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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2023.1137214</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Axenic <italic>in vitro</italic> cultivation and genome diploidization of the moss <italic>Vesicularia montagnei</italic> for horticulture utilization</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Hu</surname>
<given-names>Yong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2242383"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Qing</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Zexi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2162281"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xu</surname>
<given-names>Zhanwu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Hongyu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wen</surname>
<given-names>Congfa</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Duan</surname>
<given-names>Liu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2043724"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Yang</surname>
<given-names>Hong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2144199"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Liu</surname>
<given-names>Li</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1854914"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-Resources, Hubei Key Laboratory of Industrial Biotechnology, School of Life Sciences, Hubei University</institution>, <addr-line>Wuhan, Hubei</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences</institution>, <addr-line>Kunming</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>University of Chinese Academy of Sciences</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Lishui Runsheng Moss Technology Co., Ltd. Green Valley Information Industrial Park</institution>, <addr-line>Lishui, Zhejiang</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Sangram K. Lenka, Gujarat Biotechnology University, India</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Aneta Sabovljevic, University of Belgrade, Serbia; Lei Wang, Kunming Institute of Botany (CAS), China</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Li Liu, <email xlink:href="mailto:liuli2020@hubu.edu.cn">liuli2020@hubu.edu.cn</email>
</p>
</fn>
<fn fn-type="equal" id="fn003">
<p>&#x2020;These authors have contributed equally to this work</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Plant Biotechnology, a section of the journal Frontiers in Plant Science</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>20</day>
<month>03</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1137214</elocation-id>
<history>
<date date-type="received">
<day>04</day>
<month>01</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>06</day>
<month>03</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Hu, Li, Chen, Xu, Li, Wen, Duan, Yang and Liu</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Hu, Li, Chen, Xu, Li, Wen, Duan, Yang and Liu</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Mosses are widely used in the establishment of greenery. However, little research has been conducted to choose a suitable species or improve their performance for this application. In our study, we examined <italic>Vesicularia montagnei</italic> (<italic>V. montagnei</italic>), a robust moss that is widely distributed in temperate, subtropical, and tropical Asia with varying environmental conditions. Axenic cultivation system of <italic>V. montagnei</italic> was developed on modified BCD medium, which enabled its propagation and multiplication <italic>in vitro</italic>. In this axenic cultivation environment, several diploid <italic>V. montagnei</italic> lines with enhancement of rhizoid system were generated through artificial induction of diploidization. Transcriptomic analysis revealed that several genes responsible for jasmonic acid (JA) biosynthesis and signaling showed significant higher expression levels in the diploid lines compared to the wild type. These results are consistent with the increasement of JA content in the diploid lines. Our establishment of the axenic cultivation method may provide useful information for further study of other <italic>Vesicularia</italic> species. The diploid <italic>V. montagnei</italic> lines with improved rhizoid system may hold promising potential for greenery applications. Additionally, our study sheds light on the biosynthesis and functions of JA in the early landed plants.</p>
</abstract>
<kwd-group>
<kwd>diploidization</kwd>
<kwd>moss</kwd>
<kwd>cultivation</kwd>
<kwd>horticulture</kwd>
<kwd>Vesicularia montagnei</kwd>
</kwd-group>    <contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content>
</contract-sponsor>
<counts>
<fig-count count="6"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="58"/>
<page-count count="11"/>
<word-count count="4869"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Mosses are increasingly being used in the development of greenery in city buildings and indoor environments. The green landscape in cities has beneficial impact on psychological well-being because lacking of vegetation in cities may lead to lower social and mental health issues (<xref ref-type="bibr" rid="B28">Kuo and Sullivan, 2001</xref>). In addition to these benefits, mosses do not need fertilizer or pesticides compared with the flowering or vascular plants, making them easy to maintain (<xref ref-type="bibr" rid="B27">Julinova and Beckovsky, 2019</xref>). Furthermore, mosses can survive long periods of drought stress and can regenerate once they get moist again. Giving these advantages, mosses are becoming more and more popular for use in designing natural living landscapes in urban buildings and indoor environments. This includes the use of moss in vertical gardens, moss walls (<xref ref-type="bibr" rid="B47">Udawattha et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B33">Perini et&#xa0;al., 2022</xref>), green roofs (<xref ref-type="bibr" rid="B4">Anderson et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B16">Cruz de Carvalho et&#xa0;al., 2019</xref>), and bio-walls. Mosses growing on flexible materials can also be cut into customized shapes, logos, or art ornaments for indoor decoration or micro-landscape design (<xref ref-type="bibr" rid="B27">Julinova and Beckovsky, 2019</xref>).