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<journal-id journal-id-type="publisher-id">Front. Pharmacol.</journal-id>
<journal-title>Frontiers in Pharmacology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Pharmacol.</abbrev-journal-title>
<issn pub-type="epub">1663-9812</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-meta>
<article-id pub-id-type="publisher-id">1528235</article-id>
<article-id pub-id-type="doi">10.3389/fphar.2025.1528235</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Pharmacology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Design, synthesis and antiproliferative activity of novel colchicine derivatives: selective inhibition of melanoma cell proliferation</article-title>
<alt-title alt-title-type="left-running-head">Kumar et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fphar.2025.1528235">10.3389/fphar.2025.1528235</ext-link>
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<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Kumar</surname>
<given-names>Puneet</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
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<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Kotra</surname>
<given-names>Tusharika</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
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<contrib contrib-type="author">
<name>
<surname>Lone</surname>
<given-names>Waseem I.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<contrib contrib-type="author">
<name>
<surname>Arfath</surname>
<given-names>Yassir</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<xref ref-type="aff" rid="aff3">
<sup>3</sup>
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<contrib contrib-type="author">
<name>
<surname>Tiwari</surname>
<given-names>Harshita</given-names>
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<xref ref-type="aff" rid="aff4">
<sup>4</sup>
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<contrib contrib-type="author">
<name>
<surname>Shukla</surname>
<given-names>Ashutosh Kumar</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
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<contrib contrib-type="author">
<name>
<surname>Ahmed</surname>
<given-names>Zabeer</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<xref ref-type="aff" rid="aff3">
<sup>3</sup>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Rayees</surname>
<given-names>Sheikh</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<xref ref-type="aff" rid="aff3">
<sup>3</sup>
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<xref ref-type="corresp" rid="c001">&#x2a;</xref>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Anal</surname>
<given-names>Jasha Momo H.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
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<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<aff id="aff1">
<sup>1</sup>
<institution>Natural Products and Medicinal Chemistry Division</institution>, <institution>CSIR-Indian Institute of Integrative Medicine</institution>, <addr-line>Jammu</addr-line>, <country>India</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Academy of Scientific and Innovative Research (AcSIR)</institution>, <addr-line>Ghaziabad</addr-line>, <country>India</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Pharmacology Division</institution>, <institution>CSIR-Indian Institute of Integrative Medicine</institution>, <addr-line>Jammu</addr-line>, <country>India</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Drug Chemistry Research Centre</institution>, <addr-line>Indore</addr-line>, <country>India</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/405272/overview">Jos&#xe9; Carlos Men&#xe9;ndez</ext-link>, Complutense University of Madrid, Spain</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/127321/overview">Debasish Bandyopadhyay</ext-link>, The University of Texas Rio Grande Valley, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2017632/overview">Souvik Banerjee</ext-link>, Middle Tennessee State University, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Jasha Momo H. Anal, <email>hmunshel.jasha@iiim.res.in</email>; Sheikh Rayees, <email>rayees.h@iiim.res.in</email>
</corresp>
<fn fn-type="equal" id="fn001">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this work</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>27</day>
<month>06</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>16</volume>
<elocation-id>1528235</elocation-id>
<history>
<date date-type="received">
<day>14</day>
<month>11</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>28</day>
<month>05</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Kumar, Kotra, Lone, Arfath, Tiwari, Shukla, Ahmed, Rayees and Anal.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Kumar, Kotra, Lone, Arfath, Tiwari, Shukla, Ahmed, Rayees and Anal</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Colchicine binds to tubulin and destabilizes microtubules, stopping cell division and causing apoptosis. Its anti-cancer property affects microtubule integrity despite its reported toxicity. A series of novel colchicine derivatives were synthesized using the multi-component reaction method and evaluated for their antiproliferative properties, aiming to enhance their efficacy as anti-cancer agents compared to the parent compound, colchicine. With the SRB assay, we tested these derivatives for their anti-cancer efficacy against lung, breast, and melanoma using several human cancer cell lines, including A549, MCF-7, MDAMB-231, and A375. The study identified a derivative, <bold>3g</bold>, as notably more effective against melanoma cells, with a selectivity index about two times higher than colchicine. We further investigated the anti-cancer efficacy of compound <bold>3g</bold> on human melanoma cells using additional <italic>in vitro</italic> models, including the wound healing assay and colony formation assay. Compound <bold>3g</bold> inhibited colony formation by up to 62.5% and reduced the migration potential of melanoma cells by 69%. The <italic>in silico</italic> studies reveal the probable interactions with the colchicine binding sites that have a comparable pose to colchicine. <bold>3g</bold> formed a hydrogen bond with Cys241, Asn258 and a salt bridge with Lys352, which is important for its tubulin polymerization inhibitory activity. These findings suggest that <bold>3g</bold> could selectively target melanoma cells, minimizing toxicity to healthy cells and potentially providing a safer and more effective treatment option with improved therapeutic outcomes.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Colchicum autumnale</italic>
</kwd>
<kwd>colchicine</kwd>
<kwd>cancer</kwd>
<kwd>melanoma</kwd>
<kwd>proliferation</kwd>
<kwd>SRB assay</kwd>
</kwd-group>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Experimental Pharmacology and Drug Discovery</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Colchicine is a tropolone alkaloid natural product and an FDA-approved drug to treat gout and familial Mediterranean fever (<xref ref-type="bibr" rid="B30">Schlesinger et al., 2020</xref>). It is an antimitotic compound that binds to <italic>&#x3b2;</italic>-tubulin, destabilizes microtubules, and promotes depolymerization, leading to cell cycle arrest, apoptosis, and cell death (<xref ref-type="bibr" rid="B7">Ghawanmeh et al., 2018</xref>). Despite its ability to induce apoptosis, colchicine is not widely used as an anticancer drug, due to relatively high toxicity in the gastrointestinal tract, which is one of the three phases of toxicity that limit the use of certain compounds in cancer chemotherapy (<xref ref-type="bibr" rid="B5">Banerjee et al., 1997</xref>; <xref ref-type="bibr" rid="B12">Imazio et al., 2015</xref>; <xref ref-type="bibr" rid="B36">Tardif et al., 2022</xref>). Chemical modifications, derivatizations, and structure optimizations of colchicine at rings A, B, and C in colchicine result in functionality conversion and affect biological activity, which improved its therapeutic potential and safety profile (<xref ref-type="bibr" rid="B33">Singh et al., 2015</xref>; <xref ref-type="bibr" rid="B6">Dubey et al., 2017</xref>; <xref ref-type="bibr" rid="B8">Gracheva et al., 2020</xref>; <xref ref-type="bibr" rid="B13">Iqbal Lone et al., 2024</xref>). In recent years, a low-dose colchicine tablet branded as Lodoco was the first anti-inflammatory atheroprotective therapy for cardiovascular disease to reduce the risk of myocardial infarction, stroke, coronary revascularization, and cardiovascular death in adults (<xref ref-type="bibr" rid="B4">Banach and Penson, 2021</xref>; <xref ref-type="bibr" rid="B10">Halsey, 2023</xref>). Therefore, colchicine and its derivatives promise the potential of developing novel anti-cancer agents and therapeutic approaches (<xref ref-type="bibr" rid="B18">Kumar et al., 2017</xref>).</p>
