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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2022.893858</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Arabinogalactan Protein-Like Proteins From <italic>Ulva lactuca</italic> Activate Immune Responses and Plant Resistance in an Oilseed Crop</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>P&#x0159;erovsk&#x00E1;</surname>
<given-names>Tereza</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1753976/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Jind&#x0159;ichov&#x00E1;</surname>
<given-names>Barbora</given-names>
</name>
<xref rid="aff2" ref-type="aff"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1757519/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Henke</surname>
<given-names>Svatopluk</given-names>
</name>
<xref rid="aff3" ref-type="aff"><sup>3</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1765024/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Yvin</surname>
<given-names>Jean-Claude</given-names>
</name>
<xref rid="aff4" ref-type="aff"><sup>4</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1421545/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ferrieres</surname>
<given-names>Vincent</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/725906/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Burketov&#x00E1;</surname>
<given-names>Lenka</given-names>
</name>
<xref rid="aff2" ref-type="aff"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/171971/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Lipovov&#x00E1;</surname>
<given-names>Petra</given-names>
</name>
<xref rid="aff3" ref-type="aff"><sup>3</sup></xref>
<xref rid="fn0003" ref-type="author-notes"><sup>&#x2020;</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Nguema-Ona</surname>
<given-names>Eric</given-names>
</name>
<xref rid="aff4" ref-type="aff"><sup>4</sup></xref>
<xref rid="c001" ref-type="corresp"><sup>&#x002A;</sup></xref>
<xref rid="fn0003" ref-type="author-notes"><sup>&#x2020;</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/101976/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Ecole Nationale Sup&#x00E9;rieure de Chimie de Rennes, CNRS, ISCR-UMR 6226, Univ Rennes</institution>, <addr-line>Rennes</addr-line>, <country>France</country>
</aff>
<aff id="aff2"><sup>2</sup><institution>Laboratory of Pathological Plant Physiology, Institute of Experimental Botany of the Czech Academy of Sciences</institution>, <addr-line>Prague</addr-line>, <country>Czechia</country>
</aff>
<aff id="aff3"><sup>3</sup><institution>Department of Biochemistry and Microbiology, University of Chemistry and Technology Prague</institution>, <addr-line>Prague</addr-line>, <country>Czechia</country>
</aff>
<aff id="aff4"><sup>4</sup><institution>Agro Innovation International TIMAC AGRO, Laboratoire de Nutrition V&#x00E9;g&#x00E9;tale, P&#x00F4;le Stress Biotique</institution>, <addr-line>Saint Malo</addr-line>, <country>France</country>
</aff>
<author-notes>
<fn id="fn0001" fn-type="edited-by">
<p>Edited by: Brigitte Mauch-Mani, Universit&#x00E9; de Neuch&#x00E2;tel, Switzerland</p>
</fn>
<fn id="fn0002" fn-type="edited-by">
<p>Reviewed by: Edita Tylov&#x00E1;, Charles University, Czechia; Birgit Classen, University of Kiel, Germany; Ning Zhang, Boyce Thompson Institute (BTI), United States</p>
</fn>
<corresp id="c001">&#x002A;Correspondence: Eric Nguema-Ona, <email>Eric.NguemaOna@roullier.com</email></corresp>
<fn id="fn0003" fn-type="equal">
<p><sup>&#x2020;</sup>These authors have contributed equally to this work and share last authorship</p>
</fn>
<fn id="fn0004" fn-type="other">
<p>This article was submitted to Plant Pathogen Interactions, a section of the journal Frontiers in Plant Science</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>20</day>
<month>05</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>13</volume>
<elocation-id>893858</elocation-id>
<history>
<date date-type="received">
<day>10</day>
<month>03</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>22</day>
<month>04</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2022 P&#x0159;erovsk&#x00E1;, Jind&#x0159;ichov&#x00E1;, Henke, Yvin, Ferrieres, Burketov&#x00E1;, Lipovov&#x00E1; and Nguema-Ona.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>P&#x0159;erovsk&#x00E1;, Jind&#x0159;ichov&#x00E1;, Henke, Yvin, Ferrieres, Burketov&#x00E1;, Lipovov&#x00E1; and Nguema-Ona</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Natural compounds isolated from macroalgae are promising, ecofriendly, and multifunctional bioinoculants, which have been tested and used in agriculture. Ulvans, for instance, one of the major polysaccharides present in <italic>Ulva</italic> spp. cell walls, have been tested for their plant growth-promoting properties as well as their ability to activate plant immune defense, on a large variety of crops. Recently, we have characterized for the first time an arabinogalactan protein-like (AGP-like) from <italic>Ulva lactuca</italic>, which exhibits several features associated to land plant AGPs. In land plant, AGPs were shown to play a role in several plant biological functions, including cell morphogenesis, reproduction, and plant-microbe interactions. Thus, isolated AGP-like proteins may be good candidates for either the plant growth-promoting properties or the activation of plant immune defense. Here, we have isolated an AGP-like enriched fraction from <italic>Ulva lactuca</italic> and we have evaluated its ability to (i) protect oilseed rape (<italic>Brassica napus</italic>) cotyledons against <italic>Leptosphaeria maculans</italic>, and (ii) its ability to activate immune responses. Preventive application of the <italic>Ulva</italic> AGP-like enriched fraction on oilseed rape, followed by cotyledon inoculation with the fungal hemibiotroph <italic>L. maculans</italic>, resulted in a major reduction of infection propagation. The noticed reduction correlated with an accumulation of H<sub>2</sub>O<sub>2</sub> in treated cotyledons and with the activation of SA and ET signaling pathways in oilseed rape cotyledons. In parallel, an ulvan was also isolated from <italic>Ulva lactuca</italic>. Preventive application of ulvan also enhanced plant resistance against <italic>L. maculans</italic>. Surprisingly, reduction of infection severity was only observed at high concentration of ulvan. Here, no such significant changes in gene expression and H<sub>2</sub>O<sub>2</sub> production were observed. Together, this study indicates that <italic>U. lactuca</italic> AGP-like glycoproteins exhibit promising elicitor activity and that plant eliciting properties of <italic>Ulva</italic> extract, might result not only from an ulvan-originated eliciting activities, but also AGP-like originated.</p>
</abstract>
<kwd-group>
<kwd>Arabinogalactan proteins</kwd>
<kwd>plant defense</kwd>
<kwd>elicitor</kwd>
<kwd>hemibiotrophic fungus</kwd>
<kwd>plant immunity</kwd>
<kwd><italic>Ulva lactuca</italic></kwd>
</kwd-group>
<contract-num rid="cn1">CZ.02.1.01/0.0/0.0/16_019/0000738</contract-num>
<contract-num rid="cn2">A1_FPBT_2020_001</contract-num>
<contract-sponsor id="cn1">European Regional Development</contract-sponsor>
<contract-sponsor id="cn2">Specific University Research</contract-sponsor>
<counts>
<fig-count count="6"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="135"/>
<page-count count="18"/>
<word-count count="14509"/>
</counts>
</article-meta>
</front>
<body>
<sec id="sec1" sec-type="intro">
<title>Introduction</title>
<p>The whole agricultural sector is facing the forthcoming challenges to keep up productivity with a growing global population (<xref ref-type="bibr" rid="ref100">Ray et al., 2013</xref>). Nowadays, high and continuous agricultural productivity is dependent on the use of chemical fertilizers and pesticides. Nevertheless, the excessive use of these compounds has adverse effects on human health and the environment (<xref ref-type="bibr" rid="ref21">Carvalho, 2006</xref>). The recent progress in the use of either natural plant growth-promoting substances or microorganisms (also termed plant biostimulants) has allowed a reduction and optimized use of fertilizers. This combination of mineral nutrients and biostimulants allows a better nutrient use efficiency, a better crop tolerance against abiotic stresses, and indirectly, a better quality and an improved yield of the crops (<xref ref-type="bibr" rid="ref103">Rouphael and Colla, 2020</xref>; <xref ref-type="bibr" rid="ref35">du Jardin et al., 2020</xref>). Likewise, microorganisms/organisms or natural substances were also tested and used in agriculture as agents able to interfere by different means with the occurrence of plant diseases caused by pathogens. Natural substances encompass various types of biomolecules, which can be extracted from a vast number of plant species. Among these natural substances, plant elicitors are described as substances able to activate plant immune system, and further, to protect crop against various kind of pathogens and parasites both in conventional and organic agriculture (<xref ref-type="bibr" rid="ref127">Wiesel et al., 2014</xref>; <xref ref-type="bibr" rid="ref52">Jamiolkowska, 2020</xref>).</p>
<p>Plants have indeed developed an efficient immune system described in the zig-zag model from <xref ref-type="bibr" rid="ref58">Jones and Dangl (2006)</xref>, which can be triggered <italic>via</italic> (i) the perception of plant elicitors or pathogen/microbial/damage-associated molecular patterns (P/M/DAMPs) also known as pathogen-associated molecular pattern PAMP-triggered immunity (PTI) or (ii) specific pathogens&#x2019; effectors (effector-triggered immunity, ETI; <xref ref-type="bibr" rid="ref58">Jones and Dangl, 2006</xref>). In field conditions, the mobilization of PTI by plant defence elicitors could lead to a pesticide reduction. In PTI, the recognition of plant elicitors by cell surface pattern-recognition receptors (PRRs) induces a series of early events, such as reactive oxygen species (ROS), nitric oxide production, and intracellular calcium influx. Then, intermediate events consist of activation of mitogen-activated protein kinases (MAPK) and phytohormone signaling (salicylic acid&#x2014;SA, jasmonic acid&#x2014;JA, and/or ethylene&#x2014;ET; <xref ref-type="bibr" rid="ref13">Bigeard et al., 2015</xref>). These signaling cascades trigger the induction of defense genes leading to the production of various defense-related compounds such as pathogensis-related (PR) proteins (<xref ref-type="bibr" rid="ref122">Van Loon et al., 2006</xref>) or specialized antimicrobial compounds (<xref ref-type="bibr" rid="ref15">Boller and Felix, 2009</xref>).</p>
<p>Many plant elicitors, also called PAMPs, which have been so far isolated and tested in both laboratory and field experiments, originated from microbes (MAMPs; e.g., flagellin; <xref ref-type="bibr" rid="ref131">Zipfel et al., 2004</xref>), or plant themselves (DAMPs; oligogalacturonides; <xref ref-type="bibr" rid="ref45">Hahn et al., 1981</xref>; <xref ref-type="bibr" rid="ref12">Benedetti et al., 2015</xref>). A third category, called exogenous elicitors, which includes seaweed-based natural substances, was also reported to activate PTI. Interestingly, many macroalgae-based extracts were also reported to exhibit plant growth-promoting properties. Carrageenans are galactan-based polysaccharides commonly found in red macroalgae and were reported to exhibit plant-eliciting properties (<xref ref-type="bibr" rid="ref78">Mercier et al., 2001</xref>). Laminarins, &#x03B2;-glucan-containing polysaccharides of brown macroalgae were also reported to exhibit plant-eliciting properties (<xref ref-type="bibr" rid="ref62">Klarzynski et al., 2000</xref>; <xref ref-type="bibr" rid="ref5">Aziz et al., 2003</xref>). Finally, ulvan polysaccharide, constitutive component of the cell walls of the green macroalgae <italic>Ulva</italic> genus was also reported to activate PTI (<xref ref-type="bibr" rid="ref26">Cluzet et al., 2004</xref>; <xref ref-type="bibr" rid="ref55">Jaulneau et al., 2010</xref>; <xref ref-type="bibr" rid="ref76">Martin et al., 2020</xref>; <xref ref-type="bibr" rid="ref17">Borba et al., 2021</xref>).</p>