</p>    <p>Although the utilization of mosses in the greenery establishment was widely reported (<xref ref-type="bibr" rid="B22">Gunawardena and Steemers, 2019</xref>; <xref ref-type="bibr" rid="B33">Perini et&#xa0;al., 2022</xref>), the source of moss materials remains to be a challenge. The selected moss species collected from the wild may not be homogeneous and may contain other unknown organisms that could be harmful to humans, because moss layers are important habitats for periphyton and invertebrates (<xref ref-type="bibr" rid="B52">Wulf and Pearson, 2017</xref>). Furthermore, a vast amount of disruption of the wild moss layer may lead to land degradation (<xref ref-type="bibr" rid="B1">Adessi et&#xa0;al., 2021</xref>). Thus, artificial planting is the most sustainable way to obtain moss materials. Previous studies have reported on the axenic cultivation of various moss species for research purposes (<xref ref-type="bibr" rid="B12">Collier and Hughes, 1982</xref>; <xref ref-type="bibr" rid="B15">Cove et&#xa0;al., 2009b</xref>), commercial applications (<xref ref-type="bibr" rid="B57">Zhao et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B24">Heck et&#xa0;al., 2021</xref>) and rare taxa conservation (<xref ref-type="bibr" rid="B44">Sabovljevi&#x107; et&#xa0;al., 2012b</xref>; <xref ref-type="bibr" rid="B41">Sabovljevi&#x107; et&#xa0;al., 2022</xref>). However, to date, there is no report on the cultivation of <italic>V</italic>. <italic>montagnei</italic>.</p>
<p>These applications of mosses for establishing greenery requires a strong root-like system that can attach to the supporting surfaces. However, unlike vascular plants with a root system, mosses only possess root-like structures called rhizoids, which provide less adhesive ability. This limitation restricts their use in urban greenery establishment, particularly in the vertical applications. To overcome this issue, promising solutions include screening and selecting specific moss species suitable for this application or breeding new moss lines using biotechnological approaches.</p>
<p>Polyploidy refers to the presence of more than two haploid genomes in a single nucleus of an organism. This phenomenon is considered a potent evolutionary force that drives genetic variation and functional novelty (<xref ref-type="bibr" rid="B32">Paun et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B25">Hegarty and Hiscock, 2008</xref>). Polyploidization has been proven to be a useful biotechnology and is wildly used to improve agronomic traits of horticultural crops, such as <italic>Citrus</italic> (<xref ref-type="bibr" rid="B2">Aleza et&#xa0;al., 2009</xref>), <italic>Lycium</italic> (<xref ref-type="bibr" rid="B38">Rao et&#xa0;al., 2020</xref>), and <italic>Populus</italic> (<xref ref-type="bibr" rid="B53">Xu et&#xa0;al., 2016</xref>) plants. Phenotypic changes that occur after polyploidization include increases in leaf size, plant height, stomatal length and stress resistance (<xref ref-type="bibr" rid="B18">Eng and Ho, 2019</xref>). However, the induction of polyploidy in mosses for improved horticultural applications is still rare.</p>
<p>Jasmonic acid (JA) is a lipid-derived plant hormone that is generated from trienoic fatty acid through the octadecanoid pathway. JA is involved in regulating various aspects of plant development, including root architecture (<xref ref-type="bibr" rid="B50">Wasternack and Hause, 2013</xref>; <xref ref-type="bibr" rid="B51">Wasternack and Strnad, 2018</xref>). In Arabidopsis, the JA signaling pathway was found to inhibit root growth and the formation of lateral and adventitious roots (<xref ref-type="bibr" rid="B50">Wasternack and Hause, 2013</xref>). However, JA was shown to promote lateral root formation in rice (<xref ref-type="bibr" rid="B49">Wang et&#xa0;al., 2002</xref>). Compared with that in vascular plants, the effects of JA in early landed plants seem to be more complex. A study in a fern plant <italic>Platycerium bifurcatum</italic> revealed that low concentrations of JA (0.01-1 &#x3bc;M) promoted the formation and elongation of primary rhizoids, whereas concentrations exceeding 1 &#x3bc;M had an inhibitory effect (<xref ref-type="bibr" rid="B10">Camloh et&#xa0;al., 1996</xref>). Both cyclopentenone (+)-cis-12-oxo-phytodienoicacid (OPDA, the precursor of JA) and methyl jasmonate (JA-Me) at the concentration of 5-50 &#x3bc;M significantly inhibited the growth of rhizoids. However, only OPDA but not JA or its derivative JA-Ile, could be detected in the moss <italic>P. patens</italic> (<xref ref-type="bibr" rid="B46">Stumpe et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B34">Ponce De Le&#xf3;n et&#xa0;al., 2012</xref>). Nevertheless, JA has been detected in several other moss species using phytohormone profiling (<xref ref-type="bibr" rid="B56">Z&#xe1;vesk&#xe1; Dr&#xe1;bkov&#xe1; et&#xa0;al., 2015</xref>).</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="s2_1">
<title>Plant materials</title>
<p>The original plant material of <italic>V. montagnei</italic> was obtained from Lishui Runsheng Moss Technology Co., Ltd. The <italic>V. montagnei</italic> was cultivated in greenhouse condition.</p>
</sec>
<sec id="s2_2">
<title>Axenic cultivation</title>
