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<journal-id journal-id-type="publisher-id">Front. Physiol.</journal-id>
<journal-title>Frontiers in Physiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Physiol.</abbrev-journal-title>
<issn pub-type="epub">1664-042X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-id pub-id-type="publisher-id">1222099</article-id>
<article-id pub-id-type="doi">10.3389/fphys.2023.1222099</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Physiology</subject>
<subj-group>
<subject>Review</subject>
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</article-categories>
<title-group>
<article-title>The pathology of oxidative stress-induced autophagy in a chronic rotator cuff enthesis tear</article-title>
<alt-title alt-title-type="left-running-head">Prasetia et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fphys.2023.1222099">10.3389/fphys.2023.1222099</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes" equal-contrib="yes">
<name>
<surname>Prasetia</surname>
<given-names>Renaldi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1790404/overview"/>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Purwana</surname>
<given-names>Siti Zainab Bani</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2310388/overview"/>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Lesmana</surname>
<given-names>Ronny</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1234257/overview"/>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Herman</surname>
<given-names>Herry</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Chernchujit</surname>
<given-names>Bancha</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Rasyid</surname>
<given-names>Hermawan Nagar</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Orthopaedics&#x2014;Traumatology</institution>, <institution>Hasan-Sadikin General Hospital</institution>, <institution>Universitas Padjadjaran</institution>, <addr-line>Bandung</addr-line>, <country>Indonesia</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Faculty of Medicine</institution>, <institution>Hasan-Sadikin General Hospital</institution>, <institution>Universitas Padjadjaran</institution>, <addr-line>Bandung</addr-line>, <country>Indonesia</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Department of Biomedical Sciences</institution>, <institution>Division of Physiology</institution>, <institution>Faculty of Medicine</institution>, <institution>Universitas Padjadjaran</institution>, <addr-line>Bandung</addr-line>, <country>Indonesia</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Department of Orthopaedics Surgery</institution>, <institution>Faculty of Medicine</institution>, <institution>Thammasat University</institution>, <addr-line>Rangsit</addr-line>, <country>Thailand</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2319327/overview">Yuhei Uda</ext-link>, Abcam, United States</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/122782/overview">Chi-Ming Wong</ext-link>, Hong Kong Polytechnic University, Hong Kong SAR, China</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/568204/overview">Rajeshwary Ghosh</ext-link>, University of South Dakota, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Renaldi Prasetia, <email>renaldi.prasetia@gmail.com</email>
</corresp>
<fn fn-type="equal" id="fn001">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this work</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>11</day>
<month>09</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1222099</elocation-id>
<history>
<date date-type="received">
<day>13</day>
<month>05</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>28</day>
<month>08</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Prasetia, Purwana, Lesmana, Herman, Chernchujit and Rasyid.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Prasetia, Purwana, Lesmana, Herman, Chernchujit and Rasyid</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Partial-thickness rotator cuff tears (PTRCTs) are often found in daily orthopedic practice, with most of the tears occurring in middle-aged patients. An anaerobic process and imbalanced oxygenation have been observed in PTRCTs, resulting in oxidative stress. Studies have shown the roles of oxidative stress in autophagy and the potential of unregulated mechanisms causing disturbance in soft tissue healing. This article aims to review literature works and summarize the potential pathology of oxidative stress and unregulated autophagy in the rotator cuff enthesis correlated with chronicity. We collected and reviewed the literature using appropriate keywords, in addition to the manually retrieved literature. Autophagy is a normal mechanism of tissue repair or conversion to energy needed for the repair of rotator cuff tears. However, excessive mechanisms will degenerate the tendon, resulting in an abnormal state. Chronic overloading of the enthesis in PTRCTs and the hypovascular nature of the proximal tendon insertion will lead to hypoxia. The hypoxia state results in oxidative stress. An autophagy mechanism is induced in hypoxia via hypoxia-inducible factors (HIFs) 1/Bcl-2 adenovirus E1B 19-kDa interacting protein (BNIP) 3, releasing beclin-1, which results in autophagy induction. Reactive oxygen species (ROS) accumulation would induce autophagy as the regulator of cell oxidation. Oxidative stress will also remove the mammalian target of rapamycin (mTOR) from the induction complex, causing phosphorylation and initiating autophagy. Hypoxia and endoplasmic reticulum (ER) stress would initiate unfolded protein response (UPR) through protein kinase RNA-like ER kinase (PERK) and activate transcription factor 4, which induces autophagy. Oxidative stress occurring in the hypovascularized chronic rotator cuff tear due to hypoxia and ROS accumulation would result in unregulated autophagy directly or autophagy mediated by HIF-1, mTOR, and UPR. These mechanisms would disrupt enthesis healing.</p>
</abstract>
<kwd-group>
<kwd>rotator cuff tear</kwd>
<kwd>enthesis healing</kwd>
<kwd>chronicity</kwd>
<kwd>oxidative stress</kwd>
<kwd>autophagy</kwd>
</kwd-group>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Skeletal Physiology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>A rotator cuff tear is a common shoulder soft tissue injury in adults (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>; <xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>; <xref ref-type="bibr" rid="B29">Kwong et al., 2019</xref>). The incidence of tear repair failure is high (ranging from 30% to 94%), despite the advancements in surgical techniques (<xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>; <xref ref-type="bibr" rid="B4">Chalmers et al., 2016</xref>; <xref ref-type="bibr" rid="B36">Prabhath et al., 2021</xref>). Inadequate response to tissue healing in the enthesis could be the cause of this problem (<xref ref-type="bibr" rid="B36">Prabhath et al., 2021</xref>). The prevalence rate of partial-thickness rotator cuff tears (PTRCTs) ranges from 13% to 32%, which is as common as full-thickness rotator cuff tears (FTRCTs) (<xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>). PTRCTs are often found in daily orthopedic practice, with most of the tears occurring in elderly patients (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>). The known natural history of a rotator cuff tear described in the literature is still lacking. Understanding of the nature of this injury could be helpful in the application of investigations, follow-ups, treatment determination, and complication prevention. Further knowledge of the injury, healing, and regeneration mechanisms of a rotator cuff tear is needed to elaborate the causes of the recurrent tear (<xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>; <xref ref-type="bibr" rid="B4">Chalmers et al., 2016</xref>; <xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>).</p>
<p>In a rotator cuff tear, tear progression would occur, creating a larger tear (&#x3e;2&#x2013;5&#xa0;mm increase in size) or transforming a partial tear to a full-thickness tear (28&#x2013;41.53%) (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>; <xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>; <xref ref-type="bibr" rid="B29">Kwong et al., 2019</xref>; <xref ref-type="bibr" rid="B35">Oh et al., 2020</xref>; <xref ref-type="bibr" rid="B20">Ichinose et al., 2021</xref>; <xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>). <xref ref-type="bibr" rid="B32">Nakamura et al. (2015)</xref> observed tear progression by examining the initial localization and then comparing it to the location of the spread and found that 22.8% of the injury spreads posteriorly or anteriorly. PTRCTs have less risk of tear progression at 8.4&#x2013;44% in 6&#x2013;100&#xa0;months and 0.26% progression per month compared to FTRCTs at 37.4&#x2013;82.4% in 6&#x2013;100&#xa0;months and 0.85%&#x2013;1.00% progression per month (<xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>; <xref ref-type="bibr" rid="B27">Kim et al., 2017</xref>; <xref ref-type="bibr" rid="B29">Kwong et al., 2019</xref>; <xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>). With the aforementioned progression rate, we still have to consider the possibility of an increase in the rate when tears reach a certain size (<xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>). <xref ref-type="bibr" rid="B25">Keener et al. (2015)</xref> showed that a tear in the dominant shoulder had greater tear enlargement (63%) than a tear in the non-dominant side (42%), indicating the influence of the activity level. Another mechanical mechanism of tear progression is mechanical impingement caused by a subacromial spur, but this is mainly observed in a tear located at the anterior part of the superior facet (<xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>). Biological causes, such as degeneration, still play an important role in tear progression (<xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>; <xref ref-type="bibr" rid="B16">Hebert-Davies et al., 2017</xref>). Conservative treatment is often used for an asymptomatic tear; however, asymptomatic and symptomatic tears had no significant differences in the progression rate (<xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>; <xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>). This enlargement would decrease shoulder function significantly compared to the shoulder function in the initial tear state (<xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>). The progression into a greater tear not only affects tear severity in patients but also contributes to pain development, inducing new pain from asymptomatic tears or increasing the visual analog score by an average of 3 points, contributing to the decline in shoulder function (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>; <xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>; <xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). The pain felt by patients could be due to a few pathology mechanisms such as impingement and inflammation (<xref ref-type="bibr" rid="B20">Ichinose et al., 2021</xref>). Tendon healing after surgery is decreased in an enlarged tear (<xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>).</p>
<p>Problems arising in healing failure could be caused by factors such as the technique used for the repair, early mechanical failure from an unsound repair, and biological healing failure. Rotator cuff tear repair with tissue preservation had shown a greater re-tear rate than repair with bursal tissue detachment. Pathological tissues not successfully removed in the repair will be retained, often the cause of recurrent pain (<xref ref-type="bibr" rid="B37">Prasetia et al., 2021</xref>). <xref ref-type="bibr" rid="B8">Deniz et al. (2014)</xref> showed that fatty degeneration and atrophy occurring before repair remain unresolved even after repair treatment. These factors arise as a prominent problem in healing, and pathological processes need to be considered to solve those (<xref ref-type="bibr" rid="B37">Prasetia et al., 2021</xref>).</p>
<p>An anaerobic process and imbalanced oxygenation have been observed in PTRCTs, resulting in oxidative stress (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). The induction of cascades by build-up and prolonged oxidative stress could result in unwanted unregulated mechanisms occurring in the chronically torn enthesis (<xref ref-type="bibr" rid="B19">Hirunsai and Srikuea, 2021</xref>; <xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Studies have elucidated the roles of oxidative stress in autophagy and the potential of unregulated mechanisms causing disturbance in soft tissue healing, with autophagocytic pathways that remodel and degenerate the tissue to adapt to the chronic rotator cuff tear (<xref ref-type="bibr" rid="B14">Gumucio et al., 2012</xref>; <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea, 2021</xref>). Tissue degeneration can be grossly and histologically observed in the chronic rotator cuff tears as denervation degeneration or atrophy and fatty infiltration (<xref ref-type="bibr" rid="B9">Ditsios et al., 2014</xref>; <xref ref-type="bibr" rid="B57">Zheng et al., 2019</xref>). Autophagy in degeneration had been discussed in the liver, nervous system, and muscular disorders but rarely mentioned in tendon injury, especially in an enthesis tear, with chronicity worsening the degeneration (<xref ref-type="bibr" rid="B50">Wu et al., 2011</xref>). This article aims to review the literature works and to summarize the pathology of oxidative stress and unregulated autophagy in the rotator cuff enthesis correlated with chronicity. We aim to provide a clear mechanism potentially involved in the delayed enthesis healing of a chronic rotator cuff tear so that this review could be used as a reference for further study to improve healing through nonoperative or operative management. Literature works were retrieved from online resources, including PubMed, ScienceDirect, and Scopus, using appropriate keywords, in addition to the manually retrieved literature.</p>
</sec>
<sec id="s2">
<title>2 Mechanisms involved in a rotator cuff tear</title>
<sec id="s2-1">
<title>2.1 Chronicity of a rotator cuff tear</title>
<p>Time-dependent risks of tear enlargement have been demonstrated in the literature (<xref ref-type="bibr" rid="B16">Hebert-Davies et al., 2017</xref>; <xref ref-type="bibr" rid="B7">Codding and Keener, 2018</xref>). Patients with a rotator cuff tear left untreated for more than 24&#xa0;months had a higher re-tear rate (20%) than patients treated early with surgery (13%) (<xref ref-type="bibr" rid="B7">Codding and Keener, 2018</xref>). Cuff pathology would alter tissue quality and would impair tissue healing (<xref ref-type="bibr" rid="B40">Sambandam et al., 2015</xref>). A chronic rotator cuff tear will progress and degenerate, the reason why surgical repair is considered the early management in the course of the disease (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>; <xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>). The progression of a rotator cuff tear has the potential to increase the risk of tendon retraction, muscle atrophy, and fatty infiltration (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>; <xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>). In the investigation, symptom progression can be clinically observed as a possible sign of tear enlargement. Arthrography, ultrasound, and magnetic resonance imaging are used to evaluate tear progression and degeneration (<xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>; <xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>).</p>
<p>With greater progression involved in a chronic rotator cuff tear, greater kinematic tension is altered. When the tear achieves an 175&#xa0;mm<sup>2</sup> area threshold, the proximal humerus starts to migrate, producing further tension, mechanically pulling the tear, which contributes to tear progression (<xref ref-type="bibr" rid="B7">Codding and Keener, 2018</xref>). Muscle atrophy occurs as a complication of a chronic rotator cuff tear, which blunts the muscle capacity to produce force (<xref ref-type="bibr" rid="B57">Zheng et al., 2019</xref>). The muscle force of a chronic cuff tear had been studied in rats by <xref ref-type="bibr" rid="B9">Ditsios et al. (2014)</xref>. The muscle strength showed a significant reduction by 30% and 35% in muscle force in the supraspinatus muscle and infraspinatus muscle, respectively (<xref ref-type="bibr" rid="B9">Ditsios et al., 2014</xref>). The impaired tension and chronic overloading would eventually lead to degeneration, where soft tissues underwent fatty infiltration and atrophy (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). The angulation between muscle fibers is altered by retraction, allowing adhesions to occur. Loading alterations change the muscle structure, which may be induced by adhesions (<xref ref-type="bibr" rid="B40">Sambandam et al., 2015</xref>).</p>
<p>The pathology involved in a tear would eventually contribute to fatty infiltration, increased connective tissue content, and fibrosis, decreasing the elasticity, viability, and healing of the cuff (<xref ref-type="bibr" rid="B40">Sambandam et al., 2015</xref>). Fatty degeneration is significantly found more often in a symptomatic tear (35% vs<italic>.</italic> 4%), but supraspinatus muscle atrophy is found in both symptomatic (35%) and asymptomatic (12%) rotator cuff tears as shown in <xref ref-type="bibr" rid="B27">Kim et al. (2017)</xref>. Degeneration is influenced by age, as observed in many older patients (<xref ref-type="bibr" rid="B33">Narvani et al., 2020</xref>). <xref ref-type="bibr" rid="B9">Ditsios et al. (2014)</xref> studied the chronic rotator cuff tear in animal models by detaching rats&#x2019; supraspinatus and infraspinatus muscles in a procedure and harvesting the results after 12&#xa0;weeks and showed the histological characteristics. Fibrosis and adipose tissue proliferation in the endomysial tissue led to degeneration with muscle fiber separation and the loss of its original polygonal shape. Atrophic fibers surrounded by normal or hypertrophic fibers were also found, indicating denervation-type degeneration (<xref ref-type="bibr" rid="B9">Ditsios et al., 2014</xref>). Necrosis was also prominent, indicating the possibility of excessive protein degradation (<xref ref-type="bibr" rid="B9">Ditsios et al., 2014</xref>; <xref ref-type="bibr" rid="B57">Zheng et al., 2019</xref>).</p>
<p>It has been shown that progressive degenerative changes and tear enlargement have a significant association (<xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>; <xref ref-type="bibr" rid="B16">Hebert-Davies et al., 2017</xref>). <xref ref-type="bibr" rid="B25">Keener et al. (2015)</xref> found that a stable tear had, respectively, 4% and 9% supraspinatus and infraspinatus degeneration, which increased to 30% and 28% degeneration in shoulders with tear enlargement. Tears with degenerative transformation had a higher chance of progression (79% vs<italic>.</italic> 58%) according to <xref ref-type="bibr" rid="B16">Hebert-Davies et al. (2017)</xref>. Muscle degeneration was observed more frequently in a progressive tear with a 15.0&#xa0;mm baseline size. Progressive tissue degeneration involved in a tear lowers the tendon healing rate and renders irreparability after surgical management, and although it does not happen to all cases, this could lead to shoulder disability (<xref ref-type="bibr" rid="B10">Eljabu et al., 2015</xref>; <xref ref-type="bibr" rid="B25">Keener et al., 2015</xref>; <xref ref-type="bibr" rid="B32">Nakamura et al., 2015</xref>). Other studies have also correlated the increase in the rotator cuff tear size with fatty muscle infiltration (<xref ref-type="bibr" rid="B16">Hebert-Davies et al., 2017</xref>). The increasing size of a tear with fatty degeneration may be irreparable in time (<xref ref-type="bibr" rid="B33">Narvani et al., 2020</xref>). Further degeneration can complicate the tear into rotator cuff tear arthropathy with proximal humeral migration, acromial acetabularization, glenohumeral chondral loss, and bone loss (<xref ref-type="bibr" rid="B4">Chalmers et al., 2016</xref>).</p>
<p>Rotator cuff tears mostly occur in the bicep tendon (13&#x2013;17&#xa0;mm posterior). This area is the rotator crescent, with the rotator cable as its border, and it correlates with the junction of the infraspinatus and supraspinatus. The hypovascular nature of the rotator crescent may contribute to the degeneration of the rotator cuff tears (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). <xref ref-type="bibr" rid="B9">Ditsios et al. (2014)</xref> conducted an animal study using rat models and showed that the hypovascular tendon insertion of the atrophic chronic rotator cuff tear is the most frequent site for degeneration, fibrosis, and necrosis (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>).</p>
<p>Age, tear size, and degeneration are known to have a negative impact on healing (<xref ref-type="bibr" rid="B16">Hebert-Davies et al., 2017</xref>; <xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>; <xref ref-type="bibr" rid="B35">Oh et al., 2020</xref>). The healing rate was 95% for patients with age under 55&#xa0;years; however, it was 43% for patients with age above 65&#xa0;years (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). A tear greater than 2&#xa0;cm in size had a lower healing rate (65% vs<italic>.</italic> 89%) and higher re-tear rate compared to a tear less than 2&#xa0;cm in size (34.2% vs<italic>.</italic> 10.6%) (<xref ref-type="bibr" rid="B7">Codding and Keener, 2018</xref>; <xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). With the decreased muscle quality due to fatty infiltration and atrophy considered, <xref ref-type="bibr" rid="B53">Yamamoto et al. (2017)</xref> assumed that tears measuring 1&#x2013;3&#xa0;cm in length and 2&#x2013;3&#xa0;cm in width progress more than tears with other measurements. For high-grade, large, and massive tears, recurrent defects were found in 94% of shoulders examined (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). Between factors involved in healing impairment, a study found that age (&#x3e;65&#xa0;years) and tear size (13.0&#xa0;mm enrollment or 9.0&#xa0;mm enlargement) are correlated with degeneration (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>; <xref ref-type="bibr" rid="B20">Ichinose et al., 2021</xref>). Degenerative changes are linked to a poor clinical outcome and tendon healing, where acute injury tears without degeneration are more likely to heal than chronic degenerative tears (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). An infiltration larger than grade 2 in the Goutallier classification represents a turning point where the healing process becomes less consistent (<xref ref-type="bibr" rid="B16">Hebert-Davies et al., 2017</xref>; <xref ref-type="bibr" rid="B7">Codding and Keener, 2018</xref>; <xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). Studies have demonstrated fatty infiltration as an independent risk factor for recurrent tears and defects found after repair surgery (<xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). <xref ref-type="bibr" rid="B23">Jung W. et al. (2020)</xref> conducted a study where they found that the fatty degeneration of the supraspinatus muscle and muscle atrophy of the supraspinatus and infraspinatus muscles significantly affect tear progression, demonstrating difficult spontaneous healing. In muscle atrophy, the capacity for tendon healing is decreased. Retraction of the tear, besides causing tension and improper loading, also halts the healing process (<xref ref-type="bibr" rid="B42">Shin, 2012</xref>; <xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>; <xref ref-type="bibr" rid="B46">Tsuchiya et al., 2021</xref>).</p>