<p><italic>Ulva</italic> spp. belong to the class of Ulvophyceae, a group of green marine benthic algae, which dominates shallow marine environments and displays outstanding diversity regarding cytological and morphological characteristics (<xref ref-type="bibr" rid="ref126">Wichard et al., 2015</xref>). <italic>Ulva</italic> spp. were shown to contain macro- and micronutrients, phytohormones, osmoprotectants, and other compounds with possible biological activities (<xref ref-type="bibr" rid="ref24">Chbani et al., 2015</xref>; <xref ref-type="bibr" rid="ref109">Shoubaky and Salem, 2016</xref>; <xref ref-type="bibr" rid="ref82">Nabti et al., 2017</xref>). The presence of these compounds may accounts for well documented, <italic>Ulva</italic> extract-dependent, plant-growth promoting properties (<xref ref-type="bibr" rid="ref44">Gireesh et al., 2011</xref>; <xref ref-type="bibr" rid="ref29">Divya et al., 2015</xref>; <xref ref-type="bibr" rid="ref22">Castellanos-Barriga et al., 2017</xref>; <xref ref-type="bibr" rid="ref92">Paulert et al., 2021</xref>; <xref ref-type="bibr" rid="ref108">Shefer et al., 2022</xref>). In addition to ulvans, <italic>Ulva</italic> spp. was also reported to contain fibrillar cellulose, mannan, or xylan polysaccharides in their cell walls (<xref ref-type="bibr" rid="ref31">Domozych et al., 2012</xref>).</p>
<p>One class of proteins, the arabinogalactan proteins (AGPs), found in algal, moss, fern, and flowering plant cells walls and are strongly implicated in developmental processes (<xref ref-type="bibr" rid="ref68">Lee et al., 2005</xref>; <xref ref-type="bibr" rid="ref86">Nguema-Ona et al., 2012</xref>; <xref ref-type="bibr" rid="ref9">Bartels and Classen, 2017</xref>; <xref ref-type="bibr" rid="ref101">Renzaglia et al., 2017</xref>; <xref ref-type="bibr" rid="ref47">Happ and Classen, 2019</xref>; <xref ref-type="bibr" rid="ref91">Palacio-L&#x00F3;pez et al., 2019</xref>) as well as in interaction with microorganisms (<xref ref-type="bibr" rid="ref87">Nguema-Ona et al., 2013</xref>; <xref ref-type="bibr" rid="ref75">Mareri et al., 2019</xref>). AGPs are proteoglycans consisting of two distinct moieties, the carbohydrate and the protein domain. The carbohydrate component typically accounts for 90%&#x2013;98% of an AGP by weight and is rich in arabinose and galactose residues. The protein moiety, accounting for less than 10% of an AGP by weight is hydroxyproline-rich (<xref ref-type="bibr" rid="ref110">Showalter, 2001</xref>; <xref ref-type="bibr" rid="ref106">Seifert and Roberts, 2007</xref>). However, there is a wide range of variability in the structure and composition of both the carbohydrate and the polypetide parts. Based on the amino acid sequence and composition, AGPs were initially categorized into classical AGPs [consisting of a P/Hyp-rich domain heavily <italic>O</italic>-glycosylated, a hydrophobic C-terminal (C-ter) domain required for anchorage to the plasma membrane, and a signal peptide sequence] and non-classical AGPs (sometimes <italic>N</italic>-glycosylated and lacking the C-ter domain; <xref ref-type="bibr" rid="ref86">Nguema-Ona et al., 2012</xref>). Non-classical AGPs also tend to be less heavily glycosylated (<xref ref-type="bibr" rid="ref110">Showalter, 2001</xref>; <xref ref-type="bibr" rid="ref74">Ma et al., 2018</xref>).</p>
<p>Although AGPs and AGP-like structures were reported to occur across the green and brown algae lineages, contrasting with the wealth of information available on land plant AGPs, much less is known about AGP occurrence, structure, and function in algae (<xref ref-type="bibr" rid="ref111">S&#x00F8;rensen et al., 2011</xref>; <xref ref-type="bibr" rid="ref50">Herv&#x00E9; et al., 2015</xref>; <xref ref-type="bibr" rid="ref91">Palacio-L&#x00F3;pez et al., 2019</xref>). Using immunocytochemistry and Yariv reagent, the presence of AGPs was described in several green microalgae of the freshwater-originated Charophyta division, specifically in Desmidiaceae, Coleochaetacea, Mesotaeniacea, Zygnemataceae, Chlorokybaceae, and Peniaceae families (<xref ref-type="bibr" rid="ref32">Domozych et al., 2007</xref>, <xref ref-type="bibr" rid="ref34">2009</xref>; <xref ref-type="bibr" rid="ref36">Eder et al., 2008</xref>; <xref ref-type="bibr" rid="ref111">S&#x00F8;rensen et al., 2011</xref>; <xref ref-type="bibr" rid="ref91">Palacio-L&#x00F3;pez et al., 2019</xref>; <xref ref-type="bibr" rid="ref96">Pfeifer et al., 2021</xref>). Furthermore, AGPs were detected as well in the Charale order, representing the multicellular algae with stem-like and leaf-like structures (<xref ref-type="bibr" rid="ref33">Domozych et al., 2010</xref>). Within the Chlorophyta division, AGPs were also reported in Oedogoniaceae and Codiaceae families (<xref ref-type="bibr" rid="ref39">Estevez et al., 2008</xref>, <xref ref-type="bibr" rid="ref38">2009</xref>; <xref ref-type="bibr" rid="ref40">Fern&#x00E1;ndez et al., 2010</xref>, <xref ref-type="bibr" rid="ref41">2015</xref>). Very recently, AGP-like glycoproteins were isolated for the first time from <italic>Ulva lactuca</italic> (<xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). In this study, <italic>Ulva</italic> AGP-like glycoproteins exhibited a contrasting reactivity with primary anti-AGP antibodies as well as with Yariv reagent when compared to AGP glycoproteins isolated from <italic>Solanum lycopersicum</italic>. While the amino acid analysis of the AGP-like glycoproteins purified by the &#x03B2;-<sc>d</sc>-glucosyl Yariv reagent showed a similarity between <italic>Ulva</italic> AGP-like glycoproteins and land plant AGPs, saccharide analysis revealed unique glycosylation of the <italic>Ulva lactuca</italic> AGP-like glycoproteins. Surprisingly, arabinose and galactose were not the most prevalent monosaccharides and the most outstanding was the presence of 3-<italic>O</italic>-methyl-hexose, which has never been described in the AGPs (<xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). Nevertheless, methylation of AGP glycans was previously reported (<xref ref-type="bibr" rid="ref8">Bartels et al., 2017</xref>; <xref ref-type="bibr" rid="ref9">Bartels and Classen, 2017</xref>; <xref ref-type="bibr" rid="ref47">Happ and Classen, 2019</xref>; <xref ref-type="bibr" rid="ref116">Temple et al., 2019</xref>; <xref ref-type="bibr" rid="ref95">Pfeifer et al., 2020</xref>). Moreover, methylated glycoproteins and polysaccharides are widely distributed within algal cell walls (<xref ref-type="bibr" rid="ref90">Ogawa et al., 2001</xref>; <xref ref-type="bibr" rid="ref16">Bollig et al., 2007</xref>; <xref ref-type="bibr" rid="ref20">Capek et al., 2008</xref>; <xref ref-type="bibr" rid="ref69">Levy-Ontman et al., 2011</xref>; <xref ref-type="bibr" rid="ref113">Staudacher, 2012</xref>; <xref ref-type="bibr" rid="ref77">Mathieu-Rivet et al., 2014</xref>; <xref ref-type="bibr" rid="ref80">M&#x00F3;csai et al., 2019</xref>; <xref ref-type="bibr" rid="ref704">Pfeifer and Classen 2020</xref>).</p>
<p>In the present study, an AGP-like enriched fraction from <italic>Ulva lactuca</italic> has been purified and chemically characterized. In order to find out if the <italic>Ulva</italic> AGP-like enriched fraction would exhibit plant eliciting properties, the fraction was tested for its ability to elicit the activation of PTI on oilseed rape (<italic>Brassica napus</italic>). Oilseed rape is widely grown in Europe, Canada, China, and Australia, and ranks second as oilseed production right after soybean (<xref ref-type="bibr" rid="ref84">Neik et al., 2020</xref>; <xref ref-type="bibr" rid="ref98">Raboanatahiry et al., 2021</xref>). Oilseed rape is confronted by a plethora of pathogenic agents, including <italic>Plasmodiophora brassicae</italic>, <italic>Leptosphaeria maculans</italic>, <italic>Sclerotinia sclerotiorumm</italic>, <italic>Hyaloperonospora parasitica</italic>, and others (<xref ref-type="bibr" rid="ref11">Becker et al., 2017</xref>; <xref ref-type="bibr" rid="ref85">Neik et al., 2017</xref>, <xref ref-type="bibr" rid="ref84">2020</xref>). <italic>Leptosphaeria maculans</italic> is a hemibiotrophic fungal pathogen causing blackleg disease, also called phoma stem canker (<xref ref-type="bibr" rid="ref71">Lipkov&#x00E1; et al., 2021</xref>). The disease causes annually 10%&#x2013;20% of yield losses (<xref ref-type="bibr" rid="ref121">Van de Wouw and Howlett, 2020</xref>). The AGP-like enriched fraction was further tested for its ability to reduce the occurrence and the spread of blackleg disease on oilseed rape cotyledons. All along this work, the level of activation of PTI as well as the efficacy of the AGP-like enriched fraction was evaluated. In parallel, an ulvan was also isolated and its ability to both activate immune responses and to protect oilseed rape, was evaluated and compared to the AGP-like enriched fraction. Our results showed that the AGP-like enriched fraction was able to significantly activate PTI, and further, to protect the oilseed rape cotyledons from the occurrence and the spread of <italic>L. maculans</italic>. Interestingly, plants treated with the AGP-like enriched fraction showed a concentration-dependent reduction in the severity of <italic>L. maculans</italic> infection, while ulvan was effective only at the highest tested concentration. Likewise, the level of activation of PTI was more pronounced following the application of the AGP-like enriched fraction compared to the ulvan.</p>
</sec>
<sec id="sec2" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec id="sec3">
<title>Biological Materials</title>
<p><italic>U. lactuca</italic> materials collected in Brittany (France) were purchased from the European Marine Biological Resource Center (EMBRC, Station Biologique de Roscoff; <ext-link xlink:href="https://embrc-france.obs-banyuls.fr" ext-link-type="uri">https://embrc-france.obs-banyuls.fr</ext-link>) in 2017. <italic>U. lactuca</italic> was identified based on the sequence and phylogenetic analysis of rubisco large subunit (<italic>rbcL</italic>), internal transcribe spacer (ITS), and <italic>tuf</italic>A (plastid elongation factor) genes according to <xref ref-type="bibr" rid="ref123">Vieira et al. (2016)</xref> and <xref ref-type="bibr" rid="ref70">Lin et al. (2012)</xref>. The material used for further extractions and analyses was freeze-dried and ground to a fine powder in CryoMill.</p>
<p><italic>B. napus</italic> cultivar Columbus plants were grown hydroponically in perlite nourished with Steiner&#x2019;s nutrient solution (<xref ref-type="bibr" rid="ref114">Steiner, 1984</xref>) under controlled conditions (14/10&#x2009;h, 22/20&#x00B0;C, day/night). For inoculation tests, gene expression tests and hydrogen peroxide detection cotyledon leaves were used.</p>
<p>The fungus <italic>L. maculans</italic> (anamorph <italic>Phoma lingam</italic>) isolate JN2 (<xref ref-type="bibr" rid="ref6">Balesdent et al., 2001</xref>) was cultivated on V8 solidified medium (20% V8 vegetable juice, Campbell, 3&#x2009;g&#x00B7;L<sup>&#x2212;1</sup> CaCO<sub>3</sub>, and 15&#x2009;g&#x00B7;L<sup>&#x2212;1</sup> agar, autoclaved). Sporulation cultures and conidia suspension were prepared according to <xref ref-type="bibr" rid="ref104">&#x0160;a&#x0161;ek et al. (2012a)</xref>. After harvesting, the spores were diluted to 10<sup>8</sup> spore&#x00B7;ml<sup>&#x2212;1</sup> and stored at &#x2212;20&#x00B0;C for a maximum of 6&#x2009;months.</p>
</sec>
<sec id="sec4">
<title>Ulvan Extraction</title>
