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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Physiol.</journal-id>
<journal-title>Frontiers in Physiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Physiol.</abbrev-journal-title>
<issn pub-type="epub">1664-042X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">893862</article-id>
<article-id pub-id-type="doi">10.3389/fphys.2022.893862</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Physiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Inferring Insulin Secretion Rate from Sparse Patient Glucose and Insulin Measures</article-title>
<alt-title alt-title-type="left-running-head">Abohtyra et al.</alt-title>
<alt-title alt-title-type="right-running-head">Inferring Insulin Secretion Rate</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Abohtyra</surname>
<given-names>Rammah M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1636889/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chan</surname>
<given-names>Christine L.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1215930/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Albers</surname>
<given-names>David J.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1470731/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Gluckman</surname>
<given-names>Bruce J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/177937/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Center for Neural Engineering</institution>, <institution>The Pennsylvania State University</institution>, <addr-line>University Park</addr-line>, <addr-line>PA</addr-line>, <country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Engineering Science and Mechanics</institution>, <institution>The Pennsylvania State University</institution>, <addr-line>University Park</addr-line>, <addr-line>PA</addr-line>, <country>United States</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Section of Pediatric Endocrinology</institution>, <institution>University of Colorado School of Medicine</institution>, <addr-line>Aurora</addr-line>, <addr-line>CO</addr-line>, <country>United States</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Department of Bioengineering</institution>, <institution>University of Colorado School of Medicine</institution>, <addr-line>Aurora</addr-line>, <addr-line>CO</addr-line>, <country>United States</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Department of Neurosurgery</institution>, <institution>College of Medicine</institution>, <institution>The Pennsylvania State University</institution>, <addr-line>University Park</addr-line>, <addr-line>PA</addr-line>, <country>United States</country>
</aff>
<aff id="aff6">
<sup>6</sup>
<institution>Department of Biomedical Engineering</institution>, <institution>The Pennsylvania State University</institution>, <addr-line>University Park</addr-line>, <addr-line>PA</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/343209/overview">Stephanie Therese Chung</ext-link>, National Institutes of Health (NIH), United States</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/492123/overview">Ram Jagannathan</ext-link>, Emory University, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/156811/overview">Pranay Goel</ext-link>, Indian Institute of Science Education and Research, India</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Bruce J. Gluckman, <email>BruceGluckman@pus.edu</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Clinical and Translational Physiology, a section of the journal Frontiers in Physiology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>03</day>
<month>08</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>13</volume>
<elocation-id>893862</elocation-id>
<history>
<date date-type="received">
<day>10</day>
<month>03</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>21</day>
<month>06</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Abohtyra, Chan, Albers and Gluckman.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Abohtyra, Chan, Albers and Gluckman</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>The insulin secretion rate (ISR) contains information that can provide a personal, quantitative understanding of endocrine function. If the ISR can be reliably inferred from measurements, it could be used for understanding and clinically diagnosing problems with the glucose regulation system.</p>
<p>
<bold>Objective</bold>: This study aims to develop a model-based method for inferring a parametrization of the ISR and related physiological information among people with different glycemic conditions in a robust manner. The developed algorithm is applicable for both dense or sparsely sampled plasma glucose/insulin measurements, where sparseness is defined in terms of sampling time with respect to the fastest time scale of the dynamics.</p>
<p>
<bold>Methods:</bold> An algorithm for parametrizing and validating a functional form of the ISR for different compartmental models with unknown but estimable ISR function and absorption/decay rates describing the dynamics of insulin accumulation was developed. The method and modeling applies equally to c-peptide secretion rate (CSR) when c-peptide is measured. Accuracy of fit is reliant on reconstruction error of the measured trajectories, and when c-peptide is measured the relationship between CSR and ISR. The algorithm was applied to data from 17 subjects with normal glucose regulatory systems and 9 subjects with cystic fibrosis related diabetes (CFRD) in which glucose, insulin and c-peptide were measured in course of oral glucose tolerance tests (OGTT).</p>
<p>
<bold>Results:</bold> This model-based algorithm inferred parametrization of the ISR and CSR functional with relatively low reconstruction error for 12 of 17 control and 7 of 9 CFRD subjects. We demonstrate that when there are suspect measurements points, the validity of excluding them may be interrogated with this method.</p>
<p>
<bold>Significance:</bold> A new estimation method is available to infer the ISR and CSR functional profile along with plasma insulin and c-peptide absorption rates from sparse measurements of insulin, c-peptide, and plasma glucose concentrations. We propose a method to interrogate and exclude potentially erroneous OGTT measurement points based on reconstruction errors.</p>
</abstract>
<kwd-group>
<kwd>estimation algorithm</kwd>
<kwd>ISR function</kwd>
<kwd>compartment models</kwd>
<kwd>insulin and C-peptide</kwd>
<kwd>OGTT</kwd>
<kwd>and CSR/ISR molar ratio</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Insulin is the essential hormone that regulates cellular energy supply and the intracellular transport of glucose into muscle and adipose tissues (<xref ref-type="bibr" rid="B33">Wilcox, 2005</xref>). The endogenous insulin secretion rate (ISR) quantifies the amount of insulin the body is able to produce as a function of glucose concentration in the blood, providing important information for understanding how an individual&#x2019;s endocrine system is able to use insulin to regulate glucose regulation. The primary physiological stimulation for insulin secretion from beta-cell is elevated blood glucose levels following nutrition intake and glucose bolus (<xref ref-type="bibr" rid="B1">Ahr&#xe9;n and Pacini, 2004</xref>).</p>
<p>The objective of this work is to provide a methodology to infer the <italic>functional form</italic> of the ISR from insulin and glucose measurements at a personalized level that is robust to outliers.</p>
<p>Our motivation for this objective is threefold: First, from a clinical diagnostic standpoint, the ISR is a measure of the input/output function of a segment of the glucose regulation system - the pancreatic beta cells - and therefore would allow monitoring of their health or disease progression; second, accurate parametrization of the functional performance of the beta cells will allow more accurate modeling of the glucose regulation system and therefore understanding of normal and abnormal glucose regulation; and third, personalized ISR estimation combined with better modeling will allow for better interpretation of aberrant dynamics observed in standard glucose monitoring protocols.</p>
<p>In addition, glucose tolerance tests are intrusive and burdensome for subjects and have a relatively high rate of error due to outliers which limits their usefulness at a population scale. The development of an ISR estimation method that is robust to outliers, or able to identify and exclude outliers, increases the practical applicability of such tests.</p>
<p>Computational models of glucose regulation do already exist and have embedded in them model components for beta-cell function. But different models invoke significantly different functions for the ISR, as illustrated in the <xref ref-type="fig" rid="F1">Figure 1A</xref> for the studies in (<xref ref-type="bibr" rid="B27">Toli&#x107; et al., 2000</xref>; <xref ref-type="bibr" rid="B17">Liu et al., 2009</xref>; <xref ref-type="bibr" rid="B11">Ha et al., 2016</xref>). These different ISR functions lead to significantly different glucose dynamics if used interchangeably within the same glucose regulation model for the same system input, as illustrated in the <xref ref-type="fig" rid="F1">Figures 1B,C</xref>. Note that the functional forms change both the height and time course of the blood glucose response.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Three different ISR functions <bold>(A)</bold> generate blood glucose variations, in long time course <bold>(B)</bold> and short time course <bold>(C)</bold> simulated using the model developed by <xref ref-type="bibr" rid="B29">Topp et al. (2000)</xref> with a meal; <italic>u</italic>