<p>Cancer is a global public health challenge, marked by high prevalence, diverse types, and increasing incidence (<xref ref-type="bibr" rid="B2">Arnold et al., 2020</xref>). Advancing cancer drug discovery is imperative for improving treatments and reducing its impact on individuals and societies (<xref ref-type="bibr" rid="B11">Huang et al., 2021</xref>). Melanoma is an aggressive cancer with a high potential for metastasis. When it undergoes malignant transformation, it develops into one of the most lethal variants of skin cancer. While surgical excision is a frequently used successful treatment for early-stage melanomas, advanced cases have a grim prognosis, with an average survival duration of three to 11&#xa0;months. Recent high-throughput genomic screening has shown the diverse character of melanoma by identifying several mutations driving its progression, and the cytotoxic effects and multidrug resistance linked to existing chemotherapeutic drugs restrict the treatment options for melanoma. Even though melanoma accounts for only 5% of all skin cancer cases, it is the cause of over 75% of skin cancer-related deaths, and the rate of incidence of melanoma is still on the rise (<xref ref-type="bibr" rid="B34">Smalley, 2010</xref>; Khan et al., 2023).</p>
<p>In this study, we synthesized novel colchicine derivatives using the Biginelli Multi-component Reaction (MCR) method, which has been vastly valuable for drug discovery (<xref ref-type="bibr" rid="B16">Kaur et al., 2017</xref>; <xref ref-type="bibr" rid="B9">Grazia Martina et al., 2023</xref>; <xref ref-type="bibr" rid="B31">Shahi et al., 2024</xref>) and screened them for antiproliferative activity against a panel of human cancer cell lines.</p>
</sec>
<sec id="s2">
<title>2 Experimental procedure</title>
<sec id="s2-1">
<title>2.1 Extraction and isolation of colchicine and synthesis of colchicine aldehyde</title>
<p>A dried tuber (50.0 gm) of <italic>Gloriosa superba</italic> L. was extracted with MeOH: H<sub>2</sub>O (1:1) and colchicine was isolated by column chromatography using neutral alumina loaded with hexane. The eluting solvents chloroform and toluene in a ratio of 97:3. The fractions containing colchicine were collected, separated, and compared with standard colchicine, identified by thin layer chromatography (TLC); the fraction was evaporated in rotavaporatory and crystallized using chloroform as described in this procedure (<xref ref-type="bibr" rid="B15">Kannan et al., 2007</xref>). Purity of colchicine was determined by HPLC, as shown in <xref ref-type="fig" rid="F1">Figure 1</xref>. Then, colchicine (1.0 mmol) was dissolved in dichloromethane (DCM, 25&#xa0;mL) in a round-bottom flask, and dichloromethyl methyl ether (1.0&#xa0;mmol) was added to the solution. The reaction mixture was stirred at 0&#xb0;C for 30&#xa0;min. After that, tin chloride (1.5&#xa0;mmol) was added drop by drop to the reaction mixture, and stirring was continued at room temperature for 3.0&#xa0;h. Once the reaction was complete (monitored by TLC), it was slowly quenched with ice water. The product was extracted with ethyl acetate, and the combined organic layer was dried with anhydrous sodium sulfate. The solution was concentrated using a rotary evaporator, and the residue was purified by silica gel column chromatography using hexane and ethyl acetate to obtain the pure product (<xref ref-type="bibr" rid="B13">Iqbal Lone et al., 2024</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>HPLC chromatogram of colchicine at &#x3bb;254&#xa0;nm.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g001.tif"/>
</fig>
</sec>
<sec id="s2-2">
<title>2.2 Synthesis of colchicine derivatives</title>
<p>For the preparation of colchicine derivatives <bold>3a</bold> to <bold>3j</bold>, colchicine aldehyde <bold>(2)</bold> (1.0&#xa0;mmol) and <italic>&#x3b2;</italic>-keto ester (2.0&#xa0;mmol) were dissolved in ethanol (25&#xa0;mL), taken in a round bottom flask after ammonia/urea/thiourea was added (2.0&#xa0;mmol) dropwise. Then zinc chloride was added in a catalytic amount (0.3&#xa0;mmol) and refluxed the mixture at 80&#xb0;C for 5&#xa0;h. After the reaction (product monitored by TLC) was completed, it was quenched slowly with sodium bicarbonate dissolved in water (for neutralizing acid). The pure product was obtained after column chromatography.</p>
<p>Compound <bold>3a</bold>: 4-((<italic>R</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-6-methyl-2-thioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.29&#x2013;7.20 (m, 2H), 7.10 (d, <italic>J</italic> &#x3d; 10.6 Hz, 1H), 4.38 (s, 1H), 3.93 (d, <italic>J</italic> &#x3d; 4.4 Hz, 1H), 3.89 (d, <italic>J</italic> &#x3d; 7.5 Hz, 3H), 3.81 (dd, <italic>J</italic> &#x3d; 16.6, 8.2 Hz, 6H), 3.45 (d, <italic>J</italic> &#x3d; 3.9 Hz, 3H), 2.16 (d, <italic>J</italic> &#x3d; 16.6 Hz, 3H), 2.02 (dd, <italic>J</italic> &#x3d; 17.5, 12.3 Hz, 1H), 1.90 (s, 3H), 1.72&#x2013;1.62 (m, 1H), 1.19 (d, <italic>J</italic> &#x3d; 7.4 Hz, 3H), 0.91&#x2013;0.79 (m, 3H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.56, 171.32, 166.14, 164.18, 152.70, 151.02, 136.99, 136.41, 132.93, 129.33, 113.53, 60.23, 60.17, 60.07, 59.53, 55.65, 52.42, 34.87, 31.69, 30.76, 29.38, 29.10, 28.68, 24.63, 22.36, 21.05, 16.74, 13.19, 13.08. LC-MS (ESI) calcd for Chemical Formula: C<sub>30</sub>H<sub>35</sub>N<sub>3</sub>O<sub>8</sub>S 598.2223 and, found 598.2226.</p>
<p>Compound <bold>3b</bold>: Ethyl 4-((<italic>R</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-2-imino-6-methyl-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.28&#x2013;7.21 (m, 2H), 7.09 (dd, <italic>J</italic> &#x3d; 11.0, 4.4 Hz, 1H), 4.37 (dd, <italic>J</italic> &#x3d; 11.8, 6.0 Hz, 1H), 3.89 (d, <italic>J</italic> &#x3d; 8.3 Hz, 3H), 3.81 (d, <italic>J</italic> &#x3d; 4.4 Hz, 5H), 3.44 (d, <italic>J</italic> &#x3d; 7.4 Hz, 3H), 2.18 (s, 3H), 2.07&#x2013;1.96 (m, 1H), 1.90 (d, <italic>J</italic> &#x3d; 3.0 Hz, 3H), 1.69 (dd, <italic>J</italic> &#x3d; 11.7, 5.8 Hz, 1H), 1.19 (s, 1H), 0.90 (dt, <italic>J</italic> &#x3d; 31.2, 7.0 Hz, 3H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.57, 171.32, 164.16, 152.67, 150.69, 129.70, 129.31, 129.18, 113.54, 60.19, 60.02, 59.34, 59.31, 55.63, 52.41, 52.34, 34.95, 29.39, 24.56, 21.01, 20.98, 17.24, 13.21. LC-MS (ESI) calcd for Chemical Formula: C<sub>30</sub>H<sub>36</sub>N<sub>4</sub>O<sub>8</sub> Exact Mass: 581.25, found 582.22.</p>
<p>Compound <bold>3c</bold>: phenyl 4-((R)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-6-methyl-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) <italic>&#x3b4;</italic> 7.25&#x2013;7.19 (m, 1H), 7.10 (d, <italic>J</italic> &#x3d; 2.5 Hz, 2H), 7.02 (s, 2H), 6.91&#x2013;6.81 (m, 2H), 5.00 (dd, <italic>J</italic> &#x3d; 26.7, 12.5 Hz, 1H), 4.68 (d, <italic>J</italic> &#x3d; 12.2 Hz, 1H), 4.31 (dd, <italic>J</italic> &#x3d; 11.7, 6.3 Hz, 1H), 3.92 (s, 3H), 3.75 (d, <italic>J</italic> &#x3d; 12.0 Hz, 5H), 3.44 (s, 3H), 2.88 (dd, <italic>J</italic> &#x3d; 14.0, 4.8 Hz, 1H), 2.19 (d, <italic>J</italic> &#x3d; 18.6 Hz, 3H), 2.09 (s, 1H), 1.84 (d, <italic>J</italic> &#x3d; 3.8 Hz, 3H), 1.55&#x2013;1.39 (m, 1H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.54, 171.28, 166.05, 164.10, 150.63, 136.50, 136.29, 129.18, 128.04, 127.51, 113.51, 65.23, 60.22, 60.02, 55.70, 52.39, 34.98, 24.12, 21.04, 20.97, 17.37. LC-MS (ESI) calcd for Chemical Formula: C<sub>34</sub>H<sub>35</sub>N<sub>3</sub>O<sub>9</sub> Exact Mass: 629.24 and, found 644.30 [M&#x2b;Na]<sup>&#x2b;</sup>.</p>