<p>Based on <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref>, 12.5&#x2009;g of ground lyophilized <italic>U. lactuca</italic> was resuspended in 200&#x2009;ml 50&#x2009;mM HCl pH 2 and was incubated at 90&#x00B0;C for 3&#x2009;h. After the extraction, the suspension was centrifuged for 10&#x2009;min at 7,000&#x2009;<italic>g</italic> at room temperature. The pH of the supernatant was adjusted to 3.5 by 1&#x2009;M NaOH and precipitated overnight by three volumes of ethanol at 4&#x00B0;C. The pellet was obtained by centrifugation for 10&#x2009;min at 7,000&#x2009;<italic>g</italic> at 10&#x00B0;C, and the precipitate was washed three times by 50, 75, and 100% ethanol, centrifuged, dried, and lyophilized.</p>
</sec>
<sec id="sec5">
<title>Preparation of AGP-Like Enriched Fraction</title>
<p>1&#x2009;g of ground freeze-dried <italic>U. lactuca</italic> was extracted with 4&#x2009;ml of extraction buffer: 50&#x2009;mM 4-morpholineethanesulfonic acid (MES) buffer pH 6, 0.2&#x2009;M CaCl<sub>2</sub>, and 1&#x2009;mM phenylmethylsulfonyl fluoride (PMSF). The extractions mixture was incubated 24&#x2009;h at 4&#x00B0;C using a rotary mixer. Extraction mixture was centrifuged at 22,000&#x2009;<italic>g</italic> for 20&#x2009;min at 4&#x00B0;C.</p>
<p>For purification, the column XK 16/40 (GE Healthcare, United States) was fully packed by Q Sepharose&#x00AE; Fast Flow resin (GE Healthcare, United States). Subsequently, 50&#x2009;ml of crude extract was 10 times diluted by 25&#x2009;mM MES buffer pH 6 and left overnight at 4&#x00B0;C to precipitate. The AGP-like glycoproteins remained in the supernatant after the extract precipitation. The extract was then centrifuged, filtered by 0.45&#x2009;&#x03BC;m, and loaded to the column by sample pump. The sample loading was followed by 200&#x2009;ml 25&#x2009;mM MES buffer pH 6 column wash, followed by 100&#x2009;ml buffer with 0.2&#x2009;M NaCl, and then step change to buffer with 0.5&#x2009;M NaCl and after that linear gradient to 1.2&#x2009;M NaCl on 150&#x2009;ml. The next step was linear gradient 1.2&#x2013;2&#x2009;M NaCl in buffer on 50&#x2009;ml. The column was reequilibrated by 200&#x2009;ml wash with 2&#x2009;M NaCl and 200&#x2009;ml 25&#x2009;mM MES buffer pH 6. The flow rate was 2.5&#x2009;ml&#x2219;min<sup>&#x2212;1</sup>. Localization of AGP-like glycoprotein in collected fractions was done by western blot assay and control for the presence of ulvan was done by TBO assay. Positive fractions were pulled together, desalted by dialysis using 100&#x2009;kDa MWCO dialysis tubing (Repligen, United States) for 3&#x2009;days against distilled water and lyophilized.</p>
</sec>
<sec id="sec6">
<title>Sodium Dodecylsulfate-Polyacrylamide Gel Electrophoresis and Western Blot</title>
<p>Samples were mixed with Laemmli sample buffer with a reducing agent, boiled for 10&#x2009;min and 4&#x2013;25&#x2009;&#x03BC;l were loaded on 4%&#x2013;15% Mini-PROTEAN&#x00AE; TGX Stain-Free&#x2122; precast polyacrylamide gels (Bio-Rad, United States). Gels were run at a constant current 200&#x2009;V for approximately 35&#x2009;min, and then they were stained by Pierce Silver Stain Kit (Thermo Fisher Scientific, United States). Separated proteins were transferred to the nitrocellulose membrane <italic>via</italic> the Trans-Blot Turbo system (Bio-Rad, United States), using the 10-min program for high molecular weight proteins, and were checked for the efficiency of transfer. The membrane was blocked with 5% low-fat milk in Tris-buffered saline (TBS) with 0.05% Tween 20 (v/v; TBST) overnight at 4&#x00B0;C on a rocking platform. JIM16 primary antibody (PlantProbes, United Kingdom) was used in 1:500 dilution in 5% low-fat milk in TBST for 1.5&#x2009;h at room temperature on a rocking platform 100&#x2009;rpm. After washing with TBST three times for 20&#x2009;min at room temperature on a rocking platform, blots were incubated with an anti-rat IgG secondary antibody (Sigma Aldrich, United States) coupled to horseradish peroxidase in dilution 1:10,000 in 5% low-fat milk in TBST for 1.5&#x2009;h at room temperature on the rocking platform 100&#x2009;rpm. After washing as described before, the membranes were developed in SuperSignal West Femto Maximum Sensitivity Substrate (Thermo Fisher Scientific, United States) for 5&#x2009;min at room temperature and the chemiluminescence was detected by ChemiDoc Imaging System (Bio-Rad, United States).</p>
</sec>
<sec id="sec7">
<title>FT-IR Analysis</title>
<p>FT-IR spectra (4,000&#x2013;400&#x2009;cm<sup>&#x2212;1</sup>) were measured on Nicolet 6700 FT-IR spectrometer (Thermo Fisher Scientific, United States) using KBr tablets (transmission), 64 scans were accumulated with a spectral resolution of 2.0&#x2009;cm<sup>&#x2212;1</sup>. The spectra were smoothed, baseline-corrected and the normalization has been done in Omnic 8.0 (Thermo Fisher Scientific, United States). Finally, the spectra were exported in ASCII format to Origin Pro software (Microcal Origin, United States) for the preparation of graphs.</p>
</sec>
<sec id="sec8">
<title>Determination of Sulfated Polysaccharides by Toluidine Blue O</title>
<p>Based on <xref ref-type="bibr" rid="ref46">Hahn et al. (2016)</xref>, toluidine blue O (TBO) was dissolved in 20&#x2009;mM maleic acid buffer pH 1 to a final concentration of 0.06&#x2009;mmol&#x00B7;L<sup>&#x2212;1</sup>. For measurement of calibration curves, ulvan (prepared according to the section &#x201C;Ulvan Extraction&#x201D;) and dextran sulfate in concentrations 0, 0.1, 0.25, 0.5, 0.75, and 1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup> were used. About 100&#x2009;&#x03BC;l of calibration or sample solutions were mixed with 900&#x2009;&#x03BC;l of TBO reagent, and the absorbance was measured at 632&#x2009;nm. For the blank measurement was used distilled water.</p>
</sec>
<sec id="sec9">
<title>Determination of Protein Content by Bicinchoninic Acid Assay</title>
<p>Protein content was measured by Bicinchoninic Acid (BCA) Protein Macro Assay Kit (Serva, DE) according to the product manual. Briefly, for measurement of calibration line, the bovine serum albumin in concentrations 0, 0.025, 0.05, 0.1, 0.25, 0.5, 0.75, and 1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup> was used. About 50&#x2009;&#x03BC;l of standards or samples were mixed with 1&#x2009;ml of BCA reagent. In blank measurement was used just distilled water. The solutions were incubated at 37&#x00B0;C for 30&#x2009;min and absorbance was read at 562&#x2009;nm.</p>
</sec>
<sec id="sec10">
<title>Determination of Total Saccharide Content by Anthrone Assay</title>
<p>Based on <xref ref-type="bibr" rid="ref130">Yemm and Willis (1954)</xref>, anthrone reagent was prepared by dissolving 0.2&#x2009;g of anthrone in a mixture of 5&#x2009;ml of ethanol and 95&#x2009;ml of 75% sulfuric acid on ice. For measurement of calibration line, glucose in concentrations 0, 0.01, 0.1, 1, 10, and 100&#x2009;&#x03BC;g&#x2219;ml<sup>&#x2212;1</sup> was used. The 100&#x2009;&#x03BC;l of samples (0.1&#x2009;mg&#x2219;ml<sup>&#x2212;1</sup>) or calibration solutions were mixed with 500&#x2009;&#x03BC;l of anthrone reagent on ice. Afterward, the mixture was incubated for 10&#x2009;min at 100&#x00B0;C, chilled on ice, and the saccharide content was determined spectrophotometrically at 625&#x2009;nm.</p>
</sec>
<sec id="sec11">
<title>Determination of Uronic Acid Content</title>
<p>Based on <xref ref-type="bibr" rid="ref14">Blumenkrantz and Asboe-Hansen (1973)</xref>, galacturonic acid was used for measurement of the calibration line in concentrations 0, 40, 80, 120, 160, 200, and 240&#x2009;&#x03BC;g&#x2219;ml<sup>&#x2212;1</sup>. Samples (1&#x2009;mg&#x2219;ml<sup>&#x2212;1</sup>) and calibration solutions were diluted by distilled water 1:4 to final volume 500&#x2009;&#x03BC;l and 3&#x2009;ml of 12.5&#x2009;mM sodium tetraborate decahydrate (0.478&#x2009;g dissolved in 100&#x2009;ml of 96% sulfuric acid) was added and the mixture was vortexed. The tubes were kept at 100&#x00B0;C for 5&#x2009;min, chilled on ice and 50&#x2009;&#x03BC;l of 0.15% (w/v) 3-hydroxybiphenyl in 0.5% NaOH was added. In the case of individual sample blank measurements, the use of 3-hydroxybiphenyl was omitted and only 0.5% NaOH was added. The solutions were vortexed and kept at room temperature for 30&#x2009;min. The absorbance was measured at 520&#x2009;nm. From the samples control solution of &#x03B2;-glucan (1&#x2009;mg&#x2219;mL<sup>&#x2212;1</sup>), as correction of neutral saccharide interference, was also subtracted.</p>
</sec>
<sec id="sec12">
<title>Saccharide Composition Analysis by High-Performance Anion-Exchange Chromatography</title>
<p>1&#x2009;mg of samples were dissolved in 1&#x2009;ml of 1&#x2009;M H<sub>2</sub>SO<sub>4</sub> and were hydrolyzed for 8&#x2009;h at 90&#x00B0;C. To neutralize the samples, 300&#x2009;mg of BaCO<sub>3</sub> were added and incubated overnight on vortex. Samples were centrifuged at 10,000&#x2009;g for 15&#x2009;min, the supernatants were filtrated, and pH was checked (<xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). If needed, samples were further diluted to get within the calibration range of the following analysis.</p>
<p>The samples were analyzed using high-performance anion-exchange chromatography (HPAEC) with pulsed amperometric detection (PAD) system Dionex DX-600 (Dionex, United States) with anion-exchange column CarboPac PA1, 2&#x2009;mm&#x2009;&#x00D7;&#x2009;250&#x2009;mm (Thermo Fisher Scientific, United States) for the possible presence of about 20 saccharides and sugar alcohols (modified method according to <xref ref-type="bibr" rid="ref48">Hardy et al., 1988</xref>; <xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref> and <xref ref-type="bibr" rid="ref83">Nagel et al., 2014</xref>). The Dionex ECD-50 detector (Dow, United States) was switched to the PAD mode. The injection volume was 10&#x2009;&#x03BC;l. The mobile phase flow rate was 0.25&#x2009;ml&#x2219;min<sup>&#x2212;1</sup>, and the column temperature was maintained at 25&#x00B0;C. The program starts at 0&#x2009;min with a column in 100&#x2009;mM NaOH, the NaOAc concentration is gradually increased to 240&#x2009;mM during 50&#x2009;min while maintaining the NaOH concentration at 100&#x2009;mmol&#x2219;L<sup>&#x2212;1</sup>. Then, within 0.5&#x2009;min, there is a change to 100&#x2009;mM NaOH/600&#x2009;mM NaOAc and in such a way regeneration takes place until 55&#x2009;min. Afterward, within 0.5&#x2009;min, there is a smooth change to 200&#x2009;mM NaOH regenerating the column until 58&#x2009;min, and finally within 0.5&#x2009;min there is another change to 100&#x2009;mM NaOH causing reequilibration of the column until 65&#x2009;min.</p>
</sec>
<sec id="sec13">
<title><italic>In vitro</italic> Antifungal Assay</title>
<p>Antifungal activity of AGP-like enriched fraction and ulvan was measured according to the method previously described by <xref ref-type="bibr" rid="ref56">Jind&#x0159;ichov&#x00E1; et al. (2014)</xref>. Briefly, GFP-tagged <italic>L. maculans</italic> (<xref ref-type="bibr" rid="ref105">&#x0160;a&#x0161;ek et al., 2012b</xref>) was suspended into 5&#x2009;&#x00D7;&#x2009;10<sup>4</sup> spore&#x2219;ml<sup>&#x2212;1</sup> in a Gamborg B5 medium (Duchefa, Netherlands) supplemented with 0.3% sucrose and 10&#x2009;mM MES pH 6.8. About 50&#x2009;&#x03BC;l of conidia suspension was pipetted into black 96-well plate and then added 50&#x2009;&#x03BC;l of test solutions (final concentration 0.01, 0.05, and 0.1&#x2009;mg&#x2219;ml<sup>&#x2212;1</sup>). AGP-like enriched fraction and ulvan were dissolved in 10&#x2009;mM MES pH 6.8. As a growth control, 10&#x2009;mM MES pH 6.8 was used. As positive control, 32&#x2009;mM tebuconazole was used in form of commercial fungicide Horizon 250 EW (Bayer CropScience AG, Germany). The covered and micropore tape sealed plate was cultivated at 26&#x00B0;C and in the dark. Relative fluorescence was measured using Infinite F200 plate reader (TECAN, Switzerland) with filters for excitation 485/20&#x2009;nm and for emission 535/25&#x2009;nm every 24&#x2009;h for 5&#x2009;days. Fluorescent values were averaged for each treatment and difference between 96 and 0&#x2009;h of control treatment was set as 100% of growth of <italic>L. maculans</italic>.</p>
</sec>
<sec id="sec14">
<title>Plant Treatment</title>
