GNA), N-acetylglucosamine-phosphate mutase (AGM) and N-acetylglucosamine-1-P uridylyltransferase (GlcNAc1pUT or UAP) to synthesize uridine diphosphate N-acetylglucosamine (UDP-GlcNAc). UDP-GlcNAc is presumably interconverted to UDP-N-acetylgalactosamine (UDP-GalNAc) by an uncharacterized UDP-Glc-4-epimerase (UGE) in plants. In the salvage pathway (purple lines), GlcN is used and converted to GlcN-6-P catalyzed by a hexokinase (HK), followed by entering HBP to form UDP-GlcNAc. In addition, GlcNAc can be converted to GlcNAc-6-P catalyzed by an N-acetylglucosamine kinase (GNK); GlcNAc-6-P further enters the HBP to form UDP-GlcNAc. The green dashed lines represent HBP in prokaryotes. This HBP diagram is modified from <xref ref-type="bibr" rid="B27">Furo et&#xa0;al. (2015)</xref> and <xref ref-type="bibr" rid="B16">Chen et&#xa0;al. (2022)</xref>. <bold>(B)</bold> Biochemical structures of HBP. These chemical structures are derived from the BRENDA database (<ext-link ext-link-type="uri" xlink:href="https://www.brenda-enzymes.org/fulltext.php?overall=1">https://www.brenda-enzymes.org/fulltext.php?overall=1</ext-link>).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1349064-g001.tif"/>
</fig>
<p>UDP-GlcNAc, the active form of GlcNAc, is a fundamental amino sugar moiety essential for the glycosylation of proteins and lipids (<xref ref-type="bibr" rid="B23">Ebert et&#xa0;al., 2018</xref>), glycosylphosphatidylinositol (GPI)-anchor proteins (<xref ref-type="bibr" rid="B58">Lalanne et&#xa0;al., 2004</xref>), a cell wall component of chitin in yeast, and an exoskeleton of arthropods (<xref ref-type="bibr" rid="B69">Maia, 1994</xref>; <xref ref-type="bibr" rid="B53">Kato et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B3">Arakane et&#xa0;al., 2011</xref>). UDP-GlcNAc is synthesized through an HBP that involves four consecutive reactions orderly catalyzed by a GFAT (<xref ref-type="bibr" rid="B39">Hassid et&#xa0;al., 1959</xref>; <xref ref-type="bibr" rid="B22">Durand et&#xa0;al., 2008</xref>), a glucosamine-6-P N-acetyltransferase (GNA) (<xref ref-type="bibr" rid="B116">Vetting et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B122">Wang et&#xa0;al., 2008a</xref>), an N-acetylglucosamine-phosphate mutase (AGM)/or phosphoacetylglucosamine mutase (<xref ref-type="bibr" rid="B77">Mio et&#xa0;al., 2000</xref>), and an N-acetylglucosmine-1-P-uridylyltransferase (GlcNAc1pUT, <xref ref-type="bibr" rid="B138">Yang et&#xa0;al., 2010</xref>) or a UDP-N-acetylglucosamine pyrophosphorylase (UAP; <xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>, <xref ref-type="bibr" rid="B125">Wang et&#xa0;al., 2021</xref>). These processes are essential for cell growth and stress response and are conserved across organisms (<xref ref-type="bibr" rid="B73">Milewski et&#xa0;al., 2006</xref>). Dysfunction of HBP enzymes frequently causes severe phenotypes (<xref ref-type="bibr" rid="B97">Schimmelpfeng et&#xa0;al., 2006</xref>); moreover, a complete block of HBP normally results in lethality in yeast, mammals, and plants (<xref ref-type="bibr" rid="B73">Milewski et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B89">Pantaleon, 2015</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>).</p>
<p>In the past, the function and regulation of HBP have been more intensively studied in microbes and mammals than in plants. The application of HBP products or intermediates through dietary treatment has been proposed as a therapy for human genetic disorders (<xref ref-type="bibr" rid="B87">Paneque et&#xa0;al., 2023</xref>). Elegant reviews have been recently reported on the function and regulation of HBP, which are primarily stressed in microbes (<xref ref-type="bibr" rid="B132">Wyllie et&#xa0;al., 2022</xref>) and eukaryotes of mammals (<xref ref-type="bibr" rid="B87">Paneque et&#xa0;al., 2023</xref>); however, an overview of HBP functions in plants is lacking. As research progress has greatly advanced in plant HBP study in recent years, in this review, we update our current knowledge of HBP function in plants and its stress responses. In addition, we provide an overview of the salvage pathway of HBP and the targets of UDP-GlcNAc in two major co- or post-translational modifications, N-linked glycosylation (N-glycosylation) and O-linked &#x3b2;-N-acetylglucosamine (O-GlcNAcylation). Further knowledge of HBP function and its response to abiotic stress may provide an alternative strategy to manipulate plant growth and tolerance to abiotic stress.</p>
</sec>
<sec id="s2">
<label>2</label>
<title>Hexosamine biosynthesis pathway enzymes</title>
<sec id="s2_1">
<label>2.1</label>
<title>L-glutamine:D-fructose-6-phosphate amidotransferase</title>
<p>The first committed step of HBP is the transamination of D-fructose-6-phosphate from L-glutamine to form <sc>D</sc>-glucoamine-6-phosphate and <sc>L</sc>-glutamate, catalyzed by an L-glutamine:D-fructose-6-phosphate amidotransferase (GFAT; EC2.6.1.16) (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>), also known as glucosamine-6-phosphate synthase (GlcN6P synthase). GFAT acts as the rate-limiting enzyme in the <italic>de novo</italic> HBP in fungi and animals (<xref ref-type="bibr" rid="B85">Olchowy et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B120">Walter et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B87">Paneque et&#xa0;al., 2023</xref>). Based on its origins in prokaryotes and lower or higher eukaryotes, the GFAT-encoded gene has been termed <italic>Glms</italic>, <italic>GFA</italic>, or <italic>GFAT</italic> (<xref ref-type="bibr" rid="B22">Durand et&#xa0;al., 2008</xref>). The function of GFAT is conserved among organisms, including microorganisms, mammals, and plants (<xref ref-type="bibr" rid="B73">Milewski et&#xa0;al., 2006</xref>). Yeast GFA1 activity is inhibited by UDP-GlcNAc and this inhibition is noncompetitive. In the pathogenic yeast <italic>Candida albicans</italic>, GFA activity increases during the yeast-to-mycelium morphological transformation, ensuring that UDP-GlcNAc production is increased when more amino sugars are needed in mycelium cells (<xref ref-type="bibr" rid="B74">Milewski et&#xa0;al., 1999</xref>, <xref ref-type="bibr" rid="B73">Milewski et&#xa0;al., 2006</xref>). GFA1 is the primary target molecule of methylmercury in <italic>Saccharomyces cerevisiae</italic> and yeast cells overexpressing <italic>GFA1</italic> confer resistance to methylmercury, an important environmental pollutant that causes neurological toxicity in mammals (<xref ref-type="bibr" rid="B78">Miura et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B81">Naganuma et&#xa0;al., 2000</xref>).</p>
<p>In plants, GFAT activity was first described by <xref ref-type="bibr" rid="B39">Hassid et&#xa0;al. (1959)</xref>, and GFAT activity from mung bean <italic>Phaseolus aureus</italic> was partially purified and characterized (<xref ref-type="bibr" rid="B115">Vessal and Hassid, 1972</xref>). The Arabidopsis genome only contains a single copy of the <italic>GFAT</italic> gene (At3g24090), termed <italic>GFAT1</italic>, and its expression is primarily restricted to mature pollen grains (<xref ref-type="bibr" rid="B127">Wang et&#xa0;al., 2008b</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>). Nevertheless, Arabidopsis <italic>GFAT1</italic> transcripts are also detectable in roots, flowers, and siliques by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>). The loss-of-function <italic>AtGFAT1</italic> displays defects in a polar deposition of pectin and callose in the pollen wall, leading to inactivation of pollen activity; thus, the knockout mutant <italic>Atgfat1-2</italic> is lethal. In contrast, the knockdown mutant <italic>Atgfat1</italic> or <italic>GFAT1</italic> RNAi lines show reductions in glucosamine (GlcN) and UDP-GlcNAc levels in association with the reduced protein N-glycosylation but increased sensitivity of tunicamycin, an ER stress inducer agent. The RNAi lines also impair vegetative and reproductive development and display partial sterility. The abnormal phenotypes observed in <italic>Atgfat1</italic> can be largely rescued by the exogenous application of GlcN (<xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>). It was reported that GlcN inhibits Arabidopsis hypocotyl elongation due to the induction of reactive oxygen species (ROS). Arabidopsis transgenic plants overexpress <italic>E. coli glucosamine-6-phosphate deaminase</italic> (<italic>NagB</italic>) to scavenge endogenous GlcN and confer tolerance to oxidative, drought, and cold stresses. Moreover, overexpression of <italic>E. coli GlmS</italic> in <italic>Arabidopsis</italic> promotes cell death at an early stage (<xref ref-type="bibr" rid="B19">Chu et&#xa0;al., 2010</xref>).</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>D-Glucosamine-6-phosphate N-acetyltransferase</title>