<p>Compound <bold>3d</bold>: Ethyl 4-((<italic>R</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-2-oxo-6-(trichloromethyl)-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) <italic>&#x3b4;</italic> 7.23 (ddd, <italic>J</italic> &#x3d; 23.2, 13.9, 7.6 Hz, 2H), 7.10 (d, <italic>J</italic> &#x3d; 10.9 Hz, 1H), 4.40&#x2013;4.27 (m, 1H), 4.12&#x2013;3.99 (m, 1H), 3.96&#x2013;3.92 (m, 2H), 3.91 (s, 3H), 3.89&#x2013;3.79 (m, 6H), 3.51 (s, 1H), 3.47 (q, <italic>J</italic> &#x3d; 4.5 Hz, 3H), 2.23&#x2013;2.00 (m, 2H), 1.92 (d, <italic>J</italic> &#x3d; 2.1 Hz, 3H), 1.81&#x2013;1.70 (m, 1H), 1.22&#x2013;1.11 (m, 3H), 1.01&#x2013;0.67 (m, 2H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 184.25, 179.57, 171.37, 164.40, 164.30, 164.26, 153.73, 152.29, 151.82, 136.61, 136.55, 136.49, 136.37, 129.38, 129.31, 113.43, 88.61, 60.40, 60.33, 60.30, 60.22, 60.16, 55.68, 52.16, 51.73, 35.04, 29.37, 21.01, 12.97, 12.61. LC-MS (ESI) calcd for Chemical Formula: C<sub>30</sub>H<sub>32</sub>Cl<sub>3</sub>N<sub>3</sub>O<sub>9</sub> Exact Mass: 683.12 and, found 704.20 [M&#x2b;Na]<sup>&#x2b;</sup>.</p>
<p>Compound <bold>3e</bold>: Ethyl 4-((<italic>R</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-6-(2,6-dichloro-5-fluoropyridin-3-yl)-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) <italic>&#x3b4;</italic> 7.71 (ddd, <italic>J</italic> &#x3d; 20.5, 10.9, 6.7 Hz, 1H), 7.29&#x2013;7.23 (m, 2H), 7.10 (d, <italic>J</italic> &#x3d; 11.0 Hz, 1H), 4.38 (dd, <italic>J</italic> &#x3d; 11.6, 6.0 Hz, 1H), 3.96 (dd, <italic>J</italic> &#x3d; 17.5, 8.2 Hz, 3H), 3.91 (s, 3H), 3.86 (d, <italic>J</italic> &#x3d; 6.4 Hz, 2H), 3.81 (s, 1H), 3.78&#x2013;3.70 (m, 1H), 3.62 (ddd, <italic>J</italic> &#x3d; 13.9, 7.0, 4.0 Hz, 1H), 3.47 (t, <italic>J</italic> &#x3d; 4.1 Hz, 3H), 2.09 (dd, <italic>J</italic> &#x3d; 15.1, 5.2 Hz, 1H), 1.90 (s, 3H), 1.74 (dd, <italic>J</italic> &#x3d; 17.0, 8.0 Hz, 1H), 1.19 (s, 1H), 0.72&#x2013;0.60 (m, 3H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.58, 175.01, 171.33, 164.20, 129.28, 119.17, 116.70, 113.49, 110.59, 60.51, 60.21, 60.16, 60.12, 60.07, 59.92, 58.84, 55.63, 52.43, 52.36, 52.32, 31.15, 29.37, 20.99, 20.65, 12.70. LC-MS (ESI) calcd for Chemical Formula: C<sub>34</sub>H<sub>33</sub>C<sub>l2</sub>FN<sub>4</sub>O<sub>9</sub> Exact Mass: 731.1687 and, found 731.1685.</p>
<p>Compound <bold>3f</bold>: Ethyl 4-((<italic>R</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-2-oxo-6-(perfluoroethyl)-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.26 (s, 2H), 7.21 (d, <italic>J</italic> &#x3d; 10.7 Hz, 2H), 7.10 (d, <italic>J</italic> &#x3d; 11.1 Hz, 3H), 5.17 (d, <italic>J</italic> &#x3d; 11.2 Hz, 2H), 4.31&#x2013;4.22 (m, 4H), 3.92&#x2013;3.89 (m, 15H), 3.87 (d, <italic>J</italic> &#x3d; 3.7 Hz, 7H), 3.83&#x2013;3.75 (m, 10H), 3.47 (s, 6H), 1.91 (s, 8H), 1.19 (s, 4H), 0.83 (t, <italic>J</italic> &#x3d; 7.1 Hz, 7H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.57, 171.18, 169.77, 164.31, 154.65, 152.23, 151.92, 145.88, 136.48, 134.05, 129.44, 129.38, 121.54, 113.43, 61.06, 60.38, 60.26, 60.24, 55.67, 53.42, 52.09, 48.88, 34.71, 25.80, 24.97, 20.95, 13.03. LC-MS (ESI) calcd for Chemical Formula: C<sub>31</sub>H<sub>32</sub>F<sub>5</sub>N<sub>3</sub>O<sub>9</sub> Exact Mass: 685.21 and, found 704.20 [M&#x2b;Na]<sup>&#x2b;</sup>.</p>
<p>Compound <bold>3g</bold>: Ethyl 4-((<italic>S</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-2-oxo-6-(perfluoroethyl)-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.26 (s, 1H), 7.22 (d, <italic>J</italic> &#x3d; 10.8 Hz, 1H), 7.10 (d, <italic>J</italic> &#x3d; 11.0 Hz, 1H), 4.37 (dd, <italic>J</italic> &#x3d; 11.9, 6.3 Hz, 1H), 4.03 (d, <italic>J</italic> &#x3d; 11.2 Hz, 1H), 3.93 (s, 2H), 3.91 (s, 2H), 3.86 (s, 1H), 3.83 (s, 2H), 3.82 (s, 1H), 3.46 (d, <italic>J</italic> &#x3d; 1.7 Hz, 3H), 1.94 (s, 1H), 1.91 (s, 2H), 1.84 (s, 1H), 1.19 (s, 1H), 0.77 (d, <italic>J</italic> &#x3d; 7.1 Hz, 2H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.57, 171.38, 169.11, 164.26, 154.53, 152.31, 151.79, 146.18, 136.53, 136.31, 133.99, 129.47, 129.42, 121.91, 113.42, 60.80, 60.20, 60.13, 55.68, 55.66, 52.18, 35.06, 20.98, 12.67. LC-MS (ESI) calcd for Chemical Formula: C<sub>31</sub>H<sub>32</sub>F<sub>5</sub>N<sub>3</sub>O<sub>9</sub> Exact Mass: 685.21 and, found 704.20 [M&#x2b;Na]<sup>&#x2b;</sup>.</p>
<p>Compound <bold>3h</bold>: ethyl 4-((<italic>R</italic>)-7-acetamido-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-4-yl)-6-ethoxy-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxylate.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.26 (s, 1H), 7.18 (d, <italic>J</italic> &#x3d; 10.8 Hz, 1H), 7.09 (d, <italic>J</italic> &#x3d; 11.1 Hz, 1H), 5.84 (d, <italic>J</italic> &#x3d; 11.3 Hz, 1H), 4.27 (dd, <italic>J</italic> &#x3d; 12.0, 6.5 Hz, 1H), 4.17&#x2013;4.08 (m, 2H), 4.04 (s, 3H), 4.01 (d, <italic>J</italic> &#x3d; 11.3 Hz, 1H), 3.90 (s, 3H), 3.76 (ddd, <italic>J</italic> &#x3d; 17.9, 12.5, 7.1 Hz, 2H), 3.45 (s, 3H), 2.44&#x2013;2.32 (m, 1H), 1.97 (dd, <italic>J</italic> &#x3d; 13.9, 6.2 Hz, 1H), 1.90 (s, 3H), 1.70 (td, <italic>J</italic> &#x3d; 12.1, 5.5 Hz, 1H), 1.18 (t, <italic>J</italic> &#x3d; 7.1 Hz, 3H), 0.81 (t, <italic>J</italic> &#x3d; 7.1 Hz, 3H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.59, 171.42, 167.37, 166.94, 164.17, 159.21, 153.03, 152.61, 151.09, 144.85, 136.97, 136.10, 132.80, 129.41, 128.89, 124.62, 113.46, 78.08, 61.45, 61.04, 60.22, 60.17, 56.98, 55.62, 52.34, 35.01, 25.11, 21.01, 13.02, 12.76. LC-MS (ESI) calcd for Chemical Formula: C<sub>31</sub>H<sub>37</sub>N<sub>3</sub>O<sub>10</sub> Exact Mass: 611.25 and, found 630 [M&#x2b;NH<sub>4</sub>]<sup>&#x2b;</sup>.</p>
<p>Compound <bold>3i</bold>: <italic>N</italic>-((7<italic>R</italic>)-4-(5-(cyclopropanecarbonyl)-6-methoxy-2-oxo-1,2,3,4-tetrahydro pyrimidin-4-yl)-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-7-yl) acetamide.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.29&#x2013;7.22 (m, 2H), 7.09 (dd, <italic>J</italic> &#x3d; 10.7, 5.7 Hz, 1H), 5.75 (s, 1H), 4.38 (dd, <italic>J</italic> &#x3d; 9.0, 4.9 Hz, 1H), 3.89 (d, <italic>J</italic> &#x3d; 11.4 Hz, 3H), 3.82 (d, <italic>J</italic> &#x3d; 10.6 Hz, 6H), 3.45 (d, <italic>J</italic> &#x3d; 9.3 Hz, 3H), 3.40 (d, <italic>J</italic> &#x3d; 17.8 Hz, 3H), 2.83&#x2013;2.61 (m, 1H), 2.32&#x2013;2.16 (m, 1H), 2.02 (td, <italic>J</italic> &#x3d; 14.1, 6.0 Hz, 1H), 1.90 (d, <italic>J</italic> &#x3d; 10.2 Hz, 3H), 1.77&#x2013;1.63 (m, 1H), 1.19 (s, 1H), 0.84 (d, <italic>J</italic> &#x3d; 8.4 Hz, 3H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.58, 171.34, 171.30, 167.08, 164.17, 164.15, 152.75, 152.59, 150.72, 150.65, 145.43, 136.37, 132.72, 129.39, 129.33, 129.22, 113.55, 60.18, 60.02, 59.94, 55.63, 52.41, 52.22, 49.93, 49.91, 35.01, 24.17, 21.03, 21.01, 11.36 LC-MS (ESI) calcd for Chemical Formula: C<sub>31</sub>H<sub>35</sub>N<sub>3</sub>O<sub>9</sub> Exact Mass: 594.2452 and, found 594.2453.</p>
<p>Compound <bold>3j</bold>: <italic>N</italic>-((7<italic>S</italic>)-4-(5-(cyclopropanecarbonyl)-6-methoxy-2-oxo-1,2,3,4-tetrahydro pyrimidin-4-yl)-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo [a]heptalen-7-yl) acetamide.</p>
<p>
<sup>1</sup>H NMR (400&#xa0;MHz, MeOD) &#x3b4; 7.29&#x2013;7.23 (m, 2H), 7.10 (dd, <italic>J</italic> &#x3d; 11.1, 4.5 Hz, 1H), 4.38 (dd, <italic>J</italic> &#x3d; 11.9, 6.1 Hz, 1H), 3.90 (d, <italic>J</italic> &#x3d; 9.4 Hz, 3H), 3.84 (s, 3H), 3.80 (d, <italic>J</italic> &#x3d; 5.3 Hz, 3H), 3.55 (dd, <italic>J</italic> &#x3d; 12.4, 5.5 Hz, 2H), 3.45 (d, <italic>J</italic> &#x3d; 3.4 Hz, 3H), 3.39 (d, <italic>J</italic> &#x3d; 16.3 Hz, 3H), 2.74&#x2013;2.65 (m, 2H), 1.99 (dd, <italic>J</italic> &#x3d; 14.5, 7.3 Hz, 3H), 1.91 (d, <italic>J</italic> &#x3d; 4.0 Hz, 3H), 1.69 (td, <italic>J</italic> &#x3d; 11.9, 6.0 Hz, 1H), 1.19 (s, 1H). <sup>13</sup>C NMR (101&#xa0;MHz, MeOD) &#x3b4; 179.57, 171.35, 166.40, 164.14, 152.59, 150.78, 150.64, 136.48, 132.81, 129.48, 129.25, 129.23, 113.57, 60.23, 60.16, 60.05, 60.02, 55.63, 52.41, 52.24, 49.92, 43.76, 43.68, 31.16, 28.92, 24.20, 21.03. LC-MS (ESI) calcd for Chemical Formula: C<sub>31</sub>H<sub>35</sub>N<sub>3</sub>O<sub>9</sub> Exact Mass: 594.2452 and, found 594.2453.</p>
</sec>
<sec id="s2-3">
<title>2.3 Antiproliferative study</title>
<sec id="s2-3-1">
<title>2.3.1 Cell culture and cell lines</title>