<sub>1</sub> is the ISR function adopted from <xref ref-type="bibr" rid="B17">Liu et al. (2009)</xref>; <italic>u</italic>
<sub>2</sub> is the ISR used in <xref ref-type="bibr" rid="B27">Toli&#x107; et al. (2000)</xref>, and <italic>u</italic>
<sub>3</sub> is the ISR function used in the model of <xref ref-type="bibr" rid="B11">Ha et al. (2016)</xref>.</p>
</caption>
<graphic xlink:href="fphys-13-893862-g001.tif"/>
</fig>
<p>The most common methods to estimate ISR utilize plasma insulin and c-peptide concentration measurements. C-peptide (connecting peptide) is an amino acid polypeptide that is released, along with insulin, from the pancreatic beta cells when proinsulin is split into insulin and c-peptide (<xref ref-type="bibr" rid="B26">Steiner et al., 1967</xref>; <xref ref-type="bibr" rid="B24">Rigler et al., 1999</xref>), at a molar release ratio of 1:1 (ISR to c-peptide secretaoin rate CSR) (<xref ref-type="bibr" rid="B15">Lebowitz and Blumenthal, 1993</xref>). C-peptide is often used to distinguish insulin produced by the body from injected insulin to estimate ISR, to determine insulin resistance, and to indicate a differential diagnosis of fasting hypoglycemia with hyperinsulinism. Pancreatic beta cells release both insulin and c-peptide directly into the blood stream in the portal vein, which then passes through the liver and then combines with the rest of the circulating blood. Insulin is sensed by hypatocrytes, and signals them to start glucose uptake, and inhibit gluconeogenesis, glycogenolysis, and ketogenesis (<xref ref-type="bibr" rid="B3">Brundin, 1999</xref>), and at high levels to activate carcino-embryonic antigen-related cell adhesion molecule 1 (CEACAM1) to increase hypatic insulin clearance (<xref ref-type="bibr" rid="B21">Najjar and Perdomo, 2019</xref>). In contrast to insulin, c-peptide is primarily degraded by the kidneys (<xref ref-type="bibr" rid="B13">Jones and Hattersley, 2013</xref>). Insulin is degraded within 15&#x2013;30&#xa0;min in the bloodstream (<xref ref-type="bibr" rid="B8">Farris et al., 2003</xref>), while c-peptide degradation is longer (<xref ref-type="bibr" rid="B16">Leighton et al., 2017</xref>).</p>
<p>Glucose tolerance, insulin resistence, and insulin secretion in a clinical setting are generally measured with various types of glucose tolerance tests. These tests include the intravenous glucose tolerance test (IVGTT) (<xref ref-type="bibr" rid="B2">Bergman et al., 1981</xref>), fasting glucose assessment (<xref ref-type="bibr" rid="B20">Matthews et al., 1985</xref>; <xref ref-type="bibr" rid="B22">Pacini and Mari, 2003</xref>), and the oral glucose tolerance test (OGTT) (<xref ref-type="bibr" rid="B9">Ferrannini and Mari, 2004</xref>). IVGTT are less frequently performed because they are invasive and challenging to endure to the patient and expensive to achieve (<xref ref-type="bibr" rid="B18">Lotz et al., 2009</xref>) because of the frequent sampling protocols of the c-peptide up to every minute during an IVGTT. The more commonly used OGTT requires fasting patients to ingest a drink with a fixed amount of glucose followed by glucose measurements every 15&#x2013;30&#xa0;min over the subsequent two to 4&#xa0;hours (<xref ref-type="bibr" rid="B23">Reaven et al., 1993</xref>).</p>
<p>Several model-based estimation methods have been developed to estimate ISR in the sense of the time course of insulin production. One approach is to estimate from insulin and c-peptide measurements (<xref ref-type="bibr" rid="B32">Watanabe et al., 1998</xref>; <xref ref-type="bibr" rid="B31">Watanabe and Bergman, 2000</xref>; <xref ref-type="bibr" rid="B14">Kjems et al., 2001</xref>; <xref ref-type="bibr" rid="B30">Venugopal et al., 2021</xref>). These multiple compartment methods treat ISR as an unknown time trajectory either without <italic>a priori</italic> knowledge of its secretion rate function or with different functions to describe the secretion rate. For example, in (<xref ref-type="bibr" rid="B14">Kjems et al., 2001</xref>), the deconvolution method is used to estimated ISR by modeling ISR with two exponential functions (biexponential model) with unknown parameters. Another approach that has both one-compartment model (<xref ref-type="bibr" rid="B32">Watanabe et al., 1998</xref>) and two-compartment model (<xref ref-type="bibr" rid="B31">Watanabe and Bergman, 2000</xref>) forms is used to estimate the time traces of ISR using a smoothed c-peptide profile generated by cubic spline interpolation. More recently, <xref ref-type="bibr" rid="B30">Venugopal et al. (2021)</xref> developed a method to estimate ISR using the Oral c-peptide Minimal Model (OCMM). This method describes the ISR function by two rates proportional linearly with the c-peptide and glucose concentrations. Another recent estimation approach based on OGTT measurements of insulin and c-peptide has been developed to estimate the ISR time traces using two different models, for insulin and c-peptide (<xref ref-type="bibr" rid="B25">Schiavon et al., 2021</xref>).</p>
<p>To this end, we develop a new estimation algorithm to infer the ISR from glucose/insulin measurements such as OGTT data. Using a compartmental model for the accumulation/degradation of insulin similar to (<xref ref-type="bibr" rid="B27">Toli&#x107; et al., 2000</xref>; <xref ref-type="bibr" rid="B17">Liu et al., 2009</xref>; <xref ref-type="bibr" rid="B11">Ha et al., 2016</xref>), this new method begins with a parametrization of the form of the ISR function that takes glucose concentration as an input and then estimates the parametrization parameters by minimizing the difference between the model output and insulin measurements. The same accumulation/degradation model and inference method can be used to independently infer the c-peptide secretion rate from glucose/c-peptide data when available.</p>
<p>We note that the method we derive is not reliant on the experimental protocol being an OGTT, nor that all the data are measured densely with respect to the fastest time scale of the glucose or insulin dynamics. This time is estimated in the literature to be on the order of 8&#x2013;20&#xa0;min for circulating glucose/insulin dynamics, and faster if one is trying to resolve the pulsitivity of insulin production. In this sense it works with sparsely sampled data. This definition is in contrast to terms in the literature that refer to OGTTs with less than 7, and as little as 3, measurement points as &#x2018;sparse OGTTs&#x2019;.</p>
<p>When both insulin and c-peptide are available, because the ISR and CSR functionals are independently inferred, we can use the expected 1:1&#xa0;M ratio to validate the estimates and to identify data-related errors.</p>
<p>Our approach provides physiological insights into beta-cell secretion rates for people with different ISR health conditions. We validate the performance of the approach using OGTT clinical data for control and CFRD subjects.</p>
</sec>
<sec id="s2">
<title>2 Materials and Methods</title>
<p>The proposed algorithm uses parametric models including a single and a two-compartment model, and ISR and CSR function forms with physiological parameters. The parameters of these models and ISR/CSR functions are assumed unknown, but can be inferred from patient data, including plasma glucose, insulin, and c-peptide measurements. We test the performance of this algorithm using OGTT clinical data collected from control and CFRD subjects.</p>
<sec id="s2-1">
<title>2.1 Human Oral Glucose Tolerance Test Data</title>
<p>Data used is a subset of data collected under the GlycEmic Monitoring in CF (GEM-CF, NCT02211235), a study of early glucose abnormalities in youth with cystic fibrosis. The study was approved by the Colorado Multiple Institutional Review Board (Aurora, CO), and informed consent and assent obtained. Collection details have been previously published in (<xref ref-type="bibr" rid="B28">Tommerdahl et al., 2021</xref>; <xref ref-type="bibr" rid="B4">Chan et al., 2022</xref>).</p>
<p>In short, inclusion criteria for participants with CFRD included a confirmed diagnosis of CFRD by newborn screen, sweat chloride testing, or genetic testing. Exclusion criteria for participants with CFRD included known Type 1 or Type 2 diabetes, use of medications affecting glucose (eg, insulin, systemic steroids) in the prior 3 months, hospitalization in the prior 6 weeks, or pregnancy. For this report, n &#x3d; 9 youth with CFRD were included. N &#x3d; 3 (33%) were male. CFRD individuals were an average age of 14.6 &#xb1; 3.2 years with a mean BMI of 19.0 &#xb1; 2.7&#xa0;kg/m<sup>2</sup> and BMI z-score of - 0.28 &#xb1; 0.53. Glucose tolerance categories by OGTT were as follows&#x2014;6 CFRD patients had CFRD based on 2&#xa0;h OGTT glucose <inline-formula id="inf1">
<mml:math id="m1">
<mml:mo>&#x3e;</mml:mo>
</mml:math>
</inline-formula> 200&#xa0;mg/dl and 3 were classified as NGT. The CF cohort had an average A1C of 5.7 &#xb1; 0.2%.</p>
<p>Healthy controls without CFRD were identified using recruitment flyers and emails at the University of Colorado Anschutz Medical Campus. Exclusion criteria for healthy controls (HCs) included diagnoses of diabetes or prediabetes, overweight (defined as BMI &#x2265;85th% by the Centers for Disease Control and Prevention BMI growth charts in youth), chronic disease, acute illness, or pregnancy. A total of <italic>n</italic> &#x3d; 17&#xa0;HCs were included of which n &#x3d; 9 (53%) were male. HCs had an average age of 13.3 &#xb1; 3.6 years, BMI of 18.5 &#xb1; 2.9&#xa0;kg/m<sup>2</sup>, and BMI z-score of &#x2212;0.20 &#xb1; 0.68. The HCs had an average A1C of 5.3 &#xb1; 0.2%.</p>