<p>The sporophyte capsules of <italic>V. montagnei</italic> were induced under the greenhouse conditions (25&#xb0;C, 16&#xa0;h light, and 8&#xa0;h dark). The sporophyte capsules were surface sterilized with incubation in 1&#xa0;ml of 10% sodium hypochlorite solution for 7&#xa0;min. The spores were released in 1&#xa0;ml of autoclaved water by opening the sterilized capsules with forceps, and then transferred to Petri dish containing one of the following solid medium: (1) BCDAT medium (1 mM MgSO<sub>4</sub>, 10 mM KNO<sub>3</sub>, 45 &#x3bc;M FeSO<sub>4</sub>, 1.8 mM KH<sub>2</sub>PO<sub>4</sub>, and trace element solution (0.22 &#x3bc;M CuSO<sub>4</sub>, 0.19 &#x3bc;M ZnSO<sub>4</sub>, 10 &#x3bc;M H<sub>3</sub>BO<sub>3</sub>, 0.10 &#x3bc;M Na<sub>2</sub>MoO<sub>4</sub>, 2 &#x3bc;M MnCl<sub>2</sub>, 0.23 &#x3bc;M CoCl<sub>2</sub>, 0.17 &#x3bc;M KI), and 1 mM CaCl<sub>2</sub>, 5 mM diammonium(+)-tartrate, 0.8% (w/v) agar) according to <xref ref-type="bibr" rid="B14">Cove et&#xa0;al. (2009a)</xref>, or (2) LQ #1 medium (BCDAT medium with 58 mM sucrose) or (3) LQ #2 medium (BCDAT medium with increased concentration of 20 mM KNO<sub>3</sub>) or (4) LQ #3 medium (BCDAT medium with 58 mM sucrose and increased concentration of 20 mM KNO<sub>3</sub>). Spores were germinated on the indicated media in the incubator with controlled conditions (25&#xb0;C, light intensity of 60-80 &#x3bc;mol m<sup>-2</sup> s<sup>-1</sup>, 16&#xa0;h light, and 8&#xa0;h dark).</p>
</sec>
<sec id="s2_3">
<title>Polyploidization induction</title>
<p>Protonema (20&#xa0;d after germination) of <italic>V. montagnei</italic> was immersed in 0.3% (w/v) colchicine solutions for 6&#xa0;h on a shaker at 60 rpm/min, and then rinsed 5 times with sterile water. Treated protonema was then homogenized with a blender (ULTRA-TURRAX Tube Drive, IKA). Finally, the obtained suspension was transferred to indicated media and cultured in the incubator under the conditions described above.</p>
</sec>
<sec id="s2_4">
<title>Ploidy identification</title>
<p>Before the ploidy identification, the treated protonema was subjected to 4 rounds of homogenization to avoid obtaining chimeric plants. Three times of ploidy analyses were conducted after the first, second and seventh subculture. First, the gametophyte moss material was cut into fragments in a pre-cooled petri dish, and 1&#xa0;ml of lysate was added. After filtering into a flow tube, 25 &#x3bc;l of propidium iodide (1 mg/mL) fluorescence staining solution was added for 1&#xa0;h in the dark, and polyploidy was subsequently detected by using a FACSCalibur Flow Cytometer (BD Biosciences, San Jose, CA, USA).</p>
</sec>
<sec id="s2_5">
<title>Transcriptome analysis</title>
<p>The whole gametophytes of WT <italic>V. montagnei</italic> and diploid lines were harvested and frozen in liquid nitrogen until RNA extraction. Total RNA was extracted using TRIzol reagent (Vazyme Biotech, Nanjing, China) according to the manufacturer&#x2019;s recommendations. The integrity and quality of the total RNA were verified using a 2100 Bioanalyzer RNA Nano chip (Agilent, Santa Clara, CA, USA). The concentration was measured with an ND-2000 spectrophotometer (NanoDrop, Wilmington, DE). The RNA was stored at &#x2212;80&#xb0;C for subsequent use.</p>
<p>The mRNA of each library was sequenced on an Illumina Novaseq 6000 platform located at the Major Biotech (Shanghai, China; <ext-link ext-link-type="uri" xlink:href="http://www.majorbio.com/">http://www.majorbio.com/</ext-link>). The NT (<ext-link ext-link-type="uri" xlink:href="ftp://ftp.ncbi.nlm.nih.gov/blast/db">ftp://ftp.ncbi.nlm.nih.gov/blast/db</ext-link>), NR (<ext-link ext-link-type="uri" xlink:href="ftp://ftp.ncbi.nlm.nih.gov/blast/db">ftp://ftp.ncbi.nlm.nih.gov/blast/db</ext-link>), COG (<ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/COG">http://www.ncbi.nlm.nih.gov/COG</ext-link>), KEGG (<ext-link ext-link-type="uri" xlink:href="http://www.genome.jp/keg">http://www.genome.jp/keg</ext-link>), and Swiss-Prot (<ext-link ext-link-type="uri" xlink:href="http://ftp.ebi.ac.uk/pub/databases/swissprot">http://ftp.ebi.ac.uk/pub/databases/swissprot</ext-link>) databases were used for blast search and annotation (<xref ref-type="bibr" rid="B3">Altschul et&#xa0;al., 1990</xref>). Blast2GO (v2.5.0) was used to obtain the GO (<ext-link ext-link-type="uri" xlink:href="http://geneontology.org">http://geneontology.org</ext-link>) annotation (<xref ref-type="bibr" rid="B13">Conesa et&#xa0;al., 2005</xref>), and InterProScan5 (v5.11&#x2013;51.0) was used to obtain the InterPro (<ext-link ext-link-type="uri" xlink:href="http://www.ebi.ac.uk/interpro">http://www.ebi.ac.uk/interpro</ext-link>) annotation (<xref ref-type="bibr" rid="B37">Quevillon et&#xa0;al., 2005</xref>). Blast similarity searches were performed for pairwise comparisons of all libraries. Orthologous and homoeologous genes were both standardized by the following criteria: E-value &#x2264; 9E<sup>&#x2212;100</sup>, alignment length &#x2265; 200 bp, and identity &#x2265; 90%. Fragments per kilo base per million (FPKM) was used to estimate the expression levels of genes and to compare the differences of gene expression among samples. Differentially expressed genes (DEGs) were identified through an algorithm developed by <xref ref-type="bibr" rid="B5">Audic and Claverie (1997)</xref>. The criterion applied was |log2Ratio| &#x2265; 1.0 and FDR &#x2264; 0.05.</p>
</sec>
<sec id="s2_6">
<title>Analysis of homologs in the JA biosynthesis and signaling pathways</title>
<p>The proteins responsible for the JA biosynthesis pathway in Arabidopsis including Fatty Acid Desaturase (FAD), Phospholipase A1 (PLA1), Lipoxygenase (LOX), Allene Oxide Synthase (AOS), Allene Oxide Cyclase (AOC), 12-oxo-phytodienoic acid reductase (OPR3), OPC-8:0 CoA ligase (OPCL); acyl-CoA oxidase (ACX), 3-ketoacyl-CoA thiolase (KAT), Multifunctional Protein (MFP) and JASMONATERESISTANT 1 (JAR1) and proteins responsible for the JA signaling pathway in Arabidopsis including MYC2, NOVEL INTERACTOR OF JAZ (NINJA) and JASMONATE-ZIM-DOMAIN PROTEIN 1 (JAZ1) were used as queries to BLAST against the all the transcripts obtained in the analysis of the transcriptome. The results were filtered by the following criteria: E-value &#x2264; 9E<sup>&#x2212;10</sup>, and identity &#x2265; 30%.</p>