<p>Roswell Park Memorial Institute (RPMI)-1640 medium, Dulbecco&#x2019;s modified eagle medium high glucose (DMEM; Gibco) supplemented with 10% Fetal Bovine Serum (FBS; Gibco, and 1% antibiotic-antimycotic (Gibco; Anti-Anti 100x), phosphate-buffered saline (PBS; Gibco), 0.25% trypsin (Gibco), sodium pyruvate (Sigma-Aldrich), HEPES (Gibco). Human cancer cell lines A549 (lung carcinoma), MCF-7 (breast carcinoma), MDAMB-231 (breast carcinoma), A375 (melanoma), and normal human embryonic kidney cells (HEK-293) were taken from Dr. Sheikh Tasduq Abdullah and Dr. Boobalan Gopu (CSIR-IIIM).</p>
</sec>
<sec id="s2-3-2">
<title>2.3.2 <italic>In vitro</italic> cytotoxicity</title>
<sec id="s2-3-2-1">
<title>2.3.2.1 Sulforhodamine B (SRB) assay</title>
<p>Sulforhodamine B (SRB), a semi-automated colorimetric assay, was used to evaluate the anti-cancerous properties of indicated colchicine derivatives. Their activity was tested against human cancer cell lines A549 (lung carcinoma), MCF-7 (breast carcinoma), MDAMB-231 (breast carcinoma), and A375 (melanoma). The selectivity index (SI) was calculated against normal human embryonic kidney cells (HEK-293) to determine cytotoxic selectivity. The cells (7 &#xd7; 10<sup>3</sup> cells/well) were seeded on 96 well plates, followed by overnight incubation. Multiple concentrations (50&#xa0;&#xb5;M, 20&#xa0;&#xb5;M, 10&#xa0;&#xb5;M, 5&#xa0;&#xb5;M, and 1&#xa0;&#xb5;M) of compounds were used to treat the cells, except for control wells that contained only cells with media. After 48&#xa0;h of incubation, the cells attached to wells were fixed with 50&#xa0;&#xb5;L of chilled 50% TCA, and the plate was kept at 4&#xb0;C for 1&#xa0;h, as described previously (<xref ref-type="bibr" rid="B22">Malik et al., 2023</xref>; <xref ref-type="bibr" rid="B19">Kumar et al., 2024</xref>). The plate was washed (3&#x2013;4 times) with distilled water (250&#xa0;&#xb5;L/well) and air-dried for 24&#xa0;h. The next day, 100&#xa0;&#xb5;L of 0.4% SRB dye was added to each well, and the cells were incubated at room temperature for 1&#xa0;h. The plate contents were discarded and washed 3 times with 1% glacial acetic acid (250&#xa0;&#xb5;L/well), followed by one last wash with distilled water and air drying for another 24&#xa0;h. Subsequently, 100&#xa0;&#xb5;L of Tris base (10&#xa0;mM, pH 10.5) was added to each well to dissolve the dye bound to fixed cells. The dissolved dye indicating growth inhibition was quantified by calculating optical density at 540&#xa0;nm <italic>via</italic> microplate reader (Tecan infinite M200PRO, Switzerland). The IC<sub>50</sub> values were calculated using GraphPad Prism Software Version 5.0. A favorable Selectivity Index (SI) is the most relevant parameter to detect anti-cancer potential <italic>in vitro</italic> as it indicates drug safety against cancer cells versus normal cells, efficacy of the drug, and selectivity. The selectivity index is calculated by using the formula.<disp-formula id="equ1">
<mml:math id="m1">
<mml:mrow>
<mml:mtext mathvariant="bold">Selective</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">Index</mml:mtext>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold">I</mml:mi>
<mml:mi mathvariant="bold">C</mml:mi>
</mml:mrow>
<mml:mn mathvariant="bold">50</mml:mn>
</mml:msub>
</mml:mrow>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">in</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">Normal</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">cells</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold">I</mml:mi>
<mml:mi mathvariant="bold">C</mml:mi>
</mml:mrow>
<mml:mn mathvariant="bold">50</mml:mn>
</mml:msub>
</mml:mrow>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">in</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">Cancerous</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">cell</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">lines</mml:mtext>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
</p>
</sec>
<sec id="s2-3-2-2">
<title>2.3.2.2 MTT assay</title>
<p>Cell viability was assessed using the MTT assay, as outlined in previous studies (<xref ref-type="bibr" rid="B41">Majeed et al., 2014</xref>; <xref ref-type="bibr" rid="B40">Amin et al., 2025</xref>). Briefly, A549, A375, MCF-7 and MDA-MB231 cells (10 &#xd7; 10<sup>3</sup> cells/well) were seeded in 96-well plates and incubated for 24&#xa0;h at 37&#xb0;C in a 5% CO<sub>2</sub> atmosphere. After this incubation, the cells were treated with test compounds for another 48&#xa0;h. At 44<sup>th</sup> hour of treatment, the cells were incubated with MTT (2.5&#xa0;mg/mL) for additional 4&#xa0;h. At 48<sup>th</sup> hour, DMSO was added (100&#xa0;&#xb5;L/well), to dissolve formazan crystals. Absorbance was measured at 570&#xa0;nm. Cell viability was calculated relative to untreated controls. IC<sub>50</sub> values were determined from independent triplicate experiments using GraphPad&#x2122; Prism 8.0 software.</p>
</sec>
</sec>
<sec id="s2-3-3">
<title>2.3.3 Colony formation assay</title>
<p>A colony formation assay was performed to assess the ability of <bold>3g</bold> to inhibit the reproductive and colony forming ability of A375 cells. The cells were seeded into a 6-well plate with a 1 &#xd7; 10<sup>3</sup> cells/well density. Next day, the cells were treated with multiple concentrations of <bold>3g</bold>, such as 30&#xa0;&#xb5;M, 20&#xa0;&#xb5;M, 10&#xa0;&#xb5;M and 1&#xa0;&#xb5;M, in fresh media for 48&#xa0;h. The media was changed on alternate days till day 10, till untreated (negative control) became confluent. On day 10, the cells were washed with PBS, and colonies were observed under a microscope. The cells/colonies were fixed with 100% methanol for 20&#xa0;min at 4&#xb0;C and stained with 0.5% solution of crystal violet for 30&#xa0;min at room temperature, as described previously (<xref ref-type="bibr" rid="B19">Kumar et al., 2024</xref>). Subsequently, the dye was removed from plates, and excess dye was rinsed by washing it with distilled water (3&#x2013;5 times), followed by air drying. The colonies were counted using ImageJ software, and photographs were taken with a digital camera. The percentage of colonies formed was calculated using the formula mentioned below.<disp-formula id="equ2">
<mml:math id="m2">
<mml:mrow>
<mml:mtext mathvariant="bold">Colony</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">formation</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">rate</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">(%)</mml:mtext>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mtext mathvariant="bold">Number</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">of</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">colonies</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">in</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">treatment</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">group</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mtext mathvariant="bold">Number</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">of</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">colonies</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">in</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">control</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">group</mml:mtext>
</mml:mrow>
</mml:mfrac>
<mml:mo>&#xd7;</mml:mo>
<mml:mn mathvariant="bold">100</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
</p>
</sec>
<sec id="s2-3-4">
<title>2.3.4 Wound healing assay</title>
<p>Cell scratch assay, also known as wound healing assay, was performed to evaluate the impact of <bold>3g</bold> on migration of A375 cells. The cells were seeded into the 6-well plate with 4 &#xd7; 10<sup>3</sup> cells/well density. The next day, in fresh media, a horizontal scratch was administered in the 90% confluent monolayer using a sterile 200&#xa0;&#xb5;L tip, as described previously, with slight modification (<xref ref-type="bibr" rid="B19">Kumar et al., 2024</xref>). The cells were incubated for 48&#xa0;h with multiple concentrations of <bold>3g</bold> such as 30&#xa0;&#xb5;M, 20&#xa0;&#xb5;M, 10&#xa0;&#xb5;M and 1&#xa0;&#xb5;M. Wound healing was observed using a Digital Inverted Fluorescence Microscope (Life Technologies EVOS FLc). The percentage of wound healing was calculated as.<disp-formula id="equ3">
<mml:math id="m3">
<mml:mrow>