<p>Subjects underwent a standard OGTT protocol, with blood drawn at times.<italic>t</italic>
<sub>
<italic>i</italic>
</sub> &#x2208; { &#x2212; 10, 0, 20, 30, 60, 90, 120, 150, 180} min, and assayed for plasma glucose, insulin, and c-peptide concentrations.</p>
</sec>
<sec id="s2-2">
<title>2.2 Insulin and C-peptide Models</title>
<p>The two models, described in <xref ref-type="fig" rid="F2">Figure 2</xref>, are used in the algorithm to reconstruct ISR and CSR. These models, include a single and a two-compartment model both of which use the same ISR and CSR function but with different parameters to describe the time evolution of plasma insulin and c-peptide. The single compartment model consists of a single plasma pool with a degradation time for plasma insulin and c-peptide. On the other hand, the two-compartment model tracks insulin and c-peptide concentrations in both plasma and interstitial compartments.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Schematic representations for the single-compartment model (Top) used to describe plasma insulin and c-peptide, and two-compartment model (Bottom) used to describe both plasma and interstitial insulin and c-peptide.</p>
</caption>
<graphic xlink:href="fphys-13-893862-g002.tif"/>
</fig>
</sec>
<sec id="s2-3">
<title>2.2.1 Single Compartment Model</title>
<p>The detail of the single model (<xref ref-type="fig" rid="F2">Figure 2</xref> Top) is parameterized as follows. The pancreatic beta-cell, which has a nonlinear output secretion function, is denoted by <italic>u</italic>
<sub>
<italic>j</italic>
</sub>, the subscript <italic>j</italic> is an index that takes <italic>I</italic> for insulin and <italic>Cpep</italic> for c-peptide, and releases insulin and c-peptide using various physiological parameters. The subscript <italic>p</italic> denotes plasma, <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> and <italic>&#x3c4;</italic>
<sub>
<italic>Cpep</italic>
</sub> denote the degradation time for the plasma insulin and c-peptide, respectively. The single compartment model is given by the equation:<disp-formula id="e1">
<mml:math id="m2">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>u</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>/</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
<label>(1)</label>
</disp-formula>where <italic>x</italic>
<sub>
<italic>pj</italic>
</sub> is plasma insulin or c-peptide, and <italic>&#x3c4;</italic>
<sub>
<italic>pj</italic>
</sub> is the associated degradation time.</p>
<p>Following (<xref ref-type="bibr" rid="B27">Toli&#x107; et al., 2000</xref>; <xref ref-type="bibr" rid="B17">Liu et al., 2009</xref>), we use a sigmodal function, which is glucose dependent, for both ISR (<italic>u</italic>
<sub>
<italic>pI</italic>
</sub>) and CSR (<italic>u</italic>
<sub>
<italic>pC</italic>
</sub>) are given by<disp-formula id="e2">
<mml:math id="m3">
<mml:msub>
<mml:mrow>
<mml:mi>u</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2b;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>C</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:mfrac>
<mml:mo>.</mml:mo>
</mml:math>
<label>(2)</label>
</disp-formula>Here, <italic>g</italic>
<sub>
<italic>p</italic>
</sub>(<italic>t</italic>) (mg/dl) is the plasma glucose concentration at a given time <italic>t</italic> (min), <italic>K</italic>
<sub>
<italic>m</italic>
</sub> represents a maximum production rate for insulin (<italic>&#x3bc;</italic>U/ml/min) or c-peptide (ng/ml/min), <italic>C</italic>
<sub>0</sub> refers to a glucose mid-point (mg/dl), and <italic>&#x3b1;</italic> represents 1/width (dl/mg) of the sigmoid curve.</p>
<p>We combine the unknown parameters of the single compartment model in this vector &#x398;<sub>
<italic>s</italic>
</sub>:<disp-formula id="e3">
<mml:math id="m4">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>s</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>C</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msup>
<mml:mo>.</mml:mo>
</mml:math>
<label>(3)</label>
</disp-formula>
</p>
</sec>
<sec id="s2-4">
<title>2.2.2 Two Compartment Model</title>
<p>The two compartmental model, as shown in <xref ref-type="fig" rid="F2">Figure 2</xref> (Bottom), is comprised of two equations:<disp-formula id="e4a">
<mml:math id="m5">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>u</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>/</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
<label>(4a)</label>
</disp-formula>
<disp-formula id="e4b">
<mml:math id="m6">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>/</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
<label>(4b)</label>
</disp-formula>where <italic>x</italic>
<sub>
<italic>pj</italic>
</sub> and <italic>x</italic>
<sub>
<italic>ij</italic>
</sub> represent the insulin (or c-peptide) concentrations in the plasma (<italic>p</italic>) and interstitial (<italic>i</italic>) compartments; <italic>q</italic>
<sub>1</sub> and <italic>q</italic>
<sub>2</sub> represent the mass transport between these two compartments; <italic>&#x3c4;</italic>
<sub>
<italic>pj</italic>
</sub> and <italic>&#x3c4;</italic>
<sub>
<italic>ij</italic>
</sub> refer to the degradation time for insulin or c-peptide in the plasma and interstitial spaces. The values of <italic>q</italic>
<sub>1</sub> &#x3d; 0.0473 (min<sup>&#x2212;1</sup>) and <italic>q</italic>
<sub>2</sub> &#x3d; 0.0348 (min<sup>&#x2212;1</sup>) are adopted from the transport model of (<xref ref-type="bibr" rid="B7">Eaton et al., 1980</xref>). Alternatives to this model include the diffusive transport used, for example, in the ultradian model (<xref ref-type="bibr" rid="B27">Toli&#x107; et al., 2000</xref>). We combine the unknown parameters of the two compartment model in this vector &#x398;<sub>
<italic>m</italic>
</sub>:<disp-formula id="e5">
<mml:math id="m7">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>C</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msup>
</mml:math>
<label>(5)</label>
</disp-formula>
</p>
<p>Finally, we provide a summary for the two models given in <xref ref-type="disp-formula" rid="e1">Eq. 1</xref> and <xref ref-type="disp-formula" rid="e4a">Eq. 4</xref>, as follows:<list list-type="simple">
<list-item>
<p>&#x2022; The accumulation dynamics of the insulin and c-peptide use the same compartment models but with different parameters.</p>
</list-item>
<list-item>
<p>&#x2022; <italic>u</italic> uses the same function for both ISR and CSR, and this function depends only on the blood glucose values.</p>
</list-item>
<list-item>
<p>&#x2022; The function of <inline-formula id="inf2">
<mml:math id="m8">
<mml:mi>u</mml:mi>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> is given by a sigmoid <xref ref-type="disp-formula" rid="e2">Eq. 2</xref> as a function of interpolated (at 1&#xa0;min) blood glucose values <inline-formula id="inf3">
<mml:math id="m9">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula>, described in the next section.</p>
</list-item>
<list-item>
<p>&#x2022; The parameters of <italic>u</italic> (<italic>K</italic>
<sub>
<italic>m</italic>
</sub>, <italic>C</italic>
<sub>0</sub>, <italic>&#x3b1;</italic>), along with degradation time (<italic>&#x3c4;</italic>
<sub>
<italic>pj</italic>
</sub>, <italic>&#x3c4;</italic>
<sub>
<italic>ij</italic>
</sub>), are unknown and estimated independently from insulin and c-peptide measurements.</p>
</list-item>
</list>
</p>
</sec>
<sec id="s2-2-3">
<title>2.2.3 Compact Form Model</title>
<p>It is convenient and, as we&#x2019;ll show, computationally efficient to express these compartmental models in a compact state-space model form:<disp-formula id="e6a">
<mml:math id="m10">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mo>&#x3d;</mml:mo>
<mml:mi>A</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mi>x</mml:mi>
<mml:mo>&#x2b;</mml:mo>
<mml:mi>B</mml:mi>
<mml:mi>u</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
</mml:math>
<label>(6a)</label>
</disp-formula>
<disp-formula id="e6b">
<mml:math id="m11">
<mml:mi>y</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mi>C</mml:mi>
<mml:mi>x</mml:mi>
</mml:math>
<label>(6b)</label>
</disp-formula>where <italic>x</italic>, <italic>A</italic>, <italic>B</italic>, <italic>C</italic>, and <bold>&#x398;</bold> are specific model state and parameters. For the single compartment model (2), we have <italic>x</italic> &#x3d; <italic>x</italic>
<sub>
<italic>pj</italic>
</sub>, <italic>A</italic> &#x3d; 1/<italic>&#x3c4;</italic>
<sub>
<italic>pj</italic>
</sub>, <italic>B</italic> &#x3d; 1, <italic>C</italic> &#x3d; 1, and <bold>&#x398;</bold> &#x3d; <bold>&#x398;</bold>
<sub>
<italic>s</italic>
</sub>, which is defined in <xref ref-type="disp-formula" rid="e3">Eq. 3</xref>. For the two compartment model (4), we have <inline-formula id="inf4">
<mml:math id="m12">
<mml:mi>x</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
</mml:mrow>
<mml:mrow>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msup>
</mml:math>
</inline-formula>,<disp-formula id="e7">
<mml:math id="m13">
<mml:mi>A</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:mtable class="matrix">
<mml:mtr>
<mml:mtd columnalign="center">
<mml:mo>&#x2212;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>/</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
</mml:mtd>
<mml:mtd columnalign="center">
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mtd>
</mml:mtr>
<mml:mtr>
<mml:mtd columnalign="center">
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mtd>
<mml:mtd columnalign="center">
<mml:mo>&#x2212;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>/</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mi>j</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
</mml:mtd>
</mml:mtr>
</mml:mtable>
</mml:mrow>
</mml:mfenced>
</mml:math>
<label>(7)</label>
</disp-formula>
<italic>B</italic> &#x3d; [1,0]<sup>
<italic>T</italic>
</sup>, <italic>C</italic> &#x3d; [1, 0], and <bold>&#x398;</bold> &#x3d; <bold>&#x398;</bold>
<sub>
<italic>m</italic>
</sub> defined in <xref ref-type="disp-formula" rid="e5">Eq. 5</xref>.</p>
<p>Since we use discrete-time data, the state space model, (6), is discretized at a sampling rate of <italic>T</italic>
<sub>
<italic>s</italic>
</sub> &#x3d; 0.1&#xa0;min and then given by<disp-formula id="e8a">
<mml:math id="m14">
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
<mml:mo>&#x2b;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mspace width="0.28em"/>
<mml:mi>&#x3a6;</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:mi mathvariant="normal">&#x393;</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:msub>
<mml:mrow>
<mml:mi>u</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
<mml:mo>,</mml:mo>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:mrow>
</mml:mfenced>
</mml:math>
<label>(8a)</label>
</disp-formula>
<disp-formula id="e8b">
<mml:math id="m15">
<mml:msub>
<mml:mrow>
<mml:mi>y</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mspace width="0.28em"/>
<mml:mi>C</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
<label>(8b)</label>
</disp-formula>where <italic>&#x3a6;</italic> &#x3d; <italic>e</italic>
<sup>
<italic>AT</italic>
</sup> and <inline-formula id="inf5">
<mml:math id="m16">
<mml:mi mathvariant="normal">&#x393;</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:msup>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
<mml:mi>T</mml:mi>
<mml:mi>s</mml:mi>
</mml:mrow>
</mml:msup>
<mml:mi>d</mml:mi>
<mml:mi>s</mml:mi>
<mml:mi>B</mml:mi>
</mml:math>
</inline-formula>. The input <italic>u</italic>
<sub>
<italic>k</italic>
</sub> is the ISR or CSR, which is a function of both <bold>&#x398;</bold> and the interpolated glucose values <inline-formula id="inf6">
<mml:math id="m17">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> generated from cubic interpolation method.</p>
</sec>
</sec>
<sec id="s3">
<title>3 Results</title>
<p>The main contribution of this paper is the development of a new estimation approach to infer the ISR from data. The uncertainty in the estimation is studied based on random initial conditions used with the proposed approach to optimize the unknown parameters.</p>
<sec id="s3-1">
<title>3.1 The Estimation Algorithm</title>
<p>Our new estimation method utilizes the above state space model, (8), and is based on the nonlinear least square method (<xref ref-type="bibr" rid="B12">Hansen et al., 2013</xref>) to optimize parameters that provide the best fit between the model&#x2019;s output (blood insulin or c-peptide) and data. The proposed algorithm uses interpolated blood glucose values as an input to the algorithm.</p>
<p>In practice, the time intervals of the measured blood glucose varies between 10 and 30&#xa0;min, and are assumed to sufficiently cover shape of the glucose dynamics. This allows us to interpolate the glucose dynamics in order to resample the glucose values with sufficient time resolution to integrate the insulin or c-peptide dynamics, for which these measured time intervals are too long (sparse). We use cubic interpolation to resample the blood glucose values between the actual measurements to generate an interpolated glucose trajectory <inline-formula id="inf7">
<mml:math id="m18">
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> with a time step <italic>T</italic> &#x3d; 1&#xa0;min. This input glucose trajectory is used within the ISR or CSR function <inline-formula id="inf8">
<mml:math id="m19">
<mml:mi>u</mml:mi>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mi mathvariant="normal">&#x398;</mml:mi>
<mml:mo>,</mml:mo>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> to integrate the model forward generating a model insulin or c-peptide trajectory <italic>y</italic> (<bold>&#x398;</bold>, <italic>t</italic>). We take values from this trajectory at <italic>t</italic>
<sub>
<italic>k</italic>
</sub>, which are the times of the actual insulin or c-peptide measurements, and use them in the algorithm to optimize the parameters.</p>
<p>For given measurements of glucose and blood insulin or c-peptide: <italic>z</italic> (1), <italic>z</italic> (2), &#x2026;, <italic>z</italic>(<italic>n</italic>), we minimize following least squares objective function <italic>J</italic>(<bold>&#x398;</bold>) to obtain <inline-formula id="inf9">
<mml:math id="m20">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi mathvariant="normal">&#x398;</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">&#x302;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula>:<disp-formula id="e9">
<mml:math id="m21">
<mml:mi>J</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x3d;</mml:mo>
<mml:munderover accentunder="false" accent="false">
<mml:mrow>
<mml:mo>&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>N</mml:mi>
</mml:mrow>
</mml:munderover>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>z</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>y</mml:mi>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
<mml:mo>,</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msup>
</mml:math>
<label>(9)</label>
</disp-formula>where <italic>y</italic> (<bold>&#x398;</bold>, <italic>t</italic>
<sub>
<italic>k</italic>
</sub>) is the model output (blood insulin or c-peptide) generated by <inline-formula id="inf10">
<mml:math id="m22">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>g</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula>, and <italic>z</italic>(<italic>k</italic>) is a measured insulin or c-peptide value. Note that insulin and c-peptide are optimized independently. In <xref ref-type="fig" rid="F3">Figure 3</xref>, we provide a schematic representation for our <xref ref-type="other" rid="alg1">Algorithm 1</xref>. The algorithm consists of two nested loops: the outer one loops over a random set of initial conditions {<bold>&#x398;</bold>
<sub>
<italic>n</italic>,0</sub>}, and the inner loop is based on the Levenberg-Marquardt method where the value &#x398;<sub>
<italic>n</italic>
</sub> is updated on the <italic>i</italic>th cycle by &#x398;<sub>
<italic>n</italic>,<italic>i</italic>&#x2b;1</sub> &#x3d; &#x398;<sub>
<italic>n</italic>,<italic>i</italic>
</sub> &#x2212; &#x2207;<sub>
<italic>n</italic>,<italic>i</italic>
</sub> where &#x2207;<sub>
<italic>n</italic>,<italic>i</italic>
</sub> uses the steepest descent method (<xref ref-type="bibr" rid="B19">Marquadt, 1963</xref>; <xref ref-type="bibr" rid="B10">Levenberg, 1944</xref>). We use the MATLAB function &#x2018;lsqcurvefit&#x2019; to implement this inner loop.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Schematic representation for the estimation algorithm.</p>
</caption>
<graphic xlink:href="fphys-13-893862-g003.tif"/>
</fig>
</sec>
<sec id="s3-1-1">
<title>3.1.1 Uncertainty Quantification</title>
<p>The method as described is a nonlinear optimization process. It is not known or proven that for this process there is either a global minimum, or only one local minimum, of the objective function (<xref ref-type="disp-formula" rid="e9">Eq. 9</xref>). Therefore there is potential sensitivity to the initial conditions (initial guess for <bold>&#x398;</bold>). To address this, and to provide uncertainty quantification for the inferred parameterization, we adopt a bootstrap method.</p>
<p>We therefore explore the distribution of inferred parameters <inline-formula id="inf11">
<mml:math id="m23">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">&#x302;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> from a large (1,000) randomly sampled initial conditions drawn from a range of allowed parameters defined within physiologically plausible ranges. In this analysis, <italic>&#x3c4;</italic>
<sub>
<italic>px</italic>
</sub> &#x2208; [10, 180] min, <italic>C</italic>
<sub>0</sub> &#x2208; [200, 1,500] mg/L, <italic>K</italic>
<sub>
<italic>m</italic>
</sub> &#x2208; [1, 350] mU/l/min, and <italic>&#x3b1;</italic> &#x2208; [0.015, 0.045] L/mg.</p>
<p>For each initial parameter <bold>&#x398;</bold>
<sub>
<bold>0</bold>
</sub> the algorithm seeks a final parameter <bold>&#x398;</bold>
<sub>
<italic>f</italic>
</sub> that minimizes <italic>J</italic> (<xref ref-type="disp-formula" rid="e9">Eq. 9</xref>) within the boundaries. If the minimization process reaches the allowed boundaries, the result is excluded.</p>
<p>Each solution in <bold>&#x398;</bold>
<sub>
<bold>
<italic>f</italic>
</bold>
</sub> is used within the ISR/CSR function to simulate ISR and CSR trajectories and then generate plasma insulin and c-peptide trajectories by integrating the model, (8), forward using the interpolated glucose values as an input. Finally, we use these trajectories to compute the average and standard deviation (Mean &#xb1; SD). These steps are illustrated in <xref ref-type="other" rid="alg1">Algorithm 1</xref>.</p>
<p>
<statement content-type="algorithm" id="alg1">
<p> <inline-graphic xlink:href="fphys-13-893862-fx1.tif"/>
</p>
</statement>
</p>
</sec>
<sec id="s3-2">
<title>3.2 Computational Method Validation</title>
<p>We validate the inference method by applying the algorithm to model-generated data sets. We then compare the inferred ISR parametrization, and decay constant, to the model parameters used to generate the data.</p>
