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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Phys.</journal-id>
<journal-title>Frontiers in Physics</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Phys.</abbrev-journal-title>
<issn pub-type="epub">2296-424X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">744346</article-id>
<article-id pub-id-type="doi">10.3389/fphy.2021.744346</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Physics</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Optical Coherence Tomography for Three-Dimensional Imaging in the Biomedical Field: A Review</article-title>
<alt-title alt-title-type="left-running-head">Zheng et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">OCT in the Biomedical Field</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zheng</surname>
<given-names>Shu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Bai</surname>
<given-names>Yanru</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xu</surname>
<given-names>Zihao</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1392458/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Pengfei</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Ni</surname>
<given-names>Guangjian</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/982541/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<label>
<sup>1</sup>
</label>Academy of Medical Engineering and Translational Medicine, Tianjin University, <addr-line>Tianjin</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<label>
<sup>2</sup>
</label>Tianjin Key Laboratory of Brain Science and Neuroengineering, <addr-line>Tianjin</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<label>
<sup>3</sup>
</label>Department of Biomedical Engineering, College of Precision Instruments and Optoelectronics Engineering, Tianjin University, <addr-line>Tianjin</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/143840/overview">Petra Granitzer</ext-link>, University of Graz, Austria</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1424250/overview">Bettina Heise</ext-link>, Johannes Kepler University of Linz, Austria</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1424870/overview">Byeong Ha Lee</ext-link>, Gwangju Institute of Science and Technology, South Korea</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Guangjian Ni, <email>niguangjian@tju.edu.cn</email>
</corresp>
<fn id="fn1" fn-type="equal">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this&#x20;work</p>
</fn>
<fn fn-type="other">
<p>This article was submitted to Optics and Photonics, a section of the journal Frontiers in Physics</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>28</day>
<month>09</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>9</volume>
<elocation-id>744346</elocation-id>
<history>
<date date-type="received">
<day>22</day>
<month>07</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>08</day>
<month>09</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Zheng, Bai, Xu, Liu and Ni.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Zheng, Bai, Xu, Liu and Ni</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Optical coherence tomography (OCT) has become a novel approach to noninvasive imaging in the past three decades, bringing a significant potential to biological research and medical biopsy <italic>in situ</italic>, particularly in three-dimensional (3D) <italic>in vivo</italic> conditions. Specifically, OCT systems using broad bandwidth sources, mainly centered at near-infrared-II, allow significantly higher imaging depth, as well as maintain a high-resolution and better signal-to-noise ratio than the traditional microscope, which avoids the scattering blur and thus obtains more details from delicate biological structures not just limited to the surface. Furthermore, OCT systems combined the spectrometer with novel light sources, such as multiplexed superluminescent diodes or ultra-broadband supercontinuum laser sources, to obtain sub-micron resolution imaging with high-speed achieve widespread clinical applications. Besides improving OCT performance, the functional extensions of OCT with other designs and instrumentations, taking polarization state or birefringence into account, have further improved OCT properties and functions. We summarized the conventional principle of OCT systems, including time-domain OCT, Fourier-domain OCT, and several typical OCT extensions, compared their different components and properties, and analyzed factors that affect OCT performance. We also reviewed current applications of OCT in the biomedical field, especially in hearing science, discussed existing limitations and challenges, and looked forward to future development, which may provide a guideline for those with 3D <italic>in vivo</italic> imaging desires.</p>
</abstract>
<kwd-group>
<kwd>optical coherence tomography</kwd>
<kwd>noninvasive imaging</kwd>
<kwd>high-resolution</kwd>
<kwd>clinic application</kwd>
<kwd>hearing science</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Optical coherence tomography (OCT), first proposed by David in 1991, is a novel three-dimensional (3D) imaging technology with noninvasive, high-resolution, and low-cost characteristics, which can perform high-definition cross-sectional imaging of the biological tissue <italic>in situ</italic> by measuring the reflected light signal, especially for transparent or translucent samples [<xref ref-type="bibr" rid="B1">1</xref>]. During 30&#xa0;years of development, ultrahigh-resolution OCT using the broad-bandwidth femtosecond laser technology obtained an axial resolution of 1&#xa0;<inline-formula id="inf1">
<mml:math id="m1">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> and transverse resolution of 3&#xa0;<inline-formula id="inf2">
<mml:math id="m2">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, which realized subcelluar imaging [<xref ref-type="bibr" rid="B2">2</xref>]. The emergence of the Fourier domain-OCT has also made a qualitative leap in the imaging speed of OCT. OCT systems have been widely used in the engineering and biomedical fields due to imaging quality and speed development. For example, OCT can realize the reconstruction and analysis of the detailed latent evidence in forensic science, such as fingerprint [<xref ref-type="bibr" rid="B3">3</xref>], handwriting [<xref ref-type="bibr" rid="B4">4</xref>], and repainted automobile hidden layers [<xref ref-type="bibr" rid="B5">5</xref>], which can also be used for tomographic imaging of micro-electro-mechanical system to achieve subsurface inspection [<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B7">7</xref>]. As mid-infrared light sources become increasingly low-cost and high-power, mid-infrared OCT also plays a vital role in non-destructive inspection, artistic diagnosis, and ceramic production [<xref ref-type="bibr" rid="B8">8</xref>, <xref ref-type="bibr" rid="B9">9</xref>]. However, OCT is more important to biomedical imaging, and it has become a general device in eye examinations.</p>
