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<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Pharmacol.</journal-id>
<journal-title>Frontiers in Pharmacology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Pharmacol.</abbrev-journal-title>
<issn pub-type="epub">1663-9812</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-id pub-id-type="publisher-id">1476699</article-id>
<article-id pub-id-type="doi">10.3389/fphar.2024.1476699</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Pharmacology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>New insights into SUMOylation and NEDDylation in fibrosis</article-title>
<alt-title alt-title-type="left-running-head">Han et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fphar.2024.1476699">10.3389/fphar.2024.1476699</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Han</surname>
<given-names>Jin</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Wu</surname>
<given-names>Jun</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/554661/overview"/>
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<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kou</surname>
<given-names>Wen-Tao</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xie</surname>
<given-names>Li-Na</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Tang</surname>
<given-names>Ya-Li</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Zhi</surname>
<given-names>Da-Long</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Li</surname>
<given-names>Ping</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/544143/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/project-administration/"/>
<role content-type="https://credit.niso.org/contributor-roles/supervision/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Chen</surname>
<given-names>Dan-Qian</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/610329/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
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</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Northwest University Chang An Hospital</institution>, <institution>Faculty of Life Sciences and Medicine</institution>, <institution>Northwest University</institution>, <addr-line>Xi&#x2019;an</addr-line>, <addr-line>Shaanxi</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Nephrology</institution>, <institution>Chang An District Hospital</institution>, <addr-line>Xi&#x2019;an</addr-line>, <addr-line>Shaanxi</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>School of Pharmacy</institution>, <institution>Shandong College of Traditional Chinese Medicine</institution>, <addr-line>Yantai</addr-line>, <addr-line>Shandong</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Beijing Key Lab for Immune-Mediated Inflammatory Diseases</institution>, <institution>Institute of Clinical Medical Sciences</institution>, <institution>China-Japan Friendship Hospital</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1899009/overview">Yaying Sun</ext-link>, Shanghai General Hospital, China</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1817658/overview">Xianpeng Liu</ext-link>, Northwestern University, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/757864/overview">Manish Kumar Gupta</ext-link>, University of Central Florida, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Da-Long Zhi, <email>zhidalong@163.com</email>; Ping Li, <email>lp8675@163.com</email>; Dan-Qian Chen, <email>chendanqian2013@163.com</email>
</corresp>
<fn fn-type="equal" id="fn001">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this work</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>04</day>
<month>12</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>15</volume>
<elocation-id>1476699</elocation-id>
<history>
<date date-type="received">
<day>06</day>
<month>08</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>12</day>
<month>11</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 Han, Wu, Kou, Xie, Tang, Zhi, Li and Chen.</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Han, Wu, Kou, Xie, Tang, Zhi, Li and Chen</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Fibrosis is the outcome of any abnormal tissue repair process that results in normal tissue replacement with scar tissue, leading to persistent tissue damage and cellular injury. During the process of fibrosis, many cytokines and chemokines are involved, and their activities are controlled by post-translational modifications, especially SUMOylation and NEDDylation. Both these modifications entail a three-step process of activation, conjugation, and ligation that involves three kinds of enzymes, namely, E1 activating, E2 conjugating, and E3 ligase enzymes. SUMOylation participates in organ fibrosis by modulating FXR, PML, TGF-&#x3b2; receptor I, Sirt3, HIF-1&#x3b1;, and Sirt1, while NEDDylation influences organ fibrosis by regulating cullin3, NIK, SRSF3, and UBE2M. Further investigations exhibit the therapeutic potentials of SUMOylation/NEDDylation activators and inhibitors against organ fibrosis, especially ginkgolic acid in SUMOylation and MLN4924 in NEDDylation. These results demonstrate the therapeutic effects of SUMOylation and NEDDylation against organ fibrosis and highlight their activators as well as inhibitors as potential candidates. In the future, deeper investigations of SUMOylation and NEDDylation are needed to identify novel substrates against organ fibrosis; moreover, clinical investigations are needed to determine the therapeutic effects of their activators and inhibitors that can benefit patients. This review highlights that SUMOylation and NEDDylation function as potential therapeutic targets for organ fibrosis.</p>
</abstract>
<kwd-group>
<kwd>SUMOylation</kwd>
<kwd>NEDDylation</kwd>
<kwd>fibrosis</kwd>
<kwd>ginkgolic acid</kwd>
<kwd>MLN4924</kwd>
</kwd-group>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Inflammation Pharmacology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Fibrosis is the outcome of abnormal tissue repair processes rather than diseases and has been known to cause persistent tissue damage and cellular injury (<xref ref-type="bibr" rid="B2">Antar et al., 2023</xref>; <xref ref-type="bibr" rid="B8">Chen et al., 2018</xref>; <xref ref-type="bibr" rid="B70">Taru et al., 2024</xref>). Fibrotic tissues are characterized by excessