<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2017.00008</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Perspective</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Genetic Modification for Improving Seed Vigor Is Transitioning from Model Plants to Crop Plants</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Wu</surname> <given-names>Xiaolin</given-names></name>
<uri xlink:href="http://loop.frontiersin.org/people/267021/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Ning</surname> <given-names>Fen</given-names></name>
<uri xlink:href="http://loop.frontiersin.org/people/237577/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Hu</surname> <given-names>Xiuli</given-names></name>
<uri xlink:href="http://loop.frontiersin.org/people/190284/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Wang</surname> <given-names>Wei</given-names></name>
<xref ref-type="author-notes" rid="fn001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/188112/overview"/>
</contrib>
</contrib-group>
<aff><institution>State Key Laboratory of Wheat and Maize Crop Science, Collaborative Innovation Center of Henan Grain Crops, College of Life Sciences, Henan Agricultural University</institution> <country>Zhengzhou, China</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: <italic>Alma Balestrazzi, University of Pavia, Italy</italic></p></fn>
<fn fn-type="edited-by"><p>Reviewed by: <italic>Hao Peng, Washington State University, USA; Paola Leonetti, National Research Council, Italy</italic></p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x002A;Correspondence: <italic>Wei Wang, <email>wangwei@henau.edu.cn</email></italic></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Crop Science and Horticulture, a section of the journal Frontiers in Plant Science</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>18</day>
<month>01</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>8</volume>
<elocation-id>8</elocation-id>
<history>
<date date-type="received">
<day>28</day>
<month>07</month>
<year>2016</year>
</date>
<date date-type="accepted">
<day>03</day>
<month>01</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2017 Wu, Ning, Hu and Wang.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Wu, Ning, Hu and Wang</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Although seed vigor is a complex physiological trait controlled by quantitative trait loci, technological advances in the laboratory are being translated into applications for enhancing seed vigor in crop plants. In this article, we summarize and discuss pioneering work in the genetic modification of seed vigor, especially through the over-expression of protein <sc>L</sc>-isoaspartyl methyltransferase (PIMT, EC 2.1.1.77) in seeds. The impressive success in improving rice seed vigor through the over-expression of <italic>PIMT</italic> provides a valuable reference for engineering high-vigor seeds for crop production. In recent decades, numerous genes/proteins associated with seed vigor have been identified. It is hoped that such potential candidates may be used in the development of genetically edited crops for a high and stable yield potential in crop production. This possibility is very valuable in the context of a changing climate and increasing world population.</p>
</abstract>
<kwd-group>
<kwd><italic>Arabidopsis</italic></kwd>
<kwd>cereal crops</kwd>
<kwd>genetic modification</kwd>
<kwd>protein l-isoaspartyl methyltransferase (PIMT)</kwd>
<kwd>rice</kwd>
<kwd>reactive oxygen species (ROS)</kwd>
<kwd>seed vigor and longevity</kwd>
<kwd>transgenic seeds</kwd>
</kwd-group>
<counts>
<fig-count count="0"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="76"/>
<page-count count="7"/>
<word-count count="0"/>
</counts>
</article-meta>
</front>
<body>
<sec><title>Introduction</title>
<p>Seed vigor is a complex physiological trait that is necessary to ensure the rapid and uniform emergence of plants in the field (<xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>), essentially including the seed longevity, the tolerance of environmental stresses by germination, and the ability to withstand prolonged storage and CDT. This trait is controlled by many QTLs that are located on different chromosomes, as found in the model plant <italic>Arabidopsis</italic> (<xref ref-type="bibr" rid="B13">Clerkx et al., 2004</xref>) and in crop plants such as rice (<xref ref-type="bibr" rid="B14">Cui et al., 2002</xref>; <xref ref-type="bibr" rid="B36">Miura et al., 2002</xref>), <italic>Medicago truncatula</italic> (<xref ref-type="bibr" rid="B58">Vandecasteele et al., 2011</xref>), and maize (<xref ref-type="bibr" rid="B19">Han et al., 2014</xref>) and is also affected by environmental factors during seed development, harvest, and storage.</p>
<p>Orthodox seeds, such as cereal seeds, undergo desiccation at the end of the maturation process on the mother plant and maintain their vigor over prolonged time periods (<xref ref-type="bibr" rid="B45">Rajjou et al., 2012</xref>). Because of their desiccation tolerance during dry storage, orthodox seeds are most commonly used in agriculture. For example, only three crop species (wheat, rice, and maize) account for more than 50% of all calories consumed by of the global population (<xref ref-type="bibr" rid="B33">Macovei et al., 2012</xref>). In addition to economic and ecological importance, high-vigor seeds are necessary for seedling establishment and sustainable crop productivity, especially under unfavorable conditions (<xref ref-type="bibr" rid="B45">Rajjou et al., 2012</xref>; <xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>). High-vigor seeds can improve seed germination and seedling emergence, increase crop yield and reduce the cost of agriculture production. With the widespread application of modern mechanized precision sowing technology for grain (e.g., maize, wheat) production, high-vigor seeds have become particularly important. In addition, for seed germplasms conserved in gene banks around the world, seed vigor and longevity may affect the regeneration cycle of accessions stored in seed banks. Seeds in long-term storage, especially under high-temperature and high-moisture conditions, will eventually lose their viability (<xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>). High-vigor seeds can survive a prolonged storage time.</p>
<p>However, the seed vigor trait is often excluded from traditional breeding programs, which are mostly directed toward high yield. To increase the vigor of commercial seed lots, the seed industry practices various invigoration treatments, especially physical priming methods (review in <xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>; <xref ref-type="bibr" rid="B3">Ara&#x00FA;jo et al., 2016</xref>). In fact, the potential of GM technology for enhancing seed vigor has been proposed as the most effective, economical and sustainable approach (<xref ref-type="bibr" rid="B13">Clerkx et al., 2004</xref>; <xref ref-type="bibr" rid="B58">Vandecasteele et al., 2011</xref>; <xref ref-type="bibr" rid="B19">Han et al., 2014</xref>). In the context of classical breeding, the application of GM technology to agriculturally important crops will play an increasingly important role in solving some fundamental challenges that face agriculture, natural resources and the environment. In this article, we summarize and discuss some pioneering work in the GM of seed vigor, especially through the approach of genetic engineering the PIMT (EC 2.1.1.77) in seeds. GM for improving seed vigor is just transitioning from model plants to crop plants. Promisingly, numerous genes/proteins associated with seed vigor, identified over the decades, may be used for the creation of genetically edited crops for a high and stable yield potential in crop production. This possibility is very valuable in the context of a changing climate and increasing world population.</p>
</sec>
<sec><title>Physiological, Biochemical, and Genetic Bases of Seed Vigor</title>
<p>Seed vigor is a complex physiological trait involving regulatory networks that integrate genetic programs, metabolic signals, and hormonal signaling pathways (<xref ref-type="bibr" rid="B45">Rajjou et al., 2012</xref>). Many QTLs located on different chromosomes have documented associations with seed vigor. The various candidate genes identified within these QTLs are mainly involved in the glycolytic pathway, protein metabolism and signal transduction (<xref ref-type="bibr" rid="B14">Cui et al., 2002</xref>; <xref ref-type="bibr" rid="B36">Miura et al., 2002</xref>; <xref ref-type="bibr" rid="B58">Vandecasteele et al., 2011</xref>; <xref ref-type="bibr" rid="B19">Han et al., 2014</xref>). Seed vigor also has a close relationship with seed maturity degree, harvest time, and storage period: it has a maximum at physiological maturity and then decreases during storage (<xref ref-type="bibr" rid="B54">Sun et al., 2007</xref>). Carbohydrates, proteins, and mRNAs stored during seed development on the mother plant assist with hormone signaling pathways, especially the ABA signaling pathway, to regulate seed germination and influence seed vigor (<xref ref-type="bibr" rid="B45">Rajjou et al., 2012</xref>). ABA participates in regulating the expression of some seed genes in the mother plant during seed dehydration, such as LEA proteins, and inhibits the germination of developing seeds (<xref ref-type="bibr" rid="B67">Williams and Tsang, 1991</xref>). During storage, the seed will always deteriorate through a series of changes, such as the accumulation of ROS, lipid peroxidation, loss of cellular membrane integrity, enzyme inactivation, weak energy metabolism, and DNA degradation (<xref ref-type="bibr" rid="B24">Kibinza et al., 2006</xref>; <xref ref-type="bibr" rid="B42">Parkhey et al., 2012</xref>; <xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>; <xref ref-type="bibr" rid="B70">Xin et al., 2014</xref>; <xref ref-type="bibr" rid="B74">Yin et al., 2014</xref>; <xref ref-type="bibr" rid="B25">Kong et al., 2015</xref>; <xref ref-type="bibr" rid="B47">Ratajczak et al., 2015</xref>).</p>
<p>The loss of seed vigor is a complex normal biological phenomenon. In research on the mechanism of seed vigor change, CDT is the main way to simulate the seed aging process because aging naturally is time-consuming. Proteomics analysis displays a similar proteome characterization between artificial and natural aged <italic>Arabidopsis</italic> seed (<xref ref-type="bibr" rid="B46">Rajjou et al., 2008</xref>). However, a recent study reported substantial differences in scutellum nuclear content and morphology between the viability loss of accelerated and naturally aged wheat seed (<xref ref-type="bibr" rid="B1">Ahmed et al., 2016</xref>). Numerous studies have been performed on the process of seed deterioration in various plant species (e.g., <xref ref-type="bibr" rid="B7">Catusse et al., 2008</xref>, <xref ref-type="bibr" rid="B6">2011</xref>; <xref ref-type="bibr" rid="B17">Galpaz and Reymond, 2010</xref>; <xref ref-type="bibr" rid="B19">Han et al., 2014</xref>; <xref ref-type="bibr" rid="B40">Nagel et al., 2014</xref>). However, the underlying mechanism remains unclear. It has become increasingly accepted that ROS damage to DNA (<xref ref-type="bibr" rid="B59">Vanderauwera et al., 2011</xref>), proteins (<xref ref-type="bibr" rid="B46">Rajjou et al., 2008</xref>) and membrane lipids (<xref ref-type="bibr" rid="B49">Roqueiro et al., 2010</xref>) plays a role in seed aging. ROS are continuously generated during seed development, storage and germination and exist in a state of dynamic equilibrium in cells under the action of free radical scavenger enzymes. Thus, the accumulation of ROS could be a common mechanism in seed deterioration. As a countermeasure, seed vigor has evolved a sophisticated mechanism (protection, detoxification, and repair) to protect macromolecules from ROS damage (review in <xref ref-type="bibr" rid="B45">Rajjou et al., 2012</xref>; <xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>). The possibility of restricting ROS accumulation may be a promising step toward successfully engineering seed vigor in crops.</p>
</sec>
<sec><title>Potential Candidates of Genes/Proteins Associated with Seed Vigor Trait</title>
<p>Under natural conditions, it is very rare to acquire high-vigor seeds through natural variation. Traditional breeding has made great progress in crop improvement; however, the process is time-consuming, and the genetic resources regarding seed vigor are limited. Promisingly, with the development of global omics approaches, such as genomics, transcriptomics and proteomics, numerous potential candidates (genes/proteins) involved in seed vigor have been identified with high efficiency in recent decades (<bold>Table <xref ref-type="table" rid="T1">1</xref></bold>), though few have been detected in the identified QTLs associated with seed vigor (<xref ref-type="bibr" rid="B14">Cui et al., 2002</xref>; <xref ref-type="bibr" rid="B36">Miura et al., 2002</xref>; <xref ref-type="bibr" rid="B58">Vandecasteele et al., 2011</xref>; <xref ref-type="bibr" rid="B19">Han et al., 2014</xref>). These potential candidates may be used in breeding programs and/or in biotechnological approaches to improve seed vigor and crop yields.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Candidate proteins/genes for improving seed vigor in plants.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Plant species</th>
<th valign="top" align="left">Target proteins/genes</th>
<th valign="top" align="left">Reference</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="3">Repair proteins/genes</td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Arabidopsis thaliana</italic></td>
<td valign="top" align="left">AtLIG6, AtLIG4, AtOGG1</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B65">Waterworth et al., 2010</xref>; <xref ref-type="bibr" rid="B10">Chen et al., 2012</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Medicago truncatula</italic></td>
<td valign="top" align="left">MSR, MtOGG1, MtFPG, MtTFIIS</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B31">Macovei et al., 2011a</xref>,<xref ref-type="bibr" rid="B32">b</xref>; <xref ref-type="bibr" rid="B9">Ch&#x00E2;telain et al., 2013</xref></td>
</tr>
<tr>
<td valign="top" align="left" colspan="3">Protective proteins/genes</td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>A. thaliana</italic></td>
<td valign="top" align="left">ATEM6, PLD&#x03B1;1, LEA14, XERO1, RAB18, HSP70, HSP 20, HSP17.7</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B16">Gallardo et al., 2001</xref>; <xref ref-type="bibr" rid="B35">Manfre et al., 2006</xref>, <xref ref-type="bibr" rid="B34">2009</xref>; <xref ref-type="bibr" rid="B15">Devaiah et al., 2007</xref>; <xref ref-type="bibr" rid="B21">Hundertmark et al., 2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Oriza sativa</italic></td>
<td valign="top" align="left">OsHSP18.2</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B22">Kaur et al., 2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Triticum aestivum</italic></td>
<td valign="top" align="left">HSPs</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B20">Helm et al., 1989</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Zea mays</italic></td>
<td valign="top" align="left">HSP18, HSP 17.2, HSP 16.9, LEA-3, EMB564, <italic>PR2</italic>, <italic>Opaque2</italic>, <italic>MT1</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B48">Revilla et al., 2009</xref>; <xref ref-type="bibr" rid="B68">Wu et al., 2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Glycine max</italic></td>
<td valign="top" align="left"><italic>PLD&#x03B1;</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B26">Lee et al., 2012</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Helianthus annuus</italic></td>
<td valign="top" align="left"><italic>HaHSFA9</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B44">Prieto-Dapena et al., 2006</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Nelumbo nucifera</italic></td>
<td valign="top" align="left"><italic>NnHSP17.5</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B75">Zhou et al., 2012a</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Beta vulgaris</italic></td>
<td valign="top" align="left">HSP17, PP2A, 14-3-3, Glycine betaine</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B7">Catusse et al., 2008</xref>, <xref ref-type="bibr" rid="B6">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>M. truncatula</italic></td>
<td valign="top" align="left">HSP 18.2, HSP17.4, GroEL, RPN1, sHSP20</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B72">Yacoubi et al., 2011</xref>; <xref ref-type="bibr" rid="B8">Ch&#x00E2;telain et al., 2012</xref></td>
</tr>
<tr>
<td valign="top" align="left" colspan="3">Detoxification proteins/genes</td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>A. thaliana</italic></td>
<td valign="top" align="left">SSADH, <italic>MSD1</italic>, <italic>CAT1</italic>, <italic>HPT1</italic>, <italic>APX4</italic>, AtDLAH, RBOH-B, MST, <italic>VTE</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B4">Bouch&#x00E9; et al., 2003</xref>; <xref ref-type="bibr" rid="B50">Sattler et al., 2004</xref>; <xref ref-type="bibr" rid="B46">Rajjou et al., 2008</xref>; <xref ref-type="bibr" rid="B39">M&#x00FC;ller et al., 2009</xref>; <xref ref-type="bibr" rid="B69">Xi et al., 2010</xref>; <xref ref-type="bibr" rid="B51">Seo et al., 2011</xref>; <xref ref-type="bibr" rid="B64">Wang et al., 2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>O. sativa</italic></td>
<td valign="top" align="left">OsALDH7, ACCase, PI3K</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B52">Shin et al., 2009</xref>; <xref ref-type="bibr" rid="B56">Talai and Sen-Mandi, 2010</xref>; <xref ref-type="bibr" rid="B29">Liu et al., 2012</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Hordeum vulgare</italic></td>
<td valign="top" align="left">PER1</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B53">Stacy et al., 1999</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Z. mays</italic></td>
<td valign="top" align="left">2-Cys Prx BAS1, TPX, GST, GLO, <italic>SOD4</italic>, <italic>CAT3</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B48">Revilla et al., 2009</xref>; <xref ref-type="bibr" rid="B68">Wu et al., 2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>N. nucifera</italic></td>
<td valign="top" align="left">NnANN1, <italic>NnMT2a, NnMT2b, NnMT3</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B11">Chu et al., 2012</xref>; <xref ref-type="bibr" rid="B76">Zhou et al., 2012b</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Nicotiana tabacum</italic></td>
<td valign="top" align="left"><italic>CuZnSOD, APX</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B27">Lee et al., 2010</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>M. truncatula</italic></td>
<td valign="top" align="left">Annexin, SOD, Trx, AhpC, 1-Cys Prx, GST, Prx, MSR</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B72">Yacoubi et al., 2011</xref>, <xref ref-type="bibr" rid="B73">2013</xref>; <xref ref-type="bibr" rid="B9">Ch&#x00E2;telain et al., 2013</xref></td>
</tr>
<tr>
<td valign="top" align="left" colspan="3">Others</td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>A. thaliana</italic></td>
<td valign="top" align="left"><italic>eIFiso4F</italic>, <italic>RSL1</italic>, <italic>Gln1</italic>, <italic>Gln2</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B28">Lellis et al., 2010</xref>; <xref ref-type="bibr" rid="B5">Bueso et al., 2014</xref>; <xref ref-type="bibr" rid="B18">Guan et al., 2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>Beta vulgaris</italic></td>
<td valign="top" align="left">ICL, SAM, Cys synthase, caleosin</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B7">Catusse et al., 2008</xref>, <xref ref-type="bibr" rid="B6">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>G. max</italic></td>
<td valign="top" align="left">Tu1, Tu2, 1-a</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B62">Wang et al., 2012</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;<italic>O. sativa</italic></td>
<td valign="top" align="left"><italic>OsLOX</italic></td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B55">Suzuki and Matsukura, 1997</xref>; <xref ref-type="bibr" rid="B63">Wang et al., 2008</xref></td>
</tr>
<tr>
<td valign="top" align="left">&#x00A0;&#x00A0;&#x00A0;&#x00A0;</td>
</tr>
</tbody>
</table>
</table-wrap>
<sec><title>Repair Proteins</title>
<p>The formation of isoAsp, arising from both the deamidation of <sc>L</sc>-asparaginyl residues and the isomerization of <sc>L</sc>-aspartyl residues, is a frequent chemical modification that alters protein structure and leads to a loss of function (<xref ref-type="bibr" rid="B30">Lowenson and Clarke, 1992</xref>). The PIMT counteracts such damage by catalyzing the conversion of isoAsp to normal Asp in a variety of organisms, including plants (reviewed in <xref ref-type="bibr" rid="B12">Clarke, 2003</xref>). The PIMT-mediated protein repair mechanism represents a good example that has been successfully engineered for enhanced seed vigor (see below: case of PIMT, <bold>Table <xref ref-type="table" rid="T2">2</xref></bold>). For orthodox seeds, DNA damage, caused by ROS stress, occurs during seed dehydration and storage, leading to vigor loss. It is generally recognized that enhanced seed vigor and successful priming depend on DNA repair mechanisms activated during imbibition (<xref ref-type="bibr" rid="B60">Ventura et al., 2012</xref>). In <italic>Arabidopsis</italic>, the plant-specific DNA ligase VI (AtLIG6 and AtLIG4) is an important determinant of seed vigor and longevity under adverse germination conditions; <italic>atlig6</italic> and <italic>atlig6::atlig4</italic> mutants show significant hypersensitivity to CDT, displaying delayed germination and reduced seed vigor (<xref ref-type="bibr" rid="B65">Waterworth et al., 2010</xref>). A bifunctional DNA glycosylase/apurinic/apyrimidinic lyase, AtOGG1, is involved in base excision repair for eliminating 8-oxo-G from DNA, and the over-expression of <italic>AtOGG1</italic> enhances seed longevity and abiotic stress tolerance (<xref ref-type="bibr" rid="B10">Chen et al., 2012</xref>). These DNA repair pathways represent potential targets for the generation of crops with improved seed vigor traits.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Physiological consequences of altering PIMT accumulation in plant seeds.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Plant species</th>
<th valign="top" align="left">Methodology</th>
<th valign="top" align="left">Main findings and altered seed traits</th>
<th valign="top" align="left">Reference</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>A. thaliana</italic></td>
<td valign="top" align="left">T-DNA insertion line with increased <italic>PIMT1</italic> expression and transgenic lines with altered <italic>PIMT1</italic> expression</td>
<td valign="top" align="left">The physiological role of <italic>AtPIMT1</italic> in seed vigor and longevity has been established in <italic>Arabidopsis</italic>.</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B41">Og&#x00E9; et al., 2008</xref></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left">The higher PIMT1 amount in <italic>pimt1-1</italic> seeds correlates with lower isoAsp accumulation <italic>in vivo</italic> and increases both seed longevity and germination vigor, and <italic>vice versa</italic>.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left">Germination % after 8 days storage (40&#x00B0;C, 15&#x2013;20% humidity): 52 and 25% for WT seeds; 80 and 50% for the <italic>pimt1-1</italic> mutant seeds, monitored at 4 days after sowing.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Cicer arietinum</italic></td>
<td valign="top" align="left">Seed-specific Over-expression of <italic>CaPIMT1</italic> and <italic>CaPIMT2</italic> in <italic>Arabidopsis</italic></td>
<td valign="top" align="left">The role of <italic>CaPIMT2</italic> in seed vigor and longevity has been elucidated.</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B61">Verma et al., 2013</xref></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left"><italic>CaPIMT2</italic> enhances seed vigor and longevity by repairing abnormal isoAsp in the seed nuclear proteome.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left">Germination % after 4 days of CDT, control seeds, 10&#x2013;14%; <italic>CaPIMT1</italic> and <italic>CaPIMT2</italic> transformed seeds, 80&#x2013;90%.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"><italic>O. sativa</italic></td>
<td valign="top" align="left">Overexpressing <italic>OsPIMT1</italic> lines and <italic>OsPIMT1</italic> RNAi lines</td>
<td valign="top" align="left">The role of <italic>OsPIMT1</italic> in seed vigor and longevity has been elucidated.</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B66">Wei et al., 2015</xref></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left">Germination % after 21 days of CDT, overexpressing <italic>OsPIMT1</italic> transgenic seeds, increased 9&#x2013;15%; <italic>OsPIMT1</italic> RNAi lines, rapid loss of germination.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left">Transgenic rice and <italic>Arabidopsis</italic> lines with altered expression of <italic>OsPIMT1</italic> and <italic>OsPIMT2</italic></td>
<td valign="top" align="left">The PIMT-mediated protein repair mechanism during seed development and aging in rice has been elucidated, i.e., OsPIMTs repairs antioxidative enzymes and proteins that restrict ROS accumulation, lipid peroxidation, and so on, thus contributing to seed vigor and longevity.</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B43">Petla et al., 2016</xref></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left">Transgenic rice overexpressing <italic>OsPIMT1</italic> and <italic>OsPIMT2</italic> exhibits improved seed vigor and longevity.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"></td>
<td valign="top" align="left">Germination % after 4 days of CDT, control seeds, 8% (maximum); <italic>OsPIMT1</italic>, <italic>OsPIMT2</italic>, and <italic>&#x0394;OsPIMT2</italic> transformed seeds, 43&#x2013;48%.</td>
<td valign="top" align="left"></td>
</tr>
<tr>
<td valign="top" align="left"></td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec><title>Protective Proteins</title>
<p>Protective molecules such as LEA proteins and HSPs are generally associated with desiccation tolerance and longevity and are accumulated in the maturation phase during seed development. These stress-related proteins may also play a role in seed vigor.</p>
<p>Transgenic <italic>Arabidopsis</italic> seeds over-accumulating a HSF exhibit enhanced accumulation of HSPs and improved tolerance to aging (<xref ref-type="bibr" rid="B44">Prieto-Dapena et al., 2006</xref>). Knockout mutation in <italic>ATEM6</italic> of the <italic>Arabidopsis</italic> group 1 LEA family resulted in a premature phenotype, demonstrating that ATEM6 protein is associated with water retention/loss during seed maturation; however, it might not be required in mature seeds for viability or efficient germination (<xref ref-type="bibr" rid="B35">Manfre et al., 2006</xref>, <xref ref-type="bibr" rid="B34">2009</xref>). Dehydrins are LEA proteins that accumulate during seed maturation and in response to abiotic stresses in vegetative tissues. A twofold reduction in seed-specific dehydrin (LEA14, XERO1, and RAB18) by RNAi reduced seed longevity and viability in <italic>Arabidopsis</italic> (<xref ref-type="bibr" rid="B21">Hundertmark et al., 2011</xref>). Phospholipase D, which cleaves phospholipids and generates phosphatidic acid (PA), is involved in the early stages of seed deterioration. The accumulation of PA in seeds triggers damage at the level of cellular membranes and storage lipids. Depletion of the <italic>Arabidopsis</italic> PLD&#x03B1;1 gene, encoding a member of the lipid-hydrolyzing phospholipase D family, resulted in seeds with lower levels of lipid peroxides and increased tolerance to aging (<xref ref-type="bibr" rid="B15">Devaiah et al., 2007</xref>).</p>
</sec>
<sec><title>Detoxification Proteins</title>
<p>This class of proteins performs the degradation and/or elimination of endogenous and exogenous toxins, such as ROS. In particular, to eliminate ROS, cells develop a number of ROS scavengers such as superoxide dismutase, peroxidase, and vitamins. Enhanced seed longevity has been reported through the elimination of ROS by over-accumulated ROS scavengers in transgenic seeds (e.g., <xref ref-type="bibr" rid="B27">Lee et al., 2010</xref>).</p>
<p>Three genes (<italic>NnMT2a</italic>, <italic>NnMT2b</italic>, and <italic>NnMT3</italic>) from sacred lotus that encode metallothioneins, cysteine-rich small proteins involved in ROS scavenging, were highly expressed in germinating sacred lotus seeds and dramatically upregulated in response to high salinity and oxidative stresses (<xref ref-type="bibr" rid="B76">Zhou et al., 2012b</xref>). Moreover, transgenic <italic>Arabidopsis</italic> seeds overexpressing <italic>NnMT2a</italic> and <italic>NnMT3</italic> displayed a remarkably improved resistance to accelerated aging treatment, indicating their significant roles in seed germination vigor (<xref ref-type="bibr" rid="B76">Zhou et al., 2012b</xref>).</p>
<p>The mitochondrial SSADH is one of the three enzymes involved in the GABA shunt. In plants, the role of the GABA shunt in protection against oxidative stress has been demonstrated (<xref ref-type="bibr" rid="B4">Bouch&#x00E9; et al., 2003</xref>). The presence of SSADH in dry seeds suggests that the GABA shunt is involved in the control of seed longevity or/and germination. Mutations in the OsALDH7 gene resulted in seeds that were more sensitive to artificial aging conditions and accumulated more malondialdehyde than wild-type seeds, implying that this enzyme plays a role in maintaining seed viability by detoxifying the aldehydes generated by lipid peroxidation (<xref ref-type="bibr" rid="B52">Shin et al., 2009</xref>).</p>
</sec>
</sec>
<sec><title>Genetic Modified Seeds for Enhanced Vigor: Case of PIMT</title>
<p>In seeds, proteins are prone to aging damage during normal aging and CDT. To date, a successful approach to enhanced seed vigor involves enhancing the accumulation of PIMT in seeds. However, no specific proteins have been assigned to the identified QTLs associated with seed vigor. The history of this effort provides an excellent example of how scientific problem solving can be brought to bear on applications in agriculture.</p>
<p><xref ref-type="bibr" rid="B37">Mudgett and Clarke (1993</xref>, <xref ref-type="bibr" rid="B38">1994</xref>) first discovered PIMT activity in plants and proposed that PIMT might be involved in seed survival by preventing isoAsp accumulation in the proteins of aging and stressed seeds. PIMT has since been detected in a wide range of plants and cloned in <italic>Arabidopsis</italic>, wheat, chickpea and rice, and the numbers are still increasing. In plants, PIMT is encoded by two different genes (<italic>PIMT1</italic> and <italic>PIMT2</italic>) (<xref ref-type="bibr" rid="B71">Xu et al., 2004</xref>), which display distinct expression patterns but similar biochemical properties (<xref ref-type="bibr" rid="B57">Thapar et al., 2001</xref>). Later, <xref ref-type="bibr" rid="B41">Og&#x00E9; et al. (2008)</xref> validated the role of this enzyme in both seed vigor and longevity by altering the expression of PIMT1 in <italic>Arabidopsis</italic>. Their findings implicate PIMT1 as a major endogenous factor that limits isoAsp accumulation in seed proteins, thereby improving seed traits such as longevity and vigor. Recently, the role of PIMT in seed vigor and longevity has been evaluated in chickpea (<italic>Cicer arietinum</italic>) (<xref ref-type="bibr" rid="B61">Verma et al., 2013</xref>) and rice (<italic>Oriza sativa</italic>) (<xref ref-type="bibr" rid="B66">Wei et al., 2015</xref>; <xref ref-type="bibr" rid="B43">Petla et al., 2016</xref>). Notably, transgenic rice constitutively overexpressing <italic>OsPIMT1</italic> and <italic>OsPIMT2</italic> exhibited improved seed vigor and longevity (<xref ref-type="bibr" rid="B43">Petla et al., 2016</xref>).</p>
<p>Although the seed vigor trait depends on a wide range of physical, chemical, molecular and QTLs, the PIMT repair pathway improves seed vigor in rice by restricting the formation of deleterious isoAsp and repairing damaged proteins, not through direct DNA or lipid protection (<xref ref-type="bibr" rid="B43">Petla et al., 2016</xref>). This finding implies the efficacy of making high-vigor rice seeds through a target-gene approach. However, it remains to be observed whether this approach can work in the field or whether other single-gene manipulations can also produce such effects. Moreover, the effect of enhanced PIMT expression on other seed traits, e.g., nutrient value, potential health risk as food and feed, and plant phenotypes, must be extensively evaluated. In addition, the exploitation of such PIMT-mediated improvement of seed vigor in other important crops could have a huge impact on the agricultural economy. The successful case of over-expressed PIMT enhancing seed vigor proves a good guide for other potential candidates.</p>
</sec>
<sec><title>Concluding Remarks and Perspective</title>
<p>Currently, achieving food supply security with limited arable land is a major global challenge due to the changing climate and increasing global population. The approach of modifying PIMT in seed tissues provides a rational means of creating high-vigor seeds for crop production. Its application to important cereals such as wheat, rice, and maize may have a dramatic impact on global food security. Despite substantial progress, many questions still remain. The possible effect of enhanced seed vigor obtained by the over-expression of PIMT and other proteins on the nutritional value of crops is unclear. It remains to be assessed whether a GM seed with enhanced vigor shares similar health and nutritional characteristics with its conventional counterpart.</p>
<p>While numerous potential candidates (genes/proteins) associated with seed vigor are available, their roles in improving seed vigor must be validated by reverse genetics on large-scale samples before translation into application in agriculturally relevant crop species. The rapid development of new genome-editing techniques enables the precise modulation of traits of interest with unprecedented control and efficiency. Among the current genome-editing tools, CRISPR is easy, rapid and inexpensive, exhibiting a broad applicability of plant genome editing for the development of designer crops (review in <xref ref-type="bibr" rid="B23">Khatodia et al., 2016</xref>). However, it is important to remember that the safe use of GM food or feed requires an assessment of health risks and environmental effect (<xref ref-type="bibr" rid="B2">Araki and Ishii, 2015</xref>).</p>
<p>At present, there are no reports on the application of CRISPR in manipulating seed vigor in plants. Genome-editing techniques represent a promising tool for manipulating the accumulation of proteins associated with seed vigor in a seed-specific manner and should greatly reduce the time needed to obtain valuable crop varieties. Thus, the creation of such transgenic seeds and their subsequent application in agriculture is crucial for better feeding a rapidly growing population in a changing climate.</p>
<p>Seed quality is the basis of agricultural production. High-quality seeds are an unremitting pursuit for every seed producer. GM technology is an effective, economical and sustainable way to improve seed vigor, change seed color or shape, or boost nutrient components and other agronomic traits for crops. The application of GM technology will sharply change the face of agriculture.</p>
</sec>
<sec><title>Author Contributions</title>
<p>WW and XH conceived the article. FN and XW collected references and analyzed the data. XW, FN, and WW revised the manuscript. All authors contributed in manuscript writing, and approved the final manuscript.</p>
</sec>
<sec><title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> The National Natural Science Foundation of China (31371543 to WW); the Program for Innovative Research Team (in Science and Technology) in University of Henan Province (15IRTSTHN015 to WW).</p>
</fn>
</fn-group>
<ref-list>
<title>References</title>
<ref id="B1"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ahmed</surname> <given-names>Z.</given-names></name> <name><surname>Yang</surname> <given-names>H.</given-names></name> <name><surname>Fu</surname> <given-names>Y.</given-names></name></person-group> (<year>2016</year>). <article-title>The associative changes in scutellum nuclear content and morphology with viability loss of naturally aged and accelerated aging wheat (<italic>Triticum aestivum</italic>) seeds.</article-title> <source><italic>Front. Plant Sci.</italic></source> <volume>7</volume>:<issue>1474</issue>. <pub-id pub-id-type="doi">10.3389/fpls.2016.01474</pub-id></citation></ref>
<ref id="B2"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Araki</surname> <given-names>M.</given-names></name> <name><surname>Ishii</surname> <given-names>T.</given-names></name></person-group> (<year>2015</year>). <article-title>Towards social acceptance of plant breeding by genome editing.</article-title> <source><italic>Trends Plant Sci.</italic></source> <volume>20</volume> <fpage>145</fpage>&#x2013;<lpage>149</lpage>. <pub-id pub-id-type="doi">10.1016/j.tplants.2015.01.010</pub-id></citation></ref>
<ref id="B3"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ara&#x00FA;jo</surname> <given-names>S. S.</given-names></name> <name><surname>Paparella</surname> <given-names>S.</given-names></name> <name><surname>Dondi</surname> <given-names>D.</given-names></name> <name><surname>Bentivoglio</surname> <given-names>A.</given-names></name> <name><surname>Carbonera</surname> <given-names>D.</given-names></name> <name><surname>Balestrazzi</surname> <given-names>A.</given-names></name></person-group> (<year>2016</year>). <article-title>Physical methods for seed invigoration: advantages and challenges in seed technology.</article-title> <source><italic>Front. Plant Sci.</italic></source> <volume>7</volume>:<issue>646</issue>. <pub-id pub-id-type="doi">10.3389/fpls.2016.00646</pub-id></citation></ref>
<ref id="B4"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bouch&#x00E9;</surname> <given-names>N.</given-names></name> <name><surname>Fait</surname> <given-names>A.</given-names></name> <name><surname>Bouchez</surname> <given-names>D.</given-names></name> <name><surname>Moller</surname> <given-names>S. G.</given-names></name> <name><surname>Fromm</surname> <given-names>H.</given-names></name></person-group> (<year>2003</year>). <article-title>Mitochondrial succinic-semialdehyde dehydrogenase of the gamma-aminobutyrate shunt is required to restrict levels of reactive oxygen intermediates in plants.</article-title> <source><italic>Proc. Natl. Acad. Sci. U.S.A.</italic></source> <volume>100</volume> <fpage>6843</fpage>&#x2013;<lpage>6848</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1037532100</pub-id></citation></ref>
<ref id="B5"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bueso</surname> <given-names>E.</given-names></name> <name><surname>Iba&#x00F1;ez</surname> <given-names>C.</given-names></name> <name><surname>Sayas</surname> <given-names>E.</given-names></name> <name><surname>Mu&#x00F1;oz-Bertomeu</surname> <given-names>J.</given-names></name> <name><surname>Gonzalez-Guzm&#x00E1;n</surname> <given-names>M.</given-names></name> <name><surname>Rodriguez</surname> <given-names>P. L.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>A forward genetic approach in <italic>Arabidopsis thaliana</italic> identifies a RING-type ubiquitin ligase as a novel determinant of seed longevity.</article-title> <source><italic>Plant Sci.</italic></source> <volume>21</volume> <fpage>110</fpage>&#x2013;<lpage>116</lpage>. <pub-id pub-id-type="doi">10.1016/j.plantsci.2013.11.004</pub-id></citation></ref>
<ref id="B6"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Catusse</surname> <given-names>J.</given-names></name> <name><surname>Meinhard</surname> <given-names>J.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name> <name><surname>Strub</surname> <given-names>J. M.</given-names></name> <name><surname>Fischer</surname> <given-names>U.</given-names></name> <name><surname>Pestsova</surname> <given-names>E.</given-names></name><etal/></person-group> (<year>2011</year>). <article-title>Proteomics reveals potential biomarkers of seed vigor in sugarbeet.</article-title> <source><italic>Proteomics</italic></source> <volume>11</volume> <fpage>1569</fpage>&#x2013;<lpage>1580</lpage>. <pub-id pub-id-type="doi">10.1002/pmic.201000586</pub-id></citation></ref>
<ref id="B7"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Catusse</surname> <given-names>J.</given-names></name> <name><surname>Strub</surname> <given-names>J. M.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name> <name><surname>Van Dorsselaer</surname> <given-names>A.</given-names></name> <name><surname>Job</surname> <given-names>D.</given-names></name></person-group> (<year>2008</year>). <article-title>Proteome-wide characterization of sugarbeet seed vigor and its tissue specific expression.</article-title> <source><italic>Proc. Natl. Acad. Sci. U.S.A.</italic></source> <volume>105</volume> <fpage>10262</fpage>&#x2013;<lpage>10267</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.0800585105</pub-id></citation></ref>
<ref id="B8"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ch&#x00E2;telain</surname> <given-names>E.</given-names></name> <name><surname>Hundertmark</surname> <given-names>M.</given-names></name> <name><surname>Leprince</surname> <given-names>O.</given-names></name> <name><surname>Le Gall</surname> <given-names>S.</given-names></name> <name><surname>Satour</surname> <given-names>P.</given-names></name> <name><surname>Deligny-Penninck</surname> <given-names>S.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>Temporal profiling of the heat-stable proteome during late maturation of <italic>Medicago truncatula</italic> seeds identifies a restricted subset of late embryogenesis abundant proteins associated with longevity.</article-title> <source><italic>Plant Cell Environ.</italic></source> <volume>35</volume> <fpage>1440</fpage>&#x2013;<lpage>1455</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-3040.2012.02501.x</pub-id></citation></ref>
<ref id="B9"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ch&#x00E2;telain</surname> <given-names>E.</given-names></name> <name><surname>Satour</surname> <given-names>P.</given-names></name> <name><surname>Laugier</surname> <given-names>E.</given-names></name> <name><surname>Ly Vu</surname> <given-names>B.</given-names></name> <name><surname>Payet</surname> <given-names>N.</given-names></name> <name><surname>Rey</surname> <given-names>P.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Evidence for participation of the methionine sulfoxide reductase repair system in plant seed longevity.</article-title> <source><italic>Proc. Natl. Acad. Sci. U.S.A.</italic></source> <volume>110</volume> <fpage>3633</fpage>&#x2013;<lpage>3638</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1220589110</pub-id></citation></ref>
<ref id="B10"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>H.</given-names></name> <name><surname>Chu</surname> <given-names>P.</given-names></name> <name><surname>Zhou</surname> <given-names>Y.</given-names></name> <name><surname>Li</surname> <given-names>Y.</given-names></name> <name><surname>Liu</surname> <given-names>J.</given-names></name> <name><surname>Ding</surname> <given-names>Y.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>Overexpression of AtOGG1, a DNA glycosylase/AP lyase, enhances seed longevity and abiotic stress tolerance in <italic>Arabidopsis</italic>.</article-title> <source><italic>J. Exp. Bot.</italic></source> <volume>63</volume> <fpage>4107</fpage>&#x2013;<lpage>4121</lpage>. <pub-id pub-id-type="doi">10.1093/jxb/ers093</pub-id></citation></ref>
<ref id="B11"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chu</surname> <given-names>P.</given-names></name> <name><surname>Chen</surname> <given-names>H.</given-names></name> <name><surname>Zhou</surname> <given-names>Y.</given-names></name> <name><surname>Li</surname> <given-names>Y.</given-names></name> <name><surname>Ding</surname> <given-names>Y.</given-names></name> <name><surname>Jiang</surname> <given-names>L.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>Proteomic and functional analyses of <italic>Nelumbo nucifera</italic> annexins involved in seed thermotolerance and germination vigor.</article-title> <source><italic>Planta</italic></source> <volume>235</volume> <fpage>1271</fpage>&#x2013;<lpage>1288</lpage>. <pub-id pub-id-type="doi">10.1007/s00425-011-1573-y</pub-id></citation></ref>
<ref id="B12"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Clarke</surname> <given-names>S.</given-names></name></person-group> (<year>2003</year>). <article-title>Aging as war between chemical and biochemical processes: protein methylation and the recognition of age-damaged proteins for repair.</article-title> <source><italic>Ageing Res. Rev.</italic></source> <volume>2</volume> <fpage>263</fpage>&#x2013;<lpage>285</lpage>. <pub-id pub-id-type="doi">10.1016/S1568-1637(03)00011-4</pub-id></citation></ref>
<ref id="B13"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Clerkx</surname> <given-names>E. J. M.</given-names></name> <name><surname>El-Lithy</surname> <given-names>M. E.</given-names></name> <name><surname>Vierling</surname> <given-names>E.</given-names></name> <name><surname>Ruys</surname> <given-names>G. J.</given-names></name> <name><surname>Blankestijn-De Vries</surname> <given-names>H.</given-names></name> <name><surname>Groot</surname> <given-names>S. P. C.</given-names></name><etal/></person-group> (<year>2004</year>). <article-title>Analysis of natural allelic variation of <italic>Arabidopsis</italic> seed germination and seed longevity traits between the accessions Landsberg erecta and Shakdara, using a new recombinant inbred line population.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>135</volume> <fpage>432</fpage>&#x2013;<lpage>443</lpage>. <pub-id pub-id-type="doi">10.1104/pp.103.036814</pub-id></citation></ref>
<ref id="B14"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cui</surname> <given-names>K. H.</given-names></name> <name><surname>Peng</surname> <given-names>S. B.</given-names></name> <name><surname>Xing</surname> <given-names>Y. Z.</given-names></name> <name><surname>Xu</surname> <given-names>C. G.</given-names></name> <name><surname>Yu</surname> <given-names>S. B.</given-names></name> <name><surname>Zhang</surname> <given-names>Q.</given-names></name></person-group> (<year>2002</year>). <article-title>Molecular dissection of seedling-vigour and associated physiological traits in rice.</article-title> <source><italic>Theor. Appl. Genet.</italic></source> <volume>105</volume> <fpage>745</fpage>&#x2013;<lpage>753</lpage>. <pub-id pub-id-type="doi">10.1007/s00122-002-0908-2</pub-id></citation></ref>
<ref id="B15"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Devaiah</surname> <given-names>S. P.</given-names></name> <name><surname>Pan</surname> <given-names>X.</given-names></name> <name><surname>Hong</surname> <given-names>Y.</given-names></name> <name><surname>Roth</surname> <given-names>M.</given-names></name> <name><surname>Welti</surname> <given-names>R.</given-names></name> <name><surname>Wang</surname> <given-names>X.</given-names></name></person-group> (<year>2007</year>). <article-title>Enhancing seed quality and viability by suppressing phospholipase D in <italic>Arabidopsis</italic>.</article-title> <source><italic>Plant J.</italic></source> <volume>50</volume> <fpage>950</fpage>&#x2013;<lpage>957</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-313X.2007.03103.x</pub-id></citation></ref>
<ref id="B16"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gallardo</surname> <given-names>K.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name> <name><surname>Groot</surname> <given-names>S. P. C.</given-names></name> <name><surname>Puype</surname> <given-names>M.</given-names></name> <name><surname>Demol</surname> <given-names>H.</given-names></name> <name><surname>Vandekerckhove</surname> <given-names>J.</given-names></name><etal/></person-group> (<year>2001</year>). <article-title>Proteomic analysis of <italic>Arabidopsis</italic> seed germination and priming.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>126</volume> <fpage>835</fpage>&#x2013;<lpage>848</lpage>. <pub-id pub-id-type="doi">10.1104/pp.126.2.835</pub-id></citation></ref>
<ref id="B17"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Galpaz</surname> <given-names>N.</given-names></name> <name><surname>Reymond</surname> <given-names>M.</given-names></name></person-group> (<year>2010</year>). <article-title>Natural variation in <italic>Arabidopsis thaliana</italic> revealed a genetic network controlling germination under salt stress.</article-title> <source><italic>PLoS ONE</italic></source> <volume>5</volume>:<issue>e15198</issue>. <pub-id pub-id-type="doi">10.1371/journal.pone.0015198</pub-id></citation></ref>
<ref id="B18"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Guan</surname> <given-names>M.</given-names></name> <name><surname>M&#x00F8;ller</surname> <given-names>I. S.</given-names></name> <name><surname>Schjoerring</surname> <given-names>J. K.</given-names></name></person-group> (<year>2015</year>). <article-title>Two cytosolic glutamine synthetase isoforms play specific roles for seed germination and seed yield structure in <italic>Arabidopsis</italic>.</article-title> <source><italic>J. Exp. Bot.</italic></source> <volume>66</volume> <fpage>203</fpage>&#x2013;<lpage>212</lpage>. <pub-id pub-id-type="doi">10.1093/jxb/eru411</pub-id></citation></ref>
<ref id="B19"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Han</surname> <given-names>Z.</given-names></name> <name><surname>Ku</surname> <given-names>L.</given-names></name> <name><surname>Zhang</surname> <given-names>Z.</given-names></name> <name><surname>Zhang</surname> <given-names>J.</given-names></name> <name><surname>Guo</surname> <given-names>S.</given-names></name> <name><surname>Liu</surname> <given-names>H.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>QTLs for seed vigor-related traits identified in maize seeds germinated under artificial aging conditions.</article-title> <source><italic>PLoS ONE</italic></source> <volume>9</volume>:<issue>e92535</issue>. <pub-id pub-id-type="doi">10.1371/journal.pone.0092535</pub-id></citation></ref>
<ref id="B20"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Helm</surname> <given-names>K. W.</given-names></name> <name><surname>Petersen</surname> <given-names>N. S.</given-names></name> <name><surname>Abernethy</surname> <given-names>R. H.</given-names></name></person-group> (<year>1989</year>). <article-title>Heat shock response of germinating embryos of wheat: effects of imbibition time and seed vigor.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>90</volume> <fpage>598</fpage>&#x2013;<lpage>605</lpage>. <pub-id pub-id-type="doi">10.1104/pp.90.2.598</pub-id></citation></ref>
<ref id="B21"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hundertmark</surname> <given-names>M.</given-names></name> <name><surname>Buitink</surname> <given-names>J.</given-names></name> <name><surname>Leprince</surname> <given-names>O.</given-names></name> <name><surname>Hincha</surname> <given-names>D. K.</given-names></name></person-group> (<year>2011</year>). <article-title>The reduction of seed-specific dehydrins reduces seed longevity in <italic>Arabidopsis thaliana</italic>.</article-title> <source><italic>Seed Sci. Res.</italic></source> <volume>21</volume> <fpage>165</fpage>&#x2013;<lpage>173</lpage>. <pub-id pub-id-type="doi">10.1017/S0960258511000079</pub-id></citation></ref>
<ref id="B22"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kaur</surname> <given-names>H.</given-names></name> <name><surname>Petla</surname> <given-names>B. P.</given-names></name> <name><surname>Kamble</surname> <given-names>N. U.</given-names></name> <name><surname>Singh</surname> <given-names>A.</given-names></name> <name><surname>Rao</surname> <given-names>V.</given-names></name> <name><surname>Salvi</surname> <given-names>P.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Differentially expressed seed aging responsive heat shock protein OsHSP18.2 implicates in seed vigor, longevity and improves germination and seedling establishment under abiotic stress.</article-title> <source><italic>Front. Plant Sci.</italic></source> <volume>6</volume>:<issue>713</issue>. <pub-id pub-id-type="doi">10.3389/fpls.2015.00713</pub-id></citation></ref>
<ref id="B23"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khatodia</surname> <given-names>S.</given-names></name> <name><surname>Bhatotia</surname> <given-names>K.</given-names></name> <name><surname>Passricha</surname> <given-names>N.</given-names></name> <name><surname>Khurana</surname> <given-names>S. M. P.</given-names></name> <name><surname>Tuteja</surname> <given-names>N.</given-names></name></person-group> (<year>2016</year>). <article-title>The CRISPR/Cas genome-editing tool: application in improvement of crops.</article-title> <source><italic>Front. Plant Sci.</italic></source> <volume>7</volume>:<issue>506</issue>. <pub-id pub-id-type="doi">10.3389/fpls.2016.00506</pub-id></citation></ref>
<ref id="B24"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kibinza</surname> <given-names>S.</given-names></name> <name><surname>Vinel</surname> <given-names>D.</given-names></name> <name><surname>C&#x00F4;me</surname> <given-names>D.</given-names></name> <name><surname>Bailly</surname> <given-names>C.</given-names></name> <name><surname>Corbineau</surname> <given-names>F.</given-names></name></person-group> (<year>2006</year>). <article-title>Sunflower seed deterioration as related to moisture content during ageing, energy metabolism and active oxygen species scavenging.</article-title> <source><italic>Physiol. Plant.</italic></source> <volume>128</volume> <fpage>496</fpage>&#x2013;<lpage>506</lpage>. <pub-id pub-id-type="doi">10.1111/j.1399-3054.2006.00771.x</pub-id></citation></ref>
<ref id="B25"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kong</surname> <given-names>L.</given-names></name> <name><surname>Huo</surname> <given-names>H.</given-names></name> <name><surname>Mao</surname> <given-names>P.</given-names></name></person-group> (<year>2015</year>). <article-title>Antioxidant response and related gene expression in aged oat seed.</article-title> <source><italic>Front. Plant Sci.</italic></source> <volume>6</volume>:<issue>158</issue>. <pub-id pub-id-type="doi">10.3389/fpls.2015.00158</pub-id></citation></ref>
<ref id="B26"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lee</surname> <given-names>J.</given-names></name> <name><surname>Welti</surname> <given-names>R.</given-names></name> <name><surname>Roth</surname> <given-names>M.</given-names></name> <name><surname>Schapaugh</surname> <given-names>W. T.</given-names></name> <name><surname>Li</surname> <given-names>J.</given-names></name> <name><surname>Trick</surname> <given-names>H. N.</given-names></name></person-group> (<year>2012</year>). <article-title>Enhanced seed viability and lipid compositional changes during natural ageing by suppressing phospholipase D&#x03B1; in soybean seed.</article-title> <source><italic>Plant Biotechnol. J.</italic></source> <volume>10</volume> <fpage>164</fpage>&#x2013;<lpage>173</lpage>. <pub-id pub-id-type="doi">10.1111/j.1467-7652.2011.00650.x</pub-id></citation></ref>
<ref id="B27"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lee</surname> <given-names>Y. P.</given-names></name> <name><surname>Baek</surname> <given-names>K. H.</given-names></name> <name><surname>Lee</surname> <given-names>H. S.</given-names></name> <name><surname>Kwak</surname> <given-names>S. S.</given-names></name> <name><surname>Bang</surname> <given-names>J. W.</given-names></name> <name><surname>Kwon</surname> <given-names>S. Y.</given-names></name></person-group> (<year>2010</year>). <article-title>Tobacco seeds simultaneously over-expressing Cu/Zn-superoxide dismutase and ascorbate peroxidase display enhanced seed longevity and germination rates under stress conditions.</article-title> <source><italic>J. Exp. Bot.</italic></source> <volume>61</volume> <fpage>2499</fpage>&#x2013;<lpage>2506</lpage>. <pub-id pub-id-type="doi">10.1093/jxb/erq085</pub-id></citation></ref>
<ref id="B28"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lellis</surname> <given-names>A. D.</given-names></name> <name><surname>Allen</surname> <given-names>M. L.</given-names></name> <name><surname>Aertker</surname> <given-names>A. W.</given-names></name> <name><surname>Tran</surname> <given-names>J. K.</given-names></name> <name><surname>Hillis</surname> <given-names>D. M.</given-names></name> <name><surname>Harbin</surname> <given-names>C. R.</given-names></name><etal/></person-group> (<year>2010</year>). <article-title>Deletion of the eIFiso4G subunit of the <italic>Arabidopsis</italic> eIFiso4F translation initiation complex impairs health and viability.</article-title> <source><italic>Plant Mol. Biol.</italic></source> <volume>74</volume> <fpage>249</fpage>&#x2013;<lpage>263</lpage>. <pub-id pub-id-type="doi">10.1007/s11103-010-9670-z</pub-id></citation></ref>
<ref id="B29"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>J.</given-names></name> <name><surname>Zhou</surname> <given-names>J.</given-names></name> <name><surname>Xing</surname> <given-names>D.</given-names></name></person-group> (<year>2012</year>). <article-title>Phosphatidylinositol 3-kinase plays a vital role in regulation of rice seed vigor via altering NADPH oxidase activity.</article-title> <source><italic>PLoS ONE</italic></source> <volume>7</volume>:<issue>e33817</issue>. <pub-id pub-id-type="doi">10.1371/journal.pone.0033817</pub-id></citation></ref>
<ref id="B30"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lowenson</surname> <given-names>J. D.</given-names></name> <name><surname>Clarke</surname> <given-names>S.</given-names></name></person-group> (<year>1992</year>). <article-title>Recognition of D-aspartyl residues in polypeptides by the erythrocyte L-isoaspartyl/D-aspartyl protein methyltransferase. Implications for the repair hypothesis.</article-title> <source><italic>J. Biol. Chem.</italic></source> <volume>267</volume> <fpage>5985</fpage>&#x2013;<lpage>5995</lpage>.</citation></ref>