<mml:mtext mathvariant="bold">Wound</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">Closure</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">(%)</mml:mtext>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mtext mathvariant="bold">Wound</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">area</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">at</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mn mathvariant="bold">0.0</mml:mn>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">hr</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mtext mathvariant="bold">Wound</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">area</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">at</mml:mtext>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mn mathvariant="bold">48.0</mml:mn>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mtext mathvariant="bold">hrs</mml:mtext>
</mml:mrow>
</mml:mfrac>
<mml:mo>&#xd7;</mml:mo>
<mml:mn mathvariant="bold">100</mml:mn>
</mml:mrow>
</mml:math>
</disp-formula>
</p>
</sec>
<sec id="s2-3-5">
<title>2.3.5 Molecular docking experiment</title>
<p>Before molecular docking studies, colchicine and its derivative, <bold>3g</bold>, underwent preparation using the OpenBabel module within PyRx software (<xref ref-type="bibr" rid="B25">O&#x2019;Boyle et al., 2011</xref>). This process involved structural minimization via the universal force field (UFF) and subsequent conversion to PDBQT format, rendering them suitable for docking studies. The 3D structure of the tubulin target protein co-crystalized with the drug colchicine (PDB ID: 1SA0) was downloaded from the protein data bank. The structure was subsequently prepared using the Chimera DockPrep module by removing co-crystallized water, adding hydrogen atoms, and optimizing the pKa states (<xref ref-type="bibr" rid="B26">Pettersen et al., 2004</xref>). Chain B of the protein was used for molecular docking. The grid was generated around the drug colchicine at coordinates X &#x3d; 117.219, Y &#x3d; 90.179, and Z &#x3d; 6.289&#xa0;&#xc5; as described (<xref ref-type="bibr" rid="B24">Moussaoui et al., 2024</xref>). Molecular docking was performed using the AutoDock Vina module. The docking protocol was verified by redocking the co-crystalized colchicine to its binding site and comparing the root mean square deviation with the crystallized pose. After docking, the binding poses were visualized with the free Maestro visualizer.</p>
</sec>
<sec id="s2-3-6">
<title>2.3.6 Pharmacokinetic property prediction</title>
<p>Pharmacokinetic (PK) properties, including absorption, distribution, metabolism, excretion, and toxicity (ADMET), are critical for drug development. In this study, pkCSM web-based platform (<ext-link ext-link-type="uri" xlink:href="https://biosig.lab.uq.edu.au/pkcsm/">https://biosig.lab.uq.edu.au/pkcsm/</ext-link>) was used. For the prediction of ADMET properties. pkCSM uses graph-based signatures and machine learning algorithms to predict pharmacokinetic properties. It provides predictions for key ADMET parameters, such as water solubility, intestinal absorption, blood-brain barrier permeability, CYP450 interactions, and toxicity endpoints. For prediction of human liver microsomal stability PredMS (<ext-link ext-link-type="uri" xlink:href="https://predms.netlify.app">https://predms.netlify.app</ext-link>.), a random forest model based tool was used.</p>
</sec>
</sec>
</sec>
<sec sec-type="results|discussion" id="s3">
<title>3 Results and discussion</title>
<sec id="s3-1">
<title>3.1 Chemistry</title>
<p>Colchicine is a tricyclic system containing one six-membered and two seven-membered rings with an (<italic>R</italic>)-stereogenic center at the C-7 position. First, colchicine <bold>(1)</bold> was converted into colchicine aldehyde <bold>(2)</bold> at the C-4 position by using the dichloromethylmethyl ether, which acts as a formylating agent to formylate aromatic ring in the presence of Lewis acid tin tetrachloride at 0&#xb0;C to obtained colchicine aldehyde (<xref ref-type="scheme" rid="sch1">Scheme 1a</xref>). Further, we have synthesized colchicine derivatives using the Biginelli multi-component chemical reaction method to synthesize dihydropyrimidones. This multi-component reaction requires the colchicine aldehyde, <italic>&#x3b2;</italic>-keto ester, and urea/thiourea/guanidine (<xref ref-type="scheme" rid="sch1">Scheme 1b</xref>). For the synthesis <bold>3a</bold>, we used thiourea with ethyl acetoacetate as a <italic>&#x3b2;</italic>-keto ester. Guanidine and ethyl acetoacetate as <italic>&#x3b2;</italic>-keto ester were used to synthesize <bold>3b</bold>. The rest of the compounds (<bold>3c, 3d, 3e, 3f, 3g, 3h, 3i, and 3j</bold>) were synthesized using urea and different <italic>&#x3b2;</italic>-keto ester in the presence of ZnCl<sub>2</sub> catalytic amounts. We observed diastereomers in the case of compounds <bold>3f</bold> and <bold>3g</bold> and <bold>3i</bold> and <bold>3j</bold>, which were separated by HPLC, as shown in <bold>3f</bold>, <bold>3g</bold>, <bold>3i</bold>, and <bold>3j</bold>. In other compounds, we have only found single stereoisomers and other stereoisomers in a trace, so we only isolated the single compounds <bold>3a, 3b, 3c, 3d, 3e, and 3h</bold>.</p>
<fig id="sch1" position="float">
<label>SCHEME 1</label>
<caption>
<p>Synthesis of colchicine derivatives. Reagents and condition: <bold>(a)</bold> Dichloromethyl methyl ether (1.0&#xa0;mmol), SnCl<sub>2</sub> (1.5&#xa0;mmol), DCM, 0&#xb0;C, 70%; <bold>(b)</bold> &#x3b2;-keto ester (2.0&#xa0;mmol), guanidine/urea/thiourea (2.0&#xa0;mmol), ZnCl<sub>2</sub> (cat), ethanol, 80&#xb0;C, 10&#xa0;h, 50%&#x2013;60%.</p>
</caption>
<graphic xlink:href="FPHAR_fphar-2025-1528235_wc_sch1.tif"/>
</fig>
</sec>
<sec id="s3-2">
<title>3.2 Biology</title>
<p>We screened a series of colchicine derivatives for their <italic>in vitro</italic> cytotoxicity in different cancer cell lines. We used SRB assay, a semi-automated colorimetric assay to evaluate the antiproliferative activity on different human cancer cell lines such as A549 (lung carcinoma), MCF-7 (breast carcinoma), MDAMB-231 (breast carcinoma) and A375 (melanoma) (<xref ref-type="table" rid="T1">Table 1</xref>). To access the cytotoxic activity levels, the effect of individual derivatives was assessed on a healthy non-cancerous cell line (HEK-293) to confirm their selectivity towards cancerous cells. Among all the derivatives, <bold>3g</bold> resulted in a marked reduction in cell viability with a comparatively improved selectivity index compared to colchicine. Detailed information about half-maximal inhibitory concentration, IC<sub>50</sub> &#xb1; SD, and SI can be found in <xref ref-type="table" rid="T1">Table 1</xref>, demonstrating <bold>3g</bold> as a more selective cytotoxic agent against human melanoma cells than colchicine. It has improved selectivity (SI &#x3d; 1.52) with IC<sub>50</sub> (10.35 &#xb1; 0.56) (<xref ref-type="table" rid="T1">Table 1</xref>) and exhibits 60% growth inhibition at 20&#xa0;&#xb5;M in A375 cells (<xref ref-type="fig" rid="F2">Figure 2</xref>). Additionally, <bold>3g</bold> exhibited potent cytotoxicity against MCF-7 cells with IC<sub>50</sub> &#x3d; 15.69 &#xb1; 0.39 and a selectivity index of 1.005 (<xref ref-type="table" rid="T1">Table 1</xref>). The IC<sub>50</sub> and Selectivity index (SI) of <bold>3g</bold> against A375, a human melanoma cell line, as shown in <xref ref-type="fig" rid="F3">Figure 3</xref>. The IC<sub>50</sub> of Colchicine against mentioned human cancer cell lines has also been shown in <xref ref-type="sec" rid="s11">Supplementary Table S1</xref> along with Paclitaxel <italic>via</italic> MTT assay.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Half-maximal inhibitory concentration (IC<sub>50</sub>, &#xb5;mol/L) and selectivity index (SI) values of synthesized colchicine derivatives against various human cancer cell lines and a normal cell line using sulphorhodamine B assay.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left"/>
<th align="left">A375</th>
<th align="left"/>
<th align="left">MCF-7</th>
<th align="left"/>
<th align="left">MDA-MB 231</th>
<th align="left"/>
<th align="left">A549</th>
<th align="left"/>
<th align="left">HEK-293</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Compounds</td>
<td align="left">IC<sub>50</sub> (&#xb5;M)</td>
<td align="left">SI</td>
<td align="left">IC<sub>50</sub> (&#xb5;M)</td>
<td align="left">SI</td>
<td align="left">IC<sub>50</sub> (&#xb5;M)</td>
