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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2023.1200520</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Climate and fragment area jointly affect the annual dynamics of seedlings in different functional groups in the Thousand Island Lake</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zhong</surname>
<given-names>Yuping</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2270841"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhong</surname>
<given-names>Yuchen</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xie</surname>
<given-names>Yuchu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Lei</surname>
<given-names>Yanping</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wei</surname>
<given-names>Boliang</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2301919"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Jinliang</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2158897"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Yu</surname>
<given-names>Mingjian</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/903567"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>College of Life Sciences, Zhejiang University</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Hangzhou Xuejun High School</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Wuyanling National Nature Reserve Administration of Zhejiang</institution>, <addr-line>Wenzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>College of Life and Environmental Science, Wenzhou University</institution>, <addr-line>Wenzhou</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Runguo Zang, Chinese Academy of Forestry, China</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Chengjin Chu, Sun Yat-sen University, China; Enrong Yan, East China Normal University, China; Zhanqing Hao, Northwestern Polytechnical University, China</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Mingjian Yu, <email xlink:href="mailto:fishmj@zju.edu.cn">fishmj@zju.edu.cn</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>14</day>
<month>06</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1200520</elocation-id>
<history>
<date date-type="received">
<day>05</day>
<month>04</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>22</day>
<month>05</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Zhong, Zhong, Xie, Lei, Wei, Liu and Yu</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Zhong, Zhong, Xie, Lei, Wei, Liu and Yu</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Habitat fragmentation and climate change are the two main threats to global biodiversity. Understanding their combined impact on plant community regeneration is vital for predicting future forest structure and conserving biodiversity. This study monitored the seed production, seedling recruitment and mortality of woody plants in the Thousand Island Lake, a highly fragmented anthropogenic archipelago, for 5 years. We analyzed the seed-seedling transition, seedling recruitment and mortality of different functional groups in the fragmented forests and conducted correlation analyses involving climatic factors, island area, and plant community abundance. Our results showed that: 1) shade-tolerant and evergreen species had higher seed-seedling transition, seedling recruitment and survival rate than shade-intolerant and deciduous species in time and space, and these advantages increased with the island area. 2) Seedlings in different functional groups responded differently to island area, temperature and precipitation. 3) Increasing active accumulated temperature (the sum of the mean daily temperature above 0 &#xb0;C) significantly increased seedling recruitment and survival, and warming climate favored the regeneration of evergreen species. 4) The seedling mortality rate of all plant functional groups increased with the increase of island area, but the increasing strength weakened significantly with the increase of the annual maximum temperature. These results suggested that the dynamics of woody plant seedlings varied among functional groups, and can be regulated separately and jointly by fragmentation and climate.</p>
</abstract>
<kwd-group>
<kwd>fragmentation</kwd>
<kwd>species coexistence</kwd>
<kwd>habitat filtering</kwd>
<kwd>regeneration niche difference</kwd>
<kwd>seed-to-seedling transition</kwd>
<kwd>seedling recruitment</kwd>
<kwd>seedling survival</kwd>
</kwd-group>
<counts>
<fig-count count="4"/>
<table-count count="1"/>
<equation-count count="4"/>
<ref-count count="95"/>
<page-count count="11"/>
<word-count count="5040"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Functional Plant Ecology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>Species diversity varies across time and space, and studying species diversity and its driving factors is a primary goal of ecology (<xref ref-type="bibr" rid="B78">Rosenzweig and Rosenzweig, 1995</xref>). Globally, at least half of natural habitats have been lost (<xref ref-type="bibr" rid="B27">Diversity, S.o.t.C.o.B, 2020</xref>), and the remaining habitat fragments are usually small (<xref ref-type="bibr" rid="B59">Liu et&#xa0;al., 2019a</xref>), suffering from edge effect. Meanwhile, the climate is changing into a warmer and drier condition, which is potentially affecting forest regeneration and seedling dynamics (<xref ref-type="bibr" rid="B11">Bond-Lamberty et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B43">Ibanez et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B3">Badano and S&#xe1;nchez-Montes de Oca, 2022</xref>). Edge effect follow by fragmentation can cause increasing temperature extremes and a drier microclimate inside small fragments (<xref ref-type="bibr" rid="B81">Saunders et&#xa0;al., 1991</xref>; <xref ref-type="bibr" rid="B23">Debinski and Holt, 2000</xref>), enhancing the influence of climate change on seedling dynamics. However, there is still limited research considering the potential interactive effects of climate and fragmentation on plant community dynamics (<xref ref-type="bibr" rid="B71">Opdam and Wascher, 2004</xref>; <xref ref-type="bibr" rid="B65">Mantyka-Pringle et&#xa0;al., 2011</xref>).</p>