<p>The second enzyme in the HBP pathway is D-Glucosamine-6-phosphate N-acetyltransferase (GNA; EC 2.3.1.4), which converts GlcN-6-phosphate and acetyl-CoA to N-acetylglucosamine-6-phosphate (GlcNAc-6P) and CoA (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). GNA is a single-copy gene in the genome of most characterized organisms characterized. For example, the yeast <italic>S. cerevisiae</italic> gene (<italic>YFL017C</italic>) was demonstrated to exhibit GNA activity and is thus designated as <italic>ScGNA1</italic> (<xref ref-type="bibr" rid="B76">Mio et&#xa0;al., 1999</xref>). Additionally, the Arabidopsis genome also contains one <italic>GNA</italic> (<italic>AtGNA</italic>, At5g15770), the expression of which is ubiquitous in all organs (<xref ref-type="bibr" rid="B95">Riegler et&#xa0;al., 2012</xref>) and shows a slightly diurnal expression pattern (<xref ref-type="bibr" rid="B113">Usadel et&#xa0;al., 2008</xref>). In contrast to <italic>Arabidopsis</italic>, rice possesses two <italic>GNA</italic>s, including <italic>OsGNA1</italic> (LOC_Os09g31310) and <italic>OsGNA</italic> (LOC_Os02g48650). <italic>OsGNA1</italic> is highly expressed in root tissues (<xref ref-type="bibr" rid="B47">Jiang et&#xa0;al., 2005</xref>) but <italic>OsGNA</italic> is less characterized (<xref ref-type="bibr" rid="B95">Riegler et&#xa0;al., 2012</xref>) and has low expression levels in all tissues as revealed by the rice eFP browser (<xref ref-type="bibr" rid="B45">Jain et&#xa0;al., 2007</xref>). Based on the transient expression of the AtGNA-GFP fused protein in Arabidopsis protoplasts, its subcellular localization is primarily in the endoplasmic reticulum (ER) (<xref ref-type="bibr" rid="B95">Riegler et&#xa0;al., 2012</xref>), This result supports the role of UDP-GlcNAc, the end product of the HBP pathway, in protein glycosylation and synthesis of the GPI anchor in the ER. It was observed that deletion of yeast <italic>ScGNA1</italic> or <italic>AfGNA1</italic> and the loss-of-function of <italic>AtGNA</italic> by a T-DNA insertion (<italic>AtGNA1-2</italic> and <italic>AtGNA1-3</italic>), resulting in a complete block of GlcNAc production, is lethal (<xref ref-type="bibr" rid="B76">Mio et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B95">Riegler et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B65">Lockhart et&#xa0;al., 2020</xref>); this phenotype is similar to that obtained for the knockout mutants of <italic>Arabidopsis</italic> in GFAT, phospho-N-acetylglucosamine mutase or the double mutant <italic>glcnac.ut1/glcnac.ut2</italic> (<xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>). This result also reflects the vital role of UDP-GlcNAc in plant growth. Although AtGNA has a low protein sequence identity to <italic>Homo sapiens</italic> HsGNA (~39.1%) and <italic>S. cerevisiae</italic> ScGNA (~35.0%), this protein crystal structure at 1.5 &#xc5; resolution exhibited very high structural similarity to these two orthologs (<xref ref-type="bibr" rid="B95">Riegler et&#xa0;al., 2012</xref>).</p>
<p>An EMS-mutagenized missense mutation in Arabidopsis <italic>GNA</italic>, known as <italic>lignescens</italic> (<italic>lig</italic>), causes plant growth defects and ectopic lignin accumulation under high temperature (28&#xb0;C) conditions. Compared to the wild type, the <italic>lig</italic> mutant plants exhibit lower levels of UDP-GlcNAc than the wild type, accompanied by defects in N-linked protein glycosylation, ER stress, and unfolded protein response (UPR). Supporting evidence reveals the upregulation of <italic>BiP3</italic> expression, an ER stress marker, under high-temperature conditions and treatments with the ER stress-inducing agents, tunicamycin, and DTT, resulting in plants with phenotypes that mimic the <italic>lig</italic> mutant. Moreover, exogenous application of UDP-GlcNAc, GlcNAc, or GalNAc rescues the high-temperature sensitivity and ectopic accumulation of lignin observed in the <italic>gna</italic>/<italic>lig</italic> mutants. Thus, dysfunction of GNA causes a high-temperature-dependent defect in UDP-GlcNAc biosynthesis, which further affects N-linked protein glycosylation and lignin accumulation, mostly through the UPR (<xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>).</p>
<p>The function of rice OsGNA1 was also reported by <xref ref-type="bibr" rid="B47">Jiang et&#xa0;al. (2005)</xref>. <italic>Osgna1</italic> is a T-DNA insertion mutant that shows lower levels of UDP-GlcNAc and defects in N-linked protein glycosylation, as well as a reduction in O-linked glycosylation activity. The short-root phenotype of <italic>Osgna1</italic> is temperature-sensitive, particularly at 25&#xb0;C, which can be largely rescued by a high temperature of 32&#xb0;C. This low temperature-sensitive response in rice may be opposite to that of the Arabidopsis <italic>Atgna</italic> mutant, which shows greater sensitivity to high temperature. This discrepancy remains to be investigated in the future. These short roots observed in <italic>Osgna1</italic> are linked to defects in mitochondrial dehydrogenase activity, root viability, cell shape, and microtubule stability. The latter may result from a defect in O-linked glycosylation of microtubule-associated proteins (<xref ref-type="bibr" rid="B47">Jiang et&#xa0;al., 2005</xref>).</p>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>N-acetylglucosamine-phosphate mutase/phosphoacetylglucosamine mutase</title>
<p>N-acetylglucosamine-phosphate mutase (AGM; EC 5.4.2.3) or phosphoacetylglucosamine mutase catalyzes the isomerization of N-acetylglucosamine-6-P (GlcNAc-6-P) into N-acetylglucosamine-1-P (GlcNAc-1-P) (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). The growth of the yeast <italic>ScAGM</italic> deletion mutant (<italic>Scagm</italic>) cannot progress through five cell cycles. Overexpression of <italic>ScAGM</italic> may complement the growth defect of a phosphoglucomutase (PGM) double deletion mutant (<italic>pgm1</italic>/<italic>pgm2</italic>); however, overexpression of <italic>ScPGM2</italic>, a major <italic>PGM</italic>, cannot restore the growth of <italic>Scagm1</italic> deletion mutant cells. These data suggested that the different hexosephosphate mutases of <italic>S. cerevisiae</italic> share partially overlapping substrate specificities but they have distinct physiological functions (<xref ref-type="bibr" rid="B42">Hofmann et&#xa0;al., 1994</xref>). In mice, severely reduced AGM1/PGM3 activity causes lethality during embryonic development, whereas mutated mice with partial AGM1/PGM3 activity do not perish but display severe syndromes, such as sterility (<xref ref-type="bibr" rid="B33">Greig et&#xa0;al., 2007</xref>). Human patients with mutations in <italic>PGM3</italic>/<italic>AGM1</italic> will die in early infancy or have congenital immune system defects, developmental delays, and neurocognitive disorders (<xref ref-type="bibr" rid="B7">Ben-Khemis et&#xa0;al., 2017</xref>).</p>
<p>The Arabidopsis <italic>AGM</italic> gene (At5g18070) was first identified by selecting for complementation of <italic>Escherichia coli</italic> UV-sensitive mutants, and the identified gene was termed <italic>DNA-DAMAGE-REPAIR/TOLERANCE 101</italic> (<italic>DRT101</italic>). The N-terminus of AGM/DRT101 contains an amino acid region similar to the chloroplast transit peptide, suggesting its possible subcellular localization in chloroplasts (<xref ref-type="bibr" rid="B88">Pang et&#xa0;al., 1993</xref>). Arabidopsis AGM shares 38 to 44% amino acid identity with <italic>Homo sapiens</italic>, <italic>S. cerevisiae</italic>, and <italic>Aspergillus fumigatus</italic>, and their protein structures are highly conserved. Although two members of the Arabidopsis &#x3b1;-D-phosphoglucosamine mutase family, At5g17530 and At1g70820, are phylogenetically similar to AtAGM, only AtAGM functions in the isomerization of GlcNAc-1-P and GlcNAc-6-P. AtAGM has promiscuous substrates and catalyzes the interconversion of GlcNAc-1-P and GlcNAc-6-P and Glc-1-P and Glc-6-P; the catalytic reaction by AtAGM requires divalent cations, such as Mg<sup>2+</sup> or Mn<sup>2+</sup> (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>).</p>
<p>Based on the RT-qPCR analyses, <italic>AtAGM</italic> is highly expressesed in the roots, flowers, and siliques, similar to the <italic>AtGFAT</italic> expression pattern. Moreover, unlike other HBP enzymes present in the cytosol or ER membrane surface, overexpression of the <italic>35S::AGM-GFP</italic> transgene in the <italic>Atagm</italic> background, i.e., <italic>Atagm</italic>-OE, reveals AtAGM localization in the cytosol, cytomembrane, chloroplasts, and mitochondria (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>).</p>