<p>Data sets were generated with the model described in <xref ref-type="bibr" rid="B17">Liu et al. (2009)</xref>, with the published parameters unless otherwise noted. The ISR used matched the functional form in <xref ref-type="disp-formula" rid="e2">Eq. 2</xref>, with parameters <italic>K</italic>
<sub>
<italic>m</italic>
</sub> &#x3d; 0.6 (mU/l/min), <italic>C</italic>
<sub>0</sub> &#x3d; 1,000 (mg/L), <italic>&#x3b1;</italic> &#x3d; 0.01 (L/min). Data sets were generated for each of the following insulin degradation rates <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> &#x2208; {10, 15, 30, 60, 90, 120} min. The model was driven with an OGGT type feeding function, glucose and insulin values sampled at discrete times <italic>T</italic>
<sub>
<italic>i</italic>
</sub> &#x2208; { &#x2212; 10, 0, 10, 20, 30, 60, 90, 120, 150, 180} min, and 20% random noise was added.</p>
<p>The inferred values of <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> matched the ideal (generating) values within 1.8% (i.e., &#x7c;<italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>,<italic>i</italic>
</sub> &#x2212; <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub>&#x7c;/<italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> &#x3c; 1.8%), and the other parameters (<italic>K</italic>
<sub>
<italic>m</italic>
</sub>, <italic>C</italic>
<sub>0</sub>, <italic>&#x3b1;</italic>) within a roughly average error of 1.2% of the generating parameter value.</p>
<p>We note that we achieved a very high level of accuracy in inference of these parameters almost independent of how sparsely the data was sampled with respect to the insulin dynamics (<italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub>, and robust to the presence of significant (20%) added measurement noise.</p>
</sec>
<sec id="s3-3">
<title>3.3 Application to Oral Glucose Tolerance Test Data</title>
<p>We use this method with clinically measured OGTT data, including plasma glucose, insulin, and c-peptide measurements, to parametrize the ISR/CSR functions <inline-formula id="inf19">
<mml:math id="m31">
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">&#x302;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>.</p>
<p>These measurements are taken from normal and CFRD subjects at times <italic>t</italic>
<sub>
<italic>i</italic>
</sub> &#x3d; { &#x2212; 10, 0, 20, 30, 60, 90, 120, 150, 180} min. The glucose values are interpolated at 1&#xa0;min intervals using cubic interpolation and then used as an input for estimation, and as described <inline-formula id="inf20">
<mml:math id="m32">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi mathvariant="bold">&#x398;</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">&#x302;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> is the mean parameters over minimizations of the cost function <italic>J</italic>(<bold>&#x398;</bold>) (<xref ref-type="disp-formula" rid="e9">Eq. 9</xref>).</p>
<p>Given that insulin and c-peptide are secreted in a 1:1&#xa0;M ratio (<xref ref-type="bibr" rid="B15">Lebowitz and Blumenthal, 1993</xref>), we expect that the parametrized functionals ISR and CSR should follow a similar linear relationship. Note that in the presented units for ISR (<italic>&#x3bc;</italic> U/ml-min) and CSR (ng/ml-min), a 1:1&#xa0;M ratio corresponds to 0.056 &#x3d; ng/<italic>&#x3bc;</italic> U. We therefore also fit the relation between CSR and ISR with a linear fit to get <inline-formula id="inf21">
<mml:math id="m33">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>C</mml:mi>
<mml:mi>S</mml:mi>
<mml:mi>R</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mi>I</mml:mi>
<mml:mi>S</mml:mi>
<mml:mi>R</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>.</p>
<p>Shown in <xref ref-type="fig" rid="F4">Figure 4</xref> are stereotypical results for control (upper group) and CFRD subjects (lower panels). The actual glucose measurements (blue circles) and interpolated glucose (magenta), used as an input to the algorithm, are shown in the <xref ref-type="fig" rid="F4">Figure 4A</xref>. Also, the measured c-peptide (red circles) and estimated c-peptide (magenta with standard deviation (&#xb1;SD) black, green) are presented in the <xref ref-type="fig" rid="F4">Figure 4B</xref>. Histograms of the inferred degradation times are shown for both c-peptide (<xref ref-type="fig" rid="F4">Figure 4C</xref>) and insulin (<xref ref-type="fig" rid="F4">Figure 4D</xref>). Measured insulin (red circles) and estimated insulin (magenta) are shown (with &#xb1;SD black, green) in the <xref ref-type="fig" rid="F4">Figure 4E</xref>. Estimated ISR and CSR are presented with &#xb1;SD (black, green) are shown in the <xref ref-type="fig" rid="F4">Figures 4F,G</xref> for the time points at which data was taken.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Estimation results, using the algorithm with the single compartment model, for a single control (Top) and a single CFDR (Bottom) subject. Each composite includes <bold>(A)</bold> glucose measurements (blue circles) and the interpolated glucose (magenta line) used as model input <bold>(B)</bold> measured c-peptide (circles) and model-generated mean c-peptide (magenta line) and &#xb1;standard deviation (black, green lines); histograms of inferred degradation time for c-peptide <bold>(C)</bold> and insulin <bold>(D)</bold>; <bold>(E)</bold> measured insulin (red circles) and estimated insulin trajectory (magenta with &#xb1;SD black, green); mean inferred ISR <bold>(F)</bold> and CSR <bold>(G)</bold> (red with SD black, green); and <bold>(H)</bold> CSR/ISR relationship.</p>
</caption>
<graphic xlink:href="fphys-13-893862-g004.tif"/>
</fig>
<p>In both examples, the relationship between CSR and ISR closely matches a linear fit, with slope of order the expected value of 0.056 &#x3d; ng/<italic>&#x3bc;</italic>U.</p>
</sec>
<sec id="s3-3-1">
<title>3.3.1 Quantification of Goodness of Fit</title>
<p>We quantify the goodness of fit of three different features of these fits the measured values; how well the trajectory of the modeled insulin (<italic>I</italic> (<italic>t</italic>&#x7c;<bold>&#x398;</bold>)) fits the measured values, how well the trajectory of the modeled c-peptide (<italic>C</italic> (<italic>t</italic>&#x7c;<bold>&#x398;</bold>) fits the measured c-peptide values; and goodness of the linear fit between the CSR and ISR, <inline-formula id="inf22">
<mml:math id="m34">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>C</mml:mi>
<mml:mi>S</mml:mi>
<mml:mi>R</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mi>I</mml:mi>
<mml:mi>S</mml:mi>
<mml:mi>R</mml:mi>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>. In each of these cases, we use normalized root-mean-square (RMS) errors:<disp-formula id="e10a">
<mml:math id="m35">
<mml:mi>R</mml:mi>
<mml:mi>M</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>I</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>I</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:mfrac>
<mml:msqrt>
<mml:mrow>
<mml:munder>
<mml:mrow>
<mml:mo>&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:munder>
<mml:mfenced open="(" close="">
</mml:mfenced>
<mml:msub>
<mml:mrow>
<mml:mi>I</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>I</mml:mi>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>k</mml:mi>
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<label>(10c)</label>
</disp-formula>where <inline-formula id="inf23">
<mml:math id="m38">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>I</mml:mi>
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<mml:mrow>
<mml:mi>k</mml:mi>
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</inline-formula> is the mean of the measured insulin values, <inline-formula id="inf24">
<mml:math id="m39">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
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</inline-formula> is the mean of the measured c-peptide values, and <italic>CSR</italic>
<sub>
<italic>k</italic>,&#x2009;max</sub> is the maximum CSR value.</p>
<p>Estimation results are obtained and evaluated for all control and CFDR subjects. Based on the goodness of fit values (<xref ref-type="disp-formula" rid="e10a">Eq. 10</xref>), our algorithm achieved relatively good estimates of ISR and CSR for 12 of 17 (71%) control subjects and 7 of 9 (78%) CFRD subjects. Error estimates are shown in <xref ref-type="fig" rid="F5">Figure 5</xref> plotted for the output for each of the control subjects (filled circles). As can be seen in the left panel, four subjects had very high RMS error in reconstruction of both insulin trajectories (red). In addition, at least one subject&#x2019;s fit had especially poor linear relationship between CSR and ISR (blue).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Goodness of Fits for normal subjects. Red points indicate have relatively poor reconstruction of insulin measurements, and the blue point has relatively poor linear relation between CSR and ISR. These metrics for these poor reconstructions are all improved (green points) when the data point at 60&#xa0;min is left out.</p>
</caption>
<graphic xlink:href="fphys-13-893862-g005.tif"/>
</fig>
</sec>
<sec id="s3-3-2">
<title>3.3.2 Identification of Potential Outlier Data Points</title>
<p>We hypothesize that for these data sets, approximately 30% of the subjects&#x2019; data have at least one outlier data point that is sufficient to corrupt the inference. Such outliers would also interfere with clinical diagnostics, and therefore the ability to identify and correct for these outliers would be a substantial gain.</p>