<p>Seedlings face various abiotic and biotic factors that significantly reduce their recruitment and survival rates (<xref ref-type="bibr" rid="B36">Harper, 1977</xref>; <xref ref-type="bibr" rid="B58">Leck et&#xa0;al., 1989</xref>; <xref ref-type="bibr" rid="B70">Moles and Westoby, 2004</xref>). The seedling stage is considered a critical bottleneck in population growth rate due to high mortality rates (<xref ref-type="bibr" rid="B35">Grubb, 1977</xref>; <xref ref-type="bibr" rid="B36">Harper, 1977</xref>). The success of seedling recruitment, survival and establishment is essential to plant population dynamics and ultimately affects the composition and sustainability of the community (<xref ref-type="bibr" rid="B35">Grubb, 1977</xref>; <xref ref-type="bibr" rid="B85">Swaine, 1996</xref>; <xref ref-type="bibr" rid="B4">Baeten et&#xa0;al., 2009</xref>). Therefore, understanding seedling dynamics is crucial in predicting short-term changes of plant communities in a fragmented landscape (<xref ref-type="bibr" rid="B13">Bykova et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B79">Rother et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B52">Kroiss and Hillerslambers, 2015</xref>).</p>
<p>Fragmented habitats are usually relatively small in size, creating many edges that alter the microclimate in various ways that impairs the regeneration of certain tree species (<xref ref-type="bibr" rid="B35">Grubb, 1977</xref>; <xref ref-type="bibr" rid="B85">Swaine, 1996</xref>; <xref ref-type="bibr" rid="B87">Tabarelli et&#xa0;al., 2005</xref>). Small fragments tend to suffer from more severe edge effects, resulting in less humidity, more light resources, and greater temperature changes, which can penetrate up to 60 m inside the fragments (<xref ref-type="bibr" rid="B49">Kapos, 1989</xref>). Studies found that fragmentation has changed the regeneration dynamics of vegetation community (<xref ref-type="bibr" rid="B94">Wilcox and Murphy, 1985</xref>; <xref ref-type="bibr" rid="B80">Sarmiento, 1997</xref>; <xref ref-type="bibr" rid="B91">Turner et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B55">Laurance et&#xa0;al., 2000</xref>), leading to the transformation of the seedling community to species-poor composition, threatening forest biodiversity (<xref ref-type="bibr" rid="B9">Benitez-Malvido and Martinez-Ramos, 2003</xref>). Furthermore, the defaunation of large animals caused by habitat loss can potentially alter important biotic interactions, such as seed predation and seedling herbivory (<xref ref-type="bibr" rid="B37">Harrison et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B26">Dirzo et&#xa0;al., 2014</xref>).</p>
<p>Climate can also alter the emergence and establishment of tree seedlings. For instance, species with shallow-rooted seedlings may experience limited seed germination and increased seedling mortality during drought (<xref ref-type="bibr" rid="B17">Clark et&#xa0;al., 2016</xref>). Higher temperatures and lower precipitation levels can intensify seed predation (<xref ref-type="bibr" rid="B68">McKone et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B39">Hillyer and Silman, 2010</xref>), altering the water and carbon balance of tree seedlings, resulting in a reduced seedling emergence (<xref ref-type="bibr" rid="B48">Joet et&#xa0;al., 2013</xref>) and impair their establishment (<xref ref-type="bibr" rid="B73">Perez-Ramos et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B74">Perez-Ruiz et&#xa0;al., 2018</xref>). Studies have shown that variations in climatic conditions lead to interannual fluctuations in the quality of microhabitat of seedling recruitment (<xref ref-type="bibr" rid="B34">Greenlee and Callaway, 1996</xref>; <xref ref-type="bibr" rid="B90">Tielborger and Kadmon, 2000</xref>; <xref ref-type="bibr" rid="B44">Ibanez and Schupp, 2001</xref>).</p>
<p>With the intensification of climate change and fragmentation, the interaction of these two main disturbances on altering the regeneration process of communities is attracting attention. Their combined impacts may have hidden effects that are not evident when studied in isolation. It was found that the fragment area affects the size and composition of the soil seed bank (<xref ref-type="bibr" rid="B84">Sousa et&#xa0;al., 2017</xref>), and successful seed dispersal, seedling germination and survival are limited by the fragmentation of suitable habitats (<xref ref-type="bibr" rid="B75">Pitelka and the Plant Migration Workshop Group, 1997</xref>; <xref ref-type="bibr" rid="B77">Renton et&#xa0;al., 2013</xref>) and are directly affected by climate change. Due to the different seedling dynamics of different tree species (e.g., functional groups) and their response to climate change, habitat fragmentation can interact with climate on seedling dynamics by affecting soil seed banks (and microenvironments). However, limited by field research platforms and systems and the accumulation of long-term monitoring data, few people pay attention to the combined effects of habitat fragmentation and climate change (<xref ref-type="bibr" rid="B71">Opdam and Wascher, 2004</xref>).</p>
<p>The maintenance of species diversity is the central question of community ecology, which concerns the coexistence of large numbers of species (<xref ref-type="bibr" rid="B42">Hutchinson, 1961</xref>; <xref ref-type="bibr" rid="B38">Hart et&#xa0;al., 2017</xref>). Regeneration niche differentiation in early stages of seedling germination and establishment, and negative density dependent (NDD) are two important mechanisms to explain species coexistence and biodiversity maintenance (<xref ref-type="bibr" rid="B46">Janzen, 1970</xref>; <xref ref-type="bibr" rid="B20">Connell, 1971</xref>; <xref ref-type="bibr" rid="B35">Grubb, 1977</xref>; <xref ref-type="bibr" rid="B25">Denslow, 1980</xref>; <xref ref-type="bibr" rid="B5">Bagchi et&#xa0;al., 2014</xref>). Along the gradient of environmental resources, changes in seedling survival rates and growth rates of different functional groups will lead to their regeneration niche differentiation (<xref ref-type="bibr" rid="B35">Grubb, 1977</xref>) and promote species coexistence at the landscape level (<xref ref-type="bibr" rid="B63">Macarthur and Levins, 1967</xref>; <xref ref-type="bibr" rid="B15">Chesson, 2000</xref>). Local scale NDD can result in community compensatory trend (CCT), which describes the negative relationship between species abundance and population growth rate at the community level. CCT prevents common species from overtaking the ecological niche of rare species, thereby promoting their coexistence (<xref ref-type="bibr" rid="B21">Connell et&#xa0;al., 1984</xref>).</p>