<p>Cotyledons of 12-day-old plants were used for AGP-like enriched fraction and ulvan solutions treatment. Lyophilized extracts of AGP-like enriched fraction and ulvan were dissolved in distilled water. For dissolving, solutions were slightly heated in water bath. As negative control treatment with distilled water was used and as positive control 32&#x2009;&#x03BC;M benzothiadiazole (BTH), a synthetic analogue of salicylic acid, in the form of the commercial preparation Bion 50WG (Syngenta, Zambia) was used in induced resistance test. For all experiments, 12 plants were used for each treatment. Cotyledons were treated by infiltration using a syringe without needle until full leaf saturation. The final concentrations of AGP-like enriched fraction and ulvan were 0.01, 0.02, 0.05, and 0.1&#x2009;mg&#x2219;ml<sup>&#x2212;1</sup>.</p>
</sec>
<sec id="sec15">
<title>Induced Resistance Test</title>
<p>The 14-day-old plants were inoculated by conidia suspension of <italic>L. maculans</italic> in concentration 10<sup>5</sup> spore&#x2219;ml<sup>&#x2212;1</sup>. Inoculation was performed by infiltration using needleless syringe until complete leaf saturation. Infected leaves were evaluated by image analysis using the APS Asses 2.0 software (APS Press, United States). The lesion area relative to the cotyledon area was averaged for each treatment and compared to the control (water) treatment, representing 100%.</p>
</sec>
<sec id="sec16">
<title>Determination of Hydrogen Peroxide</title>
<p>Based on <xref ref-type="bibr" rid="ref118">Thordal-Christensen et al. (1997)</xref>, the presence of hydrogen peroxide was determined by the polymerization of 3,3&#x2032;-diaminobenzidine (DAB). DAB solution (1&#x2009;mg&#x2219;ml<sup>&#x2212;1</sup> in 10&#x2009;mM Tris/HCl pH 7.8) was infiltrated into the cotyledons by vacuum infiltration. Infiltrated leaves were incubated for 4&#x2009;h in dark at room temperature. Afterward, the chlorophyll was removed by several washes with 96% ethanol. Before scanning, the leaves were rehydrated by consecutive 75, 50, 25, and 0% ethanol washes. For longer storage were leaves kept in 50% glycerol. DAB forms a reddish&#x2013;brown polymerization product in the presence of H<sub>2</sub>O<sub>2</sub> and peroxidase (PX).</p>
</sec>
<sec id="sec17">
<title>Gene Transcription Analysis</title>
<p>RNA was isolated 24&#x2009;h after plant treatment with studied compounds using commercial kit Spectrum&#x2122; Plant Total RNA Kit (Sigma Aldrich, United States). About 100&#x2009;mg of plant material (10&#x2013;12 disks with radius 6&#x2009;mm) was used for isolation; four samples were collected from 12 plants. RNA was isolated according to the manufacturer manual and the concentration of isolated RNA was determined spectrophotometrically by NanoDrop 1000 (Thermo Scientific, United States). Isolated RNA (2.5&#x2009;&#x03BC;g) was treated with DNA-free&#x2122; DNA Removal Kit (Ambion, United States) to remove possible contamination by genomic DNA. Isolated RNA was transcribed to cDNA <italic>via</italic> reverse transcription using M-MLV RNase H-point mutant (Promega, United States) and anchored oligo dT21 primer (Metabion, Germany). The qPCR reaction contained the equivalent of 6.25&#x2009;ng of RNA in LightCycler&#x00AE; 480 SYBR Green I Master (Roche, Switzerland), in case of <italic>ACS2</italic> and <italic>NCED3</italic>, RNA equivalent was 25&#x2009;ng. The final volume of reaction was 10&#x2009;&#x03BC;l and was performed in a 96-well plate using LightCycler&#x00AE; 480 (Roche, Switzerland). The PCR conditions were 95&#x00B0;C for 10&#x2009;min followed by 45&#x2009;cycles of 95&#x00B0;C for 10&#x2009;s, 55&#x00B0;C for 20&#x2009;s, and 72&#x00B0;C for 20&#x2009;s, followed by a melting curve analysis. Threshold cycles and melting curves were calculated using LightCycler&#x00AE;480 software. Level of relative transcription was calculated with an efficiency correction and normalized to the reference gene <italic>Actin</italic>. A list of primers is shown in <xref ref-type="supplementary-material" rid="SM1">Supplementary Table S1</xref>.</p>
</sec>
<sec id="sec18">
<title>Statistical Analysis</title>
<p>The experiments were carried out in three independent biological replicates (i.e., three separate experiments not conducted in parallel at the same time). Data were analyzed using pair <italic>t</italic>-test or one-way ANOVA with <italic>post hoc</italic> Tukey test (<italic>p</italic>&#x2009;&#x003C;&#x2009;0.05). All statistical analysis were performed using GraphPad Prism 8 software.</p>
</sec>
</sec>
<sec id="sec19" sec-type="results">
<title>Results</title>
<sec id="sec20">
<title>Preparation of AGP-Like Enriched Fraction and Its Characterization</title>
<p>Based on physicochemical properties of both, AGPs and ulvan, ion-exchange (IEX) chromatography was chosen for their separation. In order to get rid of ulvan, purification procedure was optimized. The effectivity of separation was established based on the separation of AGP-like glycoproteins localized by western blot, and ulvan, whose localization was determined by TBO assay. The best results were achieved using Q Sepharose&#x00AE; Fast Flow resin and 25&#x2009;mM MES buffer pH 6 and for the elution gradient of 2&#x2009;M NaCl was chosen. The combination of step and linear elution gradient proved to be the most effective. Once the suitable protocol was found out, the purification was scaled up and the example chromatogram of chosen ion-exchange purification is presented in <xref ref-type="supplementary-material" rid="SM1">Supplementary Figure 1A</xref>.</p>
<p>The majority of proteins were localized within the peak containing AGP-like glycoproteins, represented by western blot positive fractions (<xref ref-type="supplementary-material" rid="SM1">Supplementary Figure S1B</xref>, lanes 6&#x2013;8). On the other hand, the ulvan peak represented by TBO positive fractions contained almost no proteins (<xref ref-type="supplementary-material" rid="SM1">Supplementary Figure S1B</xref>, lane 9). The results of the western blot showed the presence of two high molecular weight AGP-like glycoproteins in JIM16 positive fractions. These fractions were collected and dialyzed against water for 3&#x2009;days using a membrane with 100 kDa MWCO to desalt the sample and at the same time to remove low molecular weight compounds including the unwanted proteins. The dialyzed JIM16 positive fractions (AGP-like enriched fraction) were lyophilized afterwards and used for biological assays on plants.</p>
<p>Ulvan from <italic>U. lactuca</italic> was chosen as a control during the biological assays on plants, because of its well-documented elicitor activity. Ulvan from <italic>U. lactuca</italic> was prepared according to <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref> and the yield was approximately 18% (w/w). To check the result of ulvan extraction, the sample was analyzed by FT-IR analysis (<xref ref-type="supplementary-material" rid="SM1">Supplementary Figure 2</xref>).</p>
<p>The measured FT-IR spectrum corresponded well to the already measured spectra of ulvan in the literature and contained all the bands typical for ulvan structure (<xref ref-type="bibr" rid="ref102">Robic et al., 2009</xref>): the OH groups gave a signal at 3,420&#x2009;cm<sup>&#x2212;1</sup>, the uronic acids afforded expected signals at 1,634 and 1,428&#x2009;cm<sup>&#x2212;1</sup>, the sulfate groups absorbed at 1,258 and 1,225&#x2009;cm<sup>&#x2212;1</sup>, the glycosidic linkages absorbance band was at 1,138&#x2013;1,127&#x2009;cm<sup>&#x2212;1</sup>, and the sugar-rings signals were assigned in the range of 110 and 990&#x2009;cm<sup>&#x2212;1</sup> (<xref ref-type="supplementary-material" rid="SM1">Supplementary Figure 2B</xref>). However, some differences were noticed since the maximum absorption band at 1,135&#x2009;cm<sup>&#x2212;1</sup> (1,055&#x2009;cm<sup>&#x2212;1</sup> in <xref ref-type="bibr" rid="ref102">Robic et al., 2009</xref>), and a shoulder between 1,220 and 1,130&#x2009;cm<sup>&#x2212;1</sup> (not so significant in <xref ref-type="bibr" rid="ref102">Robic et al., 2009</xref>) were observed. Although the ulvan extraction was successful, spotted differences might be pointing out to the slightly different structure of ulvan or presence of contamination within the sample. The presence of the bands at 656 and 645&#x2009;cm<sup>&#x2212;1</sup> in the FT-IR spectrum suggested contamination by inorganic sulfates or phosphates.</p>
<p>Ulvan and AGP-like enriched fraction used for biological tests on plants were characterized mainly in terms of their glycosylation, which is assumed to be responsible for the AGPs functionality in plant development and defense responses (<xref ref-type="bibr" rid="ref72">Lopez-Hernandez et al., 2020</xref>; <xref ref-type="bibr" rid="ref124">Villa-Rivera et al., 2021</xref>).</p>
<p>Firstly, all the samples were analyzed in terms of the total protein content and composition of AGP-like glycoproteins (<xref rid="fig1" ref-type="fig">Figure 1A</xref>). Even though almost no proteins and mainly smear typical for polysaccharides could be seen in the case of the extracted ulvan (<xref rid="fig1" ref-type="fig">Figure 1A</xref>; lane 1), the presence of proteins confirms the contamination of extracted ulvan. The AGP-like enriched fraction contained a high amount of proteins with a molecular weight below 75 kDa (<xref rid="fig1" ref-type="fig">Figure 1A</xref>; lane 2). Surprisingly, even though the majority of the unwanted proteins had molecular weight below 75 kDa, they were not removed by 3-day 100 kDa MWCO dialysis at all. Nevertheless, the JIM16 antibody had a strong response with the sample after IEX purification (<xref rid="fig1" ref-type="fig">Figure 1B</xref>; lane 2). Besides, an almost invisible response could be seen also in extracted ulvan (<xref rid="fig1" ref-type="fig">Figure 1B</xref>; lane 1). These findings further correspond to their spectrophotometric analysis of protein, total saccharide, and uronic acid content (<xref rid="tab1" ref-type="table">Table 1</xref>).</p>
<fig position="float" id="fig1">
<label>Figure 1</label>
<caption><p>Protein characterization of arabinogalactan protein (AGP)-like enriched fraction (AGPs) and ulvan. Samples were analyzed using SDS-PAGE and silver staininig <bold>(A)</bold> and immunolabeling with anti-AGP JIM16 primary antibody, 10&#x2009;s exposition time <bold>(B)</bold>. (1) Ulvan; (2) AGPs. For the SDS-PAGE separation were used 4%&#x2013;15% gradient precast polyacrylamide gels. Prestained Protein Ladder&#x2014;Broad molecular weight (10&#x2013;245&#x2009;kDa, ab116028) was used.</p></caption>
<graphic xlink:href="fpls-13-893858-g001.tif"/>
</fig>
<table-wrap position="float" id="tab1">
<label>Table 1</label>
<caption><p>The characterisation of samples.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="center" valign="top" colspan="4">A&#x2014;Total content</th>
</tr>
<tr>
<th/>
<th align="center" valign="top">AGPs</th>
<th align="center" valign="top">Ulvan</th>
<th/>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">Protein</td>
<td align="left" valign="top">0.346&#x2009;&#x00B1;&#x2009;0.027</td>
<td align="left" valign="top">0.041&#x2009;&#x00B1;&#x2009;0.004</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Total saccharides</td>
<td align="left" valign="top">0.191&#x2009;&#x00B1;&#x2009;0.027</td>
<td align="left" valign="top">0.276&#x2009;&#x00B1;&#x2009;0.037</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Uronic acids</td>
<td align="left" valign="top">0.082&#x2009;&#x00B1;&#x2009;0.002</td>
<td align="left" valign="top">0.200&#x2009;&#x00B1;&#x2009;0.010</td>
<td/>
</tr>
<tr>
<td align="left" valign="top" colspan="4"><bold>B&#x2014;Neutral monosaccharide composition</bold></td>
</tr>
<tr>
<td align="left" valign="top"><bold>Retention time (min)</bold></td>
<td align="center" valign="top"><bold>AGPs</bold></td>
<td align="center" valign="top"><bold>Ulvan</bold></td>
<td/>
</tr>
<tr>
<td align="left" valign="top">2.93</td>