</sec>
<sec id="s2-2">
<title>2.2 Chronic rotator cuff tear and oxidative stress</title>
<p>Oxidative stress occurs in both acute and chronic tendon injuries. Reactive oxygen species (ROS) is significantly elevated in an injured tendon compared to a normal tendon as shown in an animal model (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Degeneration, as observed in a chronic rotator cuff tear, has a high chance to be influenced by damage caused by ROS (<xref ref-type="bibr" rid="B50">Wu et al., 2011</xref>; <xref ref-type="bibr" rid="B57">Zheng et al., 2019</xref>; <xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Oxidative stress degrades the tendon matrix because of matrix metalloproteinase-1 (MMP1) and causes metaplasia by impairing the differentiation of tendon-derived stem cells (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>).</p>
<p>ROS is continuously produced in an injured tendon. In time, excessive ROS with an inadequate balancing antioxidant will accumulate, which leads to oxidative stress. Synovial fluid ROS and superoxide-induced oxidative stress level are known to increase in the degenerated rotator cuff and recurrent tear. Hypoxia and metabolic factors are some of the factors that can initiate oxidative stress in the tendon tissue. Inflammation cytokines present in an injured tendon are regulated by oxidative stress, but some inflammation cytokines, such as IL-&#x3b2; and TNF-&#x3b1;, further induce the production of ROS in tenocytes through nicotinamide adenine dinucleotide phosphate (NADPH) oxidase (NOX). Oxidative stress-induced inflammation also contributes to alterations in vascularization and hypoxia (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>).</p>
<p>
<xref ref-type="bibr" rid="B48">Wen et al. (2016</xref>) used a rat skeletal muscle as a model for musculoskeletal injury and found that the levels of hypoxia-inducible factor (HIF) 1&#x3b1; and AMP-activated protein kinase (AMPK) &#x3b1;2, factors mediating hypoxia adaptation occurring in the injured muscle, elevated significantly at 12&#xa0;h, peaked at 2&#xa0;days, declined at 5&#xa0;days, and reached near the normal level at 15&#xa0;days. We thought that hypoxia plays an important role in the occurring pathways as a response to rotator cuff injury. The chronic overloading of the enthesis in PTRCTs and hypovascular nature of the proximal tendon insertion, different from other areas of tendons or muscles, will lead to prolonged hypoxia (<xref ref-type="bibr" rid="B9">Ditsios et al., 2014</xref>; <xref ref-type="bibr" rid="B26">Keener et al., 2019</xref>). In the hypoxic state, xanthine oxidase and NADPH will be activated and ROS production will occur, resulting in oxidative stress (<xref ref-type="bibr" rid="B21">Ji and Yeo, 2019</xref>). Tendon overloading generates cellular stress in tendon cells (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Regulation of genes related to ROS is highly influenced by mechanical loading. The plasma total oxidant status is elevated in tendon overuse (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Tendons are collagen-dense connective tissue that allows human body movements and serves as a force bridge between muscles and bones (<xref ref-type="bibr" rid="B31">Montagna et al., 2022</xref>). Collagen affected by mechanical stress would generate radicals that will migrate to the adjacent residue clusters and would settle as dihydroxyphenylalanine (DOPA), the oxidized form of tyrosine or phenylalanine residues. In the presence of water, DOPA would transform into hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) (<xref ref-type="fig" rid="F1">Figure 1</xref>) (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Superoxide anions produced by oxidation are mainly dismuted into H<sub>2</sub>O<sub>2</sub> by superoxide dismutase (SOD) in the mitochondria, the main source of ATP production by oxidative phosphorylation (OXPHOS), which generates ROS (<xref ref-type="bibr" rid="B6">Chevallier et al., 2020</xref>; <xref ref-type="bibr" rid="B28">Kim et al., 2020</xref>). Although the formation of DOPA and H<sub>2</sub>O<sub>2</sub> with scavenged radicals in collagen is considered a protective mechanism against oxidative stress, this oxidative stress inducer would cause oxidative damage, endoplasmic reticulum (ER) stress activation, tendon cell apoptosis, and matrix degradation through the induction of MMP1 mRNA expression if there is an excessive production of H<sub>2</sub>O<sub>2</sub> (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Through these mechanisms, oxidative stress seems to be occurring in rotator cuff tears.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>ROS formation due to mechanical stress. Collagen fibers when exposed to mechanical stress will break down into radicals and will migrate to adjacent residue clusters. In the clusters, tyrosine and phenylalanine amino acids are oxidized into DOPA. DOPA added with water transforms into H<sub>2</sub>O<sub>2</sub>, generating ROS and inducing oxidative stress. DOPA, dihydroxyphenylalanine; H<sub>2</sub>O<sub>2</sub>, hydrogen peroxide; ROS, reactive oxygen species.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g001.tif"/>
</fig>
</sec>
<sec id="s2-3">
<title>2.3 Oxidative stress and autophagy</title>
<p>ROS accumulation would induce autophagy as the regulator of cell oxidation (<xref ref-type="bibr" rid="B13">Gao, 2019</xref>). Oxidative stress in the enthesis leads to cell apoptosis, fibrosis, and degeneration. The expression of antioxidants, such as peroxiredoxin 5 in fibroblast and endothelial cells in tendons, provides protection from apoptosis and cell function loss. Oxidative stress may induce apoptosis and tendon matrix degradation. Antioxidant deficiency in mice shows enthesis degeneration, which supports the involvement of oxidative stress in tendon degeneration (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Mitochondria accommodate changes caused by imbalanced ROS and antioxidants by mitophagy (<xref ref-type="bibr" rid="B21">Ji and Yeo, 2019</xref>). With hypoxia, a factor that could initiate oxidative stress, autophagy flux increases. <xref ref-type="bibr" rid="B5">Chen et al. (2017)</xref> conducted a study on mouse C2C12 myotube cells treated with cobalt chloride to induce autophagy. They found a significant increase in LC3II, a marker for autophagosomes, and a decrease in p62, an autophagic adapter protein degraded during increased autophagy (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>; <xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>; <xref ref-type="bibr" rid="B39">Runwal et al., 2019</xref>). The elevated autophagic activity could be initiated excessively in rotator cuff tears, leading to tissue destruction, which may be pathologic. Autophagy could be initiated by HIF-1, the mammalian target of rapamycin (mTOR), and UPR mechanisms (<xref ref-type="bibr" rid="B11">Fang et al., 2015</xref>).</p>
</sec>
<sec id="s2-4">
<title>2.4 HIF-1-mediated autophagy</title>
<p>HIFs with an &#x3b1;-subunit in normoxia is inhibited by proline hydroxylase (PHD), leading to post-translational modification and proteasomal degradation (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>; <xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>). The subunit is also degraded by pVHL through ubiquitinylation (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>). At the transcription stage, it is inhibited by factor-inhibiting HIF (FIH). During a hypoxic state, post-translational modification is inhibited, resulting in an &#x3b1;-subunit and transcriptionally active heterocomplex HIF-&#x3b1;&#x3b2; accumulation (<xref ref-type="fig" rid="F2">Figure 2</xref>). The activated HIF decreases ROS production. The activated mechanisms are decreased protein production, mitophagy, and autophagy to minimize ATP needs, which utilizes oxidative phosphorylation rather than a nonoxidative mechanism in hypoxic-state ATP production (<xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>). HIF-1&#x3b1; also regulates phagocytosis and mononuclear cells, which are important in inflammation (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>HIF activation. ROS creates oxidative stress and induces inflammation. Inflammation would alter vascularization and, together with the hypovascularity of the enthesis, would create hypoxia. Hypoxia inhibits PHD and FIH activity in degrading HIF&#x3b1;. The accumulation of HIF&#x3b1; added with HIF&#x3b2; creates an HIF&#x3b1;&#x3b2; heterocomplex, the activated form of HIF. To limit ATP production and, therefore, ROS production, autophagy is initiated with a limitation in protein and lipid formation. Activated HIF also contributes to inflammation by regulating phagocytosis and mononuclear cells. ROS, reactive oxygen species; PHD, proline hydroxylase; FIH, factor-inhibiting HIF; HIF, hypoxia-inducible factor.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g002.tif"/>
</fig>
<p>The autophagy mechanism is induced in hypoxia (<xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>; <xref ref-type="bibr" rid="B47">Wang et al., 2018</xref>). Wang et al. found that in the musculoskeletal field, beclin-1, involved in autophagy initiation, increases during hypoxia in stem cells derived from rat genioglossus muscles. Autophagosome vacuoles with cytoplasmic organelles and vesicles inside were observed to be significantly increased in hypoxia. The induction of autophagy in hypoxia mostly involves the HIF-1&#x3b1;/Bcl-2 adenovirus E1B 19-kDa interacting protein (BNIP) 3 signaling pathway (<xref ref-type="fig" rid="F3">Figure 3</xref>). Hypoxia-induced autophagy was thought to have removed mitochondria for ROS over-accumulation prevention, but it is now known to cause autophagic cell death (<xref ref-type="bibr" rid="B55">Zhang et al., 2018</xref>). <xref ref-type="bibr" rid="B5">Chen et al. (2017)</xref> also found that HIF-1&#x3b1;, BNIP3, and beclin-1 are upregulated in hypoxia-induced autophagy. Similar results for HIF-1&#x3b1; and BNIP3 were found in <xref ref-type="bibr" rid="B44">Song et al. (2012)</xref> in human periodontal ligament cells. HIF-1 initiates the transcription of BNIP3 and BNIP3L, which interact with Bcl-2 and Bcl-xL, inhibiting their bond with Vps34 and releasing beclin-1, resulting in autophagy induction (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>; <xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>; <xref ref-type="bibr" rid="B55">Zhang et al., 2018</xref>). Therefore, besides its role in maintaining homeostasis, HIF-1 can potentially over-activate autophagy through beclin-1.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Autophagy initiation by HIF-1. The activation of HIF-1 by ROS induces BNIP3 and BNIP3L transcription. BNIP3 and BNIP3L interact with Bcl-2 and Bcl-xL, respectively, inhibiting their binding with beclin-1. The free beclin-1 initiates the autophagy mechanism. ROS, reactive oxygen species; HIF, hypoxia-inducible factor; BNIP, Bcl-2 adenovirus E1B 19-kDa interacting protein.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g003.tif"/>
</fig>
</sec>
<sec id="s2-5">
<title>2.5 mTOR pathway-mediated autophagy</title>