<td align="left">SI</td>
<td align="left">IC<sub>50</sub> (&#xb5;M)</td>
<td align="left">SI</td>
<td align="left">IC<sub>50</sub> (&#xb5;M)</td>
</tr>
<tr>
<td align="left">Colchicine</td>
<td align="left">0.076 &#xb1; 0.01</td>
<td align="left">0.802</td>
<td align="left">4.44 &#xb1; 0.28</td>
<td align="left">0.013</td>
<td align="left">4.83 &#xb1; 0.31</td>
<td align="left">0.012</td>
<td align="left">0.174 &#xb1; 0.028</td>
<td align="left">0.35</td>
<td align="left">0.061 &#xb1; 0.002</td>
</tr>
<tr>
<td align="left">3a</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">40.55 &#xb1; 0.91</td>
<td align="left">0.73</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">29.66 &#xb1; 0.07</td>
</tr>
<tr>
<td align="left">3b</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">44.72 &#xb1; 0.64</td>
<td align="left">0.85</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">38.33 &#xb1; 1.36</td>
</tr>
<tr>
<td align="left">3c</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">44.75 &#xb1; 0.68</td>
<td align="left">0.79</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">35.61 &#xb1; 2.97</td>
</tr>
<tr>
<td align="left">3d</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">43.79 &#xb1; 0.33</td>
<td align="left">0.82</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">36.09 &#xb1; 1.79</td>
</tr>
<tr>
<td align="left">3e</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">45.073 &#xb1; 0.73</td>
<td align="left">0.89</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">40.29 &#xb1; 1.71</td>
</tr>
<tr>
<td align="left">3f</td>
<td align="left">28.27 &#xb1; 2.19</td>
<td align="left">0.62</td>
<td align="left">26.39 &#xb1; 2.79</td>
<td align="left">0.67</td>
<td align="left">46.59 &#xb1; 0.86</td>
<td align="left">0.38</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">17.81 &#xb1; 1.30</td>
</tr>
<tr>
<td align="left">3g</td>
<td align="left">10.35 &#xb1; 0.56</td>
<td align="left">1.52</td>
<td align="left">15.69 &#xb1; 0.39</td>
<td align="left">1.005</td>
<td align="left">24.92 &#xb1; 2.70</td>
<td align="left">0.63</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">15.78 &#xb1; 0.81</td>
</tr>
<tr>
<td align="left">3h</td>
<td align="left">35.16 &#xb1; 2.79</td>
<td align="left">0.75</td>
<td align="left">49.92 &#xb1; 2.72</td>
<td align="left">0.53</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">26.55 &#xb1; 2.65</td>
</tr>
<tr>
<td align="left">3i</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">39.52 &#xb1; 1.36</td>
</tr>
<tr>
<td align="left">3j</td>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">&#x3e;50</td>
<td align="left"/>
<td align="left">38.97 &#xb1; 0.79</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>The IC<sub>50</sub> data are expressed as mean &#xb1; SD (<italic>n</italic> &#x3d; 3) and were determined using GraphPad&#x2122;. Prism 5.0 software. The selectivity index (SI) was calculated HEK-293 cell line (human embryonic kidney cells).</p>
</fn>
</table-wrap-foot>
</table-wrap>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Comparison of cell viability (%) of <bold>3g</bold> at different concentrations in different human cell lines. <bold>3g</bold> was tested for cell viability (<italic>n</italic> &#x3d; 3) at four different concentrations <bold>(A)</bold> 1&#xa0;&#xb5;M, <bold>(B)</bold> 5&#xa0;&#xb5;M, <bold>(C)</bold> 10&#xa0;&#xb5;M, <bold>(D)</bold> 20&#xa0;&#xb5;M. Cell viability graphs are expressed as mean &#xb1; SD (<italic>n</italic> &#x3d; 3) and plotted using GraphPad<sup>TM</sup> Prism 8.0 software. A375 cells were compared against other cancer cells for significance by applying One-way ANOVA with Dunnet&#x2019;s multiple comparison test. &#x2a;p &#x3c; 0.05, &#x2a;&#x2a;p &#x3c; 0.001.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g002.tif"/>
</fig>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>The bar graph illustrates the IC<sub>50</sub> and Selectivity index (SI) of <bold>3g</bold> against A375, a human melanoma cell line. The graphs are expressed as mean &#xb1; SD (<italic>n</italic> &#x3d; 3) and plotted using GraphPad&#x2122; Prism 8.0 software.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g003.tif"/>
</fig>
</sec>
<sec id="s3-3">
<title>3.3 3g reduces colony-forming ability of A375 cells</title>
<p>The ability of individual cells to endure, multiply, and form colonies is determined by a colony formation assay used to assess how pharmaceuticals or radiation therapy affect the viability and proliferation of cells (<xref ref-type="bibr" rid="B35">Stone et al., 2016</xref>; <xref ref-type="bibr" rid="B27">Pouget et al., 2022</xref>). The antiproliferative effect of <bold>3g</bold> was examined using colony formation assay. The A375 cells were treated with various concentrations of <bold>3g</bold> (1&#xa0;&#xb5;M, 10&#xa0;&#xb5;M, 20&#xa0;&#xb5;M, 30&#xa0;&#xb5;M) for 48&#xa0;h. It was observed that treatment with <bold>3g</bold> induced the irreversible growth arrest ability and significantly attenuated the size, number of colonies, and colony growth of A375 cells compared to untreated control cells (<xref ref-type="fig" rid="F4">Figure 4</xref>). The percentage of colony growth formation was 100% in untreated control cells wheras it was 37.5% in case of <bold>3g</bold> at 20&#xa0;&#xb5;M in A375 cells.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>
<bold>3g</bold> inhibits colony formation in A375 cells. <bold>(A,B)</bold> Representative images of colony growth inhibition of A375 cells treated with an indicated concentration of <bold>3g</bold> for 48&#xa0;h. Camptothecin (0.1&#xa0;&#xb5;M) was used as a positive control (PC) (<xref ref-type="bibr" rid="B29">Rodr&#xed;guez-Berna et al., 2014</xref>). <bold>(A)</bold> No magnification, <bold>(B)</bold> 20x, Sacle Bar 200&#xa0;&#xb5;m. <bold>(C)</bold> Colonies were quantified using ImageJ software (ver. 1.49&#xa0;V), and graphs were plotted as mean &#xb1; SD (<italic>n</italic> &#x3d; 3) using GraphPad&#x2122; Prism 8.0 software. The statistical significance was determined by comparing the treated samples with an untreated negative control (NC) using One-way ANOVA with Dunnet&#x2019;s multiple comparison test. &#x2a;p &#x3c; 0.001 in comparison to NC.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g004.tif"/>
</fig>
</sec>
<sec id="s3-4">
<title>3.4 3g reduces migration potential of A375 cells</title>
<p>Tumor cell invasion and metastases are significantly influenced by cell migration (<xref ref-type="bibr" rid="B32">Shi et al., 2024</xref>). A fundamental characteristic of a chemotherapeutic agent is its ability to inhibit cell migration and invasion and its capacity to induce targeted cell death in cancerous tissues. Agents for anti-metastatic therapy may include molecules that block the migration of cancer cells (<xref ref-type="bibr" rid="B1">Anderson et al., 2019</xref>). Wound healing assay was performed to analyze the effect of compound <bold>3g</bold> on the wound closure rate and migration potential of cells. The A375 cells were treated with various concentrations of <bold>3g</bold> (30&#xa0;&#xb5;M, 20&#xa0;&#x3bc;M, 10&#xa0;&#xb5;M, and 1&#xa0;&#xb5;M) for 48&#xa0;h. <bold>3g</bold> was found to decrease the migration of A375 cells toward the margin of the wound, resulting in poor closure of the gap and healing of the wound compared to untreated control cells (<xref ref-type="fig" rid="F5">Figure 5</xref>). The percentage of wound closure was 84% in untreated control cells whereas 69% in case of <bold>3g</bold> at 20&#xa0;&#xb5;M in A375 cells (<xref ref-type="fig" rid="F5">Figure 5</xref>).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>
<bold>3g</bold> inhibits the migration of A375 cells into the wound region after 48h treatment with indicated concentrations. <bold>(A)</bold> Representative images from a bright field microscope (4x, Scale bar 1000&#xa0;&#xb5;m) showing inhibition of A375 cell invasion <italic>in vitro</italic> scratch/wound healing assay with indicated concentrations. Camptothecin (0.1&#xa0;&#xb5;M) was used as a positive control (PC). <bold>(B)</bold> The decrease in wound closure or gap filling with an increase in concentration of <bold>3g</bold> was quantified using ImageJ software (ver 1.49&#xa0;V) and plotted as mean &#xb1; SD (<italic>n</italic> &#x3d; 3) using GraphPad&#x2122; Prism 8.0 software. The statistical significance was determined by comparing the treated samples with an untreated negative control (NC) using One-way ANOVA with Dunnet&#x2019;s multiple comparison test. &#x2a;p &#x3c; 0.05, &#x2a;&#x2a;p &#x3c; 0.001 in comparision to NC.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g005.tif"/>