<p>The growth and regeneration dynamics of different plant functional groups with different resource requirements are affected by the level of light and other resources, which differ between internal and marginal forests. Base on their light tolerance, plants can be classified as shade-tolerant (ST) and shade-intolerant (SI) species, and as evergreen (EG) and deciduous (DC) species based on their leaf habit. Usually, the light intensity in large patches and internal forests is very low due to the closed canopy, which is very similar to an intact habitat. As fragment area decreases, the light intensity gradually increases, limiting the regeneration of ST species. DC and EG species commonly coexist in subtropical EG broad-leaved forests, although a longer growing season should favor species with long leaf lifespans (<xref ref-type="bibr" rid="B32">Givnish, 2002</xref>). Some studies have proposed the heterogeneity of topography (<xref ref-type="bibr" rid="B88">Tang and Ohsawa, 2002</xref>; <xref ref-type="bibr" rid="B31">Fang et&#xa0;al., 2017</xref>) and light intensity may cause niche differentiation of EG and DC species and promote their coexistence (<xref ref-type="bibr" rid="B47">Jin et&#xa0;al., 2018</xref>). Compared with DC species, seedlings of EG species are usually more shade-tolerant (<xref ref-type="bibr" rid="B92">Wang et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B6">Baldocchi et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B50">Kitajima et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B47">Jin et&#xa0;al., 2018</xref>), and previous research have found that small fragments and forest edges tend to have more SI and DC species (<xref ref-type="bibr" rid="B83">Slik et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B86">Tabarelli et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B60">Liu et&#xa0;al., 2019c</xref>). The species and functional composition of forest communities change with the fragmentation and forest successional stage (<xref ref-type="bibr" rid="B56">Laurance et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B83">Slik et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B51">Kooyman et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B66">Martin et&#xa0;al., 2014</xref>). Since it may be the most relative demographic information to predict future forest composition and succession processes, however, there is still very little research on the regeneration dynamics of secondary forests over time and space in fragmented landscapes.</p>
<p>To better understand the mechanism of plant diversity under climate and habitat fragmentation, it is necessary to explore the differences in regeneration dynamics and their driving factors between different functional groups in fragmented forests. Our research focused on secondary forests in the Thousand Island Lake. In this study, we aim to explore the seedling dynamic differences between different functional groups, and analyze how climate change and fragmentation influence these patterns. Specifically, we answer the following questions: 1) Do seedlings of ST and EG species exhibit higher demographic advantages on larger islands compared with SI and DC species? 2) Does it have significant effects on the seedling dynamics of different functional groups? 3) Is there an interaction between climate change and fragmentation on seedling dynamics?</p>
</sec>
<sec id="s2">
<label>2</label>
<title>Methods</title>
<sec id="s2_1">
<label>2.1</label>
<title>Study site</title>
<p>The study was conducted on islands in the Thousand Island Lake of Zhejiang Province, China (29&#xb0;22&#x2032;&#x2013; 29&#xb0;50&#x2032;N and 118&#xb0;34&#x2032;&#x2013; 119&#xb0;15&#x2032;E). The lake is a hydroelectric reservoir formed by the construction of the Xin&#x2019;an River Dam in 1959. After that, the valley (around 573 km<sup>2</sup>) was flooded, forming more than 1,000 land- bridge islands larger than 0.25 ha (<xref ref-type="bibr" rid="B95">Yu et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B62">Liu et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B41">Hu et&#xa0;al., 2021</xref>). Forests were clear- cut before the construction. After 60 years of succession, most of these islands are now covered by secondary forests dominated by Masson pine (<italic>Pinus massoniana</italic>) and mixed broad- leaved species (<xref ref-type="bibr" rid="B61">Liu et&#xa0;al., 2019b</xref>). The climatic conditions of the study site are typical of the central subtropical climate zone, with an average annual temperature of 17.0&#xb0;C (the daily temperature ranges from -7.6 &#xb0;C in January to 41.8 &#xb0;C in July) and an average annual precipitation of 1,430 mm (<xref ref-type="bibr" rid="B40">Hu et&#xa0;al., 2011</xref>).</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Tree, seed and seedling census</title>
<p>From 2009 to 2010, we established a long-term plant community monitoring site of 12.7 ha on 29 sample islands spanning available variation in area (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). Quadrats were set all over the islands with area smaller than 1 ha. One to several transects with a wide of 20-40 m were set on islands with area larger than 1 ha, and the total area of transects were designed based on its island area. We defined islands with area smaller than 1 ha as &#x2018;small island&#x2019; (s), area larger than 1 ha but smaller than 10 ha as &#x2018;medium island&#x2019; (m), and area larger than 10 ha as &#x2018;large island&#x2019; (l). Woody plants with DBH above 1 cm were investigated and recorded, and the first census was completed in 2014-2015. The second census was completed in 2019. Community abundance refers to the number of individual of species on each island, which was calculated based on this census.</p>
<p>Seedling plots were set base on random sampling by classification. Within each sample island, 1 m&#xd7;1 m seedling plots were randomly set from the edge to the interior on island, and the interval between plots was at least 5 m. The seedling plots evenly covered different edge gradients from the edge to the center of the transect, to fully understand the composition and dynamics of the seedling communities on the island. A total of 499 seedling plots have been set up (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). In April 2017, all woody seedlings in the seedling plots were tagged with a unique number, identified to species and then mapped. The census was conducted in April and September each year from 2018-2022. During each census, we counted and identified all the seedlings in the plot, measured their height and counted their leaf number. newly recruited seedlings were tagged, and missing seedlings were recorded as &#x2018;dead&#x2019;. Here, &#x2018;seedlings&#x2019; refer to plants with DBH&lt; 1 cm and height&lt; 20 cm (<xref ref-type="bibr" rid="B19">Comita et&#xa0;al., 2007</xref>).</p>