<p>In the five poorly estimated control subjects, we observed glucose values that had rather severe dip at 60&#xa0;min, and then a recovery to a middle value, as illustrated in <xref ref-type="fig" rid="F6">Figure 6A</xref>, which we suspect may be in error.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Improvement for the estimation results of plasma insulin (<bold>(D)</bold> versus <bold>(C)</bold>), c-peptide (<bold>(F)</bold> versus <bold>(E)</bold>), and slope (<bold>(H)</bold> versus <bold>(G)</bold>) by removing the uncertain blood glucose value at 60&#xa0;min <bold>(A)</bold>, and using the interpolated glucose values in the gap between the glucose values at 30, 90&#xa0;min <bold>(B)</bold>.</p>
</caption>
<graphic xlink:href="fphys-13-893862-g006.tif"/>
</fig>
<p>To test our interpretation for poor estimates, we consider one control subject with an uncertain glucose measurement that dropped at 60 min, from 140&#xa0;mg/dl to 85&#xa0;mg/dl. We then removed this 60&#xa0;min glucose value and the associated insulin and c-peptide measurements. Since we use glucose interpolation as an input to the model, the gap between the glucose values between 30 and 90&#xa0;min is filled by the interpolated glucose values, as shown in <xref ref-type="fig" rid="F6">Figures 6A,B</xref>. Without the value at 60min, the insulin and c-peptide measurements are used to re-estimate the parameters. As shown in (D, F), the computed insulin and c-peptide trajectories better match the residual measured values, and the relationship between CSR and ISR is better fit by a line (H).</p>
<p>Quantitatively, all three of the RMS errors improved for this subject, as did the errors for all five subjects whose fits were previously identified as having high error. The improvement is illustrated by the green diamonds in <xref ref-type="fig" rid="F5">Figure 5</xref>. The green lines link the improved error values with the error values prior to this analysis.</p>
<p>In contrast, for all other subjects, if the same 60&#xa0;min time point was left out the errors did not significantly degrade.</p>
<p>Note that the objective function (<xref ref-type="disp-formula" rid="e9">Eq. 9</xref>) that is minimized with the optimization is only sensitive to the model reconstructed values at the measured times. The model dynamics (insulin or c-peptide accumulation) are substantially only sensitive to the ISR or CSR within approximately one degradation time constant (<italic>&#x3c4;</italic>
<sub>
<italic>x</italic>
</sub>), which for controls is of order 15&#xa0;min. Therefore the optimization is primarily sensitive to the interpolated glucose trajectory <inline-formula id="inf25">
<mml:math id="m40">
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
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<sub>
<italic>x</italic>
</sub> ahead of measured data points. This means that as long as the measurements sufficiently sample the glucose dynamics, this method should be robust to dropping out individual data points.</p>
<p>This suggests that the poor estimate comes from the data, not the method.</p>
<p>In contrast, for in the two poorly estimated CFRD subjects, the glucose value dramatically increased to greater than 250&#xa0;mg/dl within 40&#xa0;min. This sharp increase in glucose level reduces the amount of time at intermediate glucose levels. As a consequence, it makes estimating ISR difficult at those intermediate values.</p>
</sec>
<sec id="s3-3-3">
<title>3.3.3 Inferred Parameters</title>
<p>In <xref ref-type="table" rid="T1">Table 1</xref>, we provide a summary for the 12 normal and 7 CFRD subjects who were estimated well, including the ISR average values of the estimated parameters presented by the mean and 95% confident interval, slope, and the ISR evaluated at the glucose value of 140&#xa0;mg/dl. Note that only 9 of 13 control subjects have peak glucose values that reached 140&#xa0;mg/dl, whereas all of the 7 CFRD had blood glucose of 140&#xa0;mg/dl or greater.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>A summary for the normal and CFRD subjects, including the ISR average values of the estimated parameters, presented by the mean and 95% confident interval, slope, and the ISR evaluated at the glucose value of 140&#xa0;mg/dl.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Parameter</th>
<th align="center">
<italic>&#x3c4;</italic>
<sub>
<italic>PI</italic>
</sub>
</th>
<th align="center">
<italic>K</italic>
<sub>
<italic>m</italic>
</sub>
</th>
<th align="center">
<italic>C</italic>
<sub>0</sub>
</th>
<th align="center">
<italic>&#x3b1;</italic>
</th>
<th align="center">Slope</th>
<th align="center">ISR(140&#xa0;mg/dl)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Control Subject</td>
<td align="char" char="plusmn">15 &#xb1; 5</td>
<td align="char" char="plusmn">123 &#xb1; 57</td>
<td align="char" char="plusmn">209 &#xb1; 39</td>
<td align="char" char="plusmn">0.06 &#xb1; 0.02</td>
<td align="char" char="plusmn">0.06 &#xb1; 0.01</td>
<td align="char" char="plusmn">128 &#xb1; 57</td>
</tr>
<tr>
<td align="left">CFDR Subject</td>
<td align="char" char="plusmn">28 &#xb1; 12</td>
<td align="char" char="plusmn">75 &#xb1; 60</td>
<td align="char" char="plusmn">600 &#xb1; 240</td>
<td align="char" char="plusmn">0.014 &#xb1; 0.01</td>
<td align="char" char="plusmn">0.14 &#xb1; 0.06</td>
<td align="char" char="plusmn">73 &#xb1; 60</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>As a final external validation of the method, we were able to differentiate CFRD from normal patients in two ways. First, as shown in <xref ref-type="table" rid="T1">Table 1</xref>, the ISR at a glucose of 140&#xa0;mg/dl is higher for the control subjects than the CFRD subjects. This result indicates the ability of the beta-cells for healthy subjects to produce more insulin to mitigate the increased glucose level. Second, the estimated <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> for CFRD subjects is larger than the control subjects, as shown in <xref ref-type="table" rid="T1">Table 1</xref>. This result reflects physiological insights for CFRD that insulin takes a longer time to accumulate and reach a high value than in the control subjects, due to Lower production in beta cells and lower peripheral degradation rate. Therefore, the increased glucose values in CFRD subjects provide better dynamics for estimation that allows the algorithm to estimate <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> more precisely.</p>
<p>The peak of the ISR can be estimated if the glucose range is wide, e.g., 100&#x2013;350&#xa0;mg/dl. However, in a short glucose range of 100&#x2013;140&#xa0;mg/dl, accurate estimation of the peak is not guaranteed. This observation means it is more likely for CFRD subjects to capture the ISR peak than the control subjects due to the high glucose range in these individuals. We found that two CFRD subjects from among the CFRD group had a glucose range that allowed us to estimate the ISR peak and hence the full ISR functional shape. In these two CFRD subjects, the blood glucose range is between 100&#x2013;400&#xa0;mg/dl. On the other hand, the blood glucose range for control subjects is between 95&#x2013;140&#xa0;mg/dl, which makes estimating the ISR peak hard to achieve. However, we found only one control subject that the ISR peak was nearly estimated. The glucose range in this control subject is between 95&#x2013;180&#xa0;mg/dl. Therefore, we conclude that the peak of the ISR can be better estimated for CFRD subjects, in which the range of blood glucose is wide.</p>
<p>To compare the normal and CFRD subjects, we evaluated the estimated ISR at the glucose value of 140&#xa0;mg/dl for subjects with good estimation in the two groups. After removing the poorly fitted subjects and the control subjects that had not reached the glucose value of 140&#xa0;mg/dl, we obtained 12 control subjects and 7 CFRD subjects out of 17 and 9 subjects, respectively. The results are presented using the empirical cumulative distribution function (ECDF), in <xref ref-type="fig" rid="F7">Figures 7A,B</xref>. Therefore, we found that the ISR values of the normal subjects were with 50% that the ISR exceeds the rate of 100 <italic>&#x3bc;</italic>U/ml/min. Whereas, the CFRD subjects were with 50% that the associated ISR value around 15 <italic>&#x3bc;</italic>U/ml/min. These results indicate that the pancreatic beta-cell of the CFRD cannot produce enough insulin due to the dysfunction of these beta-cells. On the other hand, these beta-cells can produce more insulin at the value of glucose (140&#xa0;mg/dl) in normal subjects.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>A comparison between the normal and CFRD subjects, using the probability of empirical cumulative distribution function (ECDF), for the ISR value <bold>(A,B)</bold> evaluated at the glucose value of 140&#xa0;mg/dl (horizontal) and the slope between ISR and CSR <bold>(C,D)</bold>, the vertical axis is the probability (ECDF); the expected value is 0.056 for the slope (red line <bold>(C,D)</bold>).</p>
</caption>
<graphic xlink:href="fphys-13-893862-g007.tif"/>
</fig>