<td align="left" valign="top">1.4&#x2009;&#x00B1;&#x2009;0.3</td>
<td align="center" valign="top">Traces</td>
<td align="left" valign="top">Fucose</td>
</tr>
<tr>
<td align="left" valign="top">3.15</td>
<td align="left" valign="top">27.7&#x2009;&#x00B1;&#x2009;2.3</td>
<td align="left" valign="top">6.8&#x2009;&#x00B1;&#x2009;0.5</td>
<td align="left" valign="top">3-<italic>O</italic>-methyl-hexose<xref rid="tfn1" ref-type="table-fn"><sup>a</sup></xref>
</td>
</tr>
<tr>
<td align="left" valign="top">3.42</td>
<td align="left" valign="top">15.7&#x2009;&#x00B1;&#x2009;0.5</td>
<td align="left" valign="top">71.5&#x2009;&#x00B1;&#x2009;2.8</td>
<td align="left" valign="top">Rhamnose</td>
</tr>
<tr>
<td align="left" valign="top">3.92</td>
<td align="left" valign="top">12.5&#x2009;&#x00B1;&#x2009;0.3</td>
<td align="center" valign="top">n.d.</td>
<td align="left" valign="top">-<xref rid="tfn2" ref-type="table-fn"><sup>b</sup></xref>
</td>
</tr>
<tr>
<td align="left" valign="top">4.13</td>
<td align="left" valign="top">10.0&#x2009;&#x00B1;&#x2009;0.8</td>
<td align="center" valign="top">Traces</td>
<td align="left" valign="top">Arabinose</td>
</tr>
<tr>
<td align="left" valign="top">4.63</td>
<td align="left" valign="top">15.5&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="left" valign="top">0.8&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="left" valign="top">-<xref rid="tfn2" ref-type="table-fn"><sup>b</sup></xref>
</td>
</tr>
<tr>
<td align="left" valign="top">4.83</td>
<td align="left" valign="top">4.5&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="left" valign="top">2.3&#x2009;&#x00B1;&#x2009;0.2</td>
<td align="left" valign="top">Mannose</td>
</tr>
<tr>
<td align="left" valign="top">5.05</td>
<td align="left" valign="top">7.3&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="left" valign="top">9.8&#x2009;&#x00B1;&#x2009;0.2</td>
<td align="left" valign="top">Galactose</td>
</tr>
<tr>
<td align="left" valign="top">5.07</td>
<td align="left" valign="top">1.8&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="center" valign="top">traces</td>
<td align="left" valign="top">Glucose</td>
</tr>
<tr>
<td align="left" valign="top">5.27</td>
<td align="left" valign="top">3.8&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="left" valign="top">8.0&#x2009;&#x00B1;&#x2009;0.5</td>
<td align="left" valign="top">Xylose</td>
</tr>
<tr>
<td align="left" valign="top" colspan="4"><bold>C&#x2014;Negatively charged monosaccharide composition</bold></td>
</tr>
<tr>
<td align="left" valign="top"><bold>Retention time (min)</bold></td>
<td align="center" valign="top"><bold>AGPs</bold></td>
<td align="center" valign="top"><bold>Ulvan</bold></td>
<td/>
</tr>
<tr>
<td align="left" valign="top">25.15</td>
<td align="left" valign="top">13.9&#x2009;&#x00B1;&#x2009;0.9</td>
<td align="center" valign="top">n.d.</td>
<td align="left" valign="top">-<xref rid="tfn3" ref-type="table-fn"><sup>c</sup></xref>
</td>
</tr>
<tr>
<td align="left" valign="top">25.83</td>
<td align="left" valign="top">23.4&#x2009;&#x00B1;&#x2009;0.3</td>
<td align="center" valign="top">n.d.</td>
<td align="left" valign="top">Galacturonic acid</td>
</tr>
<tr>
<td align="left" valign="top">27.65</td>
<td align="left" valign="top">30.7&#x2009;&#x00B1;&#x2009;0.8</td>
<td align="left" valign="top">33.4&#x2009;&#x00B1;&#x2009;1.3</td>
<td align="left" valign="top">Glucuronic acid</td>
</tr>
<tr>
<td align="left" valign="top">33.90</td>
<td align="left" valign="top">3.7&#x2009;&#x00B1;&#x2009;0.1</td>
<td align="left" valign="top">6.4&#x2009;&#x00B1;&#x2009;0.2</td>
<td align="left" valign="top">Iduronic acid</td>
</tr>
<tr>
<td align="left" valign="top">36.47</td>
<td align="left" valign="top">28.4&#x2009;&#x00B1;&#x2009;0.2</td>
<td align="left" valign="top">60.2&#x2009;&#x00B1;&#x2009;1.9</td>
<td align="left" valign="top">-<xref rid="tfn3" ref-type="table-fn"><sup>c</sup></xref>
</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><bold>(A)</bold> Basic characterization of the samples by spectrophotometric methods. Protein, total saccharide, and uronic acid mass fraction of Ulva lactuca ulvan, and AGP-like enriched fraction. Protein content was measured by the Bicinchoninic Acid (BCA) method, total saccharide content by anthrone method, and uronic acid content by the 3-hydroxybiphenyl method. Values in the table represent the mean&#x2009;&#x00B1;&#x2009;SE (<italic>n</italic>&#x2009;=&#x2009;9, collected from three independent experiments). <bold>(B)</bold> Neutral monosaccharide composition (mass % of total neutral saccharides) of Ulva lactuca ulvan, and AGP-like enriched fraction. Values in the table represent the mean&#x2009;&#x00B1;&#x2009;SE (<italic>n</italic>&#x2009;=&#x2009;9, collected from three independent experiments). <bold>(C)</bold> Negatively charged monosaccharide composition (mass % of total negatively charged monosaccharides) of Ulva lactuca ulvan, and AGP-like enriched fraction. Values in the table represent the mean&#x2009;&#x00B1;&#x2009;SE (<italic>n</italic>&#x2009;=&#x2009;4, collected from two independent experiments).</p>
<fn id="tfn1">
<label>a</label>
<p>Approximate content, the concentration calculated with a coefficient of 3-<italic>O</italic>-methyl-glucose.</p>
</fn>
<fn id="tfn2">
<label>b</label>
<p>Approximate content, the concentration calculated with average coefficient of all standards.</p>
</fn>
<fn id="tfn3">
<label>c</label>
<p>Approximate content, the concentration calculated with an average coefficient of all uronic acid standards.</p>
</fn>
<p>Traces: content&#x2009;&#x003C;&#x2009;0.5%; n.d., not detected.</p>
</table-wrap-foot>
</table-wrap>
<p>The neutral saccharide composition differed greatly between the samples (<xref rid="tab1" ref-type="table">Table 1B</xref>). Although the ulvan composition corresponded to the information present in the literature, surprising was the presence of unidentified monosaccharides (<xref ref-type="bibr" rid="ref128">Yaich et al., 2013</xref>). One of these unidentified monosaccharides (retention time 3.15&#x2009;min) was previously identified as 3-<italic>O</italic>-methyl-hexose, possibly 3-<italic>O</italic>-methyl-galactose, which has never been described in ulvan structure and might originate from the contaminating proteins (<xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). This saccharide was the most prevalent saccharide within AGP-like enriched fraction, followed by rhamnose, saccharide with retention time 4.63&#x2009;min, saccharide with retention time min 3.92&#x2009;min, and arabinose. The content of the remaining saccharides did not exceed 10%. Interestingly, the saccharide with retention time 3.92&#x2009;min could be found only in this sample.</p>
<p>Moreover, the composition of negatively charged monosaccharides was completely different too (<xref rid="tab1" ref-type="table">Table 1C</xref>). Ulvan negatively charged monosaccharide composition is almost identical to the <italic>Ulva</italic> extract with the majority of negatively charged monosaccharide with retention time 36.47&#x2009;min. The data for <italic>Ulva</italic> extract were previously published in <xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al. (2021)</xref>. After IEX purification of <italic>Ulva</italic> extract the amount of this unidentified negatively charged monosaccharide, glucuronic, and iduronic acid decreased, whereas a significant amount of negatively charged monosaccharide with retention time 25.15&#x2009;min and galacturonic acid appeared in the sample.</p>
<p>For the simplification, the term AGP-like enriched fraction will be in following text shortened to AGPs. It is a mixture of AGP-like glycoproteins and other proteins. However, low molecular weight compounds such as phytohormones and the vast majority of ulvans were removed from the sample during preparation. It is important to keep in mind that the structure and composition of <italic>U. lactuca</italic> AGP-like glycoproteins differ significantly from the AGPs of classical terrestrial plants (<xref ref-type="bibr" rid="ref106">Seifert and Roberts, 2007</xref>; <xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>).</p>
</sec>
<sec id="sec21">
<title>AGP-Like Enriched Fraction Protects <italic>Brassica napus</italic> Against <italic>Leptosphaeria maculans</italic></title>
<p>The protection efficacy of five different concentrations of algal elicitors (AGPs or ulvan) in <italic>B. napus</italic> against <italic>L. maculans</italic> was assessed by infiltration of <italic>B. napus</italic> cotyledons 2&#x2009;days prior to inoculation with the pathogen. Once the lesions have developed (11&#x2009;days after inoculation), the cotyledons were scanned to evaluate the lesion area (<xref rid="fig2" ref-type="fig">Figure 2A</xref>).</p>
<fig position="float" id="fig2">
<label>Figure 2</label>
<caption><p>Effect of algal elicitors on the progression of <italic>L. maculans</italic> infection in <italic>B. napus</italic> cotyledons. Cotyledons were treated with AGP-like enriched fraction (AGPs), ulvan extracted according to <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref> (Ulvan), distilled water (negative control), and 32&#x2009;&#x03BC;M BTH (benzothiadiazole, positive control) 2&#x2009;days before inoculation with <italic>L. maculans</italic>. Symptoms of <italic>L. maculans</italic> infection on cotyledons of <italic>B. napus</italic> 11&#x2009;days after inoculation <bold>(A)</bold>. Disease symptoms were evaluated as a percentage of the lesion area to the leaf area 11&#x2009;days after inoculation <bold>(B)</bold>. The algal elicitors were tested in concentrations 0.01, 0.02, 0.05, 0.1, and 1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup>. The graph presented data from three biological replicates. Statistically significant differences determined by the one-way ANOVA and Tukey <italic>post-hoc</italic> test (<italic>p</italic>&#x2009;&#x003C;&#x2009;0.05). Each column is presented as the mean&#x2009;&#x00B1;&#x2009;SE (<italic>n</italic>&#x2009;=&#x2009;72). Different letters indicate significant difference.</p></caption>
<graphic xlink:href="fpls-13-893858-g002.tif"/>
</fig>
<p>The grey-brown areas represent the <italic>L. maculans</italic> lesions. From the images themselves it was obvious, that AGPs caused a significant reduction in disease progression in concentration-dependent manner with concentration 1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup> being as effective as 32&#x2009;&#x03BC;M benzothiadiazole (BTH), which was used as a positive control. BTH is a synthetic analog of salicylic acid able to induce SA-mediated stress response, which plays a major role in the defense against hemibiotrophic pathogens. Moreover, the lesion area was evaluated by image analysis, when the lesion area relative to the cotyledon area was averaged for each treatment and compared to the control treatment, expressed as 100%. Each treatment was represented by 12 plants and the whole experiment was repeated three times (<xref rid="fig2" ref-type="fig">Figure 2B</xref>).</p>
<p>The concentration-dependent effect of AGPs on the reduction of <italic>L. maculans</italic> infection is even more profound from the graph (<xref rid="fig2" ref-type="fig">Figure 2B</xref>). As positive control was used treatment with BTH, which diminished infection propagation by 99%&#x2013;92% compared to control plants. Even the second-lowest tested concentration (0.02&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup>) led to a decrease in the relative area of lesions by 45%&#x2013;30%. The pretreatment with the highest tested concentration (1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup>) resulted in a major reduction of infection propagation by 94%&#x2013;83%, which was almost as efficient as the use of commercial elicitor BTH. Unexpectedly, the ulvan pretreatment had much lower elicitor activity, when only the highest tested concentration caused a statistically significant drop in lesion relative area by 47%&#x2013;15%. Besides, greater variability between individual biological repetitions could be observed in the case of ulvan results, especially at higher concentrations.</p>