<p>New imaging technologies have promoted imaging and diagnosis of pathologic conditions [<xref ref-type="bibr" rid="B10">10</xref>&#x2013;<xref ref-type="bibr" rid="B13">13</xref>]. Improving imaging performance allows more details in lesions to be discovered, thus making early diagnosis and treatment. OCT has many advantages over the commonly used medical imaging equipment such as magnetic resonance imaging (MRI), computed tomography (CT), and others, as summarized in <xref ref-type="table" rid="T1">Table&#x20;1</xref>.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>The performance comparison of different medical imaging methods.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Imaging technology</th>
<th align="center">Resolution</th>
<th align="center">Imaging depth</th>
<th align="center">Speed</th>
<th align="center">Cost</th>
<th align="center">
<italic>in vivo</italic> image</th>
<th align="center">Advantages</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">MRI</td>
<td align="char" char=".">&#x223c;2&#x2013;3&#xa0;mm</td>
<td align="char" char=".">&#x223c;10&#x2013;20&#xa0;cm</td>
<td align="left">Slow</td>
<td align="left">Expensive</td>
<td align="left">Yes</td>
<td align="left">Sensitive to soft tissue</td>
</tr>
<tr>
<td align="left">CT</td>
<td align="char" char=".">&#x223c;2&#x2013;3&#xa0;mm</td>
<td align="char" char=".">&#x223c;20&#xa0;cm</td>
<td align="left">Fast</td>
<td align="left">Expensive</td>
<td align="left">Yes</td>
<td align="left">Sensitive to bone</td>
</tr>
<tr>
<td align="left">Ultrasound</td>
<td align="char" char=".">&#x223c;0.5&#xa0;mm</td>
<td align="char" char=".">&#x223c;10&#x2013;20&#xa0;cm</td>
<td align="left">Fast</td>
<td align="left">Low</td>
<td align="left">Yes</td>
<td align="left">Safe, Fast</td>
</tr>
<tr>
<td align="left">Tera Hertz Imaging</td>
<td align="char" char=".">&#x223c;0.1&#x2013;1&#xa0;mm</td>
<td align="char" char=".">&#x3e; 20&#xa0;cm</td>
<td align="left">Slow</td>
<td align="left">Low</td>
<td align="left">Yes</td>
<td align="left">Sufficient penetration</td>
</tr>
<tr>
<td align="left">Optical Microscopy</td>
<td align="char" char=".">&#x223c;1&#xa0;<inline-formula id="inf3">
<mml:math id="m3">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>
</td>
<td align="char" char=".">&#x223c;5&#x2013;10&#xa0;<inline-formula id="inf4">
<mml:math id="m4">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>
</td>
<td align="left">Fast</td>
<td align="left">Low</td>
<td align="left">No</td>
<td align="left">High resolution</td>
</tr>
<tr>
<td align="left">OCT</td>
<td align="char" char=".">&#x223c;1&#x2013;15&#xa0;<inline-formula id="inf5">
<mml:math id="m5">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>
</td>
<td align="char" char=".">&#x223c;2&#x2013;3&#xa0;mm</td>
<td align="left">Fast</td>
<td align="left">Low</td>
<td align="left">Yes</td>
<td align="left">Non-invasive, 3D</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The signal of the OCT system depends on the reflected characteristics of the sample structure. According to the detection method, OCT can be divided into time-domain OCT (TD-OCT) and Fourier-domain OCT (FD-OCT).</p>
<p>TD-OCT is the earliest OCT system based on the Michelson interferometer [<xref ref-type="bibr" rid="B1">1</xref>, <xref ref-type="bibr" rid="B14">14</xref>]. <xref ref-type="fig" rid="F1">Figure&#x20;1A</xref> shows that the light from the low-coherence light source is split into a sample arm and a reference arm via a beam splitter. By coupling the sample arm reflected from the sample with the reference arm, which has a fixed optical path, one can obtain the interference pattern of the two beams [<xref ref-type="bibr" rid="B10">10</xref>]. TD-OCT relies on the movement of the reference mirror to obtain information of different depths of the sample. Therefore, acquiring depth information needs to move the reference mirror [<xref ref-type="bibr" rid="B10">10</xref>, <xref ref-type="bibr" rid="B15">15</xref>], which dramatically limits the imaging speed of the system, thereby hindering the development and broad applications of the TD-OCT system.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>The Schematic diagrams of TD-OCT, SD-OCT, SS-OCT, and FF-OCT.</p>
</caption>
<graphic xlink:href="fphy-09-744346-g001.tif"/>
</fig>
<p>While FD-OCT obtains the image through Fourier transformation, which acquires the internal structure information in the sample&#x27;s depth direction synchronously, thus improving the imaging speed significantly [<xref ref-type="bibr" rid="B15">15</xref>, <xref ref-type="bibr" rid="B16">16</xref>]. FD-OCT can be divided into spectral-domain OCT (SD-OCT) and swept-source OCT according to types of the light source as shown in <xref ref-type="fig" rid="F1">Figures 1B,C</xref>. The light source used in the SD-OCT system is the same as that in the TD-OCT. Nevertheless, as all the components in this system are unmovable, it has higher mechanical stability and a lower noise ratio. Compared with the SD-OCT, the swept-source OCT uses a swept laser light source and photodetector, quickly generating the interferogram. In general, FD-OCT has high imaging speed and high sensitivity, making it more suitable for commercial applications.</p>
<p>Besides, the full-field OCT (FF-OCT) shown in <xref ref-type="fig" rid="F1">Figure&#x20;1D</xref> is composed of incoherence light source and area array camera, which can not only obtain submicrometer spatial resolution and millisecond temporal resolution but also realize imaging of the tiny structure in a large field of view [<xref ref-type="bibr" rid="B17">17</xref>], which has potential in noninvasive medical diagnosis and imaging of dynamic biological tissues <italic>in vivo</italic>, such as cancer cell [<xref ref-type="bibr" rid="B18">18</xref>], human skin [<xref ref-type="bibr" rid="B19">19</xref>] and eye diseases. It can also achieve non-destructive testing and high-precision measurement, such as analyzing the internal structure of pearls [<xref ref-type="bibr" rid="B20">20</xref>]. The Fourier-domain FF-OCT is based on a tunable laser source, and the fast camera is a fast volumetric imaging technology (17) that effectively avoids motion artifacts during imaging. In 2010, full-field optical coherence microscopy with 0.8&#x20;<inline-formula id="inf6">
<mml:math id="m6">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> axial resolution was successfully used to measure the refractive index of a single living cell, which provided new possibilities for dynamic cell analysis&#x20;[<xref ref-type="bibr" rid="B21">21</xref>].</p>
<p>In addition, OCT has various extensions aiming to assess functional aspects of the tissue besides general imaging. For example, Doppler OCT can visualize blood vessels and estimate the velocity of blood fleeting [<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B23">23</xref>], which is achieved through distinguishing the different OCT signals induced by flowing cells and stationary tissue without staining [<xref ref-type="bibr" rid="B24">24</xref>, <xref ref-type="bibr" rid="B25">25</xref>]. Other extensions, such as polarization-sensitive OCT and phase-sensitive OCT, have also been used in higher spatial resolution structural imaging. Polarization-sensitive OCT takes polarization state and birefringence into account, supplying the extra imaging contrast [<xref ref-type="bibr" rid="B26">26</xref>&#x2013;<xref ref-type="bibr" rid="B28">28</xref>]. Thus, polarization-sensitive OCT has the potential of high spatial resolution, which can display detailed structural information. In contrast, the phase-sensitive OCT is based on the high sensitivity to the phase difference between the sample arm and the reference arm [<xref ref-type="bibr" rid="B29">29</xref>], avoiding common-mode noise [<xref ref-type="bibr" rid="B30">30</xref>]. It is a powerful and potential technology with high sensitivity (26, 27), which can be used to measure the sample&#x27;s motion.</p>