<p>A total of 240 seed-traps of 0.5 m<sup>2</sup> were set up, and each trap was located 2 meters away from the seedling plot. Since the seedling recruitment rate is calculated based on the data of the seedling of the current year and the seed rain of the previous year (<xref ref-type="bibr" rid="B72">Pe&#xf1;a-Domene et&#xa0;al., 2016</xref>), fruits and seeds in the seed-traps were collected monthly from January 2017 to December 2021. After drying, they were identified to species, counted and weighed. Numbers of seedling plots and seed-traps set on each island are listed in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table</bold>
</xref> (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>).</p>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>Climate data</title>
<p>The monthly climate data were obtained from the nearest Chun &#x2018;an Meteorological Station (located approximately 17 km north-east of the study site). We calculated 6 climate indexes, including the annual maximum temperature (<italic>T<sub>max</sub>
</italic>), the annual minimum temperature, the annual mean temperature, the annual active accumulated temperature (The sum of temperatures &#x2265;0&#xb0;C, <italic>T<sub>active</sub>
</italic>), the annual precipitation (<italic>P</italic>
<sub>total</sub>) and the sunshine duration.</p>
</sec>
<sec id="s2_4">
<label>2.4</label>
<title>Calculations for dynamic index</title>
<p>The shade tolerance and leaf habit of all species were derived from the results of previous studies conducted in the TIL (<xref ref-type="bibr" rid="B89">Tian et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B40">Hu et&#xa0;al., 2011</xref>), and indexed through the Flora of China (FOC, <ext-link ext-link-type="uri" xlink:href="http://www.iplant.cn/foc">http://www.iplant.cn/foc</ext-link>) website. In total, we conducted 50 plant species, Overall, there were 22 EG species, 28 DC species, 22 SI species and 28 ST species (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S2</bold>
</xref>). Since the evolutionary history of gymnosperms is much longer than that of angiosperms, the response of certain functional traits in angiosperms cannot be extrapolated to gymnosperms (<xref ref-type="bibr" rid="B1">Aiba et&#xa0;al., 2016</xref>). Including both gymnosperms and angiosperms in our analysis may obscure the overall pattern. Therefore, 3 gymnosperms species were excluded from the main analysis. An analysis of gymnosperms species that were not excluded was also carried out and showed in the supplement (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figures S1&#x2013;S4</bold>
</xref>).</p>
<p>The ratio of seeds to seedlings (seed effectiveness; &#x3a6;<sub>i</sub>) is the number of seeds of species i needed for 1 recruit (<xref ref-type="bibr" rid="B72">Pe&#xf1;a-Domene et&#xa0;al., 2016</xref>). Here, we defined the seed-seedling transition rate as the number of seedlings of the species i successfully germinated from 1 seed:</p>
<disp-formula>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:msub>
<mml:mi>T</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>r</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
<mml:mo>&#xd7;</mml:mo>
<mml:msub>
<mml:mi>S</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<p>where <inline-formula>
<mml:math display="inline" id="im1">
<mml:mrow>
<mml:msub>
<mml:mi>S</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>is the total number of seeds of species i that fall in the trap of a habitat, <inline-formula>
<mml:math display="inline" id="im2">
<mml:mrow>
<mml:msub>
<mml:mi>r</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>is the total number of recruits of species i in a habitat, and <inline-formula>
<mml:math display="inline" id="im3">
<mml:mi>A</mml:mi>
</mml:math>
</inline-formula>is the seedling plot area (m<sup>2</sup>) sampled in a habitat divided by the area sampled by seed traps in a habitat.</p>
<p>The seedling recruitment rate is the number of seedlings that appeared on the ground for the first time during the census divided by the total number of seedlings that appeared during the last census:</p>
<disp-formula>
<mml:math display="block" id="M2">
<mml:mrow>
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>r</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<p>The seedling mortality rate:</p>
<disp-formula>
<mml:math display="block" id="M3">
<mml:mrow>
<mml:msub>
<mml:mi>M</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<p>where <inline-formula>
<mml:math display="inline" id="im4">
<mml:mrow>
<mml:msub>
<mml:mi>M</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>is the seedling mortality rate of species i in a habitat, <inline-formula>
<mml:math display="inline" id="im5">
<mml:mrow>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>is the number of seedlings of species i in a habitat (excluding new recruits), and <inline-formula>
<mml:math display="inline" id="im6">
<mml:mrow>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>is the total number of seedlings of species i in a habitat during the last census.</p>
</sec>
<sec id="s2_5">
<label>2.5</label>
<title>Statistical analysis</title>
<p>The Wilcoxon test was used to test the differences in seedling dynamics on different islands, using &#x2018;wilcoxon_test&#x2019; function in package &#x2018;rstatix&#x2019;.</p>
<p>The correlation between 6 year-level climate variables pairwise was calculated using the function &#x2018;cor&#x2019;, and then the &#x2018;findCorrelation&#x2019; function in the package &#x2018;caret&#x2019; was used to remove variables with a mean absolute correlation value of more than 4. Three climate variables were selected from six variables, which are <italic>T<sub>max</sub>
</italic>, <italic>P</italic>
<sub>total</sub> and <italic>T<sub>active</sub>
</italic>. The island area refers to the projected area of the island when the water reaches its highest level (105 meters above sea level), which was calculated using ArcGIS software. Log transformation of the island area was performed because the data vary a lot on the relative scale. The fixed effects of the models included three climatic factors (<italic>T<sub>max</sub>
</italic>, <italic>P</italic>
<sub>total</sub> and <italic>T<sub>active</sub>
</italic>), community abundance (<italic>Abun</italic>) and the island area (<italic>Area</italic>), which were scaled and centered using the function &#x2018;scale&#x2019; before regression. Then, we used the General Liner-Mix Model (GLMM) to assess the influence of the 5 predictors on the seedling dynamic index (transition, recruitment or mortality rate) by generating a Template Model Builder (TMB) (package &#x2018;glmmTMB&#x2019;). To account for interspecies differences, the species was considered a random effect in the model. The model was summarized as follows:</p>