</sec>
<sec id="s2_7">
<title>Measure of the content of JA</title>
<p>JA were extracted from 0.1 to 0.3&#xa0;g of frozen gametophytes as described by <xref ref-type="bibr" rid="B9">Cai et&#xa0;al. (2015)</xref>. Stable isotope-labeled JA (D<sub>6</sub>-JA, 0.2 ng) was used as the internal standard for JA and added to the sample extraction buffer. Phytohormones were extracted and the content was determined by High Performance Liquid Chromatography-Tandem Mass Spectrometry (HPLC-MS/MS) using the method described by (<xref ref-type="bibr" rid="B36">Qi et&#xa0;al., 2016</xref>).</p>
</sec>
<sec id="s2_8">
<title>Expression analysis with quantitative real-time PCR</title>
<p>Total RNA was extracted from the total gametophytes of three individual plants of WT and the diploid line using the same methods described above. Three biological replicates and three technical replicates were used for qRT-PCR analysis. Primers were designed using Beacon Designer 7.0 software (sequences given in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table&#xa0;3</bold>
</xref>). The <italic>V. montagnei</italic> EF1&#x3b1; gene was used as the reference. The PCR cycles consisted of an initial denaturation (95&#xb0;C/2&#xa0;min) followed by 40 cycles of 95&#xb0;C/15 s, 55&#xb0;C/15 s, and 72&#xb0;C/20 s. Relative expression levels were calculated using the 2<sup>&#x2212;&#x25b3;&#x25b3;CT</sup> method.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>Results</title>
<sec id="s3_1">
<title>The life cycle of the moss, <italic>V. montagnei</italic>, in culture</title>
<p>
<italic>V. montagnei</italic> is chosen in this study because of its ability to live in temperate, subtropical, and tropical Asia with different environmental conditions (<xref ref-type="bibr" rid="B39">Redfearn, 1990</xref>; <xref ref-type="bibr" rid="B29">K&#xfc;rschner and Ochyra, 2014</xref>). These characteristics may make it suitable for broad application in various conditions. To establish a sustainable method of obtaining <italic>V. montagnei</italic> plants for greenery, we first tried to establish the axenic cultivation system. The original <italic>V. montagnei</italic> plants were cultivated in the greenhouse to develop sporophytes with capsules. Then, mature capsules were collected, and the containing spores were sterilized with 10% sodium hypochlorite, and germinated on standard BCDAT medium (<xref ref-type="bibr" rid="B15">Cove et&#xa0;al., 2009b</xref>). However, few spores could germinate (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1A</bold>
</xref>), and a poor growth state (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>) was observed. Next, we modified the BCDAT medium by adding sucrose (LQ #1), increasing the concentration of potassium nitrate (LQ #2) or both (LQ #3). The spores cultured on LQ #1 and LQ #3 showed a significant improvement in germination and growth of protonema and gametophyte compared to those cultured on standard BCDAT medium (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1C, D</bold>
</xref>). However, germination could hardly be observed on medium LQ #2 (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1E, F</bold>
</xref>), and there was no obvious difference in the growth of protonema and gametophyte on medium LQ #1 and #3 (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1A, B, G, H</bold>
</xref>). These results indicated that the addition of sucrose assisted the germination and growth of <italic>V. montagnei</italic>, but the increased concentration of potassium nitrate did not have a significant effect.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>The germination of spores and growth state of <italic>Vesicularia montagnei</italic> (<italic>V. montagnei</italic>) on different medium. Spores germination <bold>(A, C, E, G)</bold> and gametophore plantlets development <bold>(B, D, F, H)</bold> on BCDAT medium with normal KNO<sub>3</sub> concentration <bold>(A, B)</bold>, or with additional of sucrose (<bold>C</bold>, <bold>D</bold>, medium refer as LQ #1), or with elevation concentration of KNO<sub>3</sub> [<bold>(E, F)</bold>, medium refer as LQ #2], or with additional of sucrose and elevation concentration of KNO<sub>3</sub> [<bold>(G, H)</bold>, medium refer as LQ #3]. Bars in <bold>(A, C, E</bold> and <bold>G)</bold>, 50 &#x3bc;m; Bars in <bold>(B, D, F</bold> and <bold>H)</bold>, 20&#xa0;mm.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1137214-g001.tif"/>
</fig>
<p>On the medium LQ #1, spores of <italic>V. montagnei</italic> (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2A</bold>
</xref>) began to germinate after 3 days of inoculation (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>) and formed filamentous chloronema and caulonema cells (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2C</bold>
</xref>). Buds that later developed to gametophores were formed after about 40 days of cultivation (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2D&#x2013;F</bold>
</xref>). To complete the life cycle of <italic>V. montagnei in vitro</italic>, gametophytes were transferred to growth chambers with a temperature of 25&#xb0;C and a short-day photoperiod (8h light/16h dark). Antheridia (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2G</bold>
</xref>) and archegonia (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2H</bold>
</xref>) started to emerge on the mature gametophytes at the axil on the stem of the same plant after about 50 days of culturing. Finally, the fertilized egg cell within the archegonia developed into a new capsule (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2I, J</bold>
