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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Physiol.</journal-id>
<journal-title>Frontiers in Physiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Physiol.</abbrev-journal-title>
<issn pub-type="epub">1664-042X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fphys.2013.00097</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Physiology</subject>
<subj-group>
<subject>Editorial Article</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Fractal analyses: statistical and methodological innovations and best practices</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Holden</surname> <given-names>John G.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Riley</surname> <given-names>Michael A.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Gao</surname> <given-names>Jianbo</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Torre</surname> <given-names>Kjerstin</given-names></name>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Complexity Group, Department of Psychology, CAP center for Cognition, Action, and Perception, University of Cincinnati</institution> <country>Cincinnati, OH, USA</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Psychology, CAP Center for Cognition, Action, and Perception, University of Cincinnati</institution> <country>Cincinnati, OH, USA</country></aff>
<aff id="aff3"><sup>3</sup><institution>PMB Intelligence LLC</institution> <country>West Lafayette, IN, USA</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Mechanical and Materials Engineering, Wright State University</institution> <country>Dayton, OH, USA</country></aff>
<aff id="aff5"><sup>5</sup><institution>State Key Laboratory of Non-linear Mechanics, Institute of Mechanics, Chinese Academy of Sciences</institution> <country>Beijing, China</country></aff>
<aff id="aff6"><sup>6</sup><institution>Movement to Health, University Montpellier</institution> <country>Montpellier, France</country></aff>
<author-notes>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: <email>holdenjn&#x00040;ucmail.uc.edu</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Frontiers in Fractal Physiology, a specialty of Frontiers in Physiology.</p></fn>
<fn fn-type="edited-by"><p>Edited by: Bruce J. West, U.S. Army Research Laboratory, USA</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Bruce J. West, U.S. Army Research Laboratory, USA</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>08</day>
<month>05</month>
<year>2013</year>
</pub-date>
<pub-date pub-type="collection">
<year>2013</year>
</pub-date>
<volume>4</volume>
<elocation-id>97</elocation-id>
<history>
<date date-type="received">
<day>17</day>
<month>04</month>
<year>2013</year>
</date>
<date date-type="accepted">
<day>20</day>
<month>04</month>
<year>2013</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2013 Holden, Riley, Gao and Torre.</copyright-statement>
<copyright-year>2013</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.</p>
</license>
</permissions>
<counts>
<fig-count count="1"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="11"/>
<page-count count="2"/>
<word-count count="854"/>
</counts>
</article-meta>
</front>
<body>
<p>Fractal statistics now routinely appear in the scientific literature. Examples originate from many disciplines, including aquatic sciences, biology, computer science, ecology, economics, geology, mathematics, medicine, neuroscience, physics, physiology, and psychology. This eBook provides a broad range of resources to support the application of fractal methods and theory in physiology and related disciplines. It is comprised of a set of research topic articles that appeared in the <italic>Frontiers in Physiology</italic> specialty section: Fractal Physiology. Our eBook chapters are organized along a loose continuum defined by the characteristics of the empirical measurements a given statistical technique is intended to confront.</p>
<p>At one end of the continuum are techniques designed for application to stochastic systems. van Rooij et al. (<xref ref-type="bibr" rid="B9">2013</xref>) describe histograms, probability distributions, and scaling distributions in fractal terms. The next step on the continuum concerns self-affine random fractals and methods intended for outcome measures that entail scale-invariant 1/<italic>f</italic> patterns or related patterns of temporal fluctuation. Stadnitski (<xref ref-type="bibr" rid="B8">2012</xref>) overviews several statistical procedures available for the analysis of fractal time-series measurements. Riley et al. (<xref ref-type="bibr" rid="B7">2012</xref>) discuss an adaptive fractal analysis that broadens the potential range of bio-signals that can be understood from a fractal perspective. Likewise, Marmelat et al. (<xref ref-type="bibr" rid="B5">2012</xref>) illustrate a relative roughness scale, helpful in determining the applicability of a monofractal description to a given signal. Wijnants et al. (<xref ref-type="bibr" rid="B11">2013</xref>) examines how of signal sampling rate artifacts influence spectrally derived scaling exponents. Hasselman (<xref ref-type="bibr" rid="B3">2013</xref>) discusses relationships among a set of common fractal time-series analyses, and advocates reliance on theory-driven predictions as a route to understanding the systems that yield empirical patterns. Eke et al. (<xref ref-type="bibr" rid="B1">2012</xref>) bridge the monofractal and multifractal frameworks with a special emphasis on the appropriate and accurate characterization of measured signals. Ihlen (<xref ref-type="bibr" rid="B4">2012</xref>) supplies a detailed tutorial on multifractal detrended fluctuation analysis.</p>
<p>The deterministic end of the statistical continuum emphasizes techniques used to investigate systems that express differentiable trajectories. Webber (<xref ref-type="bibr" rid="B10">2012</xref>) illustrates recurrence analysis on time-series derived from several multi-dimensional dynamic systems. Gao et al. (<xref ref-type="bibr" rid="B2">2012</xref>) introduces a very general analysis that is suitable for use on both stochastic and continuous measurements. Finally, Richardson et al. (<xref ref-type="bibr" rid="B6">2012</xref>) describe techniques that assess relative dynamic synchrony among multiple coupled oscillatory time-series. Taken together, the chapters offer a gamut of analytic strategies alongside contemporary expertise on how to best conduct and interpret the outcomes of fractal analyses.</p>
</body>