<p>Current commercial OCT systems with micron-level resolution and millimeter-level imaging depth play an essential role in biomedical fields such as ophthalmology, endoscopy, cardiovascular disease, and otology research [<xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B31">31</xref>, <xref ref-type="bibr" rid="B32">32</xref>]. Especially in fundus examination, OCT is the fastest <italic>3D</italic> imaging technology [<xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B33">33</xref>]. Furthermore, as a three-dimensional imaging instrument that can realize "optical biopsy", OCT has become a promising biomedical imaging technology&#x20;[<xref ref-type="bibr" rid="B34">34</xref>].</p>
</sec>
<sec id="s2">
<title>Key Properties</title>
<p>The performance of OCT systems mainly depends on its resolution, imaging depth, and other parameters such as sensitivity and imaging speed. In addition, many factors need to be considered in clinical applications and biological tissue visualization, such as imaging contrast, biochemical information, system compactness, and user-friendliness&#x20;[<xref ref-type="bibr" rid="B10">10</xref>].</p>
<sec id="s2-1">
<title>Resolution</title>
<p>Compared with MRI and optical microscopy, OCT realizes high resolution while the axial resolution and transverse resolution of OCT depend on the different factors, as shown in <xref ref-type="fig" rid="F2">Figure&#x20;2</xref>.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>
<bold>(A)</bold> Relationship between axial resolution and spectral bandwidth based on the <xref ref-type="disp-formula" rid="e1">Eq. 1</xref>. <bold>(B)</bold> Relationship between transverse resolution and depth of field for different central wavelengths of the optical source based on the <xref ref-type="disp-formula" rid="e3">Eq. 3</xref>.</p>
</caption>
<graphic xlink:href="fphy-09-744346-g002.tif"/>
</fig>
<sec id="s2-1-1">
<title>Axial Resolution</title>
<p>The axial resolution, <inline-formula id="inf7">
<mml:math id="m7">
<mml:mrow>
<mml:mi>&#x394;</mml:mi>
<mml:mi>z</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, is determined by the coherence length of the broadband light source [<xref ref-type="bibr" rid="B10">10</xref>]. In the case of the Gaussian optics, the axial resolution is given by:<disp-formula id="e1">
<mml:math id="m8">
<mml:mrow>
<mml:mi>&#x394;</mml:mi>
<mml:mi mathvariant="bold-italic">z</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mi mathvariant="bold-italic">ln</mml:mi>
<mml:mn>2</mml:mn>
</mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c0;</mml:mi>
</mml:mfrac>
<mml:mfrac>
<mml:mrow>
<mml:msup>
<mml:mi mathvariant="bold-italic">&#x3bb;</mml:mi>
<mml:mn>2</mml:mn>
</mml:msup>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x394;&#x3bb;</mml:mi>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(1)</label>
</disp-formula>where <inline-formula id="inf8">
<mml:math id="m9">
<mml:mi>&#x3bb;</mml:mi>
</mml:math>
</inline-formula> is the center wavelength, and <inline-formula id="inf9">
<mml:math id="m10">
<mml:mrow>
<mml:mtext>&#x394;</mml:mtext>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> is the spectral bandwidth.</p>
<p>The light source bandwidth is proportional to axial resolution according to <xref ref-type="disp-formula" rid="e1">Eq. 1</xref>, while the center wavelength is inversely proportional to axial resolution. In order to improve the axial resolution of OCT, one should increase the spectral bandwidth or decrease the center wavelength [<xref ref-type="bibr" rid="B35">35</xref>]. Therefore, ultrabroad bandwidth light source technology enables ultrahigh-resolution OCT in the near-infrared (NIR) wavelength region [<xref ref-type="bibr" rid="B32">32</xref>, <xref ref-type="bibr" rid="B36">36</xref>]. Novel light sources such as ultrabroad bandwidth solid-state lasers and superluminescent diode have the advantage of providing broad bandwidth with sufficient output power, which is desired for high-resolution. <xref ref-type="fig" rid="F3">Figure&#x20;3</xref> shows that different retina layers can be clearly seen, demonstrating that OCT with higher axial resolution can obtain higher quality imaging results.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Comparison of OCT cross-sectional imaging of the human eye <italic>in&#x20;vivo:</italic> <bold>(A)</bold> TD-OCT with an axial resolution of approximatcly 10&#xa0;&#xb5;m and speed allowing for acquiring 400 optical A-scans per second; <bold>(B)</bold> FD-OCT with an axial resolution equal to 2&#xa0;&#xb5;m and speed allowing for a measurement of 30,000 optical A-scans/s. Reprinted with permission from [<xref ref-type="bibr" rid="B31">31</xref>] <sup>&#xa9;</sup> The Optical Society.</p>
</caption>
<graphic xlink:href="fphy-09-744346-g003.tif"/>
</fig>
</sec>
<sec id="s2-1-2">
<title>Transverse Resolution</title>
<p>The transverse resolution, <inline-formula id="inf10">
<mml:math id="m11">
<mml:mrow>
<mml:mi>&#x394;</mml:mi>
<mml:mi>x</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, is determined by the focal spot size [<xref ref-type="bibr" rid="B34">34</xref>, <xref ref-type="bibr" rid="B35">35</xref>]. Assuming Gaussian rays and only taking Gaussian optics into account, the transverse resolution is given by:<disp-formula id="e2">
<mml:math id="m12">
<mml:mrow>
<mml:mi>&#x394;</mml:mi>
<mml:mi>x</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>4</mml:mn>
<mml:mi mathvariant="bold-italic">&#x3bb;</mml:mi>
</mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c0;</mml:mi>
</mml:mfrac>
<mml:mfrac>
<mml:mi mathvariant="bold-italic">f</mml:mi>
<mml:mi mathvariant="bold-italic">d</mml:mi>
</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(2)</label>
</disp-formula>where <inline-formula id="inf11">
<mml:math id="m13">
<mml:mi>&#x3bb;</mml:mi>
</mml:math>
</inline-formula> is the center wavelength, <italic>f</italic> is the effective focal length of the focusing optics, and <italic>d</italic> denotes the spot size on the objective&#x20;lens.</p>
<p>The numerical aperture (NA), an important optical parameter, is often used to measure the angle of light that the system can receive. As a high numerical aperture allows more light to enter the system, it is evident that high NA can give a high transverse resolution, implying a smaller focal spot&#x20;size.</p>
<p>However, high NA will result in a shorter depth of field, limiting the scope of the precise imaging. The relationship between depth of field, <italic>b</italic>, and transverse resolution, <inline-formula id="inf12">
<mml:math id="m14">
<mml:mrow>
<mml:mi>&#x394;</mml:mi>
<mml:mi>x</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, is given by:<disp-formula id="e3">
<mml:math id="m15">
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mrow>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c0;&#x394;</mml:mi>
<mml:msup>
<mml:mi mathvariant="bold-italic">x</mml:mi>
<mml:mn>2</mml:mn>
</mml:msup>
</mml:mrow>