</fig>
<p>Colchicine blocks cell division by disrupting microtubules, and the spindle microtubules are more sensitive to colchicine than the interphase microtubules. It penetrates the cells and equilibrates with the external colchicine rapidly; however, a more extended period is required to attain saturation. Differential sensitivity at different stages of cell division as it binds to microtubules dissociates to tubulin dimers. For instance, colchicine at a concentration of 50&#xa0;nM blocks almost all the prophase, metaphase, and anaphase cells at the mitosis cell cycle. This abnormal mitotic cycle is sometimes called C-mitosis or Colchicine-mitosis (<xref ref-type="bibr" rid="B37">Taylor, 1965</xref>). Moreover, it can inhibit the function of several ion channels and alter the membrane potential of the mitochondria, resulting in the release of proapoptotic factors like caspases, cytochrome-C, and apoptotic features, leading to cell cycle arrest and death (<xref ref-type="bibr" rid="B38">Volbracht et al., 2001</xref>). Microtubule targeting agents (MTA) are also named antimitotic agents that bind to the tubulin in the microtubules and prohibit the proliferation of the cells by inhibiting or destabilizing agents or agents that bind to the colchicine (<xref ref-type="bibr" rid="B14">Jordan and Wilson, 2004</xref>; <xref ref-type="bibr" rid="B3">Arnst, 2018</xref>; <xref ref-type="bibr" rid="B23">Mirzaei et al., 2020</xref>). Tubulin-targeting agents and microtubule-associated proteins as targets have gained much attention since vincristine was approved by the US FDA in 1963 in cancer treatment and anti-cancer drug development (<xref ref-type="bibr" rid="B20">Lu et al., 2012</xref>; <xref ref-type="bibr" rid="B17">Khwaja et al., 2021</xref>). Many colchicine-based derivatives have been synthesized and generated to develop novel and increasing pharmacological profiles to improve their efficacies, toxicity, and therapeutic importance (<xref ref-type="bibr" rid="B39">Zhang et al., 2015</xref>; <xref ref-type="bibr" rid="B21">Majcher et al., 2018</xref>; <xref ref-type="bibr" rid="B28">Pyta et al., 2022</xref>; <xref ref-type="bibr" rid="B13">Iqbal Lone et al., 2024</xref>).</p>
<p>The study found that a derivative of colchicine, identified as <bold>3g</bold>, demonstrated enhanced effectiveness against human melanoma cells. Specifically, <bold>3g</bold> exhibited a selectivity index approximately two times higher than colchicine. We sought to further evaluate the efficacy of <bold>3g</bold> against human melanoma in A375 cells using other <italic>in vitro</italic> assays such as colony formation assay and wound healing assay. We found that <bold>3g</bold> reduced the number and growth of colonies of these cells. The percentage of colony growth formation was 100% in untreated control cells wheras it was 37.5% in case of <bold>3g</bold> at 20&#xa0;&#xb5;M in A375 cells. Moreover, <bold>3g</bold> decreased the migration of A375 cells toward the margin of the wound, resulting in poor wound healing. The percentage of wound closure was 84% in untreated control cells whereas 69% in case of <bold>3g</bold> at 20&#xa0;&#xb5;M in A375 cells. These findings suggest we may have identified a more selective colchicine derivative targeting melanoma cells. This increased selectivity could reduce toxicity to healthy cells, thereby enhancing its therapeutic potential. With its higher selectivity and effectiveness, compound <bold>3g</bold> could present a substantial advantage over colchicine as a treatment for melanoma, potentially resulting in improved outcomes and reduced side effects.</p>
</sec>
<sec id="s3-5">
<title>3.5 Molecular docking</title>
<p>The molecular docking study investigated the binding interactions between colchicine, its derivative, and chain B of the tubulin protein. The docking protocol successfully reproduced the binding pose of the co-crystallized ligand with a low RMSD value of 1.33&#xa0;&#xc5;, demonstrating the accuracy of the docking approach (<xref ref-type="fig" rid="F6">Figure 6</xref>). Additionally, molecular docking of colchicine derivative (binding energy &#x2212;6.498&#xa0;kcal/mol) showed a comparable pose to colchicine (binding energy &#x2212;7.963&#xa0;kcal/mol). The colchicine derivative formed a hydrogen bond with Cys241, Asn258 and a salt bridge with Lys352 (<xref ref-type="fig" rid="F7">Figure 7</xref>). Notably, the interaction with Cys241 is also shown by co-crystalized colchicine in PDB ID 1SA0 (<xref ref-type="fig" rid="F7">Figure 7</xref>). Therefore, these interactions might be important for binding the colchicine derivative with tubulin.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Validation of docking protocol. <bold>(A)</bold> Superimposed pose of colchicine co-crystalized with tubulin (PDB ID: 1SA0) with respect to molecular docking pose; <bold>(B)</bold> 3D pose of colchicine obtained from molecular docking, hydrogen bond is shown as yellow dashed line.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g006.tif"/>
</fig>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Molecular docking studies of colchicine derivative <bold>3g</bold> with the targeted protein. <bold>(A,B)</bold> 2D &#x26; 3D poses of colchicine derivative.</p>
</caption>
<graphic xlink:href="fphar-16-1528235-g007.tif"/>
</fig>
</sec>
<sec id="s3-6">
<title>3.6 Pharmacokinetic properties of compound 3g</title>
<p>The pkCSM results provide a comprehensive overview of the pharmacokinetic and toxicity properties of the compound (<xref ref-type="table" rid="T2">Table 2</xref>). In terms of absorption, the compound exhibits moderate intestinal absorption in humans (75.376%) but has low water solubility (&#x2212;5.195) and poor Caco2 permeability (&#x2212;0.229). The compound is a substrate for P-glycoprotein and acts as an inhibitor for both P-glycoprotein I and II, which may influence its absorption and efflux. The distribution volume (VDss) is low (&#x2212;1.367), and the fraction unbound in plasma is 0.148, indicating significant protein binding. The compound has poor blood-brain barrier (BBB) permeability (&#x2212;2.15) and very low CNS permeability (&#x2212;3.483), suggesting it is unlikely to cross into the central nervous system.</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Pharmacokinetic properties of compound <bold>3g</bold> predicted by pkCSM tool.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="center">S. No.</th>
<th align="center">Property</th>
<th align="center">Model name</th>
<th align="center">Predicted value</th>
<th align="center">Unit</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1.</td>
<td align="left">Absorption</td>
<td align="left">Water solubility</td>
<td align="left">&#x2212;5.195</td>
<td align="left">Numeric (log mol/L)</td>
</tr>
<tr>
<td align="left">2.</td>
<td align="left">Absorption</td>
<td align="left">Caco2 permeability</td>
<td align="left">&#x2212;0.229</td>
<td align="left">Numeric (log Papp in 10<sup>&#x2212;6</sup>&#xa0;cm/s)</td>
</tr>
<tr>
<td align="left">3.</td>
<td align="left">Absorption</td>
<td align="left">Intestinal absorption (human)</td>
<td align="left">75.376</td>
<td align="left">Numeric (% Absorbed)</td>
</tr>
<tr>
<td align="left">4.</td>
<td align="left">Absorption</td>
<td align="left">Skin Permeability</td>
<td align="left">&#x2212;2.768</td>
<td align="left">Numeric (log Kp)</td>
</tr>
<tr>
<td align="left">5.</td>
<td align="left">Absorption</td>
<td align="left">P-glycoprotein substrate</td>
<td align="left">Yes</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">6.</td>
<td align="left">Absorption</td>
<td align="left">P-glycoprotein I inhibitor</td>
<td align="left">Yes</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">7.</td>
<td align="left">Absorption</td>
<td align="left">P-glycoprotein II inhibitor</td>
<td align="left">Yes</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">8.</td>
<td align="left">Distribution</td>
<td align="left">VDss (human)</td>