<p>Similar to other HBP mutants, the homozygous knockout mutants, such as <italic>Atagm2</italic> (SAIL_187_F01) are lethal; however, the knockdown mutants, <italic>Atagm1</italic> (SALK_039132C) and <italic>Atagm2</italic> (+/-) can survive. The expression of the <italic>AtAGM</italic> gene in both <italic>Atagm1</italic> and <italic>Atagm2</italic> (+/-) is greatly reduced, and these mutants show a ~40% reduction in UDP-GlcNAc content compared to wild-type plants. Interestingly, overexpression of <italic>AtAGM</italic> in the <italic>Atagm</italic> background, i.e., <italic>Atagm</italic>-OE, does not increase UDP-GlcNAc contents; this likely results from feedback inhibition of UDP-GlcNAc, which affects the glutaminase function of GFAT (<xref ref-type="bibr" rid="B85">Olchowy et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B119">Walter et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>). Thus, exogenous tunicamycin impairs UDP-GlcNAc inhibition and enhances AtGFAT activity, leading to increasingly higher levels of UDP-GlcNAc in <italic>Atagm</italic>-OE plants than in the wild-type plants (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>). Thus, HBP is exquisitely regulated to maintain UDP-GlcNAc homeostasis, which plays a critical role in normal plant growth and development. Although these knockdown mutants display no conceivable phenotype, they show more vigorous growth than the wild type and <italic>Atagm</italic>-OE at maturity under normal growth conditions. This vigorous growth observed in the mutants presumably results from high chlorophyll contents that enhance photosynthetic capability. Moreover, these mutants show temperature-dependent (28&#xb0;C) growth defects, including short roots and germination delay. Temperature-sensitive phenotypes can be abolished by exogenous UDP-GlcNAc (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>). These data suggest that a small amount of UDP-GlcNAc is sufficient for normal plant growth, which is also observed in mouse embryonic fibroblasts (<xref ref-type="bibr" rid="B10">Boehmelt et&#xa0;al., 2000</xref>). However, plants need more UDP-GlcNAc when adapting to abiotic stress, and the mutant plants, such as <italic>Atagm1</italic> and <italic>Atagm2</italic> (+/-), cannot produce adequate UDP-GlcNAc under deleterious environments, leading to stress-induced growth defects.</p>
<p>Total protein blots stained with concanavalin A (ConA) lectin revealed that glycoproteins show no significant difference, whereas the N-glycan composition varies among wild type, <italic>Atagm2</italic> (+/-), and <italic>Atagm</italic>-OE. Moreover, an obvious impairment of O-GlcNAcylation is observed in the <italic>Atagm</italic> mutants. The temperature-sensitive growth defects are primarily linked to the impairment of protein O-GlcNAcylation but not N-glycosylation because the O-GlcNAcylation deficient mutants <italic>Atsec</italic>s, in which O-GlcNAc transferase (OGT, <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) is defective, also display temperature-sensitive phenotypes; however, no significant phenotype was observed in the N-glycosylation deficient mutant <italic>Atstt3a</italic>, in which oligosaccharyltransferase (OST, <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) is defective (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Schematic diagram of N-glycosylation and O-GlcNAcylation. GlcNAc is the fundamental amino sugar moiety essential for N-glycosylation and GlcNAcylation. <bold>(A)</bold> N-glycosylation. UDP-GlcNAc is generated by the hexosamine biosynthesis pathway (HBP) and provides GlcNAc for the initial biosynthesis of oligosaccharide precursors at the cytosolic side of the ER. The oligosaccharide precursor (Man5GlcNAc2-PP-Dol) enters the ER lumen for N-glycan modification and N-glycosylation of proteins. Complex and hybrid N-glycan processing occurs in the Golgi apparatus. Proteins with mature N-glycans will be secreted to their destinations. <bold>(B)</bold> O-GlcNAcylation. UDP-GlcNAc also provides the GlcNAc molecular unit directly to the Ser/Thr amino acids of proteins localized in the cytosol and nucleus. (1) Asparagine-linked glycosylation (ALG) enzyme ALG7, a UDP-N-acetylglucosamine:dolichol phosphate N-acetylglucosamine-1-P transferase; (2) ALG13 and ALG14, UDP-N-acetylglucosamine transferase subunits; (3) ALG1/2/11, mannosyltransferases; (4) Flippase-like protein; (5) ALG3/9/12, mannosyltransferases; (6) ALG6/8/10, glucosyltransferases; (7) OST, oligosaccharyltransferase complex; (8) GCSI/II, glucosidases; (9) MNS3, ER-&#x3b1;-mannosidase I; (10) MNS1/2, Golgi-&#x3b1;-mannosidase I; (11) GnTI, &#x3b2;-(1-&gt;2)-N-acetylglucosaminyltransferase I or COMPLEX GLYCAN LESS 1 (CGL1); (12) GMII, Golgi &#x3b1;-mannosidase II; (13) GnTII, &#x3b2;-(1-&gt;2)-N-acetylglucosaminyltransferase II; (14) XYLT, &#x3b2;-(1-&gt;2)-xylosyltransferase; FUT11/12, core &#x3b1;-(1-&gt;3)-fucosyltransferases; GALT1, &#x3b2;-(1-&gt;3)-galactosyltransferase 1; FUT13, &#x3b1;-(1-&gt;4)-fucosyltransferase; (15) SEC, SECRET AGENT (O-GlcNAc transferase, OGT); ROCK1, REPRESSOR OF CYTOKININ DEFICIENCY 1; UGNT1, UDP-GlcNAc transporter; NOPE1, NO PERCEPTION 1. The nomenclature of enzymes is generally based on the report by <xref ref-type="bibr" rid="B106">Strasser et&#xa0;al. (2021)</xref>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1349064-g002.tif"/>
</fig>
</sec>
<sec id="s2_4">
<label>2.4</label>
<title>N-acetylglucosamine-1-P uridylyltransferase/or UDP-N-acetlyglucosamine-1-P pyrophosphorylase</title>
<p>The last reaction of HBP is the uridylation of GlcNAc-1-P into UDP-GlcNAc by N-acetylglucosamine-1-P uridylyltransferase (GlcNAc1pUT), named after a forward catalytic reaction (<xref ref-type="bibr" rid="B138">Yang et&#xa0;al., 2010</xref>) or UDP-N-acetylglucosamine-1-P pyrophosphorylase (UAP; EC 2.7.7.23), named after a reverse reaction (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Although the biosynthesis of UDP-GlcNAc in prokaryotes and eukaryotes is similar, their catalytic specificity is diverse (<xref ref-type="bibr" rid="B72">Mengin-Lecreulx and Van Heijenoort, 1993</xref>). In bacteria, GlmU is a bifunctional enzyme that exhibits both the phosphoglucosamine acetyltransferase and UDP-N-acetylglucosamine pyrophosphorylase activities; however, these two enzymatic activities are encoded by distinct essential genes in eukaryotes. Thus, GlmU catalyzes the acetylation of GlcN-1-P into GlcNAc-1-P followed by the uridylation of GlcNAc-1-P into UDP-GlcNAc (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>, green dashed line). Inactivation of the <italic>GlmU</italic> gene reduces glycoprotein synthesis, leading to changes in cell shape and lysis changes (<xref ref-type="bibr" rid="B72">Mengin-Lecreulx and Van Heijenoort, 1993</xref>). In yeast, a null mutation of yeast UAP1/QRI1 is lethal, which mainly shows swollen and lysed cell shapes (<xref ref-type="bibr" rid="B75">Mio et&#xa0;al., 1998</xref>). In <italic>Drosophila melanogaster</italic>, the <italic>cabrio</italic>/<italic>mummy</italic> mutant derived from EMS mutagenesis loses <italic>DmUAP</italic> function and exhibits defects in dorsal closure, central nervous system, and embryo development (<xref ref-type="bibr" rid="B97">Schimmelpfeng et&#xa0;al., 2006</xref>). Two human UAPs (AGX1 and AGX2) were identified with only a 17-amino acid difference and these UAPs were derived from alternative splicing and led to preferential substrate specificity in GalNAc-1-P and GlcNAc-1-P, respectively (<xref ref-type="bibr" rid="B128">Wang-Gillam et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B92">Peneff et&#xa0;al., 2001</xref>).</p>
<p>In <italic>Arabidopsis</italic>, two UAPs termed GlcNAc1pUT1 and GlcNAc1pUT2 are encoded by <italic>GlcNA.UT1</italic> and <italic>GlcNA.UT2</italic>, respectively. They were first cloned and their biochemical specificity was characterized by <xref ref-type="bibr" rid="B138">Yang et&#xa0;al. (2010)</xref>. In general, GlcNAc1pUT1 uses GlcNAc-1-P or GalNAc-1-P as substrates together with UTP to form UDP-GlcNAc or UDP-GalNAc and PPi. This uridylation activity is similar to that of human AGX1. GlcNAc1pUT2 has broader substrate specificities and may utilize Glc-1-P as a substrate in addition to GlcNAc-1-P and GalNAc-1-P. Thus, the enzymatic activity of AtGlcNAc1pUT2 is closer to that of yeast UAP1/QRI1 (<xref ref-type="bibr" rid="B75">Mio et&#xa0;al., 1998</xref>) and rice OsUAP1/SPL29 (<xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>). The substrate specificity between GlcNAc1pUT1 and GlcNAc1pUT2 is likely related to their protein structures, which share a similar fold but vary in some loop regions. The biochemical assay also indicated that Arabidopsis GlcNAc1pUTs require divalent ions (such as Mg<sup>2+</sup> or Mn<sup>2+</sup>) for their enzymatic activity. Gel-filtration analysis revealed the monomer structure of the native GlcNAc1pUT1 protein (<xref ref-type="bibr" rid="B138">Yang et&#xa0;al., 2010</xref>), which is different from the dimer structure of human AGX1 (<xref ref-type="bibr" rid="B128">Wang-Gillam et&#xa0;al., 1998</xref>) and yeast UAP1/QRI1 (<xref ref-type="bibr" rid="B73">Milewski et&#xa0;al., 2006</xref>). Although GlcNAc1pUT1 and human AGX1 share 32% protein sequence identity, their three-dimensional protein structure models display a conserved catalytic fold and key conserved motifs (<xref ref-type="bibr" rid="B138">Yang et&#xa0;al., 2010</xref>).</p>
<p>AtGlcNAc1pUT1 may utilize both UDP-GlcNAc and UDP-GalNAc as substrates (<xref ref-type="bibr" rid="B138">Yang et&#xa0;al., 2010</xref>). UDP-GalNAc has been found in several plant species, including squash (<xref ref-type="bibr" rid="B109">Tolstikov and Fiehn, 2002</xref>) and dahlia tubers (<xref ref-type="bibr" rid="B32">Gonzalez and Pontis, 1963</xref>). In barley, UDP-Glc 4-epimerase or UDP-Gal 4-epimerase (UGE; EC 5.1.3.2) catalyzes the interconversion of UDP-Glc and UDP-Gal; the enzyme can also reversibly catalyze UDP-GlcNAc and UDP-GalNAc (<xref ref-type="bibr" rid="B144">Zhang et&#xa0;al., 2006</xref>). Although several UGE genes have been cloned in plants, such as peas, <italic>Arabidopsis</italic>, and the endospermous legume guar (<xref ref-type="bibr" rid="B21">D&#xf6;rmann and Benning, 1996</xref>; <xref ref-type="bibr" rid="B57">Lake and Slocum, 1998</xref>; <xref ref-type="bibr" rid="B49">Joersbo et&#xa0;al., 1999</xref>), the GalNAc targets of glycans and glycoproteins and their physiological significance remain to be further examined. As UDP-GlcNAc and UDP-GalNAc contain the same molecular mass, they cannot be distinguished by mass spectrometry analysis. Specific HPLC analysis can separate these two hexosamines obtained from Arabidopsis tissues (<xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>). In general, UDP-GlcNAc is more abundant than UDP-GalNAc in plant tissues under normal or temperature-stress conditions (<xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>).</p>