<p>Oxidative stress removes mTOR from the induction complex, causing phosphorylation (<xref ref-type="fig" rid="F4">Figure 4</xref>). The activation of the mTOR pathway by phosphorylation initiates autophagy. <xref ref-type="bibr" rid="B52">Xu et al. (2020)</xref> found an elevation of LC3 in the activation of the mTOR pathway. Energy production is limited in the hypoxic state to retain ROS production (<xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>). Nutrient scarcity would initiate AMPK to interact with the unc-51-like autophagy-activating kinase 1 (ULK1) complex. The interaction would cause phosphorylation and mTOR separation. The dissociation of mTOR from the ULK1 complex enables ULK1 to trigger the translation of autophagosomes (<xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>). Therefore, the phosphorylation of the complex downregulates mTOR, as shown in Zheng et al., where the injection of an mTOR inhibitor to rat supraspinatus results in increased amounts of autophagosomes and autophagolysosomes. <xref ref-type="bibr" rid="B5">Chen et al. (2017)</xref> also measured the levels of p-mTOR/mTOR and p-AMPK&#x3b1;/AMPK&#x3b1; and found their decreased and increased levels, respectively, in hypoxia-induced autophagy, confirming their roles in autophagy.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>mTOR pathway activation. ROS produced after the injury and produced because of hypoxia will generate a cellular response to produce less ATP to limit ROS as its residual product. Low ATP and hypoxia create nutrient scarcity in the cell and initiate AMPK to interact with the ULK1 complex, causing phosphorylation. Phosphorylation and separation of mTOR from the induction complex initiate autophagy. ROS, reactive oxygen species; AMPK, AMP-activated protein kinase; ULK1, unc-51-like autophagy-activating kinase 1; mTOR, mammalian target of rapamycin.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g004.tif"/>
</fig>
<p>Oxidative stress and overloading activate mTOR complex 1 (mTORC1). The signaling pathway of mTOR when mTOR is downregulated is associated with metaplasia, fatty infiltration, and muscle atrophy (<xref ref-type="bibr" rid="B21">Ji and Yeo, 2019</xref>; <xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). The mTOR pathway reduces protein synthesis and induces autophagy, similar to that of HIF (<xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>). Conversely, <xref ref-type="bibr" rid="B51">Xie et al. (2019)</xref> used <italic>Caenorhabditis elegans</italic> and found that the signaling of mTORC1 negatively affects eukaryotic elongation factor 2 kinase (eEF2K), causing reduced inactivation by the phosphorylation of eEF2 needed for ribosome movement along the mRNA, which enhances the accuracy of protein synthesis, instead of affecting the quantity of protein production.</p>
</sec>
<sec id="s2-6">
<title>2.6 UPR-mediated autophagy</title>
<p>The cellular response during hypoxia maintains survival under the unstable condition and restores oxygen homeostasis. A metabolic switch happens because of HIF activation, and other cellular responses would eventually disrupt cellular homeostasis. ATP limitation, as mentioned in the previous section, reduces protein and lipid synthesis, disturbs protein folding in the formation of a disulfide bond, and increases ROS (<xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>).</p>
<p>ROS from its main source, mitochondria, enters the ER through mitochondrial-associated membranes or diffuses as a part of redox homeostasis. Redox modifications of autophagy components have been reported to affect the induction of autophagy, alter ER redox homeostasis, and initiate autophagy. In the ER itself, NOX4 in the ER membrane acts as a catalyst of ROS production. Oxidative protein folding is one of the sources of H<sub>2</sub>O<sub>2</sub> in the ER (<xref ref-type="bibr" rid="B56">Zhang et al., 2019</xref>). The overproduction of H<sub>2</sub>O<sub>2</sub>, an oxidative stress inducer involved in a chronic rotator cuff tear, would cause ER stress (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Some proteins are expressed higher in a rotator cuff tear. A few of those proteins are matrix-degrading enzymes, pro-MMP1 protein, a protein involved in inflammatory response (S100A11), a protein needed for lipid droplet formation (PLIN4), and a protective ER protein produced in the hypoxic state (HYOU1) (<xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Intracellular homeostasis alterations and extracellular stimuli cause protein misfolding (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>). ROS would affect the redox environment, which disrupts the proteins that enter ER for proper protein folding. Under normal conditions, the misfolded proteins are degraded via the ubiquitin&#x2013;proteasome system (UPS) (<xref ref-type="bibr" rid="B54">Zeeshan et al., 2016</xref>). ROS with ER stress aggregates small protein and impair the UPS, thus needing autophagy activation for misfolded protein elimination (<xref ref-type="bibr" rid="B54">Zeeshan et al., 2016</xref>; <xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>). An elevation in protein secretion or protein folding disruption would create ER stress (<xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>). Protein folding and maturation are processed in the ER, assisted by compartment-specific molecular chaperones. Proteostasis (protein homeostasis) is maintained by cells by adjusting the complement of chaperones to match the amount of protein synthesized. Failure in the chaperones to balance the protein synthesis load will cause excess non-native ER clients (ER stress), causing proteotoxic misfolding and aggregate formation (<xref ref-type="bibr" rid="B38">Preissler and Ron, 2019</xref>; <xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>). The increase in protein synthesis would cause a necessary elevation of disulfide bond formation in the ER, involving electron shuttle through ER oxidoreductin (ERO) 1&#x3b1; oxidation, exchanging the disulfide bond with protein disulfide isomerase (PDI) where H<sub>2</sub>O<sub>2</sub> is generated, causing further ER stress, oxidative stress, protein oxidation, and overloaded misfolded protein, leading to UPR activation (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>; <xref ref-type="bibr" rid="B6">Chevallier et al., 2020</xref>). Calcium signaling by ERO1&#x3b1; induces oxidative stress, especially in the mitochondria, and ROS production (<xref ref-type="bibr" rid="B6">Chevallier et al., 2020</xref>). A cycle of pathway can be occurring from the increased protein synthesis in response to rotator cuff injury combined with oxidative stress, causing ER stress, which leads to protein misfolding that activates UPR and results in further oxidative stress.</p>
<p>ER stress would activate a series of adaptive mechanisms called UPR to cope with the alterations of protein folding (<xref ref-type="fig" rid="F5">Figure 5</xref>). Information regarding the protein folding status is delivered to the nucleus and cytosol via UPR. UPR in vertebrates is a complex signaling pathway with multiple cellular responses mediated by the following three known major stress sensors: inositol-requiring protein 1 (IRE1) &#x3b1; and &#x3b2;, ATF6 &#x3b1; and &#x3b2;, and protein kinase RNA-like ER kinase (PERK) (<xref ref-type="bibr" rid="B18">Hetz, 2012</xref>; <xref ref-type="bibr" rid="B38">Preissler and Ron, 2019</xref>; <xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>). The stress-sensing luminal domain (LD) of inactivated IRE1 is bound with binding immunoglobulin protein (BiP), an ER quality control molecule and chaperone. BiP in ER stress would release itself from the LD bond, activating UPR, and bind with unfolded proteins to regulate folding and degradation (<xref ref-type="bibr" rid="B38">Preissler and Ron, 2019</xref>). Although demonstrated in &#x3b2;-cells in <xref ref-type="bibr" rid="B45">Sowers et al. (2018)</xref>, PERK and ATF6 activated in ER stress would stimulate chaperone expression such as BiP, protein disulfide isomerase (PDI), and ERp72. The activation of the response would lead to protein synthesis attenuation through translation inhibition, mRNA decay, and autophagy. If ER stress becomes irreversible, the pathway removes damaged cells by apoptosis (<xref ref-type="bibr" rid="B18">Hetz, 2012</xref>; <xref ref-type="bibr" rid="B38">Preissler and Ron, 2019</xref>; <xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>UPR activation. ROS enters the ER and causes ER stress. ER stress would create ROS inside the ER and <italic>vice versa</italic>. Inflammation induced by ROS increases protein synthesis to produce proinflammatory proteins. ER stress releases BiP from the luminal domain of the stress sensors (PERK, IRE1&#x3b1;, and ATF6). Once activated, ATF6 and PERK stimulate chaperone (BiP, ERp72, and PDI) expression. The chaperones will remove proteins, further inducing protein synthesis. The increased protein synthesis causes impairment in protein folding and produces misfolded proteins. The misfolded proteins create more ER stress and <italic>vice versa</italic>. The activated PERK phosphorylated eIF2&#x3b1; that supports ATF4 translation. ATF4 mediates and, therefore, increases protein synthesis. IRE1&#x3b1; activation results in the initiation of IRE1&#x3b1;-JUN N-terminal kinase (JNK) signaling, which activates beclin-1. ATF4 and beclin-1 trigger the autophagy-lysosomal pathway, creating autophagosomes, causing autophagy and even cell death. ROS, reactive oxygen species; ER, endoplasmic reticulum; BiP, binding immunoglobulin protein; PERK, protein kinase RNA-like ER kinase; IRE1&#x3b1;, inositol-requiring protein; ATF, activating transcription factor; PDI, protein disulfide isomerase; JNK, JUN N-terminal kinase.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g005.tif"/>
</fig>
<p>Macroautophagy is one of the responses of the UPR pathway to eliminate unfolded proteins (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>; <xref ref-type="bibr" rid="B43">Smith, 2018</xref>; <xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>). This bulk degradation mechanism involving the lysosomal pathway eliminates aggregation of abnormal protein and damaged ER (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>). The mechanism is signaled by IRE1&#x3b1; and PERK. PERK activated by ER stress through dimerization, oligomerization, and autophosphorylation results in eukaryotic translation initiator factor 2&#x3b1; (eIF2&#x3b1;) phosphorylation, which translates mRNA encoding ATF4. ATF4 controls the prosurvival gene level related to autophagy by binding to the proximal promoter region of its target genes (<xref ref-type="bibr" rid="B18">Hetz, 2012</xref>; <xref ref-type="bibr" rid="B15">Han et al., 2013</xref>). In addition, ATF4 target genes include <italic>Atf2</italic>, <italic>Gadd34</italic>, <italic>Trib3</italic>, <italic>Wars</italic>, and aminoacyl tRNA synthetases. The target gene <italic>Gadd34/Ppp1r15a</italic> regulates protein phosphatase 1 (PP1), causing feedback for eIF2&#x3b1; dephosphorylation. However, most ATF4 target genes are involved in protein synthesis (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>; <xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>). Protein synthesis mediated by ATF4 is enhanced by CHOP, expressed because of eIF2&#x3b1; phosphorylation and ATF6f induction (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>; <xref ref-type="bibr" rid="B1">Bartoszewska and Collawn, 2020</xref>). The activation of ATF4 and CHOP further increases protein synthesis. In the uncorrected ER stress, these proteins would be misfolded (<xref ref-type="bibr" rid="B15">Han et al., 2013</xref>). ATF6 that regulates transcription of ER chaperones and enzymes promoting ER protein regulation is ATF6P50, the fragment released from full length ATF6p90 by cleavage in site-1 protease (S1P) and site-2-protease (S2P) to release basic leucine zipper (bZIP) transcription factor-containing fragments (<xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>).</p>