<p>The estimated slope between the estimated ISR and CSR was also used to characterize these two groups. The slope (CSR/ISR) between the estimated CSR and ISR for both normal and CFRD subjects was plotted in <xref ref-type="fig" rid="F7">Figures 7C,D</xref>, as ECDF. In both control and CFRD subjects we observed a straight line describing the physiological relationship between ISR and CSR. The slope is in the unit of ng/<italic>&#x3bc;</italic>U. When both units are converted to moles, the expected conversion factor is 0.056. In <xref ref-type="fig" rid="F7">Figures 7C,D</xref>, we plotted this value (0.056) as a vertical (dashed-red) line to illustrate how these slopes, which are predictions of the expected value 0.056, are close to this expected value. As shown in <xref ref-type="fig" rid="F7">Figure 7C</xref>, the predicted slope of the control subjects was around the expected value of 0.056. On the other hand, the wide glucose range in the CFRD subjects used to estimate both ISR and CSR, which gives more information to estimate ISR and CSR trajectories (e.g., ISR secretion and peak regions), increased the uncertainty in the estimated slope, as shown in <xref ref-type="fig" rid="F7">Figure 7D</xref>.</p>
</sec>
<sec id="s3-3-4">
<title>3.3.4 Two-Compartment Model</title>
<p>Note that the above fits and figures were obtained using the single-compartment model. However, comparable results can be obtained when incorporating the two-compartment model with the algorithm. But, it is a significant to note that, when the single model cannot estimate the patient&#x2019;s ISR and CSR, adding a second compartment is not helpful. For a comparison between the two models, the ISR was evaluated at the glucose value of 140&#xa0;mg/dl, and the slope between ISR and CSR was estimated, for control subjects, using our algorithm incorporating the two models. Therefore, shifting to the two-compartment model, the control subjects&#x2019; data gives a fraction difference of absolute mean error for the ISR at glucose value of 140&#xa0;mg/dl provided by (Mean &#xb1; SD) 0.32 &#xb1; 0.2. In contrast, the fraction difference of the absolute average error of the slope is given by 0.14 &#xb1; 0.15. These results indicate that adding more compartments and unknown parameters is unnecessary to estimate reliable ISR. Instead, a simple model can be incorporated with our method to estimate ISR for people with different beta-cell functions.</p>
</sec>
</sec>
<sec id="s4">
<title>4 Discussion</title>
<p>We developed a new estimation approach for inferring the ISR from plasma insulin and c-peptide measurements. We validated this method with synthetic data and nominal physiological parameters and were able to reconstruct these values from generated ground truth data with 20% noise is added to each data point for both plasma glucose and insulin. Then the algorithm was applied to OGTT clinical data for both control and CFRD subjects. We use the estimated slope between ISR and CSR to evaluate the estimation for both normal and CFRD groups, as well as the RMS between the observations and the model-estimated values.</p>
<p>We hypothesize that to estimate ISR, it is not necessary to use an OGTT, IVGTT, or other glucose tolerance test. Instead, it can be estimated by knowing glucose values and a nonlinear function of the secretion rate with unknown parameters. Therefore, we specifically implemented a sigmoid function to model the ISR and CSR and then estimate them independently from insulin and c-peptide data. The ISR peak can be estimated, using this function, if the glucose value is high enough to capture the peak. Using our method, we expect to estimate the baseline of the secretion rates if we have more sampled data, especially at the beginning of the test.</p>
<sec id="s4-1">
<title>4.1 Validation</title>
<p>Our validation test uses the equal molar ratio between plasma insulin and c-peptide secretion rates. Even though the CFRD and control subjects have different physiology and the ISR and CSR have various physiological parameters and nonlinear relations with plasma glucose concentration, our algorithm recovers the linear relationship between ISR and CSR for both groups. This result indicates the accuracy of the estimation of the algorithm. Another test uses the normalized root-mean-square (RMS) error between the estimation and the measured values. We showed that the estimation, in the two groups, in which the relationship between ISR and CSR is linear, the RMS error between modeled insulin or c-peptide and estimated ones is small. This observation reflects the consistency in our results showed by these two validation tests used in our method.</p>
</sec>
<sec id="s4-2">
<title>4.2 Phenotype</title>
<p>We were able to differentiate the normal and CFRD diabetes phenotypes. We show that the ISR for individuals with CFRD is statistically significantly lower than the ISR for individuals&#x2019; normal glucose regulatory systems (see <xref ref-type="table" rid="T1">Table 1</xref>). However, the ISR peak for the two groups did not differentiate them because the peak ISR was often not observable or computable for normal patients. In addition, due to the high glucose dynamics and slow insulin accumulation in the CFRD subjects, which reveals more information about the insulin degradation time (<italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub>), the estimated <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> was larger in this group than the control subjects.</p>
</sec>
<sec id="s4-3">
<title>4.3 Identifying Potentially Erroneous Data Points and Improving Reliability</title>
<p>As shown in <xref ref-type="sec" rid="s3-3-2">Section 3.3.2</xref>, this inference method may be able to identify erroneous data points. In the example shown (<xref ref-type="fig" rid="F6">Figure 6</xref>, and green point in <xref ref-type="fig" rid="F5">Figure 5</xref>), such identification leverages three separate components: the goodness of fit of the insulin trajectory, the goodness of fit of c-peptide trajectory, and the linear relationship between ISR and CSR. Because both ISR and CSR are inferred independently, these three are independent measures.</p>
<p>The inference relies on the physiological knowledge that ISR is primarily a function of plasma glucose concentration, and the linear relation embodies the physiological fact that c-peptide and insulin are released in a 1:1 molecular ratio. Such use of external knowledge - that ISR is primarily a function of plasma glucose, and that CSR is proportional to ISR - is a simple and principled pathway to identifying data errors.</p>
<p>We note also that because the underlying model for plasma insulin or c-peptide accumulation includes a degradation time that appears to be in the range of <italic>&#x3c4;</italic>
<sub>
<italic>I</italic>
</sub> 5&#x2013;15&#xa0;min, the model is in effect only dependent on the interpolated glucose values within <italic>&#x3c4;</italic>
<sub>
<italic>I</italic>
</sub> or <italic>&#x3c4;</italic>
<sub>
<italic>C</italic>
</sub> ahead of each data point, and for the distally separated points residual after removal of the point at 60&#xa0;min, this time is relatively small.</p>
<p>If proven reliable in future studies, we anticipate that such analysis - and removal of erroneous points - could make clinical testing more reliable by increasing the amount of diagnostic information that can be extracted from a single diagnostic test, and decrease the need for multiple diagnostic tests using model-based inference. Currently, the ADA recommends four pathways for diagnosing pre-diabetes and type-2 diabetes, one of which includes an OGTT (<xref ref-type="bibr" rid="B5">Davidson et al., 2021b</xref>). Similarly, the recommendation to diagnose gestational diabetes is via a GTT or OGTT (<xref ref-type="bibr" rid="B6">Davidson et al., 2021a</xref>). In both cases, a diagnosis requires two tests. By using inference paired with the information in the dynamics of the OGTT rather than a single value, we suspect it would be possible, as we show in this work (<xref ref-type="fig" rid="F6">Figure 6</xref>), to remove inaccurate outliers and accurately estimate ISR and other diagnostic quantities. If corroborated with further studies, this should motivate quantification of <italic>both insulin and c-peptide</italic> from blood draws during such clinical measures.</p>
</sec>
<sec id="s4-4">
<title>4.4 Inferring Pancreatic Health</title>
<p>Additionally, the model provides a platform for extracting additional information. For example, here we estimate the entire ISR curve, increasing accuracy and explainability of the context of the patient state, leading to quantified information regarding how much of the ISR was observed for observed glucose levels and how much excess capacity for insulin production the patient may have, leading to more accurate diagnosis of the patient&#x2019;s endocrine state.</p>
<p>Considering the above results and discussion, we now have a suitable method with physiological insights about estimating ISR for subjects with different physiological conditions. Furthermore, we showed that using a simple model is good enough to estimate ISR rather than a more complex model with more compartments and unknown parameters. Moreover, we found that using the two compartment, when the single compartment failed to estimate the ISR and CSR correctly, is not useful. These results allow us to implement the estimated ISR function into glucose models with various fidelity and complicity to understand better the glucose regulation system for patients with different pancreatic beta-cell functions.</p>
</sec>
<sec id="s4-5">
<title>4.5 Hepatic Insulin Degradation</title>
<p>We note that in this modeling we have lumped all insulin and c-peptide degradation to a general degradation rate, and have not tried to differentiate hepatic degradation or its effects. In the ISR literature (i.e., <xref ref-type="bibr" rid="B32">Watanabe et al., 1998</xref>; <xref ref-type="bibr" rid="B31">Watanabe and Bergman, 2000</xref>), such efforts are motivated because the pancratic beta-cells secrete insulin and c-peptide into the portal vein blood stream. The portal vein then passes through the liver and some insulin (up to 80%) is immediately degraded by the hepatocrytes (<xref ref-type="bibr" rid="B21">Najjar and Perdomo, 2019</xref>). If this process were simply proportional to plasma insulin concentration, then the one-compartment model for insulin would be modified to:<disp-formula id="e11">