<ref id="B31"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Macovei</surname> <given-names>A.</given-names></name> <name><surname>Balestrazzi</surname> <given-names>A.</given-names></name> <name><surname>Confalonieri</surname> <given-names>M.</given-names></name> <name><surname>Buttafava</surname> <given-names>A.</given-names></name> <name><surname>Carbonera</surname> <given-names>D.</given-names></name></person-group> (<year>2011a</year>). <article-title>The TFIIS and TFIIS-like genes from <italic>Medicago truncatula</italic> are involved in oxidative stress response.</article-title> <source><italic>Gene</italic></source> <volume>470</volume> <fpage>20</fpage>&#x2013;<lpage>30</lpage>. <pub-id pub-id-type="doi">10.1016/j.gene.2010.09.004</pub-id></citation></ref>
<ref id="B32"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Macovei</surname> <given-names>A.</given-names></name> <name><surname>Balestrazzi</surname> <given-names>A.</given-names></name> <name><surname>Confalonieri</surname> <given-names>M.</given-names></name> <name><surname>Fa&#x00E9;</surname> <given-names>M.</given-names></name> <name><surname>Carbonera</surname> <given-names>D.</given-names></name></person-group> (<year>2011b</year>). <article-title>New insights on the barrel medic MtOGG1 and MtFPG functions in relation to oxidative stress response in planta and during seed imbibition.</article-title> <source><italic>Plant Physiol. Biochem.</italic></source> <volume>49</volume> <fpage>1040</fpage>&#x2013;<lpage>1050</lpage>. <pub-id pub-id-type="doi">10.1016/j.plaphy.2011.05.007</pub-id></citation></ref>
<ref id="B33"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Macovei</surname> <given-names>A.</given-names></name> <name><surname>Gill</surname> <given-names>S. S.</given-names></name> <name><surname>Tuteja</surname> <given-names>N.</given-names></name></person-group> (<year>2012</year>). <article-title>microRNAs as promising tools for improving stress tolerance in rice.</article-title> <source><italic>Plant Signal. Behav.</italic></source> <volume>7</volume> <fpage>1296</fpage>&#x2013;<lpage>1301</lpage>. <pub-id pub-id-type="doi">10.4161/psb.21586</pub-id></citation></ref>
<ref id="B34"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Manfre</surname> <given-names>A. J.</given-names></name> <name><surname>LaHatte</surname> <given-names>G. A.</given-names></name> <name><surname>Climer</surname> <given-names>C. R.</given-names></name> <name><surname>Marcotte</surname> <given-names>W. R.</given-names></name></person-group> (<year>2009</year>). <article-title>Seed dehydration and the establishment of desiccation tolerance during seed maturation is altered in the <italic>Arabidopsis thaliana</italic> mutant atem6-1.</article-title> <source><italic>Plant Cell Physiol.</italic></source> <volume>50</volume> <fpage>243</fpage>&#x2013;<lpage>253</lpage>. <pub-id pub-id-type="doi">10.1093/pcp/pcn185</pub-id></citation></ref>
<ref id="B35"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Manfre</surname> <given-names>A. J.</given-names></name> <name><surname>Lanni</surname> <given-names>L. M.</given-names></name> <name><surname>Marcotte</surname> <given-names>W. R.</given-names></name></person-group> (<year>2006</year>). <article-title>The <italic>Arabidopsis</italic> group 1 late embryogenesis abundant protein ATEM6 is required for normal seed development.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>140</volume> <fpage>140</fpage>&#x2013;<lpage>149</lpage>. <pub-id pub-id-type="doi">10.1104/pp.105.072967</pub-id></citation></ref>
<ref id="B36"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Miura</surname> <given-names>K.</given-names></name> <name><surname>Lin</surname> <given-names>S. Y.</given-names></name> <name><surname>Yano</surname> <given-names>M.</given-names></name> <name><surname>Nagamine</surname> <given-names>T.</given-names></name></person-group> (<year>2002</year>). <article-title>Mapping quantitative trait loci controlling seed longevity in rice (<italic>Oryza sativa</italic> L.).</article-title> <source><italic>Theor. Appl. Genet.</italic></source> <volume>104</volume> <fpage>981</fpage>&#x2013;<lpage>986</lpage>. <pub-id pub-id-type="doi">10.1007/s00122-002-0872-x</pub-id></citation></ref>
<ref id="B37"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mudgett</surname> <given-names>M. B.</given-names></name> <name><surname>Clarke</surname> <given-names>S.</given-names></name></person-group> (<year>1993</year>). <article-title>Characterization of plant L-isoaspartyl methyltransferases that may be involved in seed survival: purification, cloning, and sequence analysis of the wheat germ enzyme.</article-title> <source><italic>Biochemistry</italic></source> <volume>32</volume> <fpage>11100</fpage>&#x2013;<lpage>11111</lpage>. <pub-id pub-id-type="doi">10.1021/bi00092a020</pub-id></citation></ref>
<ref id="B38"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mudgett</surname> <given-names>M. B.</given-names></name> <name><surname>Clarke</surname> <given-names>S.</given-names></name></person-group> (<year>1994</year>). <article-title>Hormonal and environmental responsiveness of a developmentally regulated protein repair l-isoaspartyl methyltransferase in wheat.</article-title> <source><italic>J. Biol. Chem.</italic></source> <volume>269</volume> <fpage>25605</fpage>&#x2013;<lpage>25612</lpage>.</citation></ref>
<ref id="B39"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>M&#x00FC;ller</surname> <given-names>K.</given-names></name> <name><surname>Carstens</surname> <given-names>A. C.</given-names></name> <name><surname>Linkies</surname> <given-names>A.</given-names></name> <name><surname>Torres</surname> <given-names>M. A.</given-names></name> <name><surname>Leubner-Metzger</surname> <given-names>G.</given-names></name></person-group> (<year>2009</year>). <article-title>The NADPH-oxidase AtrbohB plays a role in <italic>Arabidopsis</italic> seed after ripening.</article-title> <source><italic>New Phytol.</italic></source> <volume>184</volume> <fpage>885</fpage>&#x2013;<lpage>897</lpage>. <pub-id pub-id-type="doi">10.1111/j.1469-8137.2009.03005.x</pub-id></citation></ref>
<ref id="B40"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nagel</surname> <given-names>M.</given-names></name> <name><surname>Navakode</surname> <given-names>S.</given-names></name> <name><surname>Scheibal</surname> <given-names>V.</given-names></name> <name><surname>Baum</surname> <given-names>M.</given-names></name> <name><surname>Nachit</surname> <given-names>M.</given-names></name> <name><surname>R&#x00F6;der</surname> <given-names>M. S.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>The genetic basis of durum wheat germination and seedling growth under osmotic stress.</article-title> <source><italic>Biol. Plant.</italic></source> <volume>58</volume> <fpage>681</fpage>&#x2013;<lpage>688</lpage>. <pub-id pub-id-type="doi">10.1007/s10535-014-0436-3</pub-id></citation></ref>
<ref id="B41"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Og&#x00E9;</surname> <given-names>L.</given-names></name> <name><surname>Bourdais</surname> <given-names>G.</given-names></name> <name><surname>Bove</surname> <given-names>J.</given-names></name> <name><surname>Collet</surname> <given-names>B.</given-names></name> <name><surname>Godin</surname> <given-names>B.</given-names></name> <name><surname>Granier</surname> <given-names>F.</given-names></name><etal/></person-group> (<year>2008</year>). <article-title>Protein repair L-isoaspartyl methyltransferase 1 is involved in both seed longevity and germination vigor in <italic>Arabidopsis</italic>.</article-title> <source><italic>Plant Cell</italic></source> <volume>20</volume> <fpage>3022</fpage>&#x2013;<lpage>3037</lpage>. <pub-id pub-id-type="doi">10.1105/tpc.108.058479</pub-id></citation></ref>
<ref id="B42"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Parkhey</surname> <given-names>S.</given-names></name> <name><surname>Naithani</surname> <given-names>S. C.</given-names></name> <name><surname>Keshavkant</surname> <given-names>S.</given-names></name></person-group> (<year>2012</year>). <article-title>ROS production and lipid catabolism in desiccating Shorea robusta seeds during aging.</article-title> <source><italic>Plant Physiol. Biochem.</italic></source> <volume>57</volume> <fpage>261</fpage>&#x2013;<lpage>267</lpage>. <pub-id pub-id-type="doi">10.1016/j.plaphy.2012.06.008</pub-id></citation></ref>
<ref id="B43"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Petla</surname> <given-names>B. P.</given-names></name> <name><surname>Kamble</surname> <given-names>N. U.</given-names></name> <name><surname>Kumar</surname> <given-names>M.</given-names></name> <name><surname>Verma</surname> <given-names>P.</given-names></name> <name><surname>Ghosh</surname> <given-names>S.</given-names></name> <name><surname>Singh</surname> <given-names>A.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>Rice PROTEIN l-ISOASPARTYL METHYLTRANSFERASE isoforms differentially accumulate during seed maturation to restrict deleterious isoAsp and reactive oxygen species accumulation and are implicated in seed vigor and longevity.</article-title> <source><italic>New Phytol.</italic></source> <volume>211</volume> <fpage>627</fpage>&#x2013;<lpage>645</lpage>. <pub-id pub-id-type="doi">10.1111/nph.13923</pub-id></citation></ref>
<ref id="B44"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prieto-Dapena</surname> <given-names>P.</given-names></name> <name><surname>Castano</surname> <given-names>R.</given-names></name> <name><surname>Almoguera</surname> <given-names>C.</given-names></name> <name><surname>Jordano</surname> <given-names>J.</given-names></name></person-group> (<year>2006</year>). <article-title>Improved resistance to controlled deterioration in transgenic seeds.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>142</volume> <fpage>1102</fpage>&#x2013;<lpage>1112</lpage>. <pub-id pub-id-type="doi">10.1104/pp.106.087817</pub-id></citation></ref>
<ref id="B45"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rajjou</surname> <given-names>L.</given-names></name> <name><surname>Duval</surname> <given-names>M.</given-names></name> <name><surname>Gallardo</surname> <given-names>K.</given-names></name> <name><surname>Catusse</surname> <given-names>J.</given-names></name> <name><surname>Bally</surname> <given-names>J.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>Seed germination and vigor.</article-title> <source><italic>Annu. Rev. Plant Biol.</italic></source> <volume>63</volume> <fpage>507</fpage>&#x2013;<lpage>533</lpage>. <pub-id pub-id-type="doi">10.1146/annurev-arplant-042811-105550</pub-id></citation></ref>
<ref id="B46"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rajjou</surname> <given-names>L.</given-names></name> <name><surname>Lovigny</surname> <given-names>Y.</given-names></name> <name><surname>Groot</surname> <given-names>S. P. C.</given-names></name> <name><surname>Belghazi</surname> <given-names>M.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name> <name><surname>Job</surname> <given-names>D.</given-names></name></person-group> (<year>2008</year>). <article-title>Proteome-wide characterization of seed aging in <italic>Arabidopsis</italic>: a comparison between artificial and natural aging protocols.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>148</volume> <fpage>620</fpage>&#x2013;<lpage>641</lpage>. <pub-id pub-id-type="doi">10.1104/pp.108.123141</pub-id></citation></ref>