<p>IRE1&#x3b1; is originally repressed by binding to BiP (GRP78 or HSPA5). During ER stress, the BiP bond with IRE1&#x3b1; is separated because of its preferential binding with the misfolded protein, allowing IRE1&#x3b1; phosphorylation, dimerization, and cluster formation. High stress would enlarge the cluster, but prolonged ER stress would result in cluster dissociation and attenuated activity. Through ER stress-activated IRE1&#x3b1;, the adapter protein TNFR-associated factor 2 (TRAF2) is recruited (<xref ref-type="bibr" rid="B18">Hetz, 2012</xref>). JUN N-terminal kinase (JNK) is one of the targets of TRAF2, mediating IRE1&#x3b1;-JNK signaling. The signaling pathway would activate beclin-1 (autophagy regulator) and would trigger autophagy (<xref ref-type="bibr" rid="B18">Hetz, 2012</xref>; <xref ref-type="bibr" rid="B43">Smith, 2018</xref>). IRE1&#x3b1; binds to protein receptor optineurin, which functions in activating autophagy for mitochondria (mitophagy) observed in neuron cells and controlling the stability of IRE1&#x3b1; (<xref ref-type="bibr" rid="B49">Wong and Holzbaur, 2014</xref>; <xref ref-type="bibr" rid="B17">Hetz et al., 2020</xref>).</p>
</sec>
<sec id="s2-7">
<title>2.7 Oxidative stress-induced autophagy in a chronic rotator cuff tear</title>
<p>An over-elevated ROS level, as observed in chronic rotator cuff injuries, could result in uncontrolled and unregulated autophagy (<xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>). <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea (2021)</xref> found increased LC3I conversion to LC3II and p62 protein expression in rat soleus and plantaris muscles 8 and 14&#xa0;days after tenotomy. Autophagy under normal conditions removes or recycles proteins and organelles to maintain homeostasis at the cellular level (<xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>). The cellular defense mechanism against oxidative stress is available through the autophagy-lysosomal pathway. Normally, the autophagy mechanism selectively removes damaged proteins and organelles (<xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>; <xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Autophagy is &#x201c;self-eating,&#x201d; a normal mechanism of tissue repair or conversion to energy needed for the repair (<xref ref-type="bibr" rid="B47">Wang et al., 2018</xref>). Autophagy helps in balancing synthesis and degradation (<xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>). However, excessive mechanisms will degenerate the tendon, resulting in an abnormal state (<xref ref-type="fig" rid="F6">Figure 6</xref>) (<xref ref-type="bibr" rid="B50">Wu et al., 2011</xref>; <xref ref-type="bibr" rid="B44">Song et al., 2012</xref>; <xref ref-type="bibr" rid="B22">Joshi et al., 2014</xref>; <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea, 2021</xref>). The imbalance and overstimulated, therefore unregulated, autophagy is increased under a catabolic condition, as observed in the hypoxic enthesis tear where energy production is switched to glycolysis due to ROS and HIF-1&#x3b1; (<xref ref-type="bibr" rid="B3">Calejo et al., 2021</xref>; <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea, 2021</xref>). <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea (2021)</xref> applied heat stress to their subjects to create an anabolic condition and confirmed the presence of an imbalanced autophagy-lysosomal pathway.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Rotator cuff degeneration by autophagy. ApoE, apolipoprotein E; ER, endoplasmic reticulum; PC1, type 1 procollagen.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g006.tif"/>
</fig>
<p>Chronicity complicates the rotator cuff tear, mostly manifesting as muscle atrophy (<xref ref-type="bibr" rid="B57">Zheng et al., 2019</xref>). The loss of skeletal mass or muscle wasting has been reported to involve autophagy (<xref ref-type="bibr" rid="B22">Joshi et al., 2014</xref>; <xref ref-type="bibr" rid="B5">Chen et al., 2017</xref>). Currently, among all members of the autophagy-lysosome system, macroautophagy is the only member known to be involved in muscle atrophy (<xref ref-type="bibr" rid="B21">Ji and Yeo, 2019</xref>). Enhanced protein degradation and diminished protein synthesis are the hallmarks of atrophy (<xref ref-type="bibr" rid="B57">Zheng et al., 2019</xref>). The autophagy mechanism is fundamental to several tissues to control degradation and recycle cellular components engulfed in autophagosome vesicles. It is an early cellular response to stress. Selective ER autophagy (ER-phagy) controls type 1 procollagen (PC1) secretion, a precursor for type 1 collagen (COL1), the major component of the tendon extracellular matrix. <xref ref-type="bibr" rid="B31">Montagna et al. (2022</xref>) conducted a study using human gracilis tendons and murine Achilles tendons and showed that the PC1 level is reduced in the presence of autophagosomes and increased when inhibition is performed. With misfolded PC1 aggregation, the rise and fall of the PC1 level affected by autophagosome presence were even more prominent. These indicated that autophagy eliminates PC1, especially if it was misfolded. Tendon tissue with autophagy induction showed downregulated expression of the <italic>COL1A1</italic> gene, irregular collagen fibrils, and significantly reduced mechanical strength (both in maximum stress and strain). Muscle atrophy is known to have tissue fibrosis and cellular apoptosis involvements (<xref ref-type="bibr" rid="B23">Jung et al., 2020a</xref>; <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea, 2021</xref>). Autophagy may cause cell death and may trigger apoptosis, resulting in autophagy-mediated cell death (ACD) (<xref ref-type="bibr" rid="B24">Jung et al., 2020b</xref>). <xref ref-type="bibr" rid="B50">Wu et al. (2011)</xref> showed increased ACD in a chronic rotator cuff tendon tear with histologically moderate changes (grade 2) when compared to a normal tendon (grade 0) and a tendon with slight changes (grade 1). However, in a tendon with the total loss of fiber structure (grade 3), ACD was decreased compared with a tendon with moderate changes. Meanwhile, myofibroblast percentage was elevated with the worse tendon tissue changes as an attempt to revive tendon integrity. With persistent overload and malnutrition, as in a chronic condition and hypoxia, ACD may surpass cell migration and proliferation, causing cell scarcity and reduction in cell density (<xref ref-type="bibr" rid="B50">Wu et al., 2011</xref>). Protein elimination, organelle removal, and ACD would shrink and reduce muscle fibers, resulting in atrophy (<xref ref-type="bibr" rid="B50">Wu et al., 2011</xref>; <xref ref-type="bibr" rid="B2">Bonaldo and Sandri, 2013</xref>; <xref ref-type="bibr" rid="B19">Hirunsai and Srikuea, 2021</xref>). This has been confirmed in <xref ref-type="bibr" rid="B22">Joshi et al. (2014)</xref> by finding the upregulation of LC3II with autophagy as the major degradation process in an atrophic rat supraspinatus model.</p>
<p>Inflammation initiated by ROS and HIF-1&#x3b1; could directly lead to structural changes in tendons (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>; <xref ref-type="bibr" rid="B30">Lui et al., 2022</xref>). Proinflammatory cytokines, such as IL-1&#x3b2; and MMP-8 (collagenase 2), play roles in tissue destruction. IL-1&#x3b2; induces fibroblasts to produce collagenase and stromelysin or other destructive metalloproteinases (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>). Collagenase 2 degrades COL1, the major component of the enthesis (<xref ref-type="bibr" rid="B44">Song et al., 2012</xref>; <xref ref-type="bibr" rid="B31">Montagna et al., 2022</xref>). Inflammation helps in developing fatty infiltration and muscle atrophy post injury in a rotator cuff, leading to tear worsening. Anti-inflammation treatment is known to reduce fatty infiltration and fibrosis, improving muscle strength up to twofold in load to failure, and increase healing in the repaired enthesis, as observed in studies using animal models. Autophagy activity has been observed in a degenerated tendon, causing fatty infiltration (<xref ref-type="bibr" rid="B14">Gumucio et al., 2012</xref>; <xref ref-type="bibr" rid="B34">Oak et al., 2014</xref>). <xref ref-type="bibr" rid="B14">Gumucio et al. (2012)</xref> demonstrated the expression of Vps34 and beclin-1 in torn rat rotator cuffs with lipid accumulations, suggesting the involvement of autophagocytic pathways in the chronic rotator cuff tear. Autophagy collects intracellular lipid in atherosclerotic plaque regulated by macrophages. The macrophages then differentiate into foam cells expressing apolipoprotein E (ApoE), a major component of very-low-density lipoproteins and chylomicron particles, and CIDEC, a cell death-inducing DFF45-like effector (CIDE) protein (<xref ref-type="bibr" rid="B14">Gumucio et al., 2012</xref>; <xref ref-type="bibr" rid="B12">Gao et al., 2017</xref>). Both ApoE and CIDEC form lipid droplets involved in fat metabolism (<xref ref-type="bibr" rid="B14">Gumucio et al., 2012</xref>).</p>
<p>Treatments such as rotator cuff repair and postoperative rehabilitations are performed to anatomically and mechanically return the torn rotator cuff into its original state, reducing further strain and stress to allow tissue healing (<xref ref-type="bibr" rid="B41">Sgroi and Cilenti, 2018</xref>). In the enthesis, regenerative engineering by administering local biological therapeutics has been cultivated using biodegradable synthetic polymers as a potential treatment to improve postoperative enthesis-healing quality (<xref ref-type="bibr" rid="B36">Prabhath et al., 2021</xref>). With this review, it is revealed that ROS plays an important role in activating excessive autophagy in the torn rotator cuff, which causes tissue damage and degeneration, restricting proper healing. Detailed research can be conducted to further confirm the autophagy-related mechanisms occurring in the torn rotator cuff. Biological interventions reducing ROS formation, oxidative stress, and autophagic activity could be considered to allow better tissue healing in the rotator cuff tear (<xref ref-type="fig" rid="F7">Figure 7</xref>).</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Potential mechanism in impaired enthesis tissue healing mediated by oxidative stress-induced autophagy. Flat-ended line, intervention; mTOR, mammalian target of rapamycin; UPR, unfolded protein response; HIF, hypoxia-inducible factor.</p>
</caption>
<graphic xlink:href="fphys-14-1222099-g007.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="conclusion" id="s3">
<title>3 Conclusion</title>
<p>Oxidative stress occurring in a hypovascularized chronic rotator cuff tear due to hypoxia and ROS accumulation would result in unregulated autophagy directly or autophagy mediated by HIF-1, mTOR, and UPR. These mechanisms, leading to autophagy in the enthesis if occurring chronically, would cause degenerative changes such as denervation degeneration and fatty degeneration. These would lead to disrupted enthesis healing and tear progression, complicating repair with a high risk of re-tear. The cascades explained were a potential contributor to the high recurrent rate of the rotator cuff enthesis tear. Unregulated excessive autophagy caused by oxidative stress, which results in tissue degeneration and potentially produces pathological tissue, should be accounted for future studies regarding rotator cuff tears. Therefore, further research is required for better understanding, and biological interventions can be considered in addition to surgical repair to enhance tissue healing.</p>