<mml:mo>/</mml:mo>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mi mathvariant="bold-italic">&#x3bb;</mml:mi>
</mml:mrow>
</mml:mrow>
</mml:mrow>
</mml:math>
<label>(3)</label>
</disp-formula>
</p>
<p>It can be seen from <xref ref-type="disp-formula" rid="e3">Eq. 3</xref> that the depth of field is inversely proportional to the transverse resolution so that the transverse resolution and depth of field restrict each other. Using a dynamic focus tracking system may solve this problem [<xref ref-type="bibr" rid="B35">35</xref>]. Especially in real applications, we should consider the limitations under specific circumstances. Sometimes the objective lens with a smaller numerical aperture will be used to obtain a more significant depth of&#x20;field.</p>
</sec>
</sec>
<sec id="s2-2">
<title>Imaging Depth</title>
<p>Imaging depth plays a crucial role in many OCT applications, particularly in the biomedical field. In the TD-OCT system, the reference mirror position determines the imaging position, making the TD-OCT system able to image at any depth in the ideal case. However, the absorption and scattering of the sample limit the distance of the light path, so the imaging depth is also limited. Without considering the properties of an examined sample, the imaging depth of SD-OCT is determined by the center wavelength of the light source and the spectrometer&#x2019;s resolution. As shown in <xref ref-type="fig" rid="F4">Figure&#x20;4</xref>, the axial resolution of the OCT at 1.06&#xa0;&#x3bc;m wavelength is better than that at 1.3&#xa0;&#x3bc;m wavelength. The resolutions of the two OCTs are 11 and 16&#xa0;&#x3bc;m, respectively. However, at the same imaging depth, OCT at 1.3&#xa0;&#x3bc;m wavelength has better contrast, and the imaging edge is more obvious because OCT at 1.3&#xa0;&#x3bc;m wavelength operates at a longer wavelength having higher penetration depth. It also needs to be noted that more noise and interference will be introduced as the depth increases. In theory, the maximum imaging depth, <inline-formula id="inf13">
<mml:math id="m16">
<mml:mrow>
<mml:msub>
<mml:mi>z</mml:mi>
<mml:mrow>
<mml:mi>m</mml:mi>
<mml:mi>a</mml:mi>
<mml:mi>x</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>, can be expressed as<disp-formula id="e4">
<mml:math id="m17">
<mml:mrow>
<mml:msub>
<mml:mi mathvariant="bold-italic">z</mml:mi>
<mml:mrow>
<mml:mi mathvariant="bold-italic">max</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msup>
<mml:mi mathvariant="bold-italic">&#x3bb;</mml:mi>
<mml:mn>2</mml:mn>
</mml:msup>
</mml:mrow>
<mml:mrow>
<mml:mn>4</mml:mn>
<mml:mi mathvariant="bold-italic">n&#x3b4;&#x3bb;</mml:mi>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(4)</label>
</disp-formula>where <inline-formula id="inf14">
<mml:math id="m18">
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> represents the resolution of the spectrometer. This formula proves that a high-resolution spectrometer can improve the imaging depth of SD-OCT.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>The cross-sectional images of the mouse cochlea from OCT with the different center wavelength. OCT centered at <bold>(A)</bold> 1.06&#x00a0;&#x00b5;m and <bold>(B)</bold> 1.3&#x00a0;&#x00b5;m. PBS indicated that the mouse cochlea samples were preserved in a phosphate-buffered saline solution. The red arrow represents the depth direction of the imaging. Scale bars: 250&#x00a0;&#x00b5;m. Modified with permission from [<xref ref-type="bibr" rid="B37">37</xref>] <sup>&#x00a9;</sup> The Optical Society.</p>
</caption>
<graphic xlink:href="fphy-09-744346-g004.tif"/>
</fig>
<p>While considering the properties of a sample, the absorption and scattering make it impossible to reach the theoretical value. Besides, the disordered scattered light will reduce the imaging contrast, system resolution, and imaging depth which causes a decline in image quality. In conclusion, the maximum imaging depth depends on the parameters of the OCT system and the absorption and scattering of the sample.</p>
</sec>
<sec id="s2-3">
<title>Detection Sensitivity</title>
<p>The sensitivity of the imaging system is also a crucial parameter in biomedical imaging [<xref ref-type="bibr" rid="B37">37</xref>]. Since the interferometry that OCT applies measures the distribution of the interference field rather than the intensity of light, the OCT system possesses high sensitivity compared with other optical imaging systems.</p>
<p>Sensitivity, <italic>S</italic>, is defined as the inverse minimal sample reflectivity in OCT [<xref ref-type="bibr" rid="B16">16</xref>], which can be expressed as<disp-formula id="e5">
<mml:math id="m19">
<mml:mrow>
<mml:mi mathvariant="bold-italic">S</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mi mathvariant="bold-italic">&#xa0;</mml:mi>
<mml:mfrac>
<mml:mn>1</mml:mn>
<mml:mrow>
<mml:msub>
<mml:mi mathvariant="bold-italic">R</mml:mi>
<mml:mrow>
<mml:mi mathvariant="bold-italic">S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi mathvariant="bold-italic">min</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
<mml:msub>
<mml:mo>&#x7c;</mml:mo>
<mml:mrow>
<mml:mi mathvariant="bold-italic">SNR</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
<label>(5)</label>
</disp-formula>
</p>
<p>However, as imaging depth increases, the sensitivity of OCT also rolls off. It can be seen from <xref ref-type="fig" rid="F4">Figure&#x20;4</xref> that as the&#x20;imaging depth increases, the contrast and sharpness of the images gradually deteriorate. Since the sensitivity of the&#x20;two OCTs shown in <xref ref-type="fig" rid="F4">Figure&#x20;4</xref> is similar, the difference in imaging performance is mainly due to different wavelengths.</p>
<p>In addition, in SD-OCT, roll-off in the sensitivity is mainly due to the limitation of the number and size of CCD and other components that make up the spectrometer. These limitations cause signal distortion and limit imaging depth. Many attempts have been made to reduce the sensitivity roll-off. For instance, in 2020, a telecentric f-theta imaging lens was designed to decrease the roll-off, and the imaging depth was increased by 13% [<xref ref-type="bibr" rid="B38">38</xref>]. After that, David et&#x20;al. used two reference arms to increase the sensitivity by 14&#xa0;dB&#x20;[<xref ref-type="bibr" rid="B39">39</xref>].</p>
</sec>
<sec id="s2-4">
<title>Imaging Speed</title>
<p>High imaging speed is a necessary condition for realizing 3D volumetric imaging. Initially, the imaging speed of the first TD-OCT is seconds/a B-scan [<xref ref-type="bibr" rid="B1">1</xref>], which is mainly limited by the motion of the reference mirror. Much work has been devoted to improve the delay light path and increase the speed of mechanical motion. Until the emergence of FD-OCT, the imaging speed of OCT became a qualitative leap since spectral information replaced mechanical movement. For FD-OCT with a single beam, the speed of SD-OCT is mainly determined by the imaging time of CCD or CMOS, while the speed of SS-OCT depends on the wavelength-tuning speed of swept sources [<xref ref-type="bibr" rid="B16">16</xref>]. In ophthalmology imaging, faster imaging speed can reduce motion artifacts caused by eye movements and thus obtain more explicit images. In <xref ref-type="fig" rid="F3">Figure&#x20;3</xref>, the imaging speed of SD-OCT is 175&#x20;times that of TD-OCT. The improvement of SD-OCT imaging quality is due to the increase in axial resolution and imaging speed enhancement. The higher A-scan speed makes the edges of different retina layers smoother, and at the same time, reduces movement artifacts caused by eye movement during imaging. The improvement of laser tuning speed, the design of multi-beam path, and the parallel imaging methods have continuously improved the imaging speed of OCT, and the OCT system possessed A-Scan rate as &#x201c;MHz-OCT&#x201d; or &#x201c;multi-MHz-OCT&#x201d; has been produced&#x20;[<xref ref-type="bibr" rid="B40">40</xref>].</p>