<mml:math id="m42">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>u</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>h</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x2212;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3ba;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b2;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>o</mml:mi>
<mml:mi>r</mml:mi>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>h</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
<mml:msub>
<mml:mrow>
<mml:mi>x</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
<label>(11)</label>
</disp-formula>
</p>
<p>Here <italic>u</italic>
<sub>
<italic>i</italic>,<italic>p</italic>
</sub> is the ISR at the pancrease into the portal vein, <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> is the absorption proportionality <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> &#x2208; (0 : 1), and <italic>&#x3b2;</italic>
<sub>
<italic>port</italic>
</sub> is the ratio of the portal blood flow rate to the total blood volume, which for adult humans <italic>&#x3b2;</italic>
<sub>
<italic>port</italic>
</sub> &#x2208; (0.15&#x2013;0.4)/s. Likewise, <italic>&#x3ba;</italic>
<sub>
<italic>i</italic>
</sub> is the degradation proportionality due to other processes. The addition to the standard degradation rate comes because the liver cannot distinguish between freshly secreted insulin and circulating insulin.</p>
<p>For the work as described, the ISR inferred is effectively the rate of insulin secretion into the circulation system following transit through the liver, i.e., <italic>u</italic>
<sub>
<italic>i</italic>,<italic>inferred</italic>
</sub> &#x3d; <italic>u</italic>
<sub>
<italic>i</italic>,<italic>p</italic>
</sub>(<italic>t</italic>) (1 &#x2212; <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub>). Because c-peptide is not primarily degraded in the liver, this correction factor doesn&#x2019;t apply. Therefore in cases where both insulin and c-peptide are measured, the slope of the linear relation between parametrized CSR and ISR should be equal to 1/(1 &#x2212; <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub>) (after unit conversion to molar units). For normal subjects, the majority of subjects therefore had hepatic absorption ratios of <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> &#x3c; 0.4 (<xref ref-type="fig" rid="F7">Figure 7C</xref>). But the CFRD subjects had wider range of slopes, consistent with values as high as <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> &#x3c; 0.8.</p>
<p>Because our inference method also estimates the insulin degradation rate for an individual, this model implies that <italic>&#x3b2;</italic>
<sub>
<italic>port</italic>
</sub>
<italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> &#x3c; 1/<italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub>. The inferred fit for normal subjects, with degradation times are of order <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> are of order 10&#x2212;15&#xa0;min and <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> 0.1, are consistent with this inequality and reasonable values of <italic>&#x3b2;</italic>
<sub>
<italic>port</italic>
</sub>. But, for example, the CFRD subject whose data is shown in <xref ref-type="fig" rid="F4">Figure 4</xref>, has an <italic>&#x3b1;</italic>
<sub>
<italic>h</italic>
</sub> 0.8 and <italic>&#x3c4;</italic>
<sub>
<italic>pI</italic>
</sub> &#x223c;50 min, which is not consistent with normal portal blood flow values.</p>
<p>In future work with larger data sets we will investigate these observations as a function of subject health.</p>
<p>We further note that this linear model (11) for hepatic insulin degradation has limitations. In particular, the insulin-receptors on the hepatocytes then signal insulin endocytosis and degradation (<xref ref-type="bibr" rid="B21">Najjar and Perdomo, 2019</xref>). Therefore the rate of degradation is insulin dependent.</p>
</sec>
<sec id="s4-6">
<title>4.6 Study Limitations</title>
<p>This work represents a first attempt to apply this modeling approach to infer the parametrization of the ISR from clinical data. Here we have applied this approach to rather small data sets for both control and CFRD subjects. We anticipate that the distribution of normal and abnormal ISR functions will only be clear from much larger sets. We note that this effort fall short in terms of the aim of establishing functional shape for control subjects. This method can only infer the ISR function over the range expressed during the clinical measurement, and the maximum glucose level for control subjects represented here was well below 150mg/ld - and the inferred ISRs were far from saturated.</p>
</sec>
</sec>
<sec id="s5">
<title>5 Conclusion</title>
<p>This study presents a new approach for estimating ISR using plasma insulin and c-peptide measurements. Our approach uses simple insulin and c-peptide models and applies both insulin and c-peptide measures. This algorithm can infer ISR and CSR from OGTT data. Additionally, the method provides a deeper interpretation of the OGTT and a measure of the robustness and accuracy in both the inference and data.</p>
<p>We validate the estimation results in three ways. First, we validate the results by estimating the plasma insulin and c-peptide and comparing RMS between measurements and modeled responses of these variables. Second, we use the 1:1&#xa0;M ratio between ISR and CSR to assess the estimation results. We showed that a linear relationship between ISR and CSR can be observed when they are estimated correctly. This result is confirmed in both CFRD and normal subjects. Third, we showed that our algorithm can differentiate between subjects with different beta-cell phenotype-related diseases. Moreover, we showed that the ISR level in CFDR subjects is lower than the ISR level in normal subjects. However, since the variation in blood glucose is high in CFRD patients, the peak of ISR and plasma degradation time of insulin and c-peptide are estimated more precisely. Further, we showed that the estimation of ISR utilizing the single-compartment model is very similar to the results using the two-compartment model. This indicates different models the robustness of our approach in estimating the ISR using different models&#x2019; complicity and confirms that the ISR can be estimated precisely using only a simple model with less parameters. We also tested our model by treating uncertain measured values in the data. Finally, we provided a physiological interpretation that our method can handle the uncertainty in measured values and improve the estimation of ISR.</p>
<p>The immediate impact of this work is the development of a new approach for estimating ISR, which is now available for determining the beta-cell secretion rates for people with different conditions. This method is ready to implement into glucose models providing a better understanding of the glucose regulation system and monitoring people with diabetes.</p>
</sec>
<sec id="s6">
<title>Code Availability</title>
<p>Code for both fitting the ISRs, CSRs, and parametrizing the relationship between CSR and ISR, with examples to model-generated data, are available at (Inferring Insulin Secretion Rate From Sparse Patient Glucose and Insulin Measures (hyperlink &#x003D; <ext-link ext-link-type="uri" xlink:href="https://scholarsphere.psu.edu/resources/20d599c4-93fb-4a62-81d8-b69a88d58627">https://scholarsphere.psu.edu/resources/20d599c4-93fb-4a62-81d8-b69a88d58627</ext-link>) at doi: 10.26207/e8rf-e082).</p>
</sec>
</body>
<back>
<sec id="s7" sec-type="data-availability">
<title>Data Availability Statement</title>
<p>The datasets presented in this article are not readily available because The request should be submitted to the Colorado Multiple Institutional Review Board (Aurora, CO). Requests to access the datasets should be directed to Name: CC, email: <ext-link ext-link-type="uri" xlink:href="http://ChristineL.Chan@childrenscolorado.org">ChristineL.Chan@childrenscolorado.org</ext-link>.</p>
</sec>
<sec id="s8">
<title>Ethics Statement</title>
<p>The studies involving human participants were reviewed and approved by The study was approved by the Colorado Multiple Institutional Review Board (Aurora, CO), and informed consent and assent were obtained. The Title of the Study and NCT number are Glycemic Monitoring in Cystic Fibrosis, NCT02211235. Written informed consent for participation was not required for this study in accordance with the national legislation and the institutional requirements.</p>
</sec>
<sec id="s9">
<title>Author Contributions</title>
<p>RA: is the corresponding author, developed and applied the method, calculated statistical analysis, and wrote the manuscript. BG: contributed to the conception and design of the method. DA: contributed to the conception and wrote one paragraph of the manuscript. CC: provided the clinical data. RA, BG, DA: contributed to manuscript revision, read, and approved the submitted version.</p>
</sec>
<sec id="s10">
<title>Funding</title>
<p>This work funded through NIH Grant 5R01LM012734.</p>
</sec>
<sec sec-type="COI-statement" id="s11">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s12">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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