</xref>). Thus, an axenic culturing system was successfully established, enabling the completion of the sexual life cycle of the moss <italic>V. montagnei</italic> in culture.</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>The life cycle of <italic>V. montagnei</italic> in culture. <bold>(A)</bold> Spores were sterilized and spread on the medium; <bold>(B)</bold> Spores start germinating, black arrows indicate the primary chloronema; <bold>(C)</bold> The development of protonema which including chloronema and caulonema cells; <bold>(D)</bold> The development of young bud from protonema, black arrows indicate the young bud; <bold>(E)</bold> The development of gametophyte; <bold>(F&#x2013;H)</bold> Gametophyte become mature <bold>(F)</bold> and the development of antheridia <bold>(G)</bold> and archegonia <bold>(H)</bold>; <bold>(I)</bold> The development of sporophyte on the gametophyte, black arrows indicate the sporophyte; <bold>(J)</bold> Capsula develops on the sporophyte and become mature.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1137214-g002.tif"/>
</fig>
</sec>
<sec id="s3_2">
<title>Diploidization of genome of the moss <italic>V. montagnei</italic> increased the density and length of the rhizoids</title>
<p>To improve the application of <italic>V. montagnei</italic> in the greenery establishment, we attempted to induce diploid <italic>V. montagnei</italic> plants using a 0.3% (w/v) colchicine solution. After subculturing for 60 days, young protonema was immersed in colchicine solution for one week. A total of 153 treated lines survived the treatment were subjected to ploidy analysis with flow cytometry (FCM). Compared with that of the wild-type <italic>V. montagnei</italic> (WT, <xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3A, E</bold>
</xref>), 6 lines (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3B&#x2013;D, I&#x2013;K</bold>
</xref>) with cells containing doubled DNA content (MD, <xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3F&#x2013;H, L&#x2013;N</bold>
</xref>) and 3 lines with cells displaying semi-doubled DNA content (MSD, <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;1</bold>
</xref>) were obtained in the initial screening. Subculture of the diploid lines was further analyzed with FCM, which validated the stability of the diploidy.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>The overall view of the wild type (WT) <italic>V. montagnei</italic> and the diploid lines and the ploidy analysis. The phenotype of 3-month-old gametophyte growing on LQ #1 medium of WT <bold>(A)</bold> and diploid lines <bold>(B&#x2013;D</bold>, <bold>I&#x2013;K)</bold>; The ploidy analysis with flow cytometry of the WT <bold>(E)</bold> and diploid lines <bold>(F&#x2013;H</bold>, <bold>L&#x2013;N)</bold>, The x-axis reflects the relative fluorescence intensity of the stained nuclei.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1137214-g003.tif"/>
</fig>
<p>Interestingly, compared to the WT line, diploid <italic>V. montagnei</italic> lines displayed longer rhizoids with about 700 times higher density (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4A&#x2013;C</bold>
</xref>). Moreover, diploidization significantly reduced the density of archegonium on the gametophyte (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4D&#x2013;F</bold>
</xref>). In addition, slight difference in the phyloid size was observed (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4G, H</bold>
</xref>). Further investigation of the size of cells in the phyloid revealed that diploid lines had longer and wider cells (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4K, J</bold>
</xref>).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>The enhancement of rhizoids growth and increasement of cell size of phylloid by diploidization. The comparison of growth of rhizoids <bold>(A, B)</bold>, archegonia <bold>(D, E)</bold>, leaf like phylloid <bold>(G, H)</bold> and cell size of phylloid <bold>(I, J)</bold> between 50-d-old WT and diploid line MD #5. The detailed data were showed in <bold>(C, F, K)</bold>; **<italic>p</italic> &lt; 0.01, <italic>t</italic>-test; n = 20.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1137214-g004.tif"/>
</fig>
</sec>
<sec id="s3_3">
<title>Transcriptome changes of diploid line</title>
<p>To dissect the underlying mechanism behind the phenotypic changes following the diploidization, we conducted a transcriptome comparison between the WT and diploid lines. The whole gametophytes of the WT and diploid lines and rhizoids collected from the diploid line were subjected to RNA-sequencing using the Illumina platform. A total of 31.07 Gb of raw reads were ultimately obtained. Quality control showed that all of the samples showed Q30 levels higher than 95% (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table&#xa0;1</bold>
</xref>). The transcriptome was <italic>de novo</italic> assembled, resulting in 41,520 unigenes and 75,694 transcripts.</p>
<p>To investigate the transcriptional evidence for phenotypic changes in the diploid lines, we analyzed and identified 1176 differential expressed genes (DEGs) in gametophores between WT and diploid line (WT VS MD) (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>). In order to narrow down the range of putative target genes responsible for longer and denser rhizoid phenotype, we compared gene expressions between aboveground and below-ground parts of the diploid gametophyte (MD_G VS MD_R), resulting in 2159 DEGs (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>). The intersection of these two sets of DEGs consisted of 432 genes, which represent the putative candidate genes associated with the rhizoid phenotype changes in the diploid lines (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>). Furthermore, the Kyoto Encyclopedia of Genes (KEGG) enrichment analysis showed that the 432 DEGs were significantly enriched in the pentose and glucuronate interconversions, phenylpropanoid biosynthesis and circadian rhythm plant pathways (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5B</bold>