</sec>
</sec>
<sec id="s3">
<title>Applications of Optical Coherence Tomography in the Biomedical Field</title>
<sec id="s3-1">
<title>Optical Coherence Tomography in Ophthalmology</title>
<p>Glaucoma and age-related macular degeneration are the primary diseases that cause blindness [<xref ref-type="bibr" rid="B41">41</xref>]. It is crucial to study the vitreoretinal interface comprehensively and further improve our understanding of the pathogenesis and development of retinal diseases. The retinal nerve sensory layer from the outside to the inside is the rods, the cones, the outer limiting membrane layer, the outer nuclear layer, the outer plexiform layer, the inner nuclear layer, the inner plexiform layer, the ganglion cell layer, and the inner limiting membrane&#x20;[<xref ref-type="bibr" rid="B42">42</xref>].</p>
<p>Different eye diseases affect the cells and functional layers in the retina [<xref ref-type="bibr" rid="B43">43</xref>]. Hence many diseases can be found from fundus examination. Fundus examinations usually use ophthalmoscopes with limited magnifications, which is insufficient for early observation of small lesions. However, OCT can obtain three-dimensional imaging of the sub-surface of the eyeball structure with the micron spatial resolution and with millisecond time resolution [<xref ref-type="bibr" rid="B41">41</xref>, <xref ref-type="bibr" rid="B44">44</xref>], which can observe the pathological alterations of the ocular fundus and provide supplemental information to monitor the progress of the disease accurately and further understanding of the blindness. There is no doubt that ophthalmology is the most widely used application of OCT. OCT has been a standard detection tool in ophthalmology clinics and significantly improves the potential of early diagnosis, monitoring, and precise treatment [<xref ref-type="bibr" rid="B33">33</xref>, <xref ref-type="bibr" rid="B45">45</xref>]. The representative OCT image of the mouse retina is shown in <xref ref-type="fig" rid="F5">Figure&#x20;5A</xref>, which indicates that OCT can image the layers of the retina clearly, thereby providing corresponding structural information for retinal diseases.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>
<bold>(A)</bold> OCT image of the mouse retina. Reprinted with permission from Ref [<xref ref-type="bibr" rid="B47">47</xref>] <sup>&#xa9;</sup> Wiley. GCL, ganglion cell layer; IPL, inner plexiform layer; INL, inner nuclear layer: OPL, outer plexiform layer; ONL, outer nuclear layer: ELM, external limiting membrance; Ise, inner segment ellipsoid: OS, outer segment; RPE, retinal pigment epithelium. <bold>(B)</bold> en face OCTA of the inner retina. Modified with permission from Ref [<xref ref-type="bibr" rid="B48">48</xref>] <sup>&#xa9;</sup> Springer Nature.</p>
</caption>
<graphic xlink:href="fphy-09-744346-g005.tif"/>
</fig>
<p>In addition, the extensions of optical coherence tomography angiography (OCTA) also play an important role in visualizing blood flow, as shown in <xref ref-type="fig" rid="F5">Figure&#x20;5B</xref>. It is possible to observe the capillaries of the retina and choroid non-invasively, thus acquiring the location, shape, and structure of the diseased blood vessel and evaluating the velocity of blood flow to understand the progress of the disease in depth [<xref ref-type="bibr" rid="B46">46</xref>, <xref ref-type="bibr" rid="B47">47</xref>]. The commonly used clinical imaging method of ocular blood circulation is fundus fluorescence angiography. However, this method requires the injection of a fluorescent agent and can only obtain two-dimensional images, which is inferior to OCTA in image resolution, safety, and imaging depth [<xref ref-type="bibr" rid="B48">48</xref>, <xref ref-type="bibr" rid="B49">49</xref>]. The angiography results obtained from OCTA have a higher pixel density and fewer motion artifacts and can also measure blood oxygen or provide information about neurological diseases [<xref ref-type="bibr" rid="B50">50</xref>, <xref ref-type="bibr" rid="B51">51</xref>]. Besides, OCT can provide more comprehensive imaging and then get the oxygen metabolism of biological tissues combined with multi-spectral polarizing film dispersion while obtaining molecular level biochemical information with Raman spectroscopy [<xref ref-type="bibr" rid="B52">52</xref>,&#x20;<xref ref-type="bibr" rid="B53">53</xref>].</p>
<p>With the development of ultra-broadband laser sources and high-speed detection technology, the ophthalmic OCT system performance has been improved significantly, bringing the potential to 3D noninvasive optical biopsy of the retina <italic>in vivo</italic>. The morphology <italic>in situ</italic> obtained by the OCT system is close to the resolution of histopathology [<xref ref-type="bibr" rid="B54">54</xref>]. The significant improvement of axial resolution and imaging speed enables three-dimensional high-resolution imaging of the retina and makes it possible to quantify the volume of pathological changes in the retina [<xref ref-type="bibr" rid="B31">31</xref>]. Fourier-domain FF-OCT has recently replaced traditional OCT and becomes a powerful tool for ophthalmic imaging due to the highest imaging speed and its capability to avoid motion artifacts and risks <italic>in vivo</italic> [<xref ref-type="bibr" rid="B55">55</xref>]. Moreover, a combination of OCT and hyperspectral imaging allows obtaining the spectral information of oxygen saturation and hemoglobin while acquiring the tissue morphological characteristics [<xref ref-type="bibr" rid="B56">56</xref>]. The ability to obtain vascular morphology and functional characteristics is of great significance to clinical applications. Furthermore, the emergence of machine learning makes the automatic processing of images become a reality that can quickly obtain adequate information and make a diagnosis [<xref ref-type="bibr" rid="B57">57</xref>,&#x20;<xref ref-type="bibr" rid="B58">58</xref>].</p>
</sec>
<sec id="s3-2">
<title>Optical Coherence Tomography in Otology</title>
<p>It is complex progress to convert sound into hearing perception. The sound energy propagates in the cochlea as a traveling wave [<xref ref-type="bibr" rid="B59">59</xref>], and the cochlea amplifies low-level sound in a nonlinear active way. The measurement of the progress of sound conduction makes it possible for researchers to have a deep understanding of hearing. However, the vibration inside the inner ear (the cochlea) is still not fully understood. Thus, the following contents mainly introduce the applications of OCT in the inner ear, especially in the cochlea. Moreover, the challenge is to measure nanometer-scale motion in a wide frequency range through the complicated cochlear fine structure&#x20;[<xref ref-type="bibr" rid="B60">60</xref>].</p>