<disp-formula>
<mml:math display="block" id="M4">
<mml:mrow>
<mml:mtable>
<mml:mtr>
<mml:mtd>
<mml:msub>
<mml:mi>D</mml:mi>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>0</mml:mn>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>1</mml:mn>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>A</mml:mi>
<mml:mi>b</mml:mi>
<mml:mi>u</mml:mi>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>2</mml:mn>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>A</mml:mi>
<mml:mi>r</mml:mi>
<mml:mi>e</mml:mi>
<mml:msub>
<mml:mi>a</mml:mi>
<mml:mi>j</mml:mi>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>3</mml:mn>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:msub>
<mml:mi>T</mml:mi>
<mml:mrow>
<mml:mi>m</mml:mi>
<mml:mi>a</mml:mi>
<mml:mi>x</mml:mi>
<mml:mo>_</mml:mo>
<mml:mi>k</mml:mi>
<mml:mo>&#xa0;</mml:mo>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
</mml:mtd>
</mml:mtr>
<mml:mtr>
<mml:mtd>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>4</mml:mn>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:msub>
<mml:mi>P</mml:mi>
<mml:mrow>
<mml:mi>t</mml:mi>
<mml:mi>o</mml:mi>
<mml:mi>t</mml:mi>
<mml:mi>a</mml:mi>
<mml:mi>l</mml:mi>
<mml:mo>_</mml:mo>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>5</mml:mn>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:msub>
<mml:mi>T</mml:mi>
<mml:mrow>
<mml:mi>a</mml:mi>
<mml:mi>c</mml:mi>
<mml:mi>t</mml:mi>
<mml:mi>i</mml:mi>
<mml:mi>v</mml:mi>
<mml:mi>e</mml:mi>
<mml:mo>_</mml:mo>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>&#x3c6;</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mtd>
</mml:mtr>
</mml:mtable>
</mml:mrow>
</mml:math>
</disp-formula>
<p>where <inline-formula>
<mml:math display="inline" id="im7">
<mml:mrow>
<mml:msub>
<mml:mi>D</mml:mi>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>is the seedling dynamic (transition, recruitment or mortality rate) of species i in island j in year k. The parameter <inline-formula>
<mml:math display="inline" id="im8">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>0</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>represents the intercept, <inline-formula>
<mml:math display="inline" id="im9">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>1</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>, <inline-formula>
<mml:math display="inline" id="im10">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>2</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>, <inline-formula>
<mml:math display="inline" id="im11">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>3</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>, <inline-formula>
<mml:math display="inline" id="im12">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>4</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>and <inline-formula>
<mml:math display="inline" id="im13">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3b2;</mml:mi>
<mml:mn>5</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>represent the effect of 5 factors, respectively; <inline-formula>
<mml:math display="inline" id="im14">
<mml:mrow>
<mml:msub>
<mml:mi>&#x3c6;</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>&#xa0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>represents the random effect of the species.</p>
<p>To answer whether climate change has modified the effects of fragmentation on seedling dynamics, we used GLMM to quantify the effect of island area on seedling dynamics, and species and census year were considered as random effects. We defined the correlation slope between island area and seedling dynamics as &#x2018;<italic>z</italic>&#x2019; index. The liner regression model (LM) was used to analyze the effects of each climatic factor on the <italic>z</italic>-index, using the census year as the time offset. Since the seedling dynamics are calculated based on the previous year&#x2019;s census data, the inclusion of time offsets can capture the dynamics and dependencies that exist in the time series data. By incorporating a time offset into the model, we can improve the model&#x2019;s ability to make accurate estimates.</p>
<p>All the analyze above were generated in R4.2.1.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results</title>
<sec id="s3_1">
<label>3.1</label>
<title>Temporal and spatial dynamic of seedling</title>
<p>The number of seedling individuals in each functional group showed interannual fluctuations within 5 years. The number of seedling individuals has decreased significantly in 2021-2022 compared with the previous three years (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). Seedling dynamics also showed interannual fluctuations, and the transition rate and mortality rate did not increase or decrease significantly. Seedling recruitment exhibited a decreasing trend (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1B, E</bold>
</xref>). Overall, EG and ST species showed higher transitions and recruitment rates (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1A, B, D, E</bold>
</xref>), and the mortality rate was lower than that of DC and SI species (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1C, F</bold>
</xref>), respectively. The recruitment of EG and DC species has been converging since 2020 (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>). Similar trends were shown in ST and SI species (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1E</bold>
</xref>).</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Total number of seedling individuals of different functional groups on all islands in 5 years.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="center"/>
<th valign="middle" align="center">2018</th>
<th valign="middle" align="center">2019</th>
<th valign="middle" align="center">2020</th>
<th valign="middle" align="center">2021</th>
<th valign="middle" align="center">2022</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">
<bold>Deciduous</bold>
</td>
<td valign="top" align="center">798</td>
<td valign="top" align="center">1089</td>
<td valign="top" align="center">831</td>
<td valign="top" align="center">404</td>
<td valign="top" align="center">387</td>
</tr>
<tr>
<td valign="top" align="left">
<bold>Evergreen</bold>
</td>
<td valign="top" align="center">465</td>
<td valign="top" align="center">594</td>
<td valign="top" align="center">459</td>
<td valign="top" align="center">269</td>
<td valign="top" align="center">246</td>
</tr>
<tr>
<td valign="top" align="left">