<td align="left">&#x2212;1.367</td>
<td align="left">Numeric (log L/kg)</td>
</tr>
<tr>
<td align="left">9</td>
<td align="left">Distribution</td>
<td align="left">Fraction unbound (human)</td>
<td align="left">0.148</td>
<td align="left">Numeric (Fu)</td>
</tr>
<tr>
<td align="left">10.</td>
<td align="left">Distribution</td>
<td align="left">BBB permeability</td>
<td align="left">&#x2212;2.15</td>
<td align="left">Numeric (log BB)</td>
</tr>
<tr>
<td align="left">11.</td>
<td align="left">Distribution</td>
<td align="left">CNS permeability</td>
<td align="left">&#x2212;3.483</td>
<td align="left">Numeric (log PS)</td>
</tr>
<tr>
<td align="left">12.</td>
<td align="left">Metabolism</td>
<td align="left">CYP2D6 substrate</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">13.</td>
<td align="left">Metabolism</td>
<td align="left">CYP3A4 substrate</td>
<td align="left">Yes</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">14.</td>
<td align="left">Metabolism</td>
<td align="left">CYP1A2 inhibitior</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">15.</td>
<td align="left">Metabolism</td>
<td align="left">CYP2C19 inhibitior</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">16.</td>
<td align="left">Metabolism</td>
<td align="left">CYP2C9 inhibitior</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">17.</td>
<td align="left">Metabolism</td>
<td align="left">CYP2D6 inhibitior</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">18.</td>
<td align="left">Metabolism</td>
<td align="left">CYP3A4 inhibitior</td>
<td align="left">Yes</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">19.</td>
<td align="left">Excretion</td>
<td align="left">Total Clearance</td>
<td align="left">&#x2212;0.214</td>
<td align="left">Numeric (log mL/min/kg)</td>
</tr>
<tr>
<td align="left">20.</td>
<td align="left">Excretion</td>
<td align="left">Renal OCT2 substrate</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">21.</td>
<td align="left">Toxicity</td>
<td align="left">AMES toxicity</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">22.</td>
<td align="left">Toxicity</td>
<td align="left">Max. tolerated dose (human)</td>
<td align="left">&#x2212;0.139</td>
<td align="left">Numeric (log mg/kg/day)</td>
</tr>
<tr>
<td align="left">23.</td>
<td align="left">Toxicity</td>
<td align="left">hERG I inhibitor</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">24.</td>
<td align="left">Toxicity</td>
<td align="left">hERG II inhibitor</td>
<td align="left">Yes</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">25.</td>
<td align="left">Toxicity</td>
<td align="left">Oral Rat Acute Toxicity (LD50)</td>
<td align="left">2.358</td>
<td align="left">Numeric (mol/kg)</td>
</tr>
<tr>
<td align="left">26.</td>
<td align="left">Toxicity</td>
<td align="left">Oral Rat Chronic Toxicity (LOAEL)</td>
<td align="left">1.285</td>
<td align="left">Numeric (log mg/kg_bw/day)</td>
</tr>
<tr>
<td align="left">27.</td>
<td align="left">Toxicity</td>
<td align="left">Hepatotoxicity</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">28.</td>
<td align="left">Toxicity</td>
<td align="left">Skin Sensitisation</td>
<td align="left">No</td>
<td align="left">Categorical (Yes/No)</td>
</tr>
<tr>
<td align="left">29.</td>
<td align="left">Toxicity</td>
<td align="left">
<italic>T.Pyriformis</italic> toxicity</td>
<td align="left">0.291</td>
<td align="left">Numeric (log ug/L)</td>
</tr>
<tr>
<td align="left">30.</td>
<td align="left">Toxicity</td>
<td align="left">Minnow toxicity</td>
<td align="left">1.622</td>
<td align="left">Numeric (log mM)</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Regarding metabolism, the compound is a substrate for CYP3A4 but not CYP2D6. It inhibits CYP3A4 but does not inhibit other major CYP enzymes, which may reduce the risk of drug-drug interactions. Excretion data indicate low total clearance (&#x2212;0.214), and the compound is not a substrate for renal OCT2, suggesting renal excretion may not be a major elimination pathway. Toxicity profiling shows the compound is non-toxic in AMES tests and non-hepatotoxic. It does not inhibit hERG I but inhibits hERG II. The compound has moderate acute toxicity (LD<sub>50</sub> &#x3d; 2.358) and low chronic toxicity (LOAEL &#x3d; 1.285) in rats. It is non-sensitizing to the skin and shows low toxicity in T. Pyriformis (0.291) and moderate toxicity in minnows (1.622). PredMS predicts the compound to be metabolically stable in human liver micosomes.</p>
</sec>
</sec>
<sec sec-type="conclusion" id="s4">
<title>4 Conclusion</title>
<p>In summary, a series of novel colchicine analogs derivatized at the C-4 position was utilized to obtain <italic>via</italic> multi-component reaction methods and screen for <italic>in vitro</italic> cytotoxicity against human cancer cell lines and normal human embryonic kidney cells (HEK-293) to evaluate for their anti-cancer potency. The MCR method has high utility in drug discovery, especially for structurally optimizing complex natural products for their biological properties (<xref ref-type="bibr" rid="B16">Kaur et al., 2017</xref>). Derivative <bold>3g</bold> reduced cell viability and showed a significantly improved selectivity index against melanoma compared to colchicine. It has a selectivity index of 1.52 with 60% growth inhibition at 20&#xa0;&#xb5;M in melanoma cancer cells with IC<sub>50</sub> of 10.35 &#xb1; 0.56. Additionally, <bold>3g</bold> exhibited significant cytotoxicity against MCF-7 cells with IC<sub>50</sub> of 15.69 &#xb1; 0.39 and a selectivity index of 1.005. Among the tested derivatives, compound <bold>3g</bold> is the most promising candidate, as elucidated by the molecular docking studies, demonstrating significant potential as a colchicine-based anti-cancer agent that can overcome drug resistance and improve efficacy and pharmacokinetic properties for cancer therapy treatment strategies.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s5">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>, further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec sec-type="author-contributions" id="s6">
<title>Author contributions</title>
<p>PK: Formal Analysis, Investigation, Writing &#x2013; original draft. TK: Formal Analysis, Investigation, Methodology, Writing &#x2013; original draft, Writing &#x2013; review &#x26; editing. WL: Investigation, Writing &#x2013; review &#x26; editing. YA: Formal Analysis, Investigation, Writing &#x2013; review &#x26; editing. HT: Software, Visualization, Writing &#x2013; review &#x26; editing. AS: Software, Visualization, Writing &#x2013; review &#x26; editing. ZA: Supervision, Resources, Funding acquisition, Writing &#x2013; review and editing. SR: Conceptualization, Project administration, Supervision, Writing &#x2013; review &#x26; editing. JA: Conceptualization, Funding acquisition, Project administration, Supervision, Writing &#x2013; original draft, Writing &#x2013; review &#x26; editing.</p>
</sec>
<sec sec-type="funding-information" id="s7">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research and/or publication of this article. The authors are grateful for the financial support from the Director, CSIR-IIIM, Jammu. SR acknowledges the financial support from Ramalingaswami Fellowship (Ref. No. BT/RLF/Re-entry/13/2019) received from the Department of Biotechnology, Government of India, and Ministry of Earth Sciences, Grant No. F. No. MoES/PAMC/DOM/55/2023 (E-12933).</p>
</sec>
<ack>
<p>We also acknowledge the technical support from the central instrumentation facility of CSIR-IIIM, Jammu. The institutional manuscript communication number is CSIR-IIIM/IPR/00823.</p>
</ack>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted without any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="ai-statement" id="s9">
<title>Generative AI statement</title>
<p>The author(s) declare that no Generative AI was used in the creation of this manuscript.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec sec-type="supplementary-material" id="s11">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fphar.2025.1528235/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fphar.2025.1528235/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.pdf" id="SM1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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