<p>Before the widespread use of OCT, the primary technologies for detecting the cochlea are microscopy, MRI, and CT, but each technique has its drawback. Microscopy, which was initially used to observe the movement in the cochlea, can provide high spatial and temporal resolution. However, the most significant limitation of the microscope is that the imaging depth is insufficient, so it is mainly used to observe the surface and cannot image the cochlea <italic>in vivo</italic>. Although MRI and CT have great imaging depth and have become standard diagnostic equipment, proving an excellent diagnostic tool for brain, liver, kidney, other solid organs, heart, and large blood vessels, the lack of spatial resolution hinders its application in measuring the cochlear micromechanics. Thus, to study the cochlea deeply, the imaging method requires high-resolution and enough imaging depth. OCT has a micron-level resolution, millimeter-level imaging depth, low cost, and safety, making it an effective method for studying cochlear micromechanics.</p>
<p>Currently, the application of OCT on the cochlea mainly includes three aspects: structural imaging, angiography, and vibration measurement. The first application of OCT on the cochlea was performed in 2007, which acquired images and vibration measurements of the organ of Corti (OoC) of the guinea pig <italic>in vivo</italic> [<xref ref-type="bibr" rid="B61">61</xref>]. Following researches also obtained the cochlear images in mice through this approach [<xref ref-type="bibr" rid="B62">62</xref>]. The utility of OCT breaks through the limitation that the laser interferometer can only measure the basal region of the cochlea, which can easily obtain two-dimensional images of each turn of the cochlea and reconstruct the three-dimensional structure images [<xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B64">64</xref>]. However, due to the resolution limitation, the internal structure of the organ of Corti cannot be imaged clearly. In recent research, a micro-optical coherence tomography (&#x3bc;OCT) with a high axial resolution of 1&#xa0;&#x3bc;m obtained from an ultra-broadband supercontinuum laser source was shown to provide subcellular details of the guinea pig cochlea, such as scala tympani, basilar membrane, and other structures or OoC. It proves that the &#x3bc;OCT can distinguish the microstructure of the mammalian cochlea [<xref ref-type="bibr" rid="B65">65</xref>], as shown in <xref ref-type="fig" rid="F6">Figure&#x20;6A</xref>. Considering the bone of the cochlear capsule, the external auditory canal, and other structures have to be removed during the imaging process, which inevitably causes a certain degree of damage. Therefore, this imaging method is only used to observe the isolated human cochlea [<xref ref-type="bibr" rid="B66">66</xref>] and has not yet been applied in living humans. At the same time, it may be used to avoid residual hearing loss during cochlea implant (CI) insertion [<xref ref-type="bibr" rid="B67">67</xref>] and may provide real-time 3D images in the future.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>
<bold>(A)</bold> 3D volumetrically reconstructed &#xb5;OCT image of the organ of Corti of the guinea pig <italic>in situ</italic>. Modified with permission from [<xref ref-type="bibr" rid="B66">66</xref>] <sup>&#xa9;</sup> Springer Nature. BM, basilar membrance; ST, scala tympani; SM, scala media; TC, tunnel of Corti; SN, space of Nuel. Scales &#x3d; 100&#xa0;&#xb5;m. <bold>(B,C)</bold> The anatomical structures of Corti and the maps of vibration magnitudes under 65&#xa0;dB SPL stimulus. Modified with permission from [<xref ref-type="bibr" rid="B75">75</xref>] <sup>&#xa9;</sup> Springer Nature.</p>
</caption>
<graphic xlink:href="fphy-09-744346-g006.tif"/>
</fig>
<p>OCT angiography (OCTA), a functional extension of general OCT, enable the three-dimensional visualization of the cochlear blood flow by distinguishing the OCT signals of moving red blood cells and static organization without dye, which is significant to the prevention and treatment of many diseases in otology, such as insufficient or abnormal blood supply in the cochlea [<xref ref-type="bibr" rid="B68">68</xref>, <xref ref-type="bibr" rid="B69">69</xref>]. Laser Doppler flowmetry (LDF), based on the Doppler principle, is already diagnostic equipment commonly used in modern medicine, while the spatial resolution is limited [<xref ref-type="bibr" rid="B70">70</xref>]. Compared with LDF, OCTA possessed a high-resolution is capable of imaging the capillaries of the cochlea.</p>
<p>In addition to the above two applications, OCT can obtain the vibration characteristics at all the cochlea turns and accurately measure the vibration of different structures, such as OHCs, Deiters&#x2019; cell regions, tectorial membrane, and the reticular lamina. Compared with a laser doppler vibrometer, OCT can observe the cochlea through the round window membrane, avoiding the placement of the reflective beads. The measurement results of cochlear vibration are shown in <xref ref-type="fig" rid="F6">Figures 6B,C</xref> where (B) is a schematic diagram of Corti, and (C) is the vibration map obtained under 65&#xa0;dB SPL multi-tone stimulus. We can draw the following conclusions from <xref ref-type="fig" rid="F6">Figure&#x20;6</xref>. Firstly, OCT can measure the map of vibration magnitudes; secondly, it was evident that different structures have different amplitudes for the same sound intensity, which implies the sound-evoked motion. The results of other research are as follows. The frequency tuning at the base is sharper than that at the apex [<xref ref-type="bibr" rid="B64">64</xref>, <xref ref-type="bibr" rid="B71">71</xref>, <xref ref-type="bibr" rid="B72">72</xref>], and different structures of the OoC have different amplitudes, and phases [<xref ref-type="bibr" rid="B73">73</xref>&#x2013;<xref ref-type="bibr" rid="B75">75</xref>], which indicates that the mechanical response of OoC has a transition along the length of the cochlea and the cochlear mechanical response varies with frequency and sound pressure. When measuring the insensitive cochlea, the amplitude increases almost linearly with the intensity of the stimulus, and the different structures of the OoC almost have the same amplitude [<xref ref-type="bibr" rid="B76">76</xref>, <xref ref-type="bibr" rid="B77">77</xref>]. However, OCT cannot be highly reliable for the measurement results under very low sound pressure, such as below 20&#xa0;dB SPL, due to the instrument noise, in which case the signal and the noise threshold are almost at the same order magnitude.</p>
<p>Although OCT is a powerful tool for studying the hearing mechanism, current research is mainly for animals since the cochlea <italic>in vivo</italic> imaging or vibration measurement will inevitably cause damage. Therefore, further developments will be needed for research or diagnosis of the living human cochlea. In addition, the high resolution and sufficient imaging depth, both limited by the central wavelength, are difficult to meet simultaneously. A recent study that used OCT with center wavelengths at 1,060&#xa0;nm and 1,300&#xa0;nm was carried out to explore better wavelengths for cochlear imaging based on contrast and attenuation. It was concluded that 1,060&#xa0;nm is better for high contrast and enough imaging depth [<xref ref-type="bibr" rid="B78">78</xref>]. However, when observing the living cochlea, anatomical conditions and the influence of lymph fluid need to be considered. At this time, a light source with a center wavelength of 1,060&#xa0;nm may not provide sufficient imaging depth. Moreover, anesthesia also affects the cochlear response, which is confirmed by many current studies. Thus, there is still a long way to go for a thorough understanding of the cochlear response.</p>