<bold>Tolerant</bold>
</td>
<td valign="top" align="center">739</td>
<td valign="top" align="center">955</td>
<td valign="top" align="center">766</td>
<td valign="top" align="center">402</td>
<td valign="top" align="center">349</td>
</tr>
<tr>
<td valign="top" align="left">
<bold>Intolerant</bold>
</td>
<td valign="top" align="center">524</td>
<td valign="top" align="center">728</td>
<td valign="top" align="center">524</td>
<td valign="top" align="center">271</td>
<td valign="top" align="center">284</td>
</tr>
<tr>
<td valign="top" align="left">
<bold>Total</bold>
</td>
<td valign="top" align="center">1263</td>
<td valign="top" align="center">1683</td>
<td valign="top" align="center">1290</td>
<td valign="top" align="center">673</td>
<td valign="top" align="center">633</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Seedling dynamics [seed-seedling transition <bold>(A, D)</bold>, seedling recruitment <bold>(B, E)</bold> and seedling mortality <bold>(C, F)</bold>] from 2018 to 2022.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1200520-g001.tif"/>
</fig>
<p>There was no significant difference in most seedling dynamic index among most island types (<xref ref-type="fig" rid="f2"><bold>Figures 2A&#x2013;C</bold></xref>), except for the seedling mortality rates of DC and SI species between small and medium islands (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2F, I</bold>
</xref>). EG species showed significantly higher transitions and recruitment rates, and lower mortality rate than that of DC species on almost all types of islands (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2D&#x2013;F</bold>
</xref>). ST species showed significantly higher transitions and lower mortality rates than SI species on almost all types of islands (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2G&#x2013;I</bold>
</xref>). The seedling recruitment of ST species was significantly higher than that of SI only on medium islands (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2H</bold>
</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Seedling dynamics [seed-seedling transition <bold>(A, D, G)</bold>, seedling recruitment <bold>(B, E, H)</bold> and seedling mortality <bold>(C, F, I)</bold>] of different functional groups on islands with different area from 2018 to 2022. &#x201c;s&#x201d;, &#x201c;m&#x201d;, and &#x201c;l&#x201d; represent small, medium and large islands, respectively. Seedling dynamic of all species (grey), evergreen (EG, green) and deciduous (DC, yellow) species, Shade-intolerance (SI, red) and shade-tolerance (ST, blue) species were shown. Different letters between functional groups or island types indicated significant differences.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1200520-g002.tif"/>
</fig>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Abiotic and biotic effects on seedling dynamics</title>
<p>Tree abundance had a positive effect on seed-seedling transition rate and seedling recruitment (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3A&#x2013;C</bold>
</xref>). Island area positively affected seedling recruitment of EG and SI species, and increased the mortality rate of EG seedlings (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3D&#x2013;I</bold>
</xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>The relative influence of potential factors [the community abundance (<italic>Abundance</italic>), island area, annual maximum temperature (<italic>T<sub>max</sub>
</italic>), annual precipitation (<italic>P<sub>total</sub>
</italic>) and active accumulated temperature (<italic>T<sub>active</sub>
</italic>)] on the transition <bold>(A, D, G)</bold>, recruitment <bold>(B, E, H)</bold> and mortality <bold>(C, F, I)</bold> rate of seedlings of evergreen(EG, green), deciduous(DC, yellow), shade-intolerat(SI, red), shade-tolerant(ST, blue), and all (black) species. Solid points with asterisk marks indicate a significant effect (significant codes for <italic>p</italic>-value: <italic>p</italic>= 0~ 0.001 &#x201c;***&#x201d;, <italic>p</italic>= 0.001~ 0.01 &#x201c;**&#x201d;, <italic>p</italic>= 0.01~ 0.05 &#x201c;*&#x201d;). If the coefficient value of the explanatory variable is&lt;0, it means a significant negative correlation. The parameter estimate&lt;0 indicated a significant negative effect. The parameter estimate intersects with 0 indicated an insignificant effect. The parameter estimate &gt;0 indicates a significant positive effect.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1200520-g003.tif"/>
</fig>
<p>The increase in <italic>T<sub>active</sub>
</italic> significantly increased the seedling recruitment of DC seedlings and reduced seedling mortality to a greater extent than that of EG species (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3E, F</bold>
</xref>). For all functional groups, the increase in <italic>T<sub>max</sub>
</italic> significantly decreased seedling recruitment, but had no effect on seedling mortality. The increase in <italic>P</italic>
<sub>total</sub> significantly decreased seedling recruitment of DC species and increased seedling mortality in most functional groups (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3E, F, H, I</bold>
</xref>).</p>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Interaction effects of climate and island area on seedling dynamics</title>
<p>The increase rate in seedling mortality with island area weakened significantly with the increase of <italic>T<sub>max</sub>
</italic> in all functional groups. There was a negative correlation between the overall mortality <italic>z</italic> index and <italic>T<sub>max</sub>
</italic> (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4A</bold>
</xref>, slope = -1.431, <italic>R<sup>2</sup>
</italic>=0.324, <italic>p</italic>&lt; 0.05). Same pattern were showed in EG species (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4B</bold>
</xref>, slope = -1.430, <italic>R<sup>2</sup>
</italic>=0.331, <italic>p</italic>&lt; 0.05), DC species (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4C</bold>
</xref>, slope = -1.443, <italic>R<sup>2</sup>
</italic>=0.302, <italic>p</italic>&lt; 0.05), ST species (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4D</bold>
</xref>, slope = -1.425, <italic>R<sup>2</sup>
</italic>=0.325, <italic>p</italic>&lt; 0.05) and SI species (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4E</bold>
</xref>, slope = -1.442, <italic>R<sup>2</sup>
</italic>=0.321, <italic>p</italic>&lt; 0.05). There was no significant correlation between the mortality <italic>z</italic> index and <italic>T<sub>active</sub>