<p>Mutation of Arabidopsis <italic>GlcNAc.UT1</italic> or <italic>GlcNAc.UT2</italic> shows no conceivable phenotype, whereas the double mutant is lethal (<xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>), reflecting functional redundancy and the pivotal role of these genes in normal plant growth and development. The heterozygous double mutant <italic>GlcNA.UT1</italic>/<italic>glcna.ut1 glcna.ut2</italic>/<italic>glcna.ut2</italic> obtained from the F2 segregating population following reciprocal crosses of <italic>glcna.ut1</italic> and <italic>glcna.ut2</italic>, displays sterility. Furthermore, this heterozygous double mutant reveals the aberrant transmission of (<italic>glcna.ut1</italic>, <italic>glcna.ut2</italic>) gametes, which is consistent with the defects in male gametophytes during late vacuolation (or pollen mitosis I stage) and in female gametophytes during the uninucleate embryo sac stage. Interestingly, one normal allele of <italic>GlcNA.UT2</italic> in the <italic>glcna.ut1</italic>/<italic>glcna.ut1 GlcNA.UT2</italic>/<italic>glcna.ut2</italic> mutant has normal gamete transmission of (<italic>glcna.ut1</italic>, <italic>glcna.ut2</italic>) and gametophytic development, except that the development of numerous embryos is arrested during the early globular stage (<xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>). Thus, GlcNA1pUT1 and GlcNA1pUT2 differentially regulate gametophytic and embryonic development, which may be associated with their spatiotemporal expression, subtle difference in GlcNAc1pUTase activity, and metabolic complementation (<xref ref-type="bibr" rid="B11">Bonhomme et&#xa0;al., 1998</xref>). To further study Arabidopsis <italic>GlcNA.UT</italic> function, the RNAi transgenic plants, termed iU1s, were generated by RNA interference of <italic>GlcNA.UT1</italic> expression in the <italic>glcna.ut2</italic> null mutant background. The iU1 transgenic plants resemble the heterogeneous double mutant <italic>GlcNA.UT1</italic>/<italic>glcna.ut1 glcna.ut2</italic>/<italic>glcna.ut2</italic> showing sterility under normal growth conditions. The iU1s possess normal levels of hexosamine (UDP-GlcNAc and UDP-GalNAc) compared to the wild type under normal growth conditions, whereas they show reduced hexosamine biosynthesis, altered protein N-glycosylation, and an unfolded protein response under salt-stressed conditions. Moreover, the iU1s confer slat hypersensitivity, including delay of seed germination and early seedling establishment, in association with the induction of ABA biosynthesis and its signal networks under salt stress. Furthermore, microarray analysis data support the upregulation of genes involved in ABA (such as <italic>NCED3</italic>, <italic>ABI5</italic>, and <italic>ABCG25</italic>) and salt stress responses (such as <italic>RD29A</italic>, <italic>RD29B</italic>, and <italic>DREB2A</italic>) (<xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>).</p>
<sec id="s2_4_1">
<label>2.4.1</label>
<title>Biochemical variations and UDP-GlcNAc transport</title>
<p>Likewise, rice <italic>GlcNA.UT</italic>s termed UAP1 or SPOTTED LEAF 29 (SPL29) and UAP2 (<xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>, <xref ref-type="bibr" rid="B125">Wang et&#xa0;al., 2021</xref>) can catalyze GlcNAc-1-P and GalNAc-1-P as substrates to form UDP-GlcNAc (<xref ref-type="bibr" rid="B134">Xiao et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B125">Wang et&#xa0;al., 2021</xref>). OsUAP1/SPL29 irreversibly catalyzes the decomposition of uridine 5&#x2019;-diphosphoglucose (UDPG) to form UTP and Glc-1-P. The loss-of-function <italic>Osuap1</italic>/<italic>spl29</italic> mutant accumulates UDPG, which may be involved in ROS accumulation, early leaf senescence, plant cell death (PCD), and leaf lesion mimics (or defense response) (<xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B134">Xiao et&#xa0;al., 2018</xref>). It remains unknown whether Arabidopsis GlcNAc1pUTs may use UDPG as a substrate similar to rice. As spotted leaves are a lesion-mimic phenotype of the hypersensitive response, the <italic>Osuap1</italic>/<italic>spl29</italic> mutant causes induction of the defense response by upregulation of defense-responsive genes and bacterial blight resistance. In addition, early leaf senescence and defense response enhancement are linked to the accumulation of jasmonic acid, abscisic acid, and reactive oxygen species (ROS) in O<italic>suap1</italic>/<italic>spl29</italic> mutant plants (<xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>). <italic>OsUAP2</italic> overexpression may rescue <italic>Osuap1</italic>/<italic>spl29</italic> mutant phenotypes, reflecting that they share functional redundancy. <italic>OsUAP2</italic> is primarily expressed in the early leaf development and <italic>OsUAP1/SPL29</italic> at the whole leaf developmental stages, and both genes synergistically regulate rice leaf development and protect them from early senescence (<xref ref-type="bibr" rid="B125">Wang et&#xa0;al., 2021</xref>). Thus, unlike Arabidopsis single mutant <italic>glcna.ut1</italic> or <italic>glcna.ut2</italic>, which show no conceivable phenotype, the single <italic>Osuap1</italic>/<italic>spl29</italic> mutant displays early senescence and lesion-mimic spotted leaves, presumably indicating that rice plants are more sensitive to the defense response. The functions of HBP-related genes/proteins are summarized in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Summary of HBP-related gene functions.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="center">Enzyme</th>
<th valign="top" align="center">Other names</th>
<th valign="top" align="center">Substrates</th>
<th valign="top" align="center">Products</th>
<th valign="top" align="center">Localization</th>
<th valign="top" align="center">Stress</th>
<th valign="top" align="center">Mutant phenotypes</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Glutamine:Fru-6-P amidotransferase (GFAT) (A13g24090)</td>
<td valign="top" align="left">GFAT, GlcN6P synthase (eukaryotes); Glms (prokaryotes); GFA (lower eukaryotes)</td>
<td valign="top" align="left">D-Fru-6-P<break/>L-glutamine</td>
<td valign="top" align="left">D-GlcN-6-P<break/>L-glutamate</td>
<td valign="top" align="left">Cytoplasm<sup>2</sup>
</td>
<td valign="top" align="left">Oxidation, drought, cold</td>
<td valign="top" align="left">Inactive pollen activity, reduced GlcN, UDP-GlcNAc, and protein N-glycosylation; impaired plant development and partial sterility; increased tunicamycin sensitivity</td>
</tr>
<tr>
<td valign="top" align="left">GlcN-6P acetyltransferase (GNA) (At5g15770)</td>
<td valign="top" align="left">GNA1 (yeast, rice) GNA LIG (Arabidopsis)</td>
<td valign="top" align="left">D-GlcN-6-P acetyl-CoA</td>
<td valign="top" align="left">GlcNAc CoA</td>
<td valign="top" align="left">ER</td>
<td valign="top" align="left">Arabidopsis: sensitive to high temperature (28 &#xb0;C) rice: sensitive to low temperature (25&#xb0;C)</td>
<td valign="top" align="left">Arabidopsis: reduced UDP-GIcNAc, protein N-glycosylation, and O-GlcNAcylation activity; induced ER stress and UPR; rice: temperature-dependent root elongation and lignin deposition</td>
</tr>
<tr>
<td valign="top" align="left">N-acetylglucosamine-phosphate mutase (AGM) or phosphoacetylglucosamine mutase (A15g18070)</td>
<td valign="top" align="left">AGM, DRT101 (Arabidopsis); AGM1/PGM3 (mice)</td>
<td valign="top" align="left">GlcNAc-6-P Glc-6-P</td>
<td valign="top" align="left">GlcNAc-1-P Glc-1-P</td>
<td valign="top" align="left">Cytosol, cytomembrane, chloroplast, mitochondrium</td>
<td valign="top" align="left">Temperature</td>
<td valign="top" align="left">Arabidopsis: vigorous growth, reduced UDP-GIcNAc; high temperature-dependent (28&#xb0;C) growth defects, including short roots and germination delay; impairment of O-GlcNAcylation</td>
</tr>
<tr>
<td valign="top" align="left">N-acetylglucosamine-1-P uridylyltransferase (GlcNAc1pUT); UDP-N- acetylglucosamine pyrophosphorylase (UAP) (AT1G31070, AT2G35020)</td>
<td valign="top" align="left">GlcNAc1pUT1 and 2 (Arabidopsis); UAP1, SPL29 (rice); GlmU (prokaryote); UAP1, QRI1 (yeast); AGX1, AGX2 (human)</td>
<td valign="top" align="left">GlcNAc-1-P UDPG<sup>3</sup>
</td>
<td valign="top" align="left">UDP- GlcNAc<break/>UDP- GalNAc Glc-1-P</td>
<td valign="top" align="left">Cytoplasm, plasma membrane</td>
<td valign="top" align="left">Arabidopsis: salt-sensitive, response to UV rice: bacterial blight resistance, defense response, sensitivity to high temperature</td>