<back>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Eke</surname> <given-names>A.</given-names></name> <name><surname>Herman</surname> <given-names>P.</given-names></name> <name><surname>Sanganahalli</surname> <given-names>B. G.</given-names></name> <name><surname>Hyder</surname> <given-names>F.</given-names></name> <name><surname>Mukli</surname> <given-names>P.</given-names></name> <name><surname>Nagy</surname> <given-names>Z.</given-names></name></person-group> (<year>2012</year>). <article-title>Pitfalls in fractal time series analysis: fMRI BOLD as an exemplary case</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>417</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00417</pub-id><pub-id pub-id-type="pmid">23227008</pub-id></citation>
</ref>
<ref id="B2">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gao</surname> <given-names>J.</given-names></name> <name><surname>Hu</surname> <given-names>J.</given-names></name> <name><surname>Tung</surname> <given-names>W.-W.</given-names></name> <name><surname>Blasch</surname> <given-names>E.</given-names></name></person-group> (<year>2012</year>). <article-title>Multiscale analysis of biological data by scale-dependent Lyapunov exponent</article-title>. <source>Front. Physiol</source>. <volume>2</volume>:<issue>110</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2011.00110</pub-id><pub-id pub-id-type="pmid">22291653</pub-id></citation>
</ref>
<ref id="B3">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hasselman</surname> <given-names>F.</given-names></name></person-group> (<year>2013</year>). <article-title>When the blind curve is finite: dimension estimation and model inference based on empirical waveforms</article-title>. <source>Front. Physiol</source>. <volume>4</volume>:<issue>75</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2013.00075</pub-id><pub-id pub-id-type="pmid">23580349</pub-id></citation>
</ref>
<ref id="B4">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ihlen</surname> <given-names>E. A.</given-names></name></person-group> (<year>2012</year>). <article-title>Introduction to multifractal detrended fluctuation analysis in Matlab</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>141</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00141</pub-id><pub-id pub-id-type="pmid">22675302</pub-id></citation>
</ref>
<ref id="B5">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Marmelat</surname> <given-names>V.</given-names></name> <name><surname>Torre</surname> <given-names>K.</given-names></name> <name><surname>Deligni&#x000E8;res</surname> <given-names>D.</given-names></name></person-group> (<year>2012</year>). <article-title>Relative roughness: an index for testing the suitability of the monofractal model</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>208</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00208</pub-id><pub-id pub-id-type="pmid">22719731</pub-id></citation>
</ref>
<ref id="B6">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Richardson</surname> <given-names>M. J.</given-names></name> <name><surname>Garcia</surname> <given-names>R. L.</given-names></name> <name><surname>Frank</surname> <given-names>T. D.</given-names></name> <name><surname>Gergor</surname> <given-names>M.</given-names></name> <name><surname>Marsh</surname> <given-names>K. L.</given-names></name></person-group> (<year>2012</year>). <article-title>Measuring group synchrony: a cluster-phase method for analyzing multivariate movement time-series</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>405</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00405</pub-id><pub-id pub-id-type="pmid">23091463</pub-id></citation>
</ref>
<ref id="B7">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Riley</surname> <given-names>M. A.</given-names></name> <name><surname>Bonnette</surname> <given-names>S.</given-names></name> <name><surname>Kuznetsov</surname> <given-names>N.</given-names></name> <name><surname>Wallot</surname> <given-names>S.</given-names></name> <name><surname>Gao</surname> <given-names>J.</given-names></name></person-group> (<year>2012</year>). <article-title>A tutorial introduction to adaptive fractal analysis</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>371</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00371</pub-id><pub-id pub-id-type="pmid">23060804</pub-id></citation>
</ref>
<ref id="B8">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stadnitski</surname> <given-names>T.</given-names></name></person-group> (<year>2012</year>). <article-title>Measuring fractality</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>127</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00127</pub-id><pub-id pub-id-type="pmid">22586408</pub-id></citation>
</ref>
<ref id="B9">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>van Rooij</surname> <given-names>M. M. J. W.</given-names></name> <name><surname>Nash</surname> <given-names>B. A.</given-names></name> <name><surname>Rajaraman</surname> <given-names>S.</given-names></name> <name><surname>Holden</surname> <given-names>J. G.</given-names></name></person-group> (<year>2013</year>). <article-title>A fractal approach to dynamic inference and distribution analysis</article-title>. <source>Front. Physiol</source>. <volume>4</volume>:<issue>1</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2013.00001</pub-id><pub-id pub-id-type="pmid">23372552</pub-id></citation>
</ref>
<ref id="B10">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Webber</surname> <given-names>C. L.</given-names> <suffix>Jr.</suffix></name></person-group> (<year>2012</year>). <article-title>Recurrence quantification of fractal structures</article-title>. <source>Front. Physiol</source>. <volume>3</volume>:<issue>382</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00382</pub-id><pub-id pub-id-type="pmid">23060808</pub-id></citation>
</ref>
<ref id="B11">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wijnants</surname> <given-names>M. L.</given-names></name> <name><surname>Cox</surname> <given-names>R. F. A.</given-names></name> <name><surname>Hasselman</surname> <given-names>F.</given-names></name> <name><surname>Bosman</surname> <given-names>A. M. T.</given-names></name> <name><surname>Van Orden</surname> <given-names>G.</given-names></name></person-group> (<year>2013</year>). <article-title>Does sample rate introduce an artifact in spectral analysis of continuous processes?</article-title> <source>Front. Physiol</source>. <volume>3</volume>:<issue>495</issue>. <pub-id pub-id-type="doi">10.3389/fphys.2012.00495</pub-id><pub-id pub-id-type="pmid">23346058</pub-id></citation>
</ref>
</ref-list>
</back>
</article>