</sec>
<sec id="sec22">
<title>AGP-Like Enriched Fraction Did Not Display Any Direct Antifungal Activity Against <italic>Leptosphaeria maculans</italic></title>
<p>To exclude a direct antifungal effect of the tested compounds, the direct antifungal effect of AGPs and ulvan on <italic>L. maculans</italic> was examined <italic>in vitro</italic>. The assay showed that the relative fluorescence of growing mycelium of <italic>L. maculans</italic> did not significantly differ among the control and AGPs. Interestingly, ulvan in all tested concentrations improved <italic>L. maculans</italic> growth (<xref rid="fig3" ref-type="fig">Figure 3</xref>).</p>
<fig position="float" id="fig3">
<label>Figure 3</label>
<caption><p>Antifungal effect of AGP-like enriched fraction (AGPs) and ulvan on <italic>L. maculans</italic> growth. Spores of <italic>L. maculans</italic> tagged with GFP were cultivated with different concentrations of AGPs and ulvan extracted according to <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref> (Ulvan) for 96&#x2009;h in a microtitre plate. The growth of mycelium was quantified as an increase in GFP fluorescence. The data are presented as the mean&#x2009;&#x00B1;&#x2009;SE values (<italic>n</italic>&#x2009;=&#x2009;6). Statistically significant differences determined by the <italic>t</italic>-test are marked either with an <sup>&#x002A;</sup><italic>p</italic>&#x2009;&#x003C;&#x2009;0.05 or <sup>&#x002A;&#x002A;</sup><italic>p</italic>&#x2009;&#x003C;&#x2009;0.01, all samples were compared to the control (10&#x2009;mM MES pH 6.8).</p></caption>
<graphic xlink:href="fpls-13-893858-g003.tif"/>
</fig>
</sec>
<sec id="sec23">
<title>AGP-Like Enriched Fraction Induced Production of H<sub>2</sub>O<sub>2</sub> in <italic>Brassica napus</italic> Cotyledons</title>
<p>Hydrogen peroxide represents important ROS, which has been shown to participate in cell signaling regulation, differentiation, programmed cell death, cell wall formation, and stress responses to both abiotic and biotic factors (<xref ref-type="bibr" rid="ref51">Huang et al., 2019</xref>).</p>
<p>The formation of ROS is the first defense response of plants to biotic and abiotic stress and was suggested to play a pivotal role in the establishment of SAR with H<sub>2</sub>O<sub>2</sub> as intra- and intercellular messenger (<xref ref-type="bibr" rid="ref7">Barna et al., 2012</xref>). Thus, the effect of AGPs from <italic>U. lactuca</italic> and extracted ulvan on the formation of H<sub>2</sub>O<sub>2</sub> was examined (<xref rid="fig4" ref-type="fig">Figure 4A</xref>).</p>
<fig position="float" id="fig4">
<label>Figure 4</label>
<caption><p>Effect of algal elicitor treatment on accumulation of H<sub>2</sub>O<sub>2</sub> and expression of <italic>respiratory burst oxidase homologues</italic> (<italic>RBOHs</italic>) in <italic>B. napus</italic> cotyledons. Accumulation of H<sub>2</sub>O<sub>2</sub> in <italic>B. napus</italic> cotyledons <bold>(A)</bold>. Cotyledons (12-day-old) were treated with AGP-like enriched fraction (AGPs), ulvan extracted according to <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref> (Ulvan), and distilled water (Control) by infiltration, the algal elicitors were tested in concentrations 0.01, 0.1, and 1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup>. H<sub>2</sub>O<sub>2</sub> was detected 24&#x2009;h after treatment using 3,3&#x2032;-diaminobenzidine, the presence of H<sub>2</sub>O<sub>2</sub> is represented by brown-red coloring. Expression of <italic>RBOHs</italic> in <italic>B. napus</italic> cotyledons <bold>(B)</bold>. Cotyledons were treated with AGP-like enriched fraction (AGPs), ulvan (Ulvan), and distilled water (Control) by infiltration in 0.1&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup> concentration. After 24&#x2009;h, gene expressions of <italic>RBOH D</italic> and <italic>RBOH F</italic> were analyzed. Data from the representative experiment are shown. Relative expression was calculated with efficiency correction and normalization to <italic>actin</italic>. Data are plotted at the log<sub>10</sub> scale. Asterisks indicate statistically significant differences from control determined by the <italic>t</italic>-test <sup>&#x002A;&#x002A;</sup><italic>p</italic>&#x2009;&#x003C;&#x2009;0.01.</p></caption>
<graphic xlink:href="fpls-13-893858-g004.tif"/>
</fig>
<p>The infiltration of AGPs sample into the cotyledons of <italic>B. napus</italic> leads to the accumulation of H<sub>2</sub>O<sub>2</sub> in a concentration-dependent manner. Only weak accumulation of H<sub>2</sub>O<sub>2</sub> was detected after treatment with ulvan regardless of the concentration used. In the case of water infiltration, H<sub>2</sub>O<sub>2</sub> accumulation was not observed. To determine the origin of produced hydrogen peroxide, relative gene expression of two NADPH oxidases, also called respiratory burst oxidase homologues (RBOHs) was assessed (<xref rid="fig4" ref-type="fig">Figure 4B</xref>). Although RBOH family has more members, RBOH D and RBOH F are believed to be the key players in the ROS production during the stress responses (<xref ref-type="bibr" rid="ref23">Chapman et al., 2019</xref>).</p>
<p>Treatment of <italic>B. napus</italic> cotyledons with AGPs and ulvan 24&#x2009;h prior measurement resulted in increased expression of <italic>RBOH F</italic> by 2.9- and 1.9-fold compared to control, respectively. In the case of <italic>RBOH D</italic>, the expression level remained unchanged.</p>
</sec>
<sec id="sec24">
<title>AGP-Like Enriched Fraction Induced Expression of Plant Defense Genes</title>
<p>To further understand the mechanisms behind improved <italic>B. napus</italic> resistance to <italic>L. maculans</italic> infection, the effect of AGPs on the activation of signaling pathways was tested and compared to control and ulvan treatment. Marker genes linked to the individual signaling pathways were chosen and their changes in expression 24&#x2009;h after elicitor infiltration were observed. Corresponding to the previous results of inoculation assay, the treatment with AGPs caused statistically significant changes of gene expression in the <italic>B. napus</italic> cotyledons (<xref rid="fig5" ref-type="fig">Figure 5</xref>).</p>
<fig position="float" id="fig5">
<label>Figure 5</label>
<caption><p>Effect of algal elicitor treatment on activation of plant defense pathways in <italic>B. napus</italic> cotyledons. Cotyledons were treated with AGP-like enriched fraction (AGPs), ulvan extracted according to <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref> (Ulvan) and distilled water (Control) by infiltration in 0.1&#x2009;mg&#x00B7;mL<sup>&#x2212;1</sup> concentration. After 24&#x2009;h, gene expressions of marker genes of salicylic acid pathway (<italic>PR1</italic>, <italic>ICS1</italic>, and <italic>PAL1</italic>), ethylene pathway (<italic>ACS2</italic>), ethylene/jasmonic acid pathway (<italic>&#x03B2;CHI</italic>), jasmonic acid (<italic>VSP</italic> and <italic>AOS</italic>), and abscisic acid (<italic>RD26</italic>, <italic>NCED3</italic>) were analyzed. Data from the representative experiment are shown. Relative expression was calculated with efficiency correction and normalization to <italic>actin</italic>. Data are plotted at the log<sub>10</sub> scale. Asterisks indicate statistically significant differences from control determined by the <italic>t</italic>-test <sup>&#x002A;</sup><italic>p</italic>&#x2009;&#x003C;&#x2009;0.05 or <sup>&#x002A;&#x002A;</sup><italic>p</italic>&#x2009;&#x003C;&#x2009;0.01.</p></caption>
<graphic xlink:href="fpls-13-893858-g005.tif"/>
</fig>
<p>The relative expression of the nine genes involved in <italic>B. napus</italic> defense reactions&#x2014;namely, <italic>pathogenesis-related gene 1</italic> (<italic>PR1</italic>), <italic>isochorismate synthase 1</italic> (<italic>ICS1</italic>), <italic>phenylalanine ammonia-lyase</italic> (<italic>PAL</italic>), <italic>ACC synthase</italic> (<italic>ACS2</italic>), <italic>&#x03B2;-chitinase</italic> (<italic>&#x03B2;CHI</italic>), <italic>vegetative storage protein</italic> (<italic>VSP</italic>), <italic>allene oxide synthase</italic> (<italic>AOS</italic>), transcription factor <italic>responsive to desiccation 26</italic> (<italic>RD26</italic>), and <italic>9-cis-epoxycarotenoid dioxygenase 3</italic> (<italic>NCED3</italic>)&#x2014;were analyzed using RT-qPCR in water- (Control), AGPs-, and ulvan-treated plants. The treatment with AGPs led to the activation of the salicylic acid signaling pathway based on increased expression of SA responsive gene <italic>PR1</italic> (94.4-fold) as well as SA biosynthetic gene <italic>ICS1</italic> (8.9-fold). Though, the biggest change in gene expression could be observed in the case of <italic>ACS2</italic> (316.6-fold), pointing to strong activation of ethylene signaling pathway. Although the elevated level of <italic>&#x03B2;CHI</italic> expression (95.9-fold) indicates the involvement of the JA/ET signaling pathway, marker genes for jasmonic acid pathway <italic>AOS</italic> and <italic>VSP</italic> were downregulated by 0.4- and 0.2-fold, respectively. On contrary, ulvan in addition to the upregulation of <italic>&#x03B2;CHI</italic> (3.8-fold) also increased expression of <italic>VSP</italic> (2.6-fold), suggesting activation of JA/ET signaling pathway. Moreover, marker genes of abscisic acid pathway, <italic>RD26</italic> and <italic>NCED3</italic>, were downregulated by both AGPs (0.6- and 0.6-fold) and ulvan (0.6- and 0.7-fold). The changes in expression of the other marker genes were not statistically significant. The results suggest an unusual synergistic role of SA and ET signaling pathways during the AGPs induced resistance.</p>
</sec>
</sec>
<sec id="sec25" sec-type="discussions">
<title>Discussion</title>
<p>Seaweed extracts are already used in agriculture for their growth-promoting activity and ability to enhance plant stress tolerance for decades (<xref ref-type="bibr" rid="ref10">Battacharyya et al., 2015</xref>). Although <italic>Ascophyllum nodosum</italic> products are the most commercially used (<xref ref-type="bibr" rid="ref107">Sharma et al., 2014</xref>), <italic>Ulva</italic> sp. extracts have also high potential and have been the topic of various research papers (<xref ref-type="bibr" rid="ref30">Dominguez and Loret, 2019</xref>). The most crucial challenge in seaweed biostimulant development is to choose the right extraction protocol, which will harvest all desired molecules with biostimulant activity. The protocol immensely affects the composition of final product and various protocols were established over the years. Although novel extraction technologies such as supercritical fluid extraction or microwave-assisted extraction are available, at the industrial level, the most common method is heating of algal biomass with potassium or sodium hydroxide solutions under pressure. Such harsh conditions can lead to the loss of some bioactive compounds plus result in uncontrolled fragmentation of polysaccharide chains, which consequently affect the biostimulant activity of the formulation (<xref ref-type="bibr" rid="ref37">El Boukhari et al., 2020</xref>; <xref ref-type="bibr" rid="ref2">Ali et al., 2021</xref>). Our results show, that even mild buffer extraction yields high amounts of proteins and saccharides with biostimulant activity within our extract. The eliciting activity of seaweed extracts is mainly attributed to the sulfated polysaccharides presented in their cell walls (<xref ref-type="bibr" rid="ref112">Stadnik and Freitas, 2014</xref>). Nevertheless, algae contain a tremendous number of other biomolecules with potential biostimulant activity and AGPs belong to them. AGPs play a crucial role in higher plant defense responses and plant-microbe interactions (<xref ref-type="bibr" rid="ref87">Nguema-Ona et al., 2013</xref>; <xref ref-type="bibr" rid="ref75">Mareri et al., 2019</xref>), and their presence was confirmed also in brown and green algae (<xref ref-type="bibr" rid="ref38">Estevez et al., 2009</xref>; <xref ref-type="bibr" rid="ref50">Herv&#x00E9; et al., 2015</xref>; <xref ref-type="bibr" rid="ref73">Ma et al., 2017</xref>; <xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). To test the ability of <italic>U. lactuca</italic> AGP-like glycoproteins to elicit defense responses and enhance stress resistance of higher plants, an AGP-like enriched sample containing approximately one-third of AGP-like glycoproteins was prepared by IEX chromatography. The ulvan extracted from <italic>U. lactuca</italic> was used for comparison. It activates plant immunity through the RBOH-dependent JA signaling pathway without inducing hypersensitive response (HR; <xref ref-type="bibr" rid="ref55">Jaulneau et al., 2010</xref>; <xref ref-type="bibr" rid="ref43">Freitas and Stadnik, 2015</xref>; <xref ref-type="bibr" rid="ref76">Martin et al., 2020</xref>).</p>