<td valign="top" align="left">Arabidopsis: defective in gametogenesis and embryo development; salt-induced delay of seed germination and early seedling growth; reduced UDP-hexoNAc, altered N-glycosylation, and induced UPR under salt stress rice: leaf senescence and defense response, UDPG and ROS accumulation, short root and germination delay at high temperature, reduced N-glycosylation</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>
<sup>1</sup>Mutant phenotypes represent knockdown mutant plants because the knockout mutants are lethal.</p>
</fn>
<fn>
<p>
<sup>2</sup>Localization of GFAT and GlcNAc1pUTs is based on the annotation of The Arabidopsis Information Resource (TAIR).</p>
</fn>
<fn>
<p>
<sup>3</sup>UDPG, uridine 5&#x2019;-diphosphoglucose.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>It was reported that NO PERCEPTION 1 (NOPE1) acts as the GlcNAc transporter localized in the plasma membrane of the root tissues of rice and maize. NOPE1 transports GlcNAc into the rhizosphere, where it serves as a molecular signal to enhance branching hyphae of arbuscular mycorrhiza (AM) and benefit the symbiosis between AMs and host plants (<xref ref-type="bibr" rid="B80">Nadal et&#xa0;al., 2017</xref>). Arabidopsis genome contains UDP-GlcNAc transporters, one was termed UDP-GlcNAc transporter (UGNT1; At4g32272), in the Golgi membrane, which transports UDP-GlcNAc from the cytosol to the Golgi to initiate complex glycan processing. The <italic>Atugnt1</italic> null mutant plants lack complex and hybrid N-glycans, and the N-glycopeptides primarily contain high-mannose structures. Moreover, AtUGNT1 is also needed for the biosynthesis of GlcNAc-containing glycosyl inositol phosphorylceramides (GIPCs) (<xref ref-type="bibr" rid="B23">Ebert et&#xa0;al., 2018</xref>). Another transporter for UDP-GlcNAc and UDP-GalNAc is the REPRESSOR OF CYTOKININ DEFICIENCY 1 (ROCK1, At5g65000), which is localized in the ER membrane and involved in ER quality control. The <italic>Atrock1</italic> mutant reduces the activity of cytokinin oxidases/dehydrogenases (CKXs, cytokinin-degrading enzymes) and impairs the cytokinin-deficient mutant phenotype. Although the N-glycosylation of CKX1 is not affected in <italic>Atrock1</italic>, the stability of CKX1 is enhanced in the mutant (<xref ref-type="bibr" rid="B83">Niemann et&#xa0;al., 2015</xref>) (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). The function of ROCK1 in providing UDP-GlcNAc for the ER lumen remains unknown because GlcNAc conjugates in the ER have not been uncovered to date. One possibility is that UDP-GlcNAc in the ER may be transported to the Golgi apparatus for complex glycan modification (<xref ref-type="bibr" rid="B23">Ebert et&#xa0;al., 2018</xref>).</p>
</sec>
</sec>
</sec>
<sec id="s3">
<label>3</label>
<title>Salvage pathway of GlcN and GlcNAc</title>
<p>In addition to <italic>de novo</italic> biosynthesis through HBP, UDP-GlcNAc can be generated by the salvage pathway. In mammals, GlcN and GlcNAc can be retrieved from environmental resources and the degradation of glycans or glycoconjugates. These salvage nutrients can be used as dietary supplements to benefit from the treatment of disorders linked to glycosylation. GlcN can be phosphorylated to form GlcN-6-P by hexokinase and then enters the HBP to produce UDP-GlcNAc (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>, purple line) (<xref ref-type="bibr" rid="B55">Kornfeld, 1967</xref>; <xref ref-type="bibr" rid="B56">Krug et&#xa0;al., 1984</xref>). In Arabidopsis, the exogenous application of GlcN to <italic>Atgfat1</italic> mutant plants may rescue mutant phenotypes, indicating that the GlcN can be converted into GlcN-6-P, which further enters HBP to form UDP-GlcNAc (<xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>).</p>
<p>GlcNAc can be phosphorylated to form GlcNAc-6-P by GlcNAc kinase (GNK) or N-acetylglucosamine kinase (NAGK) (<xref ref-type="bibr" rid="B29">Gindzie&#x144;ski et&#xa0;al., 1974</xref>; <xref ref-type="bibr" rid="B2">Allen and Walker, 1980</xref>; <xref ref-type="bibr" rid="B41">Hinderlich et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B8">Berger et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B96">Ryczko et&#xa0;al., 2016</xref>). This intermediate GlcNAc-6-P further enters the HBP to form UDP-GlcNAc (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>, purple line). In mammals, NAGK is needed for embryonic mouse development (<xref ref-type="bibr" rid="B20">Dickinson et&#xa0;al., 2016</xref>). Deletion of NAGK increases <italic>de novo</italic> hexosamine biosynthesis; conversely, glutamine deprivation inhibits <italic>de novo</italic> HBP but triggers the NAGK-dependent salvage pathway in pancreatic ductal adenocarcinoma (PDAC) (<xref ref-type="bibr" rid="B15">Campbell et&#xa0;al., 2021</xref>), suggesting that cross-talk occurs between the salvage and <italic>de novo</italic> HBP. In higher plants, the GNK was first identified and characterized in <italic>Arabidopsis</italic> by <xref ref-type="bibr" rid="B27">Furo et&#xa0;al. (2015)</xref>. Arabidopsis GNK (At1g30540) and human NAGK proteins share high structural conservation, particularly in GlcNAc and ATP binding domains. The kinase activity of AtGNK was confirmed by an enzymatic activity assay <italic>in vitro</italic> through recombinant AtGNK protein. Substrate analysis further supports that AtGNK exhibits high specificity for GlcNAc and less specificity for GalNAc. Furthermore, although the null mutant <italic>Atgnk</italic> shows no conceivable phenotype, the mutant plants reveal lower levels of UDP-GlcNAc than the wild type and are insensitive to the exogenous application of GlcNAc (<xref ref-type="bibr" rid="B27">Furo et&#xa0;al., 2015</xref>). The GlcNAc salvage pathway is also observed in the <italic>Atgna</italic>/<italic>lig</italic> mutant, which is defective in the conversion of GlcN-6-P to GlcNAc-6-P and leads to a reduction in UDP-GlcNAc levels, high-temperature sensitivity, and ectopic accumulation of lignin. Exogenous application of GlcNAc rescues the <italic>Atgna</italic>/<italic>lig</italic> mutant phenotypes and increases the UDP-GlcNAc content (<xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>). Therefore, the <italic>Atgna</italic>/<italic>lig</italic> mutant fails to convert GlcN6-P to GlcNAc-6P; however, exogenous GlcNAc can be catalyzed by AtGNK to form GlcNAc-6-P, which further enters the HBP to produce UDP-GlcNAc. Similarly, wild-type plants (Col-o) produce more UDP-HexNAc (UDP-GlcNAc and UDP-GalNAc) by exogenous GlcNAc under normal and salt-stressed conditions (<xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>). The coexistence of HBP and salvage pathways may finetune the homeostasis of UDP-GlcNAc contents in plants in response to nutrient fluctuations and environmental stimuli.</p>
</sec>
<sec id="s4">
<label>4</label>
<title>N-linked glycosylation</title>
<p>Asparagine (Asn- or N-) glycosylation is among the most common co- or post-translational modifications, which is essential for plant growth and stress responses and is conserved across eukaryotes (<xref ref-type="bibr" rid="B4">Banerjee et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B5">Bao and Howell, 2017</xref>; <xref ref-type="bibr" rid="B82">Nagashima et&#xa0;al., 2018</xref>). N-glycosylation regulates protein folding, transport, sorting, degradation, and intracellular signaling (<xref ref-type="bibr" rid="B40">Helenius and Aebi, 2001</xref>; <xref ref-type="bibr" rid="B79">Molinari, 2007</xref>; <xref ref-type="bibr" rid="B1">Aebi, 2013</xref>; <xref ref-type="bibr" rid="B60">Lannoo and Van Damme, 2015</xref>; <xref ref-type="bibr" rid="B99">Shin et&#xa0;al., 2018</xref>). Most secreted and membrane-associated proteins are N-glycosylated proteins (N-glycoproteins), and they are involved in a wide range of cellular processes, including cell wall biosynthesis (<xref ref-type="bibr" rid="B50">Jose-Estanyol and Puigdomenech, 2000</xref>), pollination (<xref ref-type="bibr" rid="B35">Hancock et&#xa0;al., 2005</xref>), pathogen defense (<xref ref-type="bibr" rid="B91">Pearce et&#xa0;al., 2007</xref>), and cell-to-cell communication (<xref ref-type="bibr" rid="B108">Taoka et&#xa0;al., 2007</xref>). Biosynthesis of N-glycan occurs in multiple subcellular compartments, including the cytosol, endoplasmic reticulum (ER) lumen, and Golgi apparatus (<xref ref-type="bibr" rid="B90">Pattison and Amtmann, 2009</xref>). Initially, N-glycan is formed as an oligosaccharide precursor on a lipid-linked carrier, dolichol pyrophosphate (PP-Dol), on the cytosolic side of the ER membrane (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Two GlcNAc molecules are first transferred to PP-Dol by GlcNAc-1-phosphotransferase (GPT) or asparagine-linked glycosylation (ALG) enzyme ALG7 and the ALG13/14. Subsequently, five mannose (Man) residues are added by mannosyltransferases, ALG1/2/11, to form Man5GlcNAc2-PP-Dol (<xref ref-type="bibr" rid="B12">Burda and Aebi, 1999</xref>; <xref ref-type="bibr" rid="B106">Strasser et&#xa0;al., 2021</xref>). This oligosaccharide precursor is then flipped to face the ER lumen for further modification (<xref ref-type="bibr" rid="B90">Pattison and Amtmann, 2009</xref>; <xref ref-type="bibr" rid="B106">Strasser et&#xa0;al., 2021</xref>).</p>