</italic> or precipitation (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4F&#x2013;O</bold>
</xref>, <italic>p</italic>&gt;0.05).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Linear regression correlation between <italic>z</italic>-value and annual maximum temperature (<italic>T<sub>max</sub>
</italic>: <bold>(A&#x2013;E)</bold>, annual precipitation (<italic>P<sub>total</sub>
</italic>: <bold>(F&#x2013;J)</bold>, and the annual active accumulated temperature (<italic>T<sub>active</sub>
</italic>: <bold>(K&#x2013;O)</bold> for all species <bold>(A, F, K)</bold>, evergreen species <bold>(B, G, L)</bold>, deciduous species <bold>(C, H, M)</bold>, shade-tolerant species <bold>(D, I, N)</bold>, and shade-intolerant species <bold>(E, J, O)</bold>. The five points in the panels represent the <italic>z</italic>-index values calculated based on year-level climatic factors during 5 years. To be noted, the <italic>p</italic>-value in this figure was calculated based on the results of LM with time offset.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1200520-g004.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<label>4</label>
<title>Discussion</title>
<p>Our study provides insights into seedling dynamics and the influence of environmental variables on these dynamics in fragmented forests. The results showed that the interaction of climatic factors and island area affected the dynamics of seedlings in different functional groups, which can explain the composition patterns of plant communities. The joint effects of climate change and fragmentation can continue to shape the community structure and local biodiversity of the area.</p>
<p>In this research, seedling dynamics showed interannual fluctuations. EG and DC seedlings, ST and SI seedlings showed very similar mortality and recruitment trend in space and time, but EG and ST species showed higher seed-seedling transition, recruitment and survival rate over DC and SI species in most island types and most years, suggesting that they have a competitive advantage in the early life stage. This is consistent with previous research, showing that EG seedlings have a regenerative advantage over DC seedlings (<xref ref-type="bibr" rid="B47">Jin et&#xa0;al., 2018</xref>), the same as ST over SI (<xref ref-type="bibr" rid="B89">Tian et&#xa0;al., 2016</xref>). With the progress of community succession, EG species and ST species may gradually develop into dominant species in the area.</p>
<p>Island area significantly affected seedling mortality and recruitment. The island area had no effect on the seed- seedling transition, but it had a positive impact on the seedling recruitment and mortality of EG species, and also on the seedling recruitment of ST species. Small forest fragments are suffering from more severe edge effect than large fragments, with greater temperature and low humidity (<xref ref-type="bibr" rid="B57">Laurance and Yensen, 1991</xref>; <xref ref-type="bibr" rid="B64">Malcolm, 1994</xref>; <xref ref-type="bibr" rid="B30">Fahrig, 2003</xref>; <xref ref-type="bibr" rid="B29">Ewers and Didham, 2006</xref>; <xref ref-type="bibr" rid="B76">Porensky, 2011</xref>; <xref ref-type="bibr" rid="B54">Laurance et&#xa0;al., 2018</xref>). These conditions compromise seed-seedling transition and seedling establishment of ST species (<xref ref-type="bibr" rid="B8">Benitez-Malvido, 1998</xref>; <xref ref-type="bibr" rid="B12">Bruna, 1999</xref>; <xref ref-type="bibr" rid="B33">Gonz&#xe1;lez-Di Pierro et&#xa0;al., 2011</xref>), causing small fragments to have fewer ST species (<xref ref-type="bibr" rid="B83">Slik et&#xa0;al., 2008</xref>). Combined with the spatiotemporal seedling dynamics of EG and DC species, it is predicted that the increase in habitat area may favor the regeneration of EG and ST species, which may g radually lead to their dominant position in the community. Thus, habitat loss followed by fragmentation may suppress the regeneration of EG and ST species, limiting their potential to become dominant species.</p>
<p>Temperature and precipitation significantly affect seedling recruitment and mortality, but the response varied across different functional groups. We found that higher <italic>T<sub>active</sub>
</italic>, lower <italic>T<sub>max</sub>
</italic> and precipitation significantly increased the seedling recruitment and survival. This result indicates that extremely high temperatures can reduce the seedling recruitment, but warming with smaller seasonal temperature changes can potentially increase seedling recruitment and survival rate as increase of the active accumulated temperature may prolong the growth time of seedlings. This is partially in line with the finding saying that increased warming and drought may potentially decrease seedling germination, emergence and establishment (<xref ref-type="bibr" rid="B43">Ibanez et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B3">Badano and S&#xe1;nchez-Montes de Oca, 2022</xref>). Studies have found that warmer and drier conditions can reduce the survival of tree seedlings by altering the water and carbon balance (<xref ref-type="bibr" rid="B74">Perez-Ruiz et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B3">Badano and S&#xe1;nchez-Montes de Oca, 2022</xref>). But some researches have also found that the seedling mortality rate of some species has declined with warming (<xref ref-type="bibr" rid="B16">Chidumayo, 2008</xref>). Hence, the seedling dynamics response to climate warming varies from species and region to region. Higher levels of precipitation also increased seedling mortality. The increase in mortality with the increase of precipitation may be caused by its promotion of pathogen and herbivory damage to seedlings, as found in previous research (<xref ref-type="bibr" rid="B69">Milici et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B28">Ebeling et&#xa0;al., 2021</xref>).</p>
<p>The results also showed that seedlings in different functional groups responded differently to climate factors. As found in previous studies, distributions of EG and DC tree species are determined by precipitation and temperature (<xref ref-type="bibr" rid="B7">Barbosa et&#xa0;al., 2014</xref>), and elevated temperatures enhanced the growth of DC trees more than that of EG trees (<xref ref-type="bibr" rid="B93">Way and Oren, 2010</xref>; <xref ref-type="bibr" rid="B7">Barbosa et&#xa0;al., 2014</xref>). Our results also showed similar results. We found that increasing <italic>T<sub>active</sub>
</italic> promoted the seedling recruitment of DC species and reduced their mortality to a greater extent compared with EG species.</p>