</sec>
<sec id="s3-3">
<title>Endoscopy Optical Coherence Tomography</title>
<p>Endoscope combined with OCT, another widespread application of OCT, has become an essential tool for <italic>in vivo</italic> imaging of internal organs. Endoscopic imaging creates the possibility to obtain information from places where are hard to study using traditional methods. In contrast, endoscopic optical coherence tomography (EOCT) can penetrate deeper into the tissue for high-resolution images of the microstructure, such as colon polyps, lung cancer [<xref ref-type="bibr" rid="B79">79</xref>]. Another prominent application area of EOCT is biopsy guidance with probe [<xref ref-type="bibr" rid="B80">80</xref>]. Thus, EOCT plays a crucial role in detecting, diagnosing, and monitoring organ diseases and provides a guideline for doctors during diagnosis and surgery (77, 78), which can accurately locate the pathological tissue that needs to be detected and distinguish the normal and abnormal physiological structure.</p>
<p>The central wavelength of EOCT used clinically is generally 1,300&#xa0;nm with an imaging depth between 1 and 2.5&#xa0;mm, suitable for evaluating the superficial tissue. However, to break the resolution limitation on EOCT and achieve ultrahigh-resolution OCT, the light source centered at 800&#xa0;nm is better [<xref ref-type="bibr" rid="B81">81</xref>, <xref ref-type="bibr" rid="B82">82</xref>]. Furthermore, incorporating the ultrahigh-resolution OCT with a gradient-index (GRIN)-lens micro-endoscope enables visualization at the cellular scale deep in living tissue [<xref ref-type="bibr" rid="B83">83</xref>], which is expected to study the development process of specific diseases <italic>in vivo</italic> and increase clinical applications.</p>
</sec>
<sec id="s3-4">
<title>Optical Coherence Tomography in Dermatology</title>
<p>OCT was first introduced into dermatology in 1997 by Welzel <italic>et&#x20;al.</italic>, who used this technique to image human skin. Skin biopsy and histopathological examination are the gold standards for detecting skin cancer [<xref ref-type="bibr" rid="B84">84</xref>, <xref ref-type="bibr" rid="B85">85</xref>]. However, invasive biopsy and a high rate of &#x201c;false positive&#x201d; impede the early diagnosis of cancer [<xref ref-type="bibr" rid="B86">86</xref>, <xref ref-type="bibr" rid="B87">87</xref>]. Compared with traditional detection methods, OCT with high-resolution can visually the epidermis, dermis-dermal junction (DEJ), dermis, hair follicles, sweat glands, and blood vessels, and other structures and show the morphological characteristics of the pathological structure in the skin [<xref ref-type="bibr" rid="B88">88</xref>], which is suitable for imaging the superficial layers of the&#x20;skin.</p>
<p>Since skin is opaque, the beam will be scattered and absorbed in the propagation process, while the absorption is much smaller than the scattering at the near-infrared spectrum. Thus, commercial OCT used in dermatology always operates in the NIR region [<xref ref-type="bibr" rid="B89">89</xref>]. The new OCT system can better visualize the skin structure [<xref ref-type="bibr" rid="B90">90</xref>, <xref ref-type="bibr" rid="B91">91</xref>]. It can diagnose different subtypes of skin cancer and accurately determine the tumor boundaries, which helps diagnose disease and clinical treatment detection.</p>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>Over decades, OCT, as a novel 3D imaging method that is noninvasive and convenient, has been applied in many fields and has become a golden standard in retinal examination. However, the axial resolution, imaging depth, and imaging speed are the critical factors of OCT that limit its performance, as summarized above. In the development process, the performance of OCT has made a qualitative leap through updating the light source and spectral technology. However, there are still many problems in practical applications.</p>
<p>The axial resolution of OCT can reach micron level, and the full-field OCT reached 0.8&#xa0;&#xb5;m axial resolution almost 10&#xa0;years ago [<xref ref-type="bibr" rid="B21">21</xref>], which is much better than ultrasound and nuclear magnetic resonance imaging. However, the current commercial OCT system still cannot fully meet imaging requirements, thus limits its application in more fields. For example, OCT can provide the structural image of the retina and observe fundus lesions that other methods cannot observe, but OCT cannot distinguish the tissues with similar reflectivities, such as vascular and fiber composition [<xref ref-type="bibr" rid="B33">33</xref>, <xref ref-type="bibr" rid="B47">47</xref>]. Thus, OCT can only provide supplementary information for fundus examination but not replace microscopic imaging and fluorescence imaging [<xref ref-type="bibr" rid="B41">41</xref>]. In addition, while in otology, it is not easy to obtain the cellular-resolution image of the organ of Corti using OCT, which is crucial to understand the cochlear mechanism thoroughly. The restriction between axial resolution and imaging depth is the biggest problem that limits the application of&#x20;OCT.</p>
<p>The axial resolution is determined by the center wavelength and the light source bandwidth from the theory. The high-resolution can be achieved by a short-wavelength or ultra-broad bandwidth light source. However, the short wavelength light sources will decrease the imaging depth, and the use of broad bandwidth light sources is relatively limited due to the technology, the cost, or other reasons. Besides, the absorption and scattering of the tissue also need to be taken into account. The absorption of tissue will change with the wavelength of the light source. The absorption increases gradually as the wavelength becomes longer in the visible light range, which means the water absorbs less light at short wavelengths, while in the near-infrared region, the situation is different [<xref ref-type="bibr" rid="B14">14</xref>], and there are several absorption peaks irregularly in NIR-II. With higher resolution and more specific spectral information than NIR, visible light OCT may be a promising imaging method in the future, and it can provide accurate information in observation. However, to compromise resolution and other limitations, the center wavelength of commercial OCT is mainly concentrated in NIR-II [<xref ref-type="bibr" rid="B49">49</xref>]. The innovation of OCT is closely related to the development of new light sources. The emergence of the femtosecond laser, supercontinuum light source, superluminescent diodes, and swept-source creates new opportunities for resolution improvement. The micro-OCT with supercontinuum light source can provide 1&#x2013;2&#xa0;&#x3bc;m spatial resolution both in the axial and lateral directions [<xref ref-type="bibr" rid="B92">92</xref>], which meet the requirements for imaging the fine structures but have not yet been commercialized. In 2020, a high resolution was achieved by converting monochromatic light into an extended light source without using dispersion compensation [<xref ref-type="bibr" rid="B93">93</xref>], which may improve the performance of FF-OCT. Furthermore, a recent study used a supercontinuum light source in the spectral range from 3,140 to 4,190&#xa0;<inline-formula id="inf15">