<p>Up to now, seven studies focusing on the effects of different <italic>Ulva</italic> spp. extracts on plant infections with pathogens were published. Most of the studies used identical extraction protocol based on <xref ref-type="bibr" rid="ref26">Cluzet et al. (2004)</xref>, where dried <italic>Ulva</italic> material was autoclaved in distilled water, followed by ethanol precipitation. Some of the studies then call their product ulvan or some more generally as <italic>Ulva</italic> extract. In this study, ulvan was prepared according to <xref ref-type="bibr" rid="ref128">Yaich et al. (2013)</xref> and based on excellent review of ulvan extractions done by <xref ref-type="bibr" rid="ref60">Kidgell et al. (2019)</xref>; our protocol should have high extraction yield, selectivity and low degradation. Only six studies also tried to analyze their products, mainly by means of spectrophotometric analyses, monosaccharide composition, and FT-IR analyses (<xref ref-type="bibr" rid="ref26">Cluzet et al., 2004</xref>; <xref ref-type="bibr" rid="ref94">Paulert et al., 2009</xref>, <xref ref-type="bibr" rid="ref93">2010</xref>; <xref ref-type="bibr" rid="ref54">Jaulneau et al., 2011</xref>; <xref ref-type="bibr" rid="ref702">Hern&#x00E1;ndez-Herrera et al., 2014</xref>; <xref ref-type="bibr" rid="ref701">Borba et al., 2019</xref>). Ulvan is mainly composed of rhamnose and glucuronic acid with the main repeating disaccharide unit (&#x2192;4)-&#x03B2;-<sc>d</sc>-GlcA<italic>p</italic>-(1&#x2009;&#x2192;&#x2009;4)-&#x03B1;-<sc>l</sc>-Rha<italic>p</italic>-(1&#x2192;, in which glucuronic acid can be replaced to a certain extent by iduronic acid or xylose). Sulfation occurs mainly on C3 of the rhamnose and also C2 of the xylose or glucuronic acid (<xref ref-type="bibr" rid="ref703">Lahaye and Robic, 2007</xref>; <xref ref-type="bibr" rid="ref60">Kidgell et al., 2019</xref>). Although our results of ulvan analyses agrees with previously published data, outstanding is the presence of 3-<italic>O</italic>-methyl-hexose and unidentified saccharides, which possibly comes from contaminating glycoproteins. The most intriguing is the nature of negatively charged monosaccharide with retention time 36.47&#x2009;min. Nevertheless, based on the knowledge of ulvan composition and the separation principle of the HPAEC/PAD technique, its long elution time indicates a strongly polar nature suggesting that we are dealing with a sulfated monosaccharide such as rhamnose-3-sulfate, which would correspond to its high content in ulvan (<xref ref-type="bibr" rid="ref117">Templeton et al., 2012</xref>; <xref ref-type="bibr" rid="ref128">Yaich et al., 2013</xref>). The composition of AGP-like enriched samples differs greatly from ulvan containing greater variety of monosaccharides and even more unidentified ones including rhamnose-3-sulfate. If true, the origin of this sulfated monosaccharide in the sample purified by ion-exchange chromatography, which should not contain ulvan, remains unknown. However, the correlation between sulfation and salt tolerance was previously proven (<xref ref-type="bibr" rid="ref4">Aquino et al., 2011</xref>). Thus, the hypothetical presence of sulfated monosaccharide within AGP-like glycoproteins might be an adaptation to the marine environment. The other unidentified negatively charged monosaccharide with retention time 25.15&#x2009;min is most probably 4-<italic>O</italic>-methyl-glucuronic acid, which would be in agreement with <xref ref-type="bibr" rid="ref95">Pfeifer et al. (2020)</xref>, who found out that <italic>Zostera marina</italic> AGPs contained high amounts of glucuronic acid and terminal 4-<italic>O</italic>-methyl-glucuronic acids, rare to land plant AGPs. We hypothesize, that the presence of unusual, modified monosaccharides might play an important role in eliciting plant resistance against the pathogen. The presence of galacturonic acid is interesting since it has rarely been described as part of AGP glycans (<xref ref-type="bibr" rid="ref115">Tan et al., 2013</xref>). Though, high content of galacturonic acid and glucuronic acid was also identified in AGP-like glycoproteins of <italic>Micrasterias denticulata</italic> (<xref ref-type="bibr" rid="ref36">Eder et al., 2008</xref>), which pointed out to the unique glycosylation of algal AGP-like glycoproteins. The high content of uronic acids was proposed as a specific adaptation to the marine environment, thanks to their calcium-binding capacity and the ability of calcium ions to protect plants from harmful effects of salt stress (<xref ref-type="bibr" rid="ref63">Lahaye and Epstein, 1969</xref>, <xref ref-type="bibr" rid="ref64">1971</xref>; <xref ref-type="bibr" rid="ref28">Cramer et al., 1985</xref>; <xref ref-type="bibr" rid="ref95">Pfeifer et al., 2020</xref>). The ion-binding capacity of AGPs can be fine-tuned according to environmental factors (<xref ref-type="bibr" rid="ref66">Lamport and V&#x00E1;rnai, 2013</xref>; <xref ref-type="bibr" rid="ref95">Pfeifer et al., 2020</xref>). Moreover, the essential role of pH-dependent periplasmic AGP&#x2013;Ca<sup>2+</sup> capacitor in signaling and normal plant development was reported (<xref ref-type="bibr" rid="ref66">Lamport and V&#x00E1;rnai, 2013</xref>; <xref ref-type="bibr" rid="ref67">Lamport et al., 2014</xref>, <xref ref-type="bibr" rid="ref65">2018</xref>; <xref ref-type="bibr" rid="ref79">Mizukami et al., 2016</xref>; <xref ref-type="bibr" rid="ref72">Lopez-Hernandez et al., 2020</xref>). Importantly, big differences in composition can be found between the AGP-like enriched fraction prepared with the help of IEX chromatography and AGP-like glycoproteins obtained by Yariv precipitation from <italic>U. lactuca</italic> extract, whose composition was previously published (<xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). The discrepancies are caused most probably due to the distinct content of individual AGP-like glycoproteins, or the presence of contaminating compounds based on different purifications. For instance, the IEX purified product contained more proteins other than AGP-like glycoproteins, and possibly a large fraction of them is glycosylated making the data difficult to interpret. Moreover, Yariv precipitated AGP-like glycoproteins are highly enriched in AGP-like glycoprotein with molecular weight approximately 20&#x2009;kDa compared to AGP-like enriched fraction prepared by IEX chromatography. Nevertheless, the composition of Yariv precipitated AGP-like glycoproteins still differed greatly from data known from land plant AGPs. Most importantly, the use of Yariv reagent is not suitable for large scale purification, due to the cost of Yariv reagent and mainly due to extremely low yields of the purification (<xref ref-type="bibr" rid="ref97">P&#x0159;erovsk&#x00E1; et al., 2021</xref>). Our results showed that pretreatment of <italic>B. napus</italic> plants with AGPs significantly reduced the development of <italic>L. maculans</italic> symptoms on cotyledons. To reveal the mechanism of fungus retardation induced by AGPs treatment, the direct antimicrobial activity tests of the compounds were performed in axenic cultures <italic>in vitro</italic>. Neither AGPs nor ulvan had any effect on the growth of <italic>L. maculans</italic> in this study. Unfortunately, no similar data are available for comparison. However, in the case of ulvan, various data can be found showing either no direct antifungal effect toward different pathogens (<xref ref-type="bibr" rid="ref42">Freitas and Stadnik, 2012</xref>) or even enhancing the germination of conidia of <italic>C. lindemuthianum</italic> (<xref ref-type="bibr" rid="ref94">Paulert et al., 2009</xref>). The latter corresponds to the enhanced growth of <italic>L. maculans</italic>, which can be explained in the same way. Simply, the polysaccharide can serve as a carbon source for the fungus. Nevertheless, since the compounds studied did not show any direct antifungal effect, but at the same time were able to reduce the severity of <italic>L. maculans</italic> infection at a certain concentration, it can be assumed that the protection is due to their elicitor activity. In general, elicitors trigger numerous signaling events that lead to the activation of the defense. Among the earliest is the ROS production of superoxide, hydroxyl radical and hydrogen peroxide. The latter plays a central role in biotic stress, including oxidative burst, cross-linking of cell wall proteins, callose deposition, signaling, defense gene expression, and hypersensitive response often manifested by systemic acquired resistance (<xref ref-type="bibr" rid="ref43">Freitas and Stadnik, 2015</xref>; <xref ref-type="bibr" rid="ref125">Waszczak et al., 2018</xref>). While AGPs caused a concentration-dependent production of H<sub>2</sub>O<sub>2</sub>, almost no H<sub>2</sub>O<sub>2</sub> was produced after treatment with ulvan. Similar H<sub>2</sub>O<sub>2</sub> accumulation was also found in <italic>B. napus</italic> cotyledons infiltrated with an oligosaccharide elicitor isolated from <italic>L. maculans</italic> mycelium (<xref ref-type="bibr" rid="ref61">Kim et al., 2013</xref>).</p>
<p>These results are consistent with gene expression analysis, as ROS can potentiate the production of SA and SA-mediated signaling, leading to the expression of SA-responsive defense genes such as <italic>PR1</italic>. These findings agree with the proposed mode of action of <italic>A. nodosum</italic> extract (Stella Maris&#x00AE;; <xref ref-type="bibr" rid="ref27">Cook et al., 2018</xref>). Moreover, the H<sub>2</sub>O<sub>2</sub> produced could likely have direct antimicrobial activity, as the inhibitory effect of hydrogen peroxide on conidial germination and mycelial growth of <italic>L. maculans</italic> (<xref ref-type="bibr" rid="ref57">Jind&#x0159;ichov&#x00E1; et al., 2011</xref>) has been described previously. It is noteworthy that H<sub>2</sub>O<sub>2</sub> production could be partly caused by phytotoxicity of AGPs, as necrosis formed after treatment with a high concentration (10&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup>, data not shown). However, this fact is not a problem as even low concentrations lead to a significant reduction in the severity of infection without phytotoxic effects. Phytotoxicity phenomenon has already been described for other elicitors (<xref ref-type="bibr" rid="ref19">Burketova et al., 2015</xref>; <xref ref-type="bibr" rid="ref120">Trd&#x00E1; et al., 2019</xref>). Several articles describing the effect of ulvan treatment on H<sub>2</sub>O<sub>2</sub> production showed a different response depending on the plants used and the priming of ROS production (<xref ref-type="bibr" rid="ref93">Paulert et al., 2010</xref>; <xref ref-type="bibr" rid="ref1">Aboura&#x00EF;cha et al., 2015</xref>; <xref ref-type="bibr" rid="ref43">Freitas and Stadnik, 2015</xref>). Although our results seem to contradict the findings of <xref ref-type="bibr" rid="ref43">Freitas