</xref>). According to the Gene Ontology (GO) analysis, the molecular function, cellular component, and biological process were the most enriched pathways (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5C</bold>
</xref>).</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>The transcriptome analysis of the WT and diploid line. <bold>(A)</bold> The numbers of differential expressed genes (DEGs) between different samples. The KEGG analysis <bold>(B)</bold> and GO annotations <bold>(C)</bold> of genes shared by MD-G vs MD_R and MD_G vs WT_G.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1137214-g005.tif"/>
</fig>
</sec>
<sec id="s3_4">
<title>Differentially expressed genes in the jasmonic acid (JA) biosynthesis pathway between WT and diploid <italic>V. montagnei</italic> lines</title>
<p>The alpha-linolenic acid metabolism is known as a precursor of JA biosynthesis (<xref ref-type="bibr" rid="B35">Pyo et&#xa0;al., 2022</xref>). The phenylpropanoid biosynthesis pathway is regulated by the plant hormone JA (<xref ref-type="bibr" rid="B17">Dong and Lin, 2021</xref>). The significant enrichments of DEGs in both pathways (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5B</bold>
</xref>) motivate us to pay a close attention on the effects of diploidization on the JA biosynthesis and signaling. BLAST analysis against the transcriptome of the <italic>V. montagnei</italic> was conducted to obtain the homologs in the biosynthesis pathway (<italic>FAD</italic>, <italic>PLA1</italic>, <italic>LOX3</italic>, <italic>AOS</italic>, <italic>AOC3</italic>, <italic>OPR2</italic>, <italic>OPCL1</italic>, <italic>ACX5</italic>, <italic>MFP2</italic>, <italic>KAT2</italic>, and <italic>JAR1</italic>) and the signaling pathway (<italic>MYC2</italic>, <italic>NINJA</italic>, and <italic>JAZ1</italic>) (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table&#xa0;2</bold>
</xref>). Expressional analysis of these genes through RNA-seq showed that several homologs, like <italic>VmFAD2</italic>, <italic>VmAOC2</italic>, <italic>VmOPR2</italic>, <italic>VmOPR7</italic>, and <italic>VmOPCL4</italic> in the biosynthesis pathway were significantly enhanced in the diploid line compared with the WT, although higher expression of <italic>VmOPCL5</italic> was detected in the WT (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>). Moreover, two signaling genes, <italic>VmNINJA</italic> and <italic>VmJAZ1</italic> also showed higher expression levels in the diploid line (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6B</bold>
</xref>). These differentially expressed genes were validated with quantitative-PCR in the three-month-old plants (<xref ref-type="fig" rid="f6">
<bold>Figures&#xa0;6C&#x2013;L</bold>
</xref>). Consistently, the JA level in the diploid line is significantly higher than that in the WT (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6M</bold>
</xref>). These results demonstrated that the diploidization increased the level of JA in plants, which is probably caused by the enhancement of the JA biosynthesis pathway.</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>The comparison of JA biosynthesis and signaling pathways between WT and diploid line(s). <bold>(A, B)</bold> Comparison of transcription levels of genes in the JA biosynthesis <bold>(A)</bold> and signaling <bold>(B)</bold> pathways. <bold>(C&#x2013;L)</bold> Comparing of the expression levels of indicated genes in WT and diploid plants. Whole plants of three-month-old plants was collected and used for quantitative real-time PCR (qRT-PCR). Data was shown as mean &#xb1; SD of three replicates. An actin gene was used for normalization. <bold>(M)</bold> Comparison of JA level in the gametophyte in the WT and diploid lines MD #1 and #5. **<italic>p</italic> &lt; 0.01, *<italic>p</italic> &lt; 0.05, <italic>t</italic>-test, n = 3. NA, not applicable because the expression levels of indicated genes are below the detection limit.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpls-14-1137214-g006.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<title>Discussion</title>
<p>Mosses are increasingly popular in establishing natural living landscapes in urban buildings or indoor environments. The stable and sustainable way of obtaining mosses for these applications demands a standardized <italic>in vitro</italic> cultivation system. The previous study reported that the development of cultivation systems for different peat moss species is also important in mitigating climate change (<xref ref-type="bibr" rid="B57">Zhao et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B24">Heck et&#xa0;al., 2021</xref>). In our study, the moss <italic>V. montagnei</italic> that can adapt to different climate environments was chosen to establish an <italic>in vitro</italic> cultivation system.</p>
<p>Our results showed that adding sucrose to the BCDAT medium promotes both germination and the growth state of <italic>V. montagnei</italic>, which differs from <italic>P. patens</italic> that grows well without external carbon source (<xref ref-type="bibr" rid="B15">Cove et&#xa0;al., 2009b</xref>). It was also reported that external sugars had a negative impact on protonemal development and shoot multiplication of the moss <italic>Atrichum undulatum</italic> (<xref ref-type="bibr" rid="B43">Sabovljevic et&#xa0;al., 2005</xref>). Thus, different mosses may respond differently to exogenous sugars. However, in different species from the same genus of <italic>Sphagnum</italic>, sucrose- or glucose-addition has been consistently found to boost growth (<xref ref-type="bibr" rid="B45">Simola, 1969</xref>; <xref ref-type="bibr" rid="B21">Graham et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B7">Beike et&#xa0;al., 2015</xref>). Despite carbon source, nitrogen source has also been reported to be critical for determining growth in diverse bryophytes (<xref ref-type="bibr" rid="B6">Basile, 1975</xref>). In our study, simply increasing the concentration of KNO<sub>3</sub> did not enhance the growth of <italic>V</italic>. <italic>montagnei</italic> (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B-H</bold>