<p>However, we did not detect CCT in community level in the study. Our results showed that species abundance significantly increased the overall seed-seedling transition and seedling recruitment. This suggested that species with higher abundance in the community have a better advantage in germination and recruitment success, which does not support CCT. However, some other studies have also found significant positive relationships between seedling survival and adult conspecific density (<xref ref-type="bibr" rid="B45">Inman-Narahari et&#xa0;al., 2016</xref>). Studies found that in the case of warming climate, the negative density effect in seedling survival becomes positive (<xref ref-type="bibr" rid="B2">Bachelot et&#xa0;al., 2020</xref>). The stress gradient hypothesis (SGH) (<xref ref-type="bibr" rid="B10">Bertness and Callaway, 1994</xref>) predicts that interspecific species interactions should shift from negative to positive with environmental stress, and similar shifts have been found in intraspecific interactions, which can explain the regenerative advantages of abundant species in this region with fragmentation as an important stressor.</p>
<p>Most importantly, our study suggests that the increase rate in mortality with island area weakens significantly as the annual maximum temperature increases. Fragmentation can exacerbate the effects of climate change on plant and animal communities through various mechanisms (<xref ref-type="bibr" rid="B22">Davies et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B30">Fahrig, 2003</xref>). If the potential joint impacts are greater than the individually estimated impacts, separate research on climate change and fragmentation may be misleading (<xref ref-type="bibr" rid="B24">De Chazal and Rounsevell, 2009</xref>). However, the joint effects of these two driving mechanisms are not well understood. In our results, although there was no direct significant effect of <italic>T<sub>max</sub>
</italic> on seedling mortality, our study did find a negative correlation between mortality <italic>z</italic>-index and <italic>T<sub>max</sub>
</italic>, indicating that higher temperatures could either increase seedling mortality in smaller islands or mitigate it in larger islands. In large fragments, a closed canopy can increase seedling mortality by reducing light penetration (<xref ref-type="bibr" rid="B67">Matlack, 1994</xref>; <xref ref-type="bibr" rid="B14">Camargo and Kapos, 1995</xref>) as well as increasing litterfall and debris that may damage seedlings (<xref ref-type="bibr" rid="B18">Coley et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B82">Sizer, 1992</xref>; <xref ref-type="bibr" rid="B8">Benitez-Malvido, 1998</xref>). Small islands generally have a more open canopy and a higher proportion of edge area. Additionally, smaller islands are usually drier and warmer, making them more susceptible to external climate change (<xref ref-type="bibr" rid="B53">Laurance, 2004</xref>). Consequently, the increase in <italic>T<sub>max</sub>
</italic> may have a greater negative impact on seedling survival on relatively small islands compared to large islands. Considering the projected increase in high maximum temperatures in the future, we anticipate that the negative effect of high maximum temperatures on the seedling survival on small fragments may offset their survival advantage over large fragments. This is consistent with a previous meta-analysis, indicating that the effects of habitat loss and fragmentation are most pronounced in areas with high maximum temperatures (<xref ref-type="bibr" rid="B65">Mantyka-Pringle et&#xa0;al., 2011</xref>).</p>
<p>However, this study still has some limitations. Our study did not explore how the interaction of climatic factors and island area influences the local environment or identify direct factors affecting seedling regeneration. Climate parameters were based on regional scales, while seedling demographic dynamics were based on island scales or even plot scales. This will probably mask a lot of real variations and real environmental filtering effects. Future research should give priority to monitoring the microenvironment (light, water, temperature) of seedlings to further understand the relationship between climate change, island area, island microhabitat and seedling dynamics.</p>
</sec>
<sec id="s5" sec-type="conclusions">
<label>5</label>
<title>Conclusions</title>
<p>In conclusion, this study provides insights into seedling dynamics and the effects of environmental variables on these dynamics in fragmented forests. The results suggest that shade tolerance of species, island area, and climate variables, such as temperature and precipitation, significantly influence the seedling dynamics of woody plants. More importantly, we found that fragmentation and temperature jointly affect seedling mortality. These findings can provide important implications for understanding the basic mechanisms of plant community dynamics, and can give informations for management strategies aimed at promoting the regeneration of plant communities in fragmented habitats.</p>
</sec>
<sec id="s6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>, further inquiries can be directed to the corresponding author/s.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>YPZ, YCZ, YL collected the data. YPZ conducted the formal analysis, wrote and prepared the original draft.; YPZ, JL, BW, YX, YL, and MY reviewed and edited. Supervision and funding acquisition, MY. All authors have read and agreed to the published version of the manuscript.</p>
</sec>
</body>
<back>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>Supported by The National Natural Science Foundation of China (#31930073, #32030066, #32271606); "Pioneer" and "Leading Goose" R&amp;D Program of Zhejiang (#2023C03137, #2022C02053).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We thank Juan Liu, Tinghao Jing for data analyzing instructions, and other lab mates of Zhejiang University who took part in the field works. We thank Donghao Wu for his constructive comments and suggestions to article revising. We also thank the Xin'an River Ecological Development Corporation, Chun'an Forestry Bureau and Chun'an Thousand Island Lake Forestry Farm for their strong support for this study.</p>
</ack>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fpls.2023.1200520/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fpls.2023.1200520/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet_1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
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