<p>In the ER lumen, four more Man and three Glc residues are sequentially added to form the core oligosaccharide Glc3Man9GlcNAc2-PP-Dol, which is assembled by a series of membrane-bound mannosyltransferases (ALG3/9/12) and glycosyltransferases (ALG6/8/10) (<xref ref-type="bibr" rid="B103">Snider et&#xa0;al., 1980</xref>; <xref ref-type="bibr" rid="B40">Helenius and Aebi, 2001</xref>; <xref ref-type="bibr" rid="B82">Nagashima et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B106">Strasser et&#xa0;al., 2021</xref>). N-glycosylation occurs in the ER lumen by transferring the core oligosaccharide to Asn in the Asn-X-Ser/Thr motif (X, any amino acid except Pro) of a nascent peptide, which is mediated by an oligosaccharyltransferase (OST) complex (<xref ref-type="bibr" rid="B12">Burda and Aebi, 1999</xref>; <xref ref-type="bibr" rid="B90">Pattison and Amtmann, 2009</xref>; <xref ref-type="bibr" rid="B104">Strasser, 2016</xref>). The N-linked Glc3Man9GlcNAc2 glycan is further processed by the sequential removal of three Glc residues by glucosidase I and II (GCSI and GCSII) (<xref ref-type="bibr" rid="B112">Trombetta and Parodi, 2003</xref>; <xref ref-type="bibr" rid="B82">Nagashima et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B106">Strasser et&#xa0;al., 2021</xref>), and a Man residue is removed by the ER-&#x3b1;-mannosidase I (MNS3; <xref ref-type="bibr" rid="B62">Liebminger et&#xa0;al., 2009</xref>). The correctly folded glycoproteins leave the ER and move into the Golgi apparatus for further complex and hybrid N-glycan modification (<xref ref-type="bibr" rid="B104">Strasser, 2016</xref>).</p>
<p>In the Golgi, the first N-glycan processing is carried out by &#x3b1;-1,2-mannosidase I (MNS1/2), which removes three Man residues from Man8GlcNAc2 to form Man5GlcNAc2, the product for the subsequent complex and hybrid N-glycan processing. The formation of complex and hybrid N-glycan is initiated by the N-ACETYLGLUCOSAMINYL TRANSFERASE I (GnTI)-mediated addition of the GlcNAc residue to the &#x3b1;-1,3-linked Man of the Man5GlcNAc2 to form GlcNAcMan5GlcNAc2 (<xref ref-type="bibr" rid="B117">von Schaewen et&#xa0;al., 1993</xref>; <xref ref-type="bibr" rid="B105">Strasser et&#xa0;al., 1999</xref>). Subsequently, alternative processing pathways can occur in plants (<xref ref-type="bibr" rid="B6">Benc&#xfa;r et&#xa0;al., 2005</xref>). In the canonical pathway, two Man residues are cleaved from GlcNAcMan5GlcNAc by Golgi-&#x3b1;-mannosidase II (GMII), followed by GnTII-mediated addition of another GlcNAc residue to the &#x3b1;1,6-linked Man to form GlcNAc2Man3GlcNAc2. Afterward, Xyl, Fuc, and two Gal are added to the acceptor substrate GlcNAc2Man3GlcNAc2, which are catalyzed by XylT (xylosyltransferase), FUT11/12 (fucosyltransferases), and GALT1 (galactosyltransferase), respectively. Finally, FUT13 (&#x3b1;-(1-&gt;,4)-fucosyltransferase) transfers a Fuc residue to the &#x3b1;-(1-&gt;4)-linked GlcNAc to complete the Lewis A-type structure, which is a trisaccharide structure (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) (<xref ref-type="bibr" rid="B104">Strasser, 2016</xref>; <xref ref-type="bibr" rid="B106">Strasser et&#xa0;al., 2021</xref>). The resulting products could be secreted to their destinations. Golgi-resident GnTI is the key enzyme in complex and hybrid N-glycan processing. The Arabidopsis <italic>complex glycan less 1</italic> (<italic>cgl1</italic>) mutant, which is defective in GnTI activity, lacks complex and hybrid N-glycans and exhibits reduced N-glycosylation efficiency (<xref ref-type="bibr" rid="B117">von Schaewen et&#xa0;al., 1993</xref>; <xref ref-type="bibr" rid="B107">Strasser et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B26">Frank et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B25">Farid et&#xa0;al., 2013</xref>). However, the <italic>cgl1</italic> mutant displays no apparent phenotype under normal growth conditions but confers salt hypersensitivity (<xref ref-type="bibr" rid="B52">Kang et&#xa0;al., 2008</xref>). In contrast to the Arabidopsis <italic>cgl1</italic> mutant, the rice <italic>gnt1</italic> mutant displays severe phenotypes showing arrest in postseedling development, defects in cell wall biosynthesis, and reduced cytokinin signaling (<xref ref-type="bibr" rid="B24">Fanata et&#xa0;al., 2013</xref>). The mechanisms that cause these markedly different phenotypes between Arabidopsis <italic>cgl1</italic> and rice <italic>gnt1</italic> remain to be illustrated in the future.</p>
<p>Interruption with N-glycan biosynthesis at any step by mutation of genes or treatments of pharmaceutical drugs, such as tunicamycin and DTT, will lead to incomplete N-glycans and affect N-glycosylated proteins (<xref ref-type="bibr" rid="B90">Pattison and Amtmann, 2009</xref>). Unfolded or misfolded proteins will accumulate in the ER and result in ER stress; eventually, the unfolded protein response (UPR) is activated to enhance the capacity for protein folding, increase the ER quality control, impair general protein translation, and maintain ER homeostasis (<xref ref-type="bibr" rid="B5">Bao and Howell, 2017</xref>; <xref ref-type="bibr" rid="B139">Yu et&#xa0;al., 2022</xref>). Defects in N-glycan processing may impair plant growth and stress responses or cause lethality (<xref ref-type="bibr" rid="B59">Lane et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B54">Koiwa et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B61">Lerouxel et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B143">Zhang et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B24">Fanata et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B5">Bao and Howell, 2017</xref>; <xref ref-type="bibr" rid="B82">Nagashima et&#xa0;al., 2018</xref>). Despite the significance of N-glycosylation, most studies in the past have focused on the core N-glycan formation in the ER lumen and the modification of complex N-glycans on glycoproteins in the Golgi apparatus. The effect of cytosolic oligosaccharide precursor production on plant growth and stress response is less addressed. As mentioned above, HBP generates UDP-GlcNAc to provide GlcNAc donors and initiate oligosaccharide precursor production on the cytosolic side of the ER. Defects in HBP enzymes may reduce UDP-GlcNAc levels, impair N-linked glycosylation, and alter plant growth under normal (<xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B134">Xiao et&#xa0;al., 2018</xref>) or abiotic stress conditions (<xref ref-type="bibr" rid="B143">Zhang et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>). Moreover, a complete block of HBP normally leads to lethality (<xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>).</p>
<p>It has been reported that N-glycan processing mutants alter the abiotic stress responses, such as salt stress. The <italic>staurosporine and temperature sensitive 3a</italic> (<italic>stt3a</italic>) mutant, in which a catalytic subunit of the OST complex in the ER is defective, and <italic>leaf wilting 3</italic> (<italic>lew3</italic>), a mutant that lacks &#x3b1;-1,2-mannosyltransferase, induce UPR-mediated <italic>BiP</italic> gene expression and enhance salt stress sensitivity (<xref ref-type="bibr" rid="B54">Koiwa et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B143">Zhang et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B48">Jiao et&#xa0;al., 2020</xref>). However, Arabidopsis <italic>complex glycan 1</italic> (<italic>cgl1</italic>), a mutant that lacks GnTI activity, shows a deprived complex and hybrid N-glycans and confers salt hypersensitivity (<xref ref-type="bibr" rid="B26">Frank et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B52">Kang et&#xa0;al., 2008</xref>). Unlike <italic>stt3a</italic>, which shows a UPR response, the <italic>cgl1</italic> mutant fails to induce a UPR response. Thus, the UPR is likely not the major player that enhances salt hypersensitivity in the mutants with defective N-glycan processing. Furthermore, the mutation of <italic>UDP-GlcNAc transporter 1</italic> (<italic>UGNT1</italic>) leads to deprived complex and hybrid N-glycan in the Golgi apparatus and does not increase salt hypersensitivity (<xref ref-type="bibr" rid="B23">Ebert et&#xa0;al., 2018</xref>). These data suggest that mature complex N-glycans are not the major factor leading to salt hypersensitivity. It was generally proposed that mutants defective in N-glycan processing in the ER lumen or Golgi apparatus might alter a different set of glycoprotein and/or glycolipid functions, which further integrate to alter plant growth and abiotic stress response. Compared to the Arabidopsis <italic>stt3a</italic> mutant showing short root elongation under salt stress, <italic>glcna.ut</italic> mutants, such as the RNAi knockdown mutants iU1s, display normal root elongation under salt stress (<xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>). Although the UPR response is induced and N-linked glycosylation is impaired in iU1 mutants, these mutants exhibit salt hypersensitivity in terms of delayed seed germination and early seedling establishment, the phenotypes of which are different from those of <italic>stt3a</italic> mutant plants. The <italic>stt3a</italic> mutant, such as <italic>stt3a-2</italic>, also displays a higher stomatal density and transpiration rate in association with low endogenous ABA and auxin (IAA) levels. Thus, <italic>stt3a</italic> mutant plants are more sensitive to salt and drought stresses. These mutant phenotypes are correlated with the underglycosylation of &#x3b2;-glucosidase (AtBG1), catalyzing the conversion of conjugated ABA or IAA to its active form (<xref ref-type="bibr" rid="B48">Jiao et&#xa0;al., 2020</xref>). Consistently, exogenous application of ABA or IAA to <italic>stt3a-2</italic> may partially rescue the mutant phenotypes. In contrast, the <italic>GlcNA.UT</italic> knockdown lines iU1s, reveal higher levels of ABA under salt stress conditions (<xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>). Thus, although <italic>stt3a</italic> and iU1 affect the N-glycosylation of proteins, they could use different mechanisms in response to salt stress. It is conceivable that GlcNAc1pUTs produce UDP-GlcNAc not only for N-glycan synthesis in the ER lumen and maturation in the Golgi apparatus but also for the O-GlcNAcylation of primarily cytosolic and nuclear proteins (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Thus, in addition to N-glycan processing, HBP has a wider range of effects on plant growth and abiotic stress response through diverse GlcNAc targets or conjugates.</p>