</xref>). An appropriate ratio between sucrose and ammonium nitrate is critical for the growth of protonema of the moss <italic>Polytrichum commune</italic> (<xref ref-type="bibr" rid="B55">Yu et&#xa0;al., 2008</xref>). The addition of sucrose and ammonium was able to increase the biomass of <italic>Sphagnum palustre</italic> (<xref ref-type="bibr" rid="B7">Beike et&#xa0;al., 2015</xref>). Moreover, different nitrogen sources also affected the growth rates, bud production rates, and plant morphology in the cultivation of <italic>Splachnum ampullaceum</italic> (<xref ref-type="bibr" rid="B20">Gonzalez et&#xa0;al., 2006</xref>). Our optimized medium may provide valuable information for the studying other <italic>Vesicularia</italic> species. In addition to sucrose and nitrogen sources, plant hormones were used to adjust the growth of mosses. The combinations of BA and IBA with different concentrations were used to obtain of moss <italic>Bruchia vogesiaca</italic> in different developmental phases (<xref ref-type="bibr" rid="B44">Sabovljevi&#x107; et&#xa0;al., 2012b</xref>). It will be interesting to investigate the effect of plant hormones on the growth of <italic>V. montagnei</italic> in the future.</p>
<p>Various media types, such as BCD, Murashige and Skoog (MS), and Knop, have been used for growing different species of mosses (<xref ref-type="bibr" rid="B40">Reski and Abel, 1985</xref>; <xref ref-type="bibr" rid="B15">Cove et&#xa0;al., 2009b</xref>; <xref ref-type="bibr" rid="B42">Sabovljevi&#x107; et&#xa0;al., 2012a</xref>; <xref ref-type="bibr" rid="B31">Pandey et&#xa0;al., 2014</xref>). Previous studies compared the effectiveness of BCD and half-strength MS (MS/2) media in cultivating <italic>Bruchia vogesiaca</italic> (Bruchiaceae) and <italic>Entosthodon hungaricus</italic> (Funariaceae) (<xref ref-type="bibr" rid="B42">Sabovljevi&#x107; et&#xa0;al., 2012a</xref>; <xref ref-type="bibr" rid="B44">Sabovljevi&#x107; et&#xa0;al., 2012b</xref>). It was found that MS/2 medium was the most suitable for the propagation and subculturing of <italic>E. hungaricus</italic> (<xref ref-type="bibr" rid="B42">Sabovljevi&#x107; et&#xa0;al., 2012a</xref>). However, <italic>B. vogesiaca</italic> had better growth in terms of protonema diameter and bud initiation when cultivated in the BCD medium (<xref ref-type="bibr" rid="B44">Sabovljevi&#x107; et&#xa0;al., 2012b</xref>). In this study, the successful axenic cultivation of <italic>V</italic>. <italic>montagnei</italic> for its entire life cycle was achieved on the BCDAT solid medium with added sucrose (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). It appears that different species of moss may have varying preferences for the types of media. Our development of this axenic cultivation system has enabled the propagation and multiplication of homogeneous and insect-free <italic>V</italic>. <italic>montagnei</italic> plant materials. And most importantly, this system allows for the establishment of several lines of diploid <italic>V</italic>. <italic>montagnei</italic> plants with an improved rhizoid system (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4A&#x2013;C</bold>
</xref>). These lines may hold promising potential for greenery applications. It has been reported that cultivation of <italic>Sphagnum</italic> mosses in the liquid Knop medium yielded high amounts of biomass (<xref ref-type="bibr" rid="B7">Beike et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B57">Zhao et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B24">Heck et&#xa0;al., 2021</xref>). Conducting further investigations to test or modify the liquid medium for the purpose of increasing the biomass of <italic>V. montagnei</italic> moss can be helpful for its application in greenery establishment.</p>
<p>Artificial-induced polyploidization is a commonly used technique in horticultural plant breeding, which usually produces larger organs such as flowers, fruits, seeds, leaves, stems, and roots in vascular plants (<xref ref-type="bibr" rid="B18">Eng and Ho, 2019</xref>). This phenomenon is termed as &#x201c;giga&#x201d; effect. Our study found that the diploidization of the early landed moss <italic>V. montagnei</italic> also resulted in enhanced growth of rhizoids (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4A, B</bold>
</xref>) and slightly larger leaf-like phyloid (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4G, H, I, J</bold>
</xref>). These results provided an additional example of the &#x201c;giga&#x201d; effects of polyploidization in early landed plants. However, a previous study in <italic>P. patens</italic> showed that diploidization significantly decreased plant growth rate and dry weight (<xref ref-type="bibr" rid="B19">Gabriele et&#xa0;al., 2005</xref>). These different phenotype changes indicated the divergence of the genome structure between different moss species. Our results indicated that artificial-induced polyploidization has great potential for developing diploid moss lines with improved growth performances.</p>
<p>In this study, JA was detected in the fresh samples of both the WT and diploid lines of <italic>V. montagnei</italic> (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6H</bold>