and Stadnik (2015)</xref>, where ulvan treatment resulted in higher increase of H<sub>2</sub>O<sub>2</sub> production in <italic>A. thaliana</italic> compared to our findings, they used ulvan from <italic>Ulva fasciata</italic> and a different extraction methodology. Ulvan composition is highly dependent on the source species, ecophysiology, extraction, and processing procedure, which causes diverse bioactivity profiles (<xref ref-type="bibr" rid="ref60">Kidgell et al., 2019</xref>). In order to determine the origin of the hydrogen peroxide produced, the expression of two NADPH oxidases, also called respiratory burst oxidase homologs (RBOHs), was analyzed. <italic>RBOH D</italic> and <italic>RBOH F</italic> were chosen, since they are known to be key players in stress responses in various plant pathosystems (<xref ref-type="bibr" rid="ref119">Torres et al., 2002</xref>; <xref ref-type="bibr" rid="ref81">Morales et al., 2016</xref>; <xref ref-type="bibr" rid="ref53">Jasso-Robles et al., 2020</xref>). Both AGPs and ulvan caused a significant increase in the expression of <italic>RBOH F</italic>, but not <italic>RBOH D</italic>. Although these two enzymes cooperate during ROS generation, they are thought to play different roles in the regulation of hypersensitive response. While <italic>RBOH D</italic> is responsible for most of the ROS production during effector-triggered immunity, <italic>RBOH F</italic> is thought to control cell death (<xref ref-type="bibr" rid="ref119">Torres et al., 2002</xref>). Moreover, a different expression pattern of these two NADPH oxidases has been demonstrated, with <italic>RBOH F</italic> being mainly expressed in leaves. Nevertheless, striking differences between their functions are evident in the literature depending on the pathosystem studied and even on the inoculation method, plant growth conditions or sampling time (<xref ref-type="bibr" rid="ref81">Morales et al., 2016</xref>). Moreover, NADPH oxidases are not the only sources of hydrogen peroxide during defense responses. Polyamine oxidases and cell wall peroxidases also contribute (<xref ref-type="bibr" rid="ref59">K&#x00E1;m&#x00E1;n-T&#x00F3;th et al., 2019</xref>; <xref ref-type="bibr" rid="ref53">Jasso-Robles et al., 2020</xref>).</p>
<p>In addition to H<sub>2</sub>O<sub>2</sub> accumulation, the treatment of plants with AGPs caused changes in defense genes transcription. The results suggest that increased resistance of <italic>B. napus</italic> against <italic>L. maculans</italic> elicited by AGPs is SA-dependent as indicated by elevated transcription of both SA-biosynthetic gene <italic>ICS1</italic> and SA-responsive gene <italic>PR1</italic>. Since the expression of <italic>PAL</italic> did not differ from the control, it is probable that SA is synthesized exclusively <italic>via</italic> the pathway regulated by <italic>ICS1</italic>. In addition to the salicylic acid signaling pathway, the AGPs induced also expression of <italic>&#x03B2;CHI</italic> gene involved in JA/ET signaling. On the other hand, the activation of <italic>AOS</italic> transcription, the biosynthetic gene for jasmonic acid, by AGPs, was not observed. This resembles the signaling situation reported by <xref ref-type="bibr" rid="ref105">&#x0160;a&#x0161;ek et al. (2012b)</xref> within <italic>B. napus</italic> infection with <italic>L. maculans</italic> who showed, that the main signaling pathways involved in this pathosystem are SA and ET signaling and that the transcription of the related genes was significantly increased 7&#x2009;days after pathogen recognition. This is further supported by the strong transcription of <italic>ACS2</italic>, the ethylene-biosynthetic gene, elicited by AGPs treatment. Our findings indicate elicitation of both SA-dependent and ET-dependent signaling pathways. Nevertheless, the ever-increasing discoveries of crosstalks in between the signaling pathways revealed the truly complex nature of plant responses (<xref ref-type="bibr" rid="ref18">B&#x00FC;rger and Chory, 2019</xref>; <xref ref-type="bibr" rid="ref129">Yang et al., 2019</xref>), even in the plant <italic>B. napus</italic> (<xref ref-type="bibr" rid="ref89">Nov&#x00E1;kov&#x00E1; et al., 2014</xref>). Besides our results correspond to the results of <xref ref-type="bibr" rid="ref26">Cluzet et al. (2004)</xref>, who described the increased expression of <italic>CHI</italic>, <italic>PR1</italic>, and <italic>PR10</italic> genes after treatments with various <italic>Ulva</italic> extracts. The activation of <italic>PR1</italic> transcription was also reported in <italic>B. napus</italic> cotyledons after treatment with oligosaccharide elicitor isolated from <italic>L. maculans</italic> mycelium (<xref ref-type="bibr" rid="ref61">Kim et al., 2013</xref>) and protein elicitor isolated from <italic>L. maculans</italic> cultivation medium (<xref ref-type="bibr" rid="ref88">Nov&#x00E1;kov&#x00E1; et al., 2016</xref>). The high production of hydrogen peroxide together with a strong induction of SA and ET signaling pathways explains significant inhibitory effects of AGPs on the infection development.</p>
<p>Surprisingly, ulvan caused almost no significant changes in gene expression except for slightly increased levels of <italic>&#x03B2;CHI</italic> and <italic>VSP</italic>, consistent with its known mode of action (<xref ref-type="bibr" rid="ref55">Jaulneau et al., 2010</xref>; <xref ref-type="bibr" rid="ref49">Hern&#x00E1;ndez-Herrera et al., 2016</xref>; <xref ref-type="bibr" rid="ref99">Ramkissoon et al., 2017</xref>). Based on the results, the <italic>U. lactuca</italic> ulvan appeared to be efficient in the pathosystems studied at higher concentrations, which was further supported by an 80% decrease in <italic>L. maculans</italic> infection after treatment with a concentration of 10&#x2009;mg&#x00B7;ml<sup>&#x2212;1</sup> (<xref ref-type="supplementary-material" rid="SM1">Supplementary Figure 3</xref>). The variability in ulvan data may be due to the viscous nature of the concentrated samples, which causes uneven infiltration.</p>
<p>In addition to the major defense signaling pathways regulated by SA, JA, and ET, <italic>B. napus</italic> plants responded to elicitor treatment with a decrease in genes related to ABA. Both the <italic>NCED3</italic> biosynthetic gene and the <italic>RD26</italic> responsive gene were downregulated by both the AGPs and ulvan. This result is in accordance with previous findings of <xref ref-type="bibr" rid="ref55">Jaulneau et al. (2010)</xref>, who reported a transient decrease (2&#x2009;days after treatment) in ABA-responsive genes in <italic>Medicago truncatula</italic>. On the other hand, <xref ref-type="bibr" rid="ref25">Chen et al. (2013)</xref> found an increase in ABA in plants treated with a protein elicitor from oomycete <italic>Phytophthora boehmeriae</italic>, which lead to significant reduction of pathogen infection. These contrasting results indicate that the role of ABA in induced resistance by elicitors is not as straightforward as, e.g., the role of SA. The role of ABA in plant defense against pathogens is less defined and the data are less consistent compared with SA, JA, and ET signaling. Since ABA regulates stomata opening, it is suggested that ABA is an important phytohormone in protecting the host plant from pathogen penetration <italic>via</italic> the stomata. The possible positive role of ABA in the studied pathosystem <italic>B. napus&#x2014;L. maculans</italic> was previously reported by <xref ref-type="bibr" rid="ref105">&#x0160;a&#x0161;ek et al. (2012b)</xref>. Similar to ABA, several elicitors of different origins induced stomata closure and ROS production in guard cells (<xref ref-type="bibr" rid="ref3">All&#x00E8;gre et al., 2009</xref>).</p>
<p>In conclusion, our study makes an important contribution to the understanding of the mechanisms behind the elicitor activity of <italic>U. lactuca</italic> extracts recently introduced in agriculture. In addition to the well-described polysaccharide ulvan, <italic>U. lactuca</italic> contains other compounds that elicit even stronger defenses against pathogens. We were able to prepare an AGP-like enriched fraction that efficiently induced resistance to the hemibiotrophic fungal pathogen <italic>L. maculans</italic> in cotyledons of <italic>B. napus</italic>. Examination of the signaling events revealed that the triggered defense mechanisms were regulated by H<sub>2</sub>O<sub>2</sub>, SA, and ET signaling. Proposed mechanisms of actions for both AGPs and ulvan are presented in the <xref rid="fig6" ref-type="fig">Figure 6</xref>. Since AGPs showed higher efficiency than ulvan, AGPs may have the potential to become a component of plant protection products in the future. Moreover, for their possible future application, our following research will be focused on increased penetration of AGPs to the plants, testing oligosaccharides produced from AGPs, and assessing their effect also on other pathosystems including monocot plants, which differ in their defense signaling.</p>
<fig position="float" id="fig6">
<label>Figure 6</label>
<caption><p>Proposed mechanism of AGP-like enriched fraction (AGPs) and ulvan action based on transcription of signaling pathway marker genes. AGPs activate the salicylic acid signaling pathway <italic>via isochorismate synthase 1</italic> and the ethylene signaling pathway <italic>via ACC synthase</italic>. Ulvan activates the ethylene signaling pathway based on gene expression of <italic>&#x03B2;CHI</italic> and probably also jasmonic acid signaling pathway based on <italic>VSP</italic> expression. Full arrows indicate proven involvement of the pathways, and dashed arrows indicate likely involvement of the pathways.</p></caption>
<graphic xlink:href="fpls-13-893858-g006.tif"/>
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<sec id="sec26" sec-type="data-availability">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1"><bold>Supplementary Material</bold></xref>; further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="sec27">
<title>Author Contributions</title>
<p>TP contributed to data collection, designing research, and analyzing the data and writing the manuscript. BJ contributed to data collection, designing plant experiments, analyzing the data, and editing the manuscript. SH contributed to data collection (saccharide analysis). J-CY and VF contributed to designing research. LB contributed to designing research and editing the manuscript. PL contributed to data collection, designing research, and editing the manuscript. All authors contributed to the article and approved the submitted version.</p>
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<sec id="sec28" sec-type="funding-information">
<title>Funding</title>
<p>The work was supported from European Regional Development Fund-Project &#x201C;Centre for Experimental Plant Biology&#x201D; (no. CZ.02.1.01/0.0/0.0/16_019/0000738) and by the grant of Specific University Research (A1_FPBT_2020_001).</p>
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<sec id="conf1" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="sec31" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
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<p>The authors would like to thank the French Ministry of Foreign Affairs and the Agro Innovation International TIMAC AGRO for financial support. And also thank to Roman Bleha from Department of Carbohydrates and Cerials at the University of Chemistry and Technology Prague for his kind help with FT-IR analysis of ulvan.</p>
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<sec id="sec30" sec-type="supplementary-material">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link xlink:href="https://www.frontiersin.org/articles/10.3389/fpls.2022.893858/full#supplementary-material" ext-link-type="uri">https://www.frontiersin.org/articles/10.3389/fpls.2022.893858/full#supplementary-material</ext-link></p>
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