<ref id="B47"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ratajczak</surname> <given-names>E.</given-names></name> <name><surname>Ma&#x0142;ecka</surname> <given-names>A.</given-names></name> <name><surname>Bagniewska-Zadworna</surname> <given-names>A.</given-names></name> <name><surname>Kalemba</surname> <given-names>E. M.</given-names></name></person-group> (<year>2015</year>). <article-title>The production, localization and spreading of reactive oxygen species contributes to the low vitality of long-term stored common beech (<italic>Fagus sylvatica</italic> L.) seeds.</article-title> <source><italic>J. Plant Physiol.</italic></source> <volume>174</volume> <fpage>147</fpage>&#x2013;<lpage>156</lpage>. <pub-id pub-id-type="doi">10.1016/j.jplph.2014.08.021</pub-id></citation></ref>
<ref id="B48"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Revilla</surname> <given-names>P.</given-names></name> <name><surname>Butr&#x00F3;n</surname> <given-names>A.</given-names></name> <name><surname>Rodr&#x00ED;guez</surname> <given-names>V. M.</given-names></name> <name><surname>Malvar</surname> <given-names>R. A.</given-names></name> <name><surname>Ord&#x00E1;s</surname> <given-names>A.</given-names></name></person-group> (<year>2009</year>). <article-title>Identification of genes related to germination in aged maize seed by screening natural variability.</article-title> <source><italic>J. Exp. Bot.</italic></source> <volume>60</volume> <fpage>4151</fpage>&#x2013;<lpage>4157</lpage>. <pub-id pub-id-type="doi">10.1093/jxb/erp249</pub-id></citation></ref>
<ref id="B49"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Roqueiro</surname> <given-names>G.</given-names></name> <name><surname>Facorro</surname> <given-names>G. B.</given-names></name> <name><surname>Huarte</surname> <given-names>M. G.</given-names></name> <name><surname>Rub&#x00ED;n de Celis</surname> <given-names>E.</given-names></name> <name><surname>Garcia</surname> <given-names>F.</given-names></name></person-group> (<year>2010</year>). <article-title>Effects of photooxidation on membrane integrity in <italic>Salix nigra</italic> seeds.</article-title> <source><italic>Ann. Bot.</italic></source> <volume>105</volume> <fpage>1027</fpage>&#x2013;<lpage>1034</lpage>. <pub-id pub-id-type="doi">10.1093/aob/mcq067</pub-id></citation></ref>
<ref id="B50"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sattler</surname> <given-names>S. E.</given-names></name> <name><surname>Gilliland</surname> <given-names>L. U.</given-names></name> <name><surname>Magallanes-Lundback</surname> <given-names>M.</given-names></name> <name><surname>Pollard</surname> <given-names>M.</given-names></name> <name><surname>DellaPenna</surname> <given-names>D.</given-names></name></person-group> (<year>2004</year>). <article-title>Vitamin E is essential for seed longevity and for preventing lipid peroxidation during germination.</article-title> <source><italic>Plant Cell</italic></source> <volume>16</volume> <fpage>1419</fpage>&#x2013;<lpage>1432</lpage>. <pub-id pub-id-type="doi">10.1105/tpc.021360</pub-id></citation></ref>
<ref id="B51"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Seo</surname> <given-names>Y. S.</given-names></name> <name><surname>Kim</surname> <given-names>E. Y.</given-names></name> <name><surname>Kim</surname> <given-names>W. T.</given-names></name></person-group> (<year>2011</year>). <article-title>The <italic>Arabidopsis</italic> sn-1-specific mitochondrial acylhydrolase AtDLAH is positively correlated with seed viability.</article-title> <source><italic>J. Exp. Bot.</italic></source> <volume>62</volume> <fpage>5683</fpage>&#x2013;<lpage>5698</lpage>. <pub-id pub-id-type="doi">10.1007/s11103-010-9670-z</pub-id></citation></ref>
<ref id="B52"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shin</surname> <given-names>J. H.</given-names></name> <name><surname>Kim</surname> <given-names>S. R.</given-names></name> <name><surname>An</surname> <given-names>G.</given-names></name></person-group> (<year>2009</year>). <article-title>Rice aldehyde dehydrogenase7 is needed for seed maturation and viability.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>149</volume> <fpage>905</fpage>&#x2013;<lpage>915</lpage>. <pub-id pub-id-type="doi">10.1104/pp.108.130716</pub-id></citation></ref>
<ref id="B53"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stacy</surname> <given-names>R. A.</given-names></name> <name><surname>Nordeng</surname> <given-names>T. W.</given-names></name> <name><surname>Culi&#x00E1;&#x00F1;ez-Maci&#x00E0;</surname> <given-names>F. A.</given-names></name> <name><surname>Aalen</surname> <given-names>R. B.</given-names></name></person-group> (<year>1999</year>). <article-title>The dormancy-related peroxiredoxin anti-oxidant, PER1, is localized to the nucleus of barley embryo and aleurone cells.</article-title> <source><italic>Plant J.</italic></source> <volume>19</volume> <fpage>1</fpage>&#x2013;<lpage>8</lpage>. <pub-id pub-id-type="doi">10.1046/j.1365-313X.1999.00488.x</pub-id></citation></ref>
<ref id="B54"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sun</surname> <given-names>Q.</given-names></name> <name><surname>Wang</surname> <given-names>J.</given-names></name> <name><surname>Sun</surname> <given-names>B.</given-names></name></person-group> (<year>2007</year>). <article-title>Advances on seed vigor physiological and genetic mechanisms.</article-title> <source><italic>Agric. Sci. China</italic></source> <volume>6</volume> <fpage>1060</fpage>&#x2013;<lpage>1066</lpage>. <pub-id pub-id-type="doi">10.1016/S1671-2927(07)60147-3</pub-id></citation></ref>
<ref id="B55"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Suzuki</surname> <given-names>Y.</given-names></name> <name><surname>Matsukura</surname> <given-names>U.</given-names></name></person-group> (<year>1997</year>). <article-title>Lipoxygenase activity in maturing and germination rice seeds with and without lipoxygenase-3 in mature seeds.</article-title> <source><italic>Plant Sci.</italic></source> <volume>125</volume> <fpage>119</fpage>&#x2013;<lpage>126</lpage>. <pub-id pub-id-type="doi">10.1016/S0168-9452(97)00061-7</pub-id></citation></ref>
<ref id="B56"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Talai</surname> <given-names>S.</given-names></name> <name><surname>Sen-Mandi</surname> <given-names>S.</given-names></name></person-group> (<year>2010</year>). <article-title>Seed vigour-related DNA marker in rice shows homology with acetyl CoA carboxylase gene.</article-title> <source><italic>Acta Physiol. Plant.</italic></source> <volume>32</volume> <fpage>153</fpage>&#x2013;<lpage>167</lpage>. <pub-id pub-id-type="doi">10.1007/s11738-009-0392-2</pub-id></citation></ref>
<ref id="B57"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thapar</surname> <given-names>N.</given-names></name> <name><surname>Kim</surname> <given-names>A. K.</given-names></name> <name><surname>Clarke</surname> <given-names>S.</given-names></name></person-group> (<year>2001</year>). <article-title>Distinct patterns of expression but similar biochemical properties of protein L-isoaspartyl methyltransferase in higher plants.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>125</volume> <fpage>1023</fpage>&#x2013;<lpage>1035</lpage>. <pub-id pub-id-type="doi">10.1104/pp.125.2.1023</pub-id></citation></ref>
<ref id="B58"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vandecasteele</surname> <given-names>C.</given-names></name> <name><surname>Teulat-Merah</surname> <given-names>B.</given-names></name> <name><surname>Mor&#x00E8;re-Le Paven</surname> <given-names>M. C.</given-names></name> <name><surname>Leprince</surname> <given-names>O.</given-names></name> <name><surname>Ly Vu</surname> <given-names>B.</given-names></name> <name><surname>Viau</surname> <given-names>L.</given-names></name><etal/></person-group> (<year>2011</year>). <article-title>Quantitative trait loci analysis reveals a correlation between the ratio of sucrose/raffinose family oligosaccharides and seed vigour in <italic>Medicago truncatula</italic>.</article-title> <source><italic>Plant Cell Environ.</italic></source> <volume>34</volume> <fpage>1473</fpage>&#x2013;<lpage>1487</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-3040.2011.02346.x</pub-id></citation></ref>
<ref id="B59"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vanderauwera</surname> <given-names>S.</given-names></name> <name><surname>Suzuki</surname> <given-names>N.</given-names></name> <name><surname>Miller</surname> <given-names>G.</given-names></name> <name><surname>van de Cotte</surname> <given-names>B.</given-names></name> <name><surname>Morsa</surname> <given-names>S.</given-names></name> <name><surname>Ravanat</surname> <given-names>J. L.</given-names></name><etal/></person-group> (<year>2011</year>). <article-title>Extranuclear protection of chromosomal DNA from oxidative stress.</article-title> <source><italic>Proc. Natl. Acad. Sci. U.S.A.</italic></source> <volume>108</volume> <fpage>1711</fpage>&#x2013;<lpage>1716</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1018359108</pub-id></citation></ref>
<ref id="B60"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ventura</surname> <given-names>L.</given-names></name> <name><surname>Don&#x00E0;</surname> <given-names>M.</given-names></name> <name><surname>Macovei</surname> <given-names>A.</given-names></name> <name><surname>Carbonera</surname> <given-names>D.</given-names></name> <name><surname>Buttafava</surname> <given-names>A.</given-names></name> <name><surname>Mondoni</surname> <given-names>A.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>Understanding the molecular pathways associated with seed vigor.</article-title> <source><italic>Plant Physiol. Biochem.</italic></source> <volume>60</volume> <fpage>196</fpage>&#x2013;<lpage>206</lpage>. <pub-id pub-id-type="doi">10.1016/j.plaphy.2012.07.031</pub-id></citation></ref>
<ref id="B61"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Verma</surname> <given-names>P.</given-names></name> <name><surname>Kaur</surname> <given-names>H.</given-names></name> <name><surname>Petla</surname> <given-names>B. P.</given-names></name> <name><surname>Rao</surname> <given-names>V.</given-names></name> <name><surname>Saxena</surname> <given-names>S. C.</given-names></name> <name><surname>Majee</surname> <given-names>M.</given-names></name></person-group> (<year>2013</year>). <article-title>PROTEIN L-ISOASPARTYL METHYLTRANSFERASE2 is differentially expressed in chickpea and enhances seed vigor and longevity by reducing abnormal isoaspartyl accumulation predominantly in seed nuclear proteins.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>161</volume> <fpage>1141</fpage>&#x2013;<lpage>1157</lpage>. <pub-id pub-id-type="doi">10.1104/pp.112.206243</pub-id></citation></ref>
<ref id="B62"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>L.</given-names></name> <name><surname>Ma</surname> <given-names>H.</given-names></name> <name><surname>Song</surname> <given-names>L.</given-names></name> <name><surname>Shu</surname> <given-names>Y.</given-names></name> <name><surname>Gu</surname> <given-names>W.</given-names></name></person-group> (<year>2012</year>). <article-title>Comparative proteomics analysis reveals the mechanism of pre-harvest seed deterioration of soybean under high temperature and humidity stress.</article-title> <source><italic>J. Proteomics</italic></source> <volume>75</volume> <fpage>2109</fpage>&#x2013;<lpage>2127</lpage>. <pub-id pub-id-type="doi">10.1016/j.jprot.2012.01.007</pub-id></citation></ref>
<ref id="B63"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>R.</given-names></name> <name><surname>Shen</surname> <given-names>W. B.</given-names></name> <name><surname>Liu</surname> <given-names>L.</given-names></name> <name><surname>Jiang</surname> <given-names>L.</given-names></name> <name><surname>Zhai</surname> <given-names>H.</given-names></name> <name><surname>Wan</surname> <given-names>J.</given-names></name></person-group> (<year>2008</year>). <article-title>Prokaryotic expression, purification and characterization of a novel rice seed lipoxygenase gene OsLOX1.</article-title> <source><italic>Rice Sci.</italic></source> <volume>15</volume> <fpage>88</fpage>&#x2013;<lpage>94</lpage>. <pub-id pub-id-type="doi">10.1016/S1672-6308(08)60025-6</pub-id></citation></ref>
<ref id="B64"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>Y. Y.</given-names></name> <name><surname>Hecker</surname> <given-names>A. G.</given-names></name> <name><surname>Hauser</surname> <given-names>B. A.</given-names></name></person-group> (<year>2014</year>). <article-title>The APX4 locus regulates seed vigor and seedling growth in <italic>Arabidopsis thaliana</italic>.</article-title> <source><italic>Planta</italic></source> <volume>239</volume> <fpage>909</fpage>&#x2013;<lpage>919</lpage>. <pub-id pub-id-type="doi">10.1007/s00425-014-2025-2</pub-id></citation></ref>
<ref id="B65"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Waterworth</surname> <given-names>W. M.</given-names></name> <name><surname>Masnavi</surname> <given-names>G.</given-names></name> <name><surname>Bhardwaj</surname> <given-names>R. M.</given-names></name> <name><surname>Jiang</surname> <given-names>Q.</given-names></name> <name><surname>Bray</surname> <given-names>C. M.</given-names></name> <name><surname>West</surname> <given-names>C. E.</given-names></name></person-group> (<year>2010</year>). <article-title>A plant DNA ligase is an important determinant of seed longevity.</article-title> <source><italic>Plant J.</italic></source> <volume>63</volume> <fpage>848</fpage>&#x2013;<lpage>860</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-313X.2010.04285.x</pub-id></citation></ref>
<ref id="B66"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wei</surname> <given-names>Y. D.</given-names></name> <name><surname>Xu</surname> <given-names>H. B.</given-names></name> <name><surname>Diao</surname> <given-names>L. R.</given-names></name> <name><surname>Zhu</surname> <given-names>Y. S.</given-names></name> <name><surname>Xie</surname> <given-names>H. G.</given-names></name> <name><surname>Cai</surname> <given-names>Q. H.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Protein repair L-isoaspartyl methyltransferase 1 (PIMT1) in rice improves seed longevity by preserving embryo vigor and viability.</article-title> <source><italic>Plant Mol. Biol.</italic></source> <volume>89</volume> <fpage>475</fpage>&#x2013;<lpage>492</lpage>. <pub-id pub-id-type="doi">10.1007/s11103-015-0383-1</pub-id></citation></ref>
<ref id="B67"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Williams</surname> <given-names>B.</given-names></name> <name><surname>Tsang</surname> <given-names>A.</given-names></name></person-group> (<year>1991</year>). <article-title>A maize gene expressed during embryogenesis is abscisic acid-inducible and highly conserved.</article-title> <source><italic>Plant Mol. Biol.</italic></source> <volume>1991</volume> <fpage>919</fpage>&#x2013;<lpage>923</lpage>. <pub-id pub-id-type="doi">10.1007/BF00015086</pub-id></citation></ref>
<ref id="B68"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wu</surname> <given-names>X.</given-names></name> <name><surname>Liu</surname> <given-names>H.</given-names></name> <name><surname>Wang</surname> <given-names>W.</given-names></name> <name><surname>Chen</surname> <given-names>S.</given-names></name> <name><surname>Hu</surname> <given-names>X.</given-names></name> <name><surname>Li</surname> <given-names>C.</given-names></name></person-group> (<year>2011</year>). <article-title>Proteomic analysis of seed viability in maize.</article-title> <source><italic>Acta Physiol. Plant.</italic></source> <volume>33</volume> <fpage>181</fpage>&#x2013;<lpage>191</lpage>. <pub-id pub-id-type="doi">10.1007/s11738-010-0536-4</pub-id></citation></ref>
<ref id="B69"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xi</surname> <given-names>D. M.</given-names></name> <name><surname>Liu</surname> <given-names>W. S.</given-names></name> <name><surname>Yang</surname> <given-names>G. D.</given-names></name> <name><surname>Wu</surname> <given-names>C. A.</given-names></name> <name><surname>Zheng</surname> <given-names>C. C.</given-names></name></person-group> (<year>2010</year>). <article-title>Seed-specific overexpression of antioxidant genes in <italic>Arabidopsis</italic> enhances oxidative stress tolerance during germination and early seedling growth.</article-title> <source><italic>Plant Biotechnol. J.</italic></source> <volume>8</volume> <fpage>796</fpage>&#x2013;<lpage>806</lpage>. <pub-id pub-id-type="doi">10.1111/j.1467-7652.2010.00509.x</pub-id></citation></ref>
<ref id="B70"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xin</surname> <given-names>X.</given-names></name> <name><surname>Tian</surname> <given-names>Q.</given-names></name> <name><surname>Yin</surname> <given-names>G.</given-names></name> <name><surname>Chen</surname> <given-names>X.</given-names></name> <name><surname>Zhang</surname> <given-names>J.</given-names></name> <name><surname>Ng</surname> <given-names>S.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Reduced mitochondrial and ascorbate-glutathione activity after artificial ageing in soybean seed.</article-title> <source><italic>J. Plant Physiol.</italic></source> <volume>171</volume> <fpage>140</fpage>&#x2013;<lpage>147</lpage>. <pub-id pub-id-type="doi">10.1016/j.jplph.2013.09.016</pub-id></citation></ref>
<ref id="B71"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xu</surname> <given-names>Q.</given-names></name> <name><surname>Belcastro</surname> <given-names>M. P.</given-names></name> <name><surname>Villa</surname> <given-names>S. T.</given-names></name> <name><surname>Dinkins</surname> <given-names>R. D.</given-names></name> <name><surname>Clarke</surname> <given-names>S. G.</given-names></name> <name><surname>Downie</surname> <given-names>A. B.</given-names></name></person-group> (<year>2004</year>). <article-title>A second protein L-isoaspartyl methyltransferase gene in <italic>Arabidopsis</italic> produces two transcripts whose products are sequestered in the nucleus.</article-title> <source><italic>Plant Physiol.</italic></source> <volume>136</volume> <fpage>2652</fpage>&#x2013;<lpage>2664</lpage>. <pub-id pub-id-type="doi">10.1104/pp.104.046094</pub-id></citation></ref>
<ref id="B72"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yacoubi</surname> <given-names>R.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name> <name><surname>Belghazi</surname> <given-names>M.</given-names></name> <name><surname>Chaibi</surname> <given-names>W.</given-names></name> <name><surname>Job</surname> <given-names>D.</given-names></name></person-group> (<year>2011</year>). <article-title>Toward characterizing seed vigor in alfalfa through proteomic analysis of germination and priming.</article-title> <source><italic>J. Proteome Res.</italic></source> <volume>10</volume> <fpage>3891</fpage>&#x2013;<lpage>3903</lpage>. <pub-id pub-id-type="doi">10.1021/pr101274f</pub-id></citation></ref>
<ref id="B73"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yacoubi</surname> <given-names>R.</given-names></name> <name><surname>Job</surname> <given-names>C.</given-names></name> <name><surname>Belghazi</surname> <given-names>M.</given-names></name> <name><surname>Job</surname> <given-names>D.</given-names></name></person-group> (<year>2013</year>). <article-title>Proteomic analysis of the enhancement of seed vigour in osmoprimed alfalfa seeds germinated under salinity stress.</article-title> <source><italic>Seed Sci. Res.</italic></source> <volume>23</volume> <fpage>99</fpage>&#x2013;<lpage>110</lpage>. <pub-id pub-id-type="doi">10.1017/S0960258513000093</pub-id></citation></ref>
<ref id="B74"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yin</surname> <given-names>G.</given-names></name> <name><surname>Xin</surname> <given-names>X.</given-names></name> <name><surname>Song</surname> <given-names>C.</given-names></name> <name><surname>Chen</surname> <given-names>X.</given-names></name> <name><surname>Zhang</surname> <given-names>J.</given-names></name> <name><surname>Wu</surname> <given-names>S.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Activity levels and expression of antioxidant enzymes in the ascorbate-glutathione cycle in artificially aged rice seed.</article-title> <source><italic>Plant Physiol. Biochem.</italic></source> <volume>80</volume> <fpage>1</fpage>&#x2013;<lpage>9</lpage>. <pub-id pub-id-type="doi">10.1016/j.plaphy.2014.03.006</pub-id></citation></ref>
<ref id="B75"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhou</surname> <given-names>Y.</given-names></name> <name><surname>Chen</surname> <given-names>H.</given-names></name> <name><surname>Chu</surname> <given-names>P.</given-names></name> <name><surname>Li</surname> <given-names>Y.</given-names></name> <name><surname>Tan</surname> <given-names>B.</given-names></name> <name><surname>Ding</surname> <given-names>Y.</given-names></name><etal/></person-group> (<year>2012a</year>). <article-title>NnHSP17.5, a cytosolic class II small heat shock protein gene from <italic>Nelumbo nucifera</italic>, contributes to seed germination vigor and seedling thermotolerance in transgenic <italic>Arabidopsis</italic>.</article-title> <source><italic>Plant Cell Rep.</italic></source> <volume>31</volume> <fpage>379</fpage>&#x2013;<lpage>389</lpage>. <pub-id pub-id-type="doi">10.1007/s00299-011-1173-0</pub-id></citation></ref>
<ref id="B76"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhou</surname> <given-names>Y.</given-names></name> <name><surname>Chu</surname> <given-names>P.</given-names></name> <name><surname>Chen</surname> <given-names>H.</given-names></name> <name><surname>Li</surname> <given-names>Y.</given-names></name> <name><surname>Liu</surname> <given-names>J.</given-names></name> <name><surname>Ding</surname> <given-names>Y.</given-names></name><etal/></person-group> (<year>2012b</year>). <article-title>Overexpression of <italic>Nelumbo nucifera</italic> metallothioneins 2a and 3 enhances seed germination vigor in <italic>Arabidopsis</italic>.</article-title> <source><italic>Planta</italic></source> <volume>235</volume> <fpage>523</fpage>&#x2013;<lpage>537</lpage>. <pub-id pub-id-type="doi">10.1007/s00425-011-1527-4</pub-id></citation></ref>
</ref-list>
<glossary>
<title>Abbreviations</title>
<def-list id="DL1">
<def-item>
<term>CDT</term>
<def>
<p>controlled deterioration test</p>
</def>
</def-item>
<def-item>
<term>GABA</term>
<def>
<p>&#x03B3;-aminobutyric acid</p>
</def>
</def-item>
<def-item>
<term>GM</term>
<def>
<p>genetic modification</p>
</def>
</def-item>
<def-item>
<term>HSF</term>
<def>
<p>heat stress transcription factor</p>
</def>
</def-item>
<def-item>
<term>HSPs</term>
<def>
<p>heat shock proteins</p>
</def>
</def-item>
<def-item>
<term>isoAsp</term>
<def>
<p><sc>L</sc>-isoaspartyl residues</p>
</def>
</def-item>
<def-item>
<term>LEA</term>
<def>
<p>late embryogenesis abundant</p>
</def>
</def-item>
<def-item>
<term>OsALDH7</term>
<def>
<p>rice aldehyde dehydrogenase 7</p>
</def>
</def-item>
<def-item>
<term>OsPIMT1</term>
<def>
<p>rice protein l-isoaspartyl methyltransferase</p>
</def>
</def-item>
<def-item>
<term>PIMT</term>
<def>
<p>protein l-isoaspartyl methyltransferase</p>
</def>
</def-item>
<def-item>
<term>PLD</term>
<def>
<p>phospholipase</p>
</def>
</def-item>
<def-item>
<term>QTLs</term>
<def>
<p>quantitative trait loci</p>
</def>
</def-item>
<def-item>
<term>ROS</term>
<def>
<p>reactive oxygen species</p>
</def>
</def-item>
<def-item>
<term>SSADH</term>
<def>
<p>succinic-semialdehyde dehydrogenase</p>
</def>
</def-item>
</def-list>
</glossary>
</back>
</article>