</xref>). Consistently, several putative homologs of the JA synthesis pathway were detected in the transcriptomic analysis (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>), which may form a complete synthesis pathway in the <italic>V. montagnei</italic>. Similarly, previous phytohormone profiling of several bryophytes (including 6 and 24 species of liverworts and mosses, respectively) successfully detected JA with the concentration range from 1.20 pmol/g FW (<italic>Sphagnum</italic> sp.) to 78.80 pmol/g FW (<italic>Pogonatum urnigerum</italic>) (<xref ref-type="bibr" rid="B56">Z&#xe1;vesk&#xe1; Dr&#xe1;bkov&#xe1; et&#xa0;al., 2015</xref>). In our study, JA-Ile is not detectable in <italic>V. montagnei</italic>, which may be caused by the extremely low level or the inactive JAR1-like enzyme. The former reason is more likely because JA-Ile is far less abundant than JA and occurs at very low amounts (almost close to the limit of detection) in several moss species (<italic>Pellia endiviifolia</italic>, <italic>Sphagnum compactum</italic>, <italic>Sphagnum</italic> sp., and <italic>Polytrichum commune</italic>) (<xref ref-type="bibr" rid="B56">Z&#xe1;vesk&#xe1; Dr&#xe1;bkov&#xe1; et&#xa0;al., 2015</xref>). However, studies in the <italic>P. patents</italic> and the liverwort <italic>Marchantia polymorpha</italic> could only detect the precursor OPDA but not JA or the conjugate JA-Ile (<xref ref-type="bibr" rid="B46">Stumpe et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B34">Ponce De Le&#xf3;n et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B54">Yamamoto et&#xa0;al., 2015</xref>), even though the <italic>P. patens</italic> genome contains several OPR-like genes (<xref ref-type="bibr" rid="B8">Breithaupt et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B30">Li et&#xa0;al., 2009</xref>). These results suggested that there may be evolutionary divergences in the JA biosynthesis pathway among the bryophytes. Further investigation of the enzymes responsible for the metabolism downstream of OPDA (such as OPR-like and OPCL) may help to clarify this.</p>
<p>The JA-Ile is the bio-active form of JA in the vascular plants and is able to induce the expression of several JA signaling genes through the negative feedback loop (<xref ref-type="bibr" rid="B11">Chico et&#xa0;al., 2008</xref>). Interestingly, JA-Ile was not detected in the moss <italic>V. montagnei</italic>, but the signaling homologs <italic>VmJAZ1</italic> and <italic>VmNINJA</italic> showed increased expression levels in the diploid lines with elevated JA content (<xref ref-type="fig" rid="f6">
<bold>Figures&#xa0;6K, M</bold>
</xref>). This suggests that the bio-active jasmonate in the moss <italic>V. montagnei</italic> is likely not JA-Ile. Notably, a study in <italic>Nicotiana attenuata</italic> found that JA-Ile is not the only active oxylipin signal molecule (<xref ref-type="bibr" rid="B48">Wang et&#xa0;al., 2008</xref>). While the JA-Ile application fully restored the resistance to <italic>Manduca sexta</italic> feeding in <italic>JAR4</italic>/<italic>6</italic>-silenced plants (impaired in JA-Ile synthesis), it only partially restored resistance in <italic>LOX3</italic>-silenced plants (deficient in JA&#x2013;Ile and other oxylipins). Further search for the bio-active jasmonate besides JA-Ile will be very interesting. Our investigation provided evolutionary evidence for the existence of other bio-active jasmonate besides JA-Ile and improved our understanding of jasmonate biosynthesis.</p>
<p>It was proposed that rhizoid in moss gametophytes and root hair on the roots of vascular plant sporophytes were close related in the evolutionary perspective (<xref ref-type="bibr" rid="B26">Jones and Dolan, 2012</xref>). Because a similar gene regulatory network controls the development of rhizoids and root hairs. In the vascular plant Arabidopsis, JA has been shown to have a pronounced effect on promoting root hair formation (<xref ref-type="bibr" rid="B58">Zhu et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B23">Han et&#xa0;al., 2020</xref>). Consistently, our study found a significant increased rhizoid density associated with the accumulation of JA content in the diploid lines of <italic>V. montagnei</italic> (<xref ref-type="fig" rid="f4">
<bold>Figures&#xa0;4A&#x2013;C</bold>
</xref>). These results suggested that JA has a conserved function in regulating the development of both rhizoids and root hairs. Based on our findings, it is promising to enhance the rhizoid growth through the direct application of JA <italic>in vitro</italic>, which may improve the ability of the plants to adhere to the surfaces for greenery decoration purposes.</p>
</sec>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: <ext-link ext-link-type="uri" xlink:href="https://ngdc.cncb.ac.cn/gsa">https://ngdc.cncb.ac.cn/gsa</ext-link>, GSA: CRA009372.</p>
</sec>
<sec id="s6" sec-type="author-contributions">
<title>Author contributions</title>
<p>LL designed and supervised the study. QL and YH performed most of the experiments and analyzed the data. ZC contributed in the diploid induction. ZX analyzed the RNA-seq data. ZC, HL, and CW contributed in the preparing of mosses. YH and QL drafted the manuscript. LL, LD, and HY revised the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="s7" sec-type="funding-information">
<title>Funding</title>
<p>This study was supported by the National Natural Science Foundation of China (No. 31971410).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We thank Prof. Mitsuyasu Hasebe, and Prof. Zhaohui Chu for discussion and suggestions.</p>
</ack>
<sec id="s8" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>Author CW is employed by Lishui Runsheng Moss Technology Co., Ltd. The reviewer LW declared a shared affiliation with the author QL to the handling editor at the time of review. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s9" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s10" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fpls.2023.1137214/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fpls.2023.1137214/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet_1.pdf" id="SM1" mimetype="application/pdf"/>
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<supplementary-material xlink:href="Table_3.xlsx" id="SM4" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
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