<mml:math id="m20">
<mml:mrow>
<mml:mo>&#xa0;</mml:mo>
<mml:mtext>&#xb5;m</mml:mtext>
</mml:mrow>
</mml:math>
</inline-formula>, obtaining high sensitivity and high axial resolution below 8&#xa0;<inline-formula id="inf16">
<mml:math id="m21">
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, which is comparable to general commercial OCT [<xref ref-type="bibr" rid="B94">94</xref>]. Therefore, there are huge space for development of mid-infrared OCT with high imaging depth, applied to real-time non-destructive inspection.</p>
<p>The imaging speed has been improved by the FD-OCT, which avoids mirror movements in the reference arm. Nevertheless, while using the OCT to obtain the retina examination, the movement of the eyeball will lead to motion artifacts which influence the imaging contrast [<xref ref-type="bibr" rid="B95">95</xref>-<xref ref-type="bibr" rid="B97">97</xref>], and the shorter time also can keep the sample to be tested in good condition <italic>in situ</italic>. At the same time, the faster OCT will have better performance in practical applications. The enhancement of the optical components can be realized by ameliorating the light source or the light path. A necessary condition for fast scanning is to use a powerful radiation source with a high signal-to-noise ratio. However, the safety of the light source also needs to be considered as high power can easily burn the retina and cause irreversible damage. Therefore, in addition to improving the performance of the components, the use of multi-beam optical paths can simultaneously increase the imaging speed and realize the rational use of optical power. Several designs based on the multi-beam scanning technique have improved imaging speed and achieved high power output more safely [<xref ref-type="bibr" rid="B80">80</xref>, <xref ref-type="bibr" rid="B98">98</xref>]. Research in 2017 based on SS-OCT divided the light source into four beams according to the wavelength and focused the different beams at different depths using the beam with long-wavelength to image the deep tissues. It improved the resolution and speed and realized SNR improvement as great as 10&#xa0;dB [<xref ref-type="bibr" rid="B97">97</xref>]. Besides, recent research demonstrated an eight-beam light OCT to scan the different cross-sections and obtained high speed and low loss closed to a single beam system&#x20;[<xref ref-type="bibr" rid="B99">99</xref>].</p>
<p>In addition, the ability of image processing technology to improve OCT image quality should not be underestimated, which has been a central focus of the current research. On the one hand, the OCT system will inevitably introduce much noise during the imaging process, reducing the image contrast and failing to obtain the resolution in theory [<xref ref-type="bibr" rid="B37">37</xref>, <xref ref-type="bibr" rid="B100">100</xref>]. With the development and improvement of digital image processing technology, algorithms such as Gaussian filtering, morphological expansion, and corrosion can preserve image features while simultaneously removing shot noise as much as possible to make the image more explicit. An algorithm that uses multilevel filtering and digital morphological processing can effectively remove shot noise and is suitable for OCT and ultrasound [<xref ref-type="bibr" rid="B101">101</xref>]. For OCTA, several algorithms can improve the signal contrast, such as phase variance, improved speckle contrast, and optical microangiography, and a recent study showed that the latter two methods have better robustness [<xref ref-type="bibr" rid="B102">102</xref>].</p>
<p>On the other hand, we also need to pay attention to computer-aided diagnosis, which is exceptionally significant for rapid and automated clinical diagnosis. Due to the high resolution of OCT, the images it gets usually have a larger volume, and it is difficult for doctors to judge the condition of the lesion accurately in a short time. However, computer-aided diagnosis has a much higher resolution than the human eye and can accurately analyze and judge the hidden information in the OCT image. Some segmentation algorithms such as Iowa Reference Algorithm could avoid the error caused by manual segmentation [<xref ref-type="bibr" rid="B103">103</xref>], thus achieving a more accurate diagnosis. With the continuous development of machine learning [<xref ref-type="bibr" rid="B54">54</xref>, <xref ref-type="bibr" rid="B57">57</xref>], computer-aided diagnosis is expected to realize automatic image reading and change the diagnostic model of traditional medicine in the future, which can not only reduce the workload of doctors but also may alleviate the shortage of medical resources to a certain extent.</p>
<p>In clinical applications, the compactness, user-friendliness, and stability of the OCT system also need to be considered. The fiber-based OCT solves long-distance transmission while avoiding large incisions during surgery [<xref ref-type="bibr" rid="B104">104</xref>, <xref ref-type="bibr" rid="B105">105</xref>]. However, other interferences can also be caused due to the absorption and scattering characteristics of the optical fiber, which may be reduced by several optical components such as the achromatic lens and sophisticated optical design. The OCT, as a noninvasive 3D imaging approach, is expected to provide real-time imaging in surgery and obtain high-definition imaging of specific organs or tissue.</p>
</sec>
<sec sec-type="conclusion" id="s5">
<title>Conclusion</title>
<p>As a high-resolution three-dimensional imaging technology, OCT has qualitatively changed the imaging performance in the biomedical field since its appearance, which has improved early diagnosis and monitoring of diseases and has broken through the previous limitations in many types of research. With the continuous improvement of optical system performance, OCT is expected to provide real-time 3D observation of biological tissues <italic>in situ</italic> with high-resolution, high imaging speed, low cost in more imaging fields.</p>
</sec>
</body>
<back>
<sec id="s6">
<title>Author Contributions</title>
<p>GN, SZ, PL, ZX YB contributed to the outline and substantial content, drafted and revised the manuscripts of important content. GN and SZ critically edited the manuscript. All authors approved the final version and agree to be responsible for all aspects of the&#x20;work.</p>
</sec>
<sec id="s7">
<title>Funding</title>
<p>This work was supported by grants from the National Natural Science Foundation of China (81971698) and Beijing-Tianjin-Hebei Basic Research Cooperation Project (18JCZDJC45300).</p>
</sec>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s9">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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