</sec>
<sec id="s5">
<label>5</label>
<title>O-GlcNAcylation</title>
<p>O-GlcNAcylation is the addition of O-linked N-acetylglucosamine (O-GlcNAc) to the serine (Ser) and threonine (Thr) residues of nucleocytoplasmic and mitochondrial proteins (<xref ref-type="bibr" rid="B43">Hu et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B68">Ma et&#xa0;al., 2022</xref>), which was first reported by <xref ref-type="bibr" rid="B110">Torres and Hart (1984)</xref>. In contrast to N-linked glycosylation, which involves the attachment of complex glycans to proteins for the secretary pathway, O-GlcNAcylation involves the direct addition of a single GlcNAc residue to the Ser/Thr residues of proteins, which primarily occurs in the cytosol or nucleus (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). O-GlcNAcylation is also among the most common co- or post-translational modifications and is conserved across organisms (<xref ref-type="bibr" rid="B51">Joshi et al., 2018</xref>; <xref ref-type="bibr" rid="B68">Ma et&#xa0;al., 2022</xref>). O-GlcNAcylated proteins are involved in most aspects of cellular functions including metabolism, transcriptional regulation, signaling, cell cycle regulation, protein trafficking, protein-protein interaction, and cell structure (<xref ref-type="bibr" rid="B129">Wells et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B66">Love and Hanover, 2005</xref>; <xref ref-type="bibr" rid="B36">Hart et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B64">Liu et&#xa0;al., 2022</xref>). In mammals, dysregulation of O-GlcNAcylation may be linked to chronic disorders, including the occurrence and progression of cancer (<xref ref-type="bibr" rid="B102">Slawson and Hart, 2011</xref>; <xref ref-type="bibr" rid="B100">Singh et&#xa0;al., 2015</xref>), diabetic complications (<xref ref-type="bibr" rid="B94">Peterson and Hart, 2016</xref>), neurodegeneration (<xref ref-type="bibr" rid="B36">Hart et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B31">Gong et&#xa0;al., 2012</xref>), and cardiovascular diseases (<xref ref-type="bibr" rid="B126">Wang et&#xa0;al., 2023</xref>), and the immune system (<xref ref-type="bibr" rid="B30">Golks and Guerini, 2008</xref>). Thus, manipulating O-GlcNAcylation may be a potential strategy for cancer therapy (<xref ref-type="bibr" rid="B67">Lu et&#xa0;al., 2022</xref>).</p>
<p>O-GlcNAcylated proteins are usually phosphorylated. As O-GlcNAcylation and phosphorylation are dynamic reactions that cycle rapidly, both post-translational modifications compete with the same Ser/Thr sites or modify nearby/or distant sites to show complex interplay and coordinate protein stability and function in response to external stimuli (<xref ref-type="bibr" rid="B101">Slawson and Hart, 2003</xref>; <xref ref-type="bibr" rid="B121">Wang et&#xa0;al., 2008c</xref>; <xref ref-type="bibr" rid="B14">Butkinaree et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B140">Zeidan and Hart, 2010</xref>; <xref ref-type="bibr" rid="B36">Hart et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B71">Mart&#xed;nez-Turi&#xf1;o et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B137">Xu et&#xa0;al., 2019</xref>). For instance, O-GlcNAcylation and phosphorylation coexist in the capsid protein (CP) of the plum pox virus (PPV). Although O-GlcNAcylation of PPV CP is not needed for virus viability, it increases viral infection (<xref ref-type="bibr" rid="B93">P&#xe9;rez Jde et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B71">Mart&#xed;nez-Turi&#xf1;o et&#xa0;al., 2018</xref>). Moreover, vernalization increases the O-GlcNAc modification of nuclear TaGRP2 (a repressor in vernalization) and the phosphorylation of VER2 (an activator in vernalization); both modified proteins antagonistically regulate the expression of TaVRN1 to mediate flowering in winter wheat (<xref ref-type="bibr" rid="B133">Xiao et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B137">Xu et&#xa0;al., 2019</xref>).</p>
<p>The first public bioinformatics resource of O-GlcNAcylated proteins was established by <xref ref-type="bibr" rid="B123">Wang et&#xa0;al. (2011)</xref>, in which approximately 1240 proteins are potentially O-GlcNAcylated. Later, over 1000 O-GlcNAcylated proteins were uncovered in different studies of mammalian cells (<xref ref-type="bibr" rid="B111">Trinidad et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B34">Hahne et&#xa0;al., 2013</xref>). Recently, with more improved techniques, over 5000 O-GlcNAcylated proteins were identified using human models (<xref ref-type="bibr" rid="B131">Wulff-Fuentes et&#xa0;al., 2021</xref>). In <italic>Arabidopsis</italic>, <xref ref-type="bibr" rid="B136">Xu et&#xa0;al. (2017)</xref> identified 262 proteins with O-GlcNAcylation. Among them, the O-GlcNAcylated and O-fucosylated protein AtACINUS is involved in ABA sensitivity through alternative splicing of HIGH LEVEL OF BETA-AMYLASE ACTIVITY 1 (HBA1) and ABA HYPERSENSITIVE 1 (ABH1), negative regulators of ABA signaling, and in flowering through transcriptional regulation of the floral repressor FLOWERING LOCUS C (FLC) (<xref ref-type="bibr" rid="B9">Bi et&#xa0;al., 2021</xref>). In addition, a total of 168 O-GlcNAcylated proteins were found in winter wheat (<xref ref-type="bibr" rid="B137">Xu et&#xa0;al., 2019</xref>); these proteins perform functions in metabolism, response to stimuli, cellular processing, signal transduction, and transcriptional regulation. Thus, the total number of identified proteins of O-GlcNAcylation is far lower in plants than in mammalian cells.</p>
<p>O-GlcNAcylation is catalyzed by O-GlcNAc transferase (OGT) (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Phylogenetic analysis revealed that metazoans contain a single OGT, whereas vascular plants and moss have two homologs of OGTs (<xref ref-type="bibr" rid="B86">Olszewski et&#xa0;al., 2010</xref>). Considering that GlcNAc is needed for O-GlcNAcylation and UDP-GlcNAc, the donor of GlcNAc, is synthesized through HBP, HBP might perform crosstalk with O-GlcNAcylation to optimize nutrient status and O-GlcNAcylation cycling. In <italic>Drosophila</italic>, protein O-GlcNAcylation displays a circadian rhythm mediated by the HBP enzyme GFAT and the O-GlcNAcylation enzymes, OGT and O-GlcNAcase (OGA), an enzyme removing GlcNAc from O-GlcNAcylated proteins (<xref ref-type="bibr" rid="B63">Liu et&#xa0;al., 2021</xref>). The Arabidopsis knockdown mutant <italic>Atagm</italic> reduces UDP-GlcNAc production and shows a temperature-dependent growth defect that is associated with the impairment of protein O-GlcNAcylation (<xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>). In <italic>Arabidopsis</italic>, two OGT homologs, SECRET AGENT (SEC) and SPINDLY (SPY), catalyze O-GlcNAcylation and O-linked fucosylation, respectively (<xref ref-type="bibr" rid="B38">Hartweck et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B141">Zentella et&#xa0;al., 2016</xref>, <xref ref-type="bibr" rid="B142">Zentella et&#xa0;al., 2017</xref>). The Arabidopsis null <italic>sec</italic> mutant only displays a subtle phenotype (<xref ref-type="bibr" rid="B38">Hartweck et&#xa0;al., 2002</xref>), but the <italic>spy</italic> mutant shows an apparent GA response, indicating that SPY acts as a negative regulator of GA signaling (<xref ref-type="bibr" rid="B130">Wilson and Somerville, 1995</xref>; <xref ref-type="bibr" rid="B44">Jacobsen et&#xa0;al., 1996</xref>). Moreover, the <italic>sec</italic>/<italic>spy</italic> double mutant is lethal, with defects in gamete and seed development that are similar to the knockout <italic>OGT</italic> mutants in mice and <italic>Drosophila</italic>, in which embryonic lethality occurs (<xref ref-type="bibr" rid="B98">Shafi et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B28">Gambetta et&#xa0;al., 2009</xref>). These data indicate that although SEC and SPY have overlapping functions involved in GA signaling, they also have distinct roles and may play a synergistic function in plant growth and development (<xref ref-type="bibr" rid="B38">Hartweck et&#xa0;al., 2002</xref>, <xref ref-type="bibr" rid="B37">Hartweck