</sec>
</body>
<back>
<sec id="s4">
<title>Author contributions</title>
<p>RP contributed to conceptualization, methodology, writing, draft preparation, review, and editing. SP contributed to writing, draft preparation, visualization, review, and editing. RP, HH, BC, and HR contributed to review and editing. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec sec-type="COI-statement" id="s5">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s6">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bartoszewska</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Collawn</surname>
<given-names>J. F.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Unfolded protein response (UPR) integrated signaling networks determine cell fate during hypoxia</article-title>. <source>Cell. Mol. Biol. Lett.</source> <volume>25</volume> (<issue>1</issue>), <fpage>18</fpage>. <pub-id pub-id-type="doi">10.1186/s11658-020-00212-1</pub-id>
</citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bonaldo</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Sandri</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Cellular and molecular mechanisms of muscle atrophy</article-title>. <source>Dis. Model. Mech.</source> <volume>6</volume> (<issue>1</issue>), <fpage>25</fpage>&#x2013;<lpage>39</lpage>. <pub-id pub-id-type="doi">10.1242/dmm.010389</pub-id>
</citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Calejo</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Costa-Almeida</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Reis</surname>
<given-names>R. L.</given-names>
</name>
<name>
<surname>Gomes</surname>
<given-names>M. E.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>
<italic>In vitro</italic> temporal HIF-mediated deposition of osteochondrogenic matrix governed by hypoxia and osteogenic factors synergy</article-title>. <source>J. Cell. Physiol.</source> <volume>236</volume> (<issue>5</issue>), <fpage>3991</fpage>&#x2013;<lpage>4007</lpage>. <pub-id pub-id-type="doi">10.1002/jcp.30138</pub-id>
</citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chalmers</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Salazar</surname>
<given-names>D. H.</given-names>
</name>
<name>
<surname>Steger-May</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Chamberlain</surname>
<given-names>A. M.</given-names>
</name>
<name>
<surname>Stobbs-Cucchi</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Yamaguchi</surname>
<given-names>K.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Radiographic progression of arthritic changes in shoulders with degenerative rotator cuff tears</article-title>. <source>J. Shoulder Elb. Surg.</source> <volume>25</volume> (<issue>11</issue>), <fpage>1749</fpage>&#x2013;<lpage>1755</lpage>. <pub-id pub-id-type="doi">10.1016/j.jse.2016.07.022</pub-id>
</citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>She</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Effects of cobalt chloride, a hypoxia-mimetic agent, on autophagy and atrophy in skeletal C2C12 myotubes</article-title>. <source>BioMed Res. Int.</source> <volume>2017</volume>, <fpage>7097580</fpage>. <pub-id pub-id-type="doi">10.1155/2017/7097580</pub-id>
</citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chevallier</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Andersen</surname>
<given-names>M. R.</given-names>
</name>
<name>
<surname>Malphettes</surname>
<given-names>L.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Oxidative stress&#x2010;alleviating strategies to improve recombinant protein production in CHO cells</article-title>. <source>Biotechnol. Bioeng.</source> <volume>117</volume> (<issue>4</issue>), <fpage>1172</fpage>&#x2013;<lpage>1186</lpage>. <pub-id pub-id-type="doi">10.1002/bit.27247</pub-id>
</citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Codding</surname>
<given-names>J. L.</given-names>
</name>
<name>
<surname>Keener</surname>
<given-names>J. D.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Natural history of degenerative rotator cuff tears</article-title>. <source>Curr. Rev. Musculoskelet. Med.</source> <volume>11</volume> (<issue>1</issue>), <fpage>77</fpage>&#x2013;<lpage>85</lpage>. <pub-id pub-id-type="doi">10.1007/s12178-018-9461-8</pub-id>
</citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Deniz</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Kose</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Tugay</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Guler</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Turan</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Fatty degeneration and atrophy of the rotator cuff muscles after arthroscopic repair: does it improve, halt or deteriorate?</article-title> <source>Arch. Orthop. Trauma Surg.</source> <volume>134</volume>, <fpage>985</fpage>&#x2013;<lpage>990</lpage>. <pub-id pub-id-type="doi">10.1007/s00402-014-2009-5</pub-id>
</citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ditsios</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Boutsiadis</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kapoukranidou</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Chatzisotiriou</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kalpidis</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Albani</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2014</year>). <article-title>Chronic massive rotator cuff tear in rats: <italic>in vivo</italic> evaluation of muscle force and three-dimensional histologic analysis</article-title>. <source>J. Shoulder Elb. Surg.</source> <volume>23</volume> (<issue>12</issue>), <fpage>1822</fpage>&#x2013;<lpage>1830</lpage>. <pub-id pub-id-type="doi">10.1016/j.jse.2014.04.016</pub-id>
</citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Eljabu</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Klinger</surname>
<given-names>H. M.</given-names>
</name>
<name>
<surname>von Knoch</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>The natural history of rotator cuff tears: A systematic review</article-title>. <source>Arch. Orthop. Trauma Surg.</source> <volume>135</volume> (<issue>8</issue>), <fpage>1055</fpage>&#x2013;<lpage>1061</lpage>. <pub-id pub-id-type="doi">10.1007/s00402-015-2239-1</pub-id>
</citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Tan</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Q.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Signaling pathways and mechanisms of hypoxia-induced autophagy in the animal cells</article-title>. <source>Cell. Biol. Int.</source> <volume>39</volume> (<issue>8</issue>), <fpage>891</fpage>&#x2013;<lpage>898</lpage>. <pub-id pub-id-type="doi">10.1002/cbin.10463</pub-id>
</citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gao</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>F. J.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Su</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>L.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Control of lipid droplet fusion and growth by CIDE family proteins</article-title>. <source>Biochim. Biophys. Acta Mol. Cell. Biol. Lipids</source> <volume>1862</volume> (<issue>10</issue>), <fpage>1197</fpage>&#x2013;<lpage>1204</lpage>. <pub-id pub-id-type="doi">10.1016/j.bbalip.2017.06.009</pub-id>
</citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gao</surname>
<given-names>Q.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Oxidative stress and autophagy</article-title>. <source>Autophagy Biol. Dis.</source> <volume>1206</volume>, <fpage>179</fpage>&#x2013;<lpage>198</lpage>. <pub-id pub-id-type="doi">10.1007/978-981-15-0602-4_9</pub-id>
</citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gumucio</surname>
<given-names>J. P.</given-names>
</name>
<name>
<surname>Davis</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Bradley</surname>
<given-names>J. R.</given-names>
</name>
<name>
<surname>Stafford</surname>
<given-names>P. L.</given-names>
</name>
<name>
<surname>Schiffman</surname>
<given-names>C. J.</given-names>
</name>
<name>
<surname>Lynch</surname>
<given-names>E. B.</given-names>
</name>
<etal/>
</person-group> (<year>2012</year>). <article-title>Rotator cuff tear reduces muscle fiber specific force production and induces macrophage accumulation and autophagy</article-title>. <source>J. Orthop. Res.</source> <volume>30</volume> (<issue>12</issue>), <fpage>1963</fpage>&#x2013;<lpage>1970</lpage>. <pub-id pub-id-type="doi">10.1002/jor.22168</pub-id>
</citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Han</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Back</surname>
<given-names>S. H.</given-names>
</name>
<name>
<surname>Hur</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>Y-H.</given-names>
</name>
<name>
<surname>Gildersleeve</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Shan</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2013</year>). <article-title>ER-stress-induced transcriptional regulation increases protein synthesis leading to cell death</article-title>. <source>Nat. Cell. Biol.</source> <volume>15</volume> (<issue>5</issue>), <fpage>481</fpage>&#x2013;<lpage>490</lpage>. <pub-id pub-id-type="doi">10.1038/ncb2738</pub-id>
</citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hebert-Davies</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Teefey</surname>
<given-names>S. A.</given-names>
</name>
<name>
<surname>Steger-May</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Chamberlain</surname>
<given-names>A. M.</given-names>
</name>
<name>
<surname>Middleton</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Robinson</surname>
<given-names>K.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Progression of fatty muscle degeneration in atraumatic rotator cuff tears</article-title>. <source>J. Bone Jt. Surg. Am.</source> <volume>99</volume> (<issue>10</issue>), <fpage>832</fpage>&#x2013;<lpage>839</lpage>. <pub-id pub-id-type="doi">10.2106/JBJS.16.00030</pub-id>
</citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hetz</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Kaufman</surname>
<given-names>R. J.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Mechanisms, regulation and functions of the unfolded protein response</article-title>. <source>Nat. Rev. Mol. Cell. Biol.</source> <volume>21</volume> (<issue>8</issue>), <fpage>421</fpage>&#x2013;<lpage>438</lpage>. <pub-id pub-id-type="doi">10.1038/s41580-020-0250-z</pub-id>
</citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hetz</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>The unfolded protein response: controlling cell fate decisions under ER stress and beyond</article-title>. <source>Nat. Rev. Mol. Cell. Biol.</source> <volume>13</volume> (<issue>2</issue>), <fpage>89</fpage>&#x2013;<lpage>102</lpage>. <pub-id pub-id-type="doi">10.1038/nrm3270</pub-id>
</citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hirunsai</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Srikuea</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Autophagy-lysosomal signaling responses to heat stress in tenotomy-induced rat skeletal muscle atrophy</article-title>. <source>Life Sci.</source> <volume>275</volume>, <fpage>119352</fpage>. <pub-id pub-id-type="doi">10.1016/j.lfs.2021.119352</pub-id>
</citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ichinose</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Shitara</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Tajika</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kobayashi</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Yamamoto</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Hamano</surname>
<given-names>N.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Factors affecting the onset and progression of rotator cuff tears in the general population</article-title>. <source>Sci. Rep.</source> <volume>11</volume> (<issue>1</issue>), <fpage>1858</fpage>&#x2013;<lpage>8</lpage>. <pub-id pub-id-type="doi">10.1038/s41598-020-79867-x</pub-id>
</citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ji</surname>
<given-names>L. L.</given-names>
</name>
<name>
<surname>Yeo</surname>
<given-names>D.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Mitochondrial dysregulation and muscle disuse atrophy</article-title>. <source>F1000Res</source> <volume>8</volume>, <fpage>F1000</fpage>. <pub-id pub-id-type="doi">10.12688/f1000research.19139.1</pub-id>
</citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Joshi</surname>
<given-names>S. K.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>H. T.</given-names>
</name>
<name>
<surname>Feeley</surname>
<given-names>B. T.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>X.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Differential ubiquitin-proteasome and autophagy signaling following rotator cuff tears and suprascapular nerve injury</article-title>. <source>J. Orthop. Res.</source> <volume>32</volume> (<issue>1</issue>), <fpage>138</fpage>&#x2013;<lpage>144</lpage>. <pub-id pub-id-type="doi">10.1002/jor.22482</pub-id>
</citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jung</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Hoon Kim</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2020a</year>). <article-title>The natural course of and risk factors for tear progression in conservatively treated full-thickness rotator cuff tears</article-title>. <source>J. Shoulder Elb. Surg.</source> <volume>29</volume> (<issue>6</issue>), <fpage>1168</fpage>&#x2013;<lpage>1176</lpage>. <pub-id pub-id-type="doi">10.1016/j.jse.2019.10.027</pub-id>
</citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jung</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Jeong</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>S-W.</given-names>
</name>
</person-group> (<year>2020b</year>). <article-title>Autophagy as a decisive process for cell death</article-title>. <source>Exp. Mol. Med.</source> <volume>52</volume> (<issue>6</issue>), <fpage>921</fpage>&#x2013;<lpage>930</lpage>. <pub-id pub-id-type="doi">10.1038/s12276-020-0455-4</pub-id>
</citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Keener</surname>
<given-names>J. D.</given-names>
</name>
<name>
<surname>Galatz</surname>
<given-names>L. M.</given-names>
</name>
<name>
<surname>Teefey</surname>
<given-names>S. A.</given-names>
</name>
<name>
<surname>Middleton</surname>
<given-names>W. D.</given-names>
</name>
<name>
<surname>Steger-May</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Stobbs-Cucchi</surname>
<given-names>G.</given-names>
</name>
<etal/>
</person-group> (<year>2015</year>). <article-title>A prospective evaluation of survivorship of asymptomatic degenerative rotator cuff tears</article-title>. <source>JBJS</source> <volume>97</volume> (<issue>2</issue>), <fpage>89</fpage>&#x2013;<lpage>98</lpage>. <pub-id pub-id-type="doi">10.2106/JBJS.N.00099</pub-id>
</citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Keener</surname>
<given-names>J. D.</given-names>
</name>
<name>
<surname>Patterson</surname>
<given-names>B. M.</given-names>
</name>
<name>
<surname>Orvets</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Chamberlain</surname>
<given-names>A. M.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Degenerative rotator cuff tears: refining surgical indications based on natural history data</article-title>. <source>J. Am. Acad. Orthop. Surg.</source> <volume>27</volume> (<issue>5</issue>), <fpage>156</fpage>&#x2013;<lpage>165</lpage>. <pub-id pub-id-type="doi">10.5435/JAAOS-D-17-00480</pub-id>
</citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname>
<given-names>Y-S.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>S-E.</given-names>
</name>
<name>
<surname>Bae</surname>
<given-names>S-H.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>H-J.</given-names>
</name>
<name>
<surname>Jee</surname>
<given-names>W-H.</given-names>
</name>
<name>
<surname>Park</surname>
<given-names>C. K.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Tear progression of symptomatic full-thickness and partial-thickness rotator cuff tears as measured by repeated MRI</article-title>. <source>Knee Surg. Sports Traumatol. Arthrosc.</source> <volume>25</volume> (<issue>7</issue>), <fpage>2073</fpage>&#x2013;<lpage>2080</lpage>. <pub-id pub-id-type="doi">10.1007/s00167-016-4388-3</pub-id>
</citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname>
<given-names>T. Y.</given-names>
</name>
<name>
<surname>Leem</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>J. M.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>S. R.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Control of reactive oxygen species for the prevention of Parkinson&#x2019;s disease: the possible application of flavonoids</article-title>. <source>Antioxidants</source> <volume>9</volume> (<issue>7</issue>), <fpage>583</fpage>. <pub-id pub-id-type="doi">10.3390/antiox9070583</pub-id>
</citation>
</ref>
<ref id="B29">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kwong</surname>
<given-names>C. A.</given-names>
</name>
<name>
<surname>Ono</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Carroll</surname>
<given-names>M. J.</given-names>
</name>
<name>
<surname>Fruson</surname>
<given-names>L. W.</given-names>
</name>
<name>
<surname>More</surname>
<given-names>K. D.</given-names>
</name>
<name>
<surname>Thornton</surname>
<given-names>G. M.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Full-thickness rotator cuff tears: what is the rate of tear progression? A systematic review</article-title>. <source>Arthrosc. J. Arthrosc. Relat. Surg.</source> <volume>35</volume> (<issue>1</issue>), <fpage>228</fpage>&#x2013;<lpage>234</lpage>. <pub-id pub-id-type="doi">10.1016/j.arthro.2018.07.031</pub-id>
</citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lui</surname>
<given-names>P. P. Y.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Yao</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Roles of oxidative stress in acute tendon injury and degenerative tendinopathy&#x2014;a target for intervention</article-title>. <source>Int. J. Mol. Sci.</source> <volume>23</volume>, <fpage>3571</fpage>. <pub-id pub-id-type="doi">10.3390/ijms23073571</pub-id>
</citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Montagna</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Svensson</surname>
<given-names>R. B.</given-names>
</name>
<name>
<surname>Bayer</surname>
<given-names>M. L.</given-names>
</name>
<name>
<surname>Rizza</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Maiani</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Yeung</surname>
<given-names>C-Y. C.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Autophagy guards tendon homeostasis</article-title>. <source>Cell. Death Dis.</source> <volume>13</volume> (<issue>4</issue>), <fpage>402</fpage>. <pub-id pub-id-type="doi">10.1038/s41419-022-04824-7</pub-id>
</citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nakamura</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Yokoya</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Mochizuki</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Harada</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Kikugawa</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Ochi</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Monitoring of progression of nonsurgically treated rotator cuff tears by magnetic resonance imaging</article-title>. <source>J. Orthop. Sci.</source> <volume>20</volume> (<issue>2</issue>), <fpage>314</fpage>&#x2013;<lpage>320</lpage>. <pub-id pub-id-type="doi">10.1007/s00776-014-0680-6</pub-id>
</citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Narvani</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Imam</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Goden&#xe8;che</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Calvo</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Corbett</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Wallace</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Degenerative rotator cuff tear, repair or not repair? A review of current evidence</article-title>. <source>Ann. R. Coll. Surg. Engl.</source> <volume>102</volume> (<issue>4</issue>), <fpage>248</fpage>&#x2013;<lpage>255</lpage>. <pub-id pub-id-type="doi">10.1308/rcsann.2019.0173</pub-id>
</citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Oak</surname>
<given-names>N. R.</given-names>
</name>
<name>
<surname>Gumucio</surname>
<given-names>J. P.</given-names>
</name>
<name>
<surname>Flood</surname>
<given-names>M. D.</given-names>
</name>
<name>
<surname>Saripalli</surname>
<given-names>A. L.</given-names>
</name>
<name>
<surname>Davis</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Harning</surname>
<given-names>J. A.</given-names>
</name>
<etal/>
</person-group> (<year>2014</year>). <article-title>Inhibition of 5-LOX, COX-1, and COX-2 increases tendon healing and reduces muscle fibrosis and lipid accumulation after rotator cuff repair</article-title>. <source>Am. J. Sports Med.</source> <volume>42</volume> (<issue>12</issue>), <fpage>2860</fpage>&#x2013;<lpage>2868</lpage>. <pub-id pub-id-type="doi">10.1177/0363546514549943</pub-id>
</citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Oh</surname>
<given-names>J. H.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>Y. H.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>T. H.</given-names>
</name>
<name>
<surname>Jang</surname>
<given-names>S. I.</given-names>
</name>
<name>
<surname>Kwon</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>The natural history of high-grade partial thickness rotator cuff tears: the conversion rate to full thickness tears and affecting factors</article-title>. <source>Clin. Orthop. Surg.</source> <volume>12</volume> (<issue>4</issue>), <fpage>514</fpage>&#x2013;<lpage>520</lpage>. <pub-id pub-id-type="doi">10.4055/cios19167</pub-id>
</citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Prabhath</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Vernekar</surname>
<given-names>V. N.</given-names>
</name>
<name>
<surname>Vasu</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Badon</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Avochinou</surname>
<given-names>J. E.</given-names>
</name>
<name>
<surname>Asandei</surname>
<given-names>A. D.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Kinetic degradation and biocompatibility evaluation of polycaprolactone&#x2010;based biologics delivery matrices for regenerative engineering of the rotator cuff</article-title>. <source>J. Biomed. Mater. Res. Part A</source> <volume>109</volume> (<issue>11</issue>), <fpage>2137</fpage>&#x2013;<lpage>2153</lpage>. <pub-id pub-id-type="doi">10.1002/jbm.a.37200</pub-id>
</citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Prasetia</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Kholinne</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Suvarly</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Rosa</surname>
<given-names>W. Y.</given-names>
</name>
<name>
<surname>Pratiwi</surname>
<given-names>Y. S.</given-names>
</name>
<name>
<surname>Herman</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>High-grade bursal side rotator-cuff repair: A surgical outcome review</article-title>. <source>Orthop. Res. Rev.</source> <volume>13</volume>, <fpage>179</fpage>&#x2013;<lpage>186</lpage>. <pub-id pub-id-type="doi">10.2147/ORR.S323092</pub-id>
</citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Preissler</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ron</surname>
<given-names>D.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Early events in the endoplasmic reticulum unfolded protein response</article-title>. <source>Cold Spring Harb. Perspect. Biol.</source> <volume>11</volume> (<issue>4</issue>), <fpage>a033894</fpage>. <pub-id pub-id-type="doi">10.1101/cshperspect.a033894</pub-id>
</citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Runwal</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Stamatakou</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Siddiqi</surname>
<given-names>F. H.</given-names>
</name>
<name>
<surname>Puri</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Rubinsztein</surname>
<given-names>D. C.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>LC3-positive structures are prominent in autophagy-deficient cells</article-title>. <source>Sci. Rep.</source> <volume>9</volume> (<issue>1</issue>), <fpage>10147</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-019-46657-z</pub-id>
</citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sambandam</surname>
<given-names>S. N.</given-names>
</name>
<name>
<surname>Khanna</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Gul</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Mounasamy</surname>
<given-names>V.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Rotator cuff tears: an evidence based approach</article-title>. <source>World J. Orthop.</source> <volume>6</volume> (<issue>11</issue>), <fpage>902</fpage>&#x2013;<lpage>918</lpage>. <pub-id pub-id-type="doi">10.5312/wjo.v6.i11.902</pub-id>
</citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sgroi</surname>
<given-names>T. A.</given-names>
</name>
<name>
<surname>Cilenti</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Rotator cuff repair: post-operative rehabilitation concepts</article-title>. <source>Curr. Rev. Musculoskelet. Med.</source> <volume>11</volume> (<issue>1</issue>), <fpage>86</fpage>&#x2013;<lpage>91</lpage>. <pub-id pub-id-type="doi">10.1007/s12178-018-9462-7</pub-id>
</citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shin</surname>
<given-names>S-J.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>A comparison of 2 repair techniques for partial-thickness articular-sided rotator cuff tears</article-title>. <source>Arthrosc. J. Arthrosc. Relat. Surg.</source> <volume>28</volume> (<issue>1</issue>), <fpage>25</fpage>&#x2013;<lpage>33</lpage>. <pub-id pub-id-type="doi">10.1016/j.arthro.2011.07.005</pub-id>
</citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Smith</surname>
<given-names>J. A.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Regulation of cytokine production by the unfolded protein response; implications for infection and autoimmunity</article-title>. <source>Front. Immunol.</source> <volume>9</volume>, <fpage>422</fpage>. <pub-id pub-id-type="doi">10.3389/fimmu.2018.00422</pub-id>
</citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Song</surname>
<given-names>Z. C.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Shu</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Ni</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Hypoxia induces apoptosis and autophagic cell death in human periodontal ligament cells through HIF-1&#x3b1; pathway</article-title>. <source>Cell. Prolif.</source> <volume>45</volume> (<issue>3</issue>), <fpage>239</fpage>&#x2013;<lpage>248</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-2184.2012.00810.x</pub-id>
</citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sowers</surname>
<given-names>C. R.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Bourne</surname>
<given-names>R. A.</given-names>
</name>
<name>
<surname>McGrath</surname>
<given-names>B. C.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Bevilacqua</surname>
<given-names>S. C.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>The protein kinase PERK/EIF2AK3 regulates proinsulin processing not via protein synthesis but by controlling endoplasmic reticulum chaperones</article-title>. <source>J. Biol. Chem.</source> <volume>293</volume> (<issue>14</issue>), <fpage>5134</fpage>&#x2013;<lpage>5149</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M117.813790</pub-id>
</citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tsuchiya</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Davison</surname>
<given-names>E. M.</given-names>
</name>
<name>
<surname>Rashid</surname>
<given-names>M. S.</given-names>
</name>
<name>
<surname>Bois</surname>
<given-names>A. J.</given-names>
</name>
<name>
<surname>LeBlanc</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>More</surname>
<given-names>K. D.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Determining the rate of full-thickness progression in partial-thickness rotator cuff tears: A systematic review</article-title>. <source>J. Shoulder Elb. Surg.</source> <volume>30</volume> (<issue>2</issue>), <fpage>449</fpage>&#x2013;<lpage>455</lpage>. <pub-id pub-id-type="doi">10.1016/j.jse.2020.08.022</pub-id>
</citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Jia</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Xiao</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>L.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Effect of sustained hypoxia on autophagy of genioglossus muscle-derived stem cells</article-title>. <source>Med. Sci. Monit.</source> <volume>24</volume>, <fpage>2218</fpage>&#x2013;<lpage>2224</lpage>. <pub-id pub-id-type="doi">10.12659/msm.906195</pub-id>
</citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wen</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Ge</surname>
<given-names>X. F.</given-names>
</name>
<name>
<surname>Dong</surname>
<given-names>G. J.</given-names>
</name>
<name>
<surname>Pang</surname>
<given-names>H. B.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>L. H.</given-names>
</name>
</person-group> (<year>2016</year>). [<article-title>The changes of HIF-1&#x3b1; and AMPK&#x3b1;2 expression levels during skeletal muscle blunt injury recovery</article-title>]. <source>Zhongguo Ying Yong Sheng Li Xue Za Zhi</source> <volume>32</volume> (<issue>3</issue>), <fpage>260</fpage>&#x2013;<lpage>263</lpage>. <pub-id pub-id-type="doi">10.13459/j.cnki.cjap.2016.03.018</pub-id>
</citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wong</surname>
<given-names>Y. C.</given-names>
</name>
<name>
<surname>Holzbaur</surname>
<given-names>E. L.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Optineurin is an autophagy receptor for damaged mitochondria in parkin-mediated mitophagy that is disrupted by an ALS-linked mutation</article-title>. <source>Proc. Natl. Acad. Sci.</source> <volume>111</volume> (<issue>42</issue>), <fpage>E4439</fpage>&#x2013;<lpage>E4448</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1405752111</pub-id>
</citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wu</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Dela Rosa</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2011</year>). <article-title>Cellular response and extracellular matrix breakdown in rotator cuff tendon rupture</article-title>. <source>Arch. Orthop. Trauma Surg.</source> <volume>131</volume> (<issue>3</issue>), <fpage>405</fpage>&#x2013;<lpage>411</lpage>. <pub-id pub-id-type="doi">10.1007/s00402-010-1157-5</pub-id>
</citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xie</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>de Souza Alves</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>von der Haar</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>O&#x2019;Keefe</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Lenchine</surname>
<given-names>R. V.</given-names>
</name>
<name>
<surname>Jensen</surname>
<given-names>K. B.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Regulation of the elongation phase of protein synthesis enhances translation accuracy and modulates lifespan</article-title>. <source>Curr. Biol.</source> <volume>29</volume> (<issue>5</issue>), <fpage>737</fpage>&#x2013;<lpage>749</lpage>. <comment>e5</comment>. <pub-id pub-id-type="doi">10.1016/j.cub.2019.01.029</pub-id>
</citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Moqbel</surname>
<given-names>S. A. A.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>C.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Nesfatin-1 promotes the osteogenic differentiation of tendon-derived stem cells and the pathogenesis of heterotopic ossification in rat tendons via the mTOR pathway</article-title>. <source>Front. Cell. Dev. Biol.</source> <volume>8</volume>, <fpage>547342</fpage>. <pub-id pub-id-type="doi">10.3389/fcell.2020.547342</pub-id>
</citation>
</ref>
<ref id="B53">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yamamoto</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Mineta</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Kawakami</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Sano</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Itoi</surname>
<given-names>E.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Risk factors for tear progression in symptomatic rotator cuff tears: A prospective study of 174 shoulders</article-title>. <source>Am. J. Sports Med.</source> <volume>45</volume> (<issue>11</issue>), <fpage>2524</fpage>&#x2013;<lpage>2531</lpage>. <pub-id pub-id-type="doi">10.1177/0363546517709780</pub-id>
</citation>
</ref>
<ref id="B54">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zeeshan</surname>
<given-names>H. M. A.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>G. H.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>H-R.</given-names>
</name>
<name>
<surname>Chae</surname>
<given-names>H-J.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Endoplasmic reticulum stress and associated ROS</article-title>. <source>Int. J. Mol. Sci.</source> <volume>17</volume> (<issue>3</issue>), <fpage>327</fpage>. <pub-id pub-id-type="doi">10.3390/ijms17030327</pub-id>
</citation>
</ref>
<ref id="B55">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Jia</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Xiao</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>L.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Effect of sustained hypoxia on autophagy of genioglossus muscle-derived stem cells</article-title>. <source>Med. Sci. Monit. Int. Med. J. Exp. Clin. Res.</source> <volume>24</volume>, <fpage>2218</fpage>&#x2013;<lpage>2224</lpage>. <pub-id pub-id-type="doi">10.12659/msm.906195</pub-id>
</citation>
</ref>
<ref id="B56">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Lei</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Redox signaling and unfolded protein response coordinate cell fate decisions under ER stress</article-title>. <source>Redox Biol.</source> <volume>25</volume>, <fpage>101047</fpage>. <pub-id pub-id-type="doi">10.1016/j.redox.2018.11.005</pub-id>
</citation>
</ref>
<ref id="B57">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zheng</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Zheng</surname>
<given-names>X.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Leucine attenuates muscle atrophy and autophagosome formation by activating PI3K/AKT/mTOR signaling pathway in rotator cuff tears</article-title>. <source>Cell. Tissue Res.</source> <volume>378</volume> (<issue>1</issue>), <fpage>113</fpage>&#x2013;<lpage>125</lpage>. <pub-id pub-id-type="doi">10.1007/s00441-019-03021-x</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>