et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B141">Zentella et&#xa0;al., 2016</xref>, <xref ref-type="bibr" rid="B142">Zentella et&#xa0;al., 2017</xref>). Later, it was reported that the Arabidopsis <italic>sec</italic> mutant displays an early-flowering phenotype, which is associated with the inhibition of O-GlcNAcylation of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1), a histone lysine methyltransferase (HKMT). The impaired activity of ATX1 reduces histone H3 lysine 4 trimethylation (H3K4me3) of the <italic>FLC</italic> gene, a negative regulator of flowering (<xref ref-type="bibr" rid="B135">Xing et&#xa0;al., 2018</xref>). The Arabidopsis DELLA protein RGA (REPRESSOR OF <italic>ga1-3</italic>), a master negative regulator of the GA response, is O-GlcNAcylated by SEC; this suppresses the interactions of RGA with other key transcription factors, such as PIFs, BZR1, and JAZ1, which are involved in light, brassinosteroid, and jasmonate signalings, respectively (<xref ref-type="bibr" rid="B141">Zentella et&#xa0;al., 2016</xref>). In addition to DELLA proteins, several important transcription factors involved in plant hormone signaling are O-GlcNAcylated, such as ARFs, TCPs, EIN2, and ABF3, which are involved in the signaling of auxin, cytokinin, ethylene, and ABA, respectively (<xref ref-type="bibr" rid="B136">Xu et&#xa0;al., 2017</xref>). Compared to mammals, numerous proteins of O-GlcNAcylation in plants remain to be uncovered, and further characterization of these modified proteins will shed light on the significance of O-GlcNAcylation biology.</p>
</sec>
<sec id="s6">
<label>6</label>
<title>Hexosamine biosynthesis and related pathways in response to stresses</title>
<p>UDP-GlcNAc biosynthesis through HBP is essential for the glycosylation of proteins and lipids (<xref ref-type="bibr" rid="B23">Ebert et&#xa0;al., 2018</xref>). Thus, the endogenous levels of UDP-GlcNAc levels intimately affect the glycosylation of proteins and lipids. For example, partial loss-of-function mutations in HBP-related genes normally reduce UDP-GlcNAc levels and impair N-glycosylation and/or O-GlcNAcylation of proteins (<xref ref-type="bibr" rid="B47">Jiang et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>). Interestingly, these knockdown mutants largely display no apparent phenotype under normal growth conditions; however, these mutants exhibit stress-induced growth defects. This indicates that a small amount of UDP-GlcNAc is sufficient to maintain normal plant growth but more UDP-GlcNAc levels and protein glycosylation are needed for plants to adapt to deleterious environments. Most N-glycoproteins are membrane-associated and secreted proteins. Thus, changes in N-glycosylation through adverse environments or mutations of genes involved in HBP and N-glycan processing may alter glycoprotein functions in cell wall biosynthesis and integrity and membrane-associated proteins, resulting in altered sensitivities to biotic, such as bacterial blight tolerance (<xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>), abiotic stresses, such as drought, salt, cold, and high temperature (<xref ref-type="bibr" rid="B47">Jiang et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B134">Xiao et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>), or phytohormones, such as ABA, auxin, and JA (<xref ref-type="bibr" rid="B143">Zhang et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B24">Fanata et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B124">Wang et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B48">Jiao et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>). Defects in N-glycoproteins might also cause the accumulation of unfolded or misfolded proteins in ER, leading to ER stress and further induction of UPR to enhance protein folding capacity and diminish ER stress (<xref ref-type="bibr" rid="B5">Bao and Howell, 2017</xref>; <xref ref-type="bibr" rid="B139">Yu et&#xa0;al., 2022</xref>). Therefore, ER stress or UPR can be observed in the mutations of HBP-related genes, such as <italic>GFAT</italic>, <italic>GNA</italic>, and <italic>GlcNA.UT</italic>s/or <italic>UAP</italic>/<italic>SPL29</italic> (<xref ref-type="bibr" rid="B134">Xiao et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B84">Nozaki et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B118">Vu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2022</xref>) and N-glycan processing mutants, <italic>stt3a</italic> and <italic>lew3</italic> (<xref ref-type="bibr" rid="B54">Koiwa et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B143">Zhang et&#xa0;al., 2009</xref>). As UDP-GlcNAc is also essential for O-GlcNAcylation, defects in UDP-GlcNAc biosynthesis through HBP, such as AGM, or mutation of O-GlcNAcylation-related genes, such as <italic>SEC</italic>, might affect the functions of O-GlcNAcylated proteins, such as ATX1 and DELLA proteins, which further change temperature-dependent growth defects and cellular signalings, such as phytohormones ABA, GA, auxin, CK, and JA (<xref ref-type="bibr" rid="B141">Zentella et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B46">Jia et&#xa0;al., 2023</xref>), vernalization (<xref ref-type="bibr" rid="B133">Xiao et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B137">Xu et&#xa0;al., 2019</xref>), and viral infection (<xref ref-type="bibr" rid="B93">P&#xe9;rez Jde et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B71">Mart&#xed;nez-Turi&#xf1;o et&#xa0;al., 2018</xref>). Hexosamine biosynthesis and related pathways in response to stresses are summarized in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Hexosamine biosynthesis and related pathways in response to stresses. This diagram depicts that the HBP integrates several key metabolites to synthesize UDP-GlcNAc, an essential amino sugar moiety of glycosylation of proteins and lipids. Under stress conditions, HBP integrates endogenous metabolites and energy status to maintain UDP-GlcNAc homeostasis and reprogram metabolic pathways including glycosylation to benefit plant adaptation to deleterious environments. Fru-6-P, fructose-6-phosphate; L-Gln, L-glutamine; CoA, coenzyme A; UTP, uridine triphosphate; ABA, abscisic acid; JA, jasmonic acid; CK, cytokinin; GA, gibberellic acid.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-15-1349064-g003.tif"/>
</fig>
</sec>
<sec id="s7" sec-type="conclusions">
<label>7</label>
<title>Conclusions and future perspectives</title>
<p>Although the HBP is considered a minor side pathway of glycolysis, it integrates the endogenous nutrient status of plants and rewires the metabolic programs to improve plant development and adaption to environmental challenges. Thus, HBP serves as a metabolic integrator or sensor to fine-tune the nutrient balance and maintain UDP-GlcNAc homeostasis. Dysfunction of HBP often causes severe phenotypes or even lethality. Research progress on HBP in plants has been much slower than that in microbes and mammals. To date, despite HBP&#x2019;s studies having made a great step in plants, several aspects remain to be further explored in the future.</p>
<list list-type="simple">
<list-item>
<p>1. HBP-related enzymatic proteins, such as GlcNAc1pUT2, UAP1/SPL29, and AtAGM, often have multiple substrates and products (or intermediates). The functions of these products&#x2019; targets or conjugates remain to be illustrated.</p>
</list-item>
<list-item>
<p>2. In addition to the cytosol and ER surface of the cytosolic side, enzymes, such as AGM and GlcNAc1pUT1, have several subcellular localizations, such as nuclei and organelles. It remains to be determined whether these proteins perform additional functions in addition to their involvement in the HBP.</p>
</list-item>
<list-item>
<p>3. How nutrient availability and environmental conditions control the HBP flux needs to be further examined in plants.</p>
</list-item>
<list-item>
<p>4. The total proteins of N-glycosylation and O-GlcNAcylation were underestimated in plants compared to mammals. Thus, high-throughput analysis of more GlcNAc-conjugated proteins needs to be performed, and the functions of these modified proteins remain to be characterized.</p>
</list-item>
<list-item>
<p>5. In addition to phosphorylation, O-GlcNAcylation sites of proteins can also compete with other post-translational modifications. The biological functions of these modified proteins also need to be unraveled in the future.</p>
</list-item>
</list>
<p>A better understanding of the functions of HBP, GlcNAc conjugates, and the mechanisms by which HBP responds to abiotic stress will reveal possible strategies to modify HBP in the biofortification of agriculture in the future.</p>
</sec>
<sec id="s8" sec-type="author-contributions">
<title>Author contributions</title>
<p>Y-HC: Data curation, Writing &#x2013; original draft. W-HC: Conceptualization, Funding acquisition, Writing &#x2013; review &amp; editing.</p>
</sec>
</body>
<back>
<sec id="s9" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was supported by the Ministry of Science and Technology (MOST), Taipei, Taiwan (MOST105-2311-B-001-073; MOST110-2311-B-001-030-MY3).</p>
</sec>
<sec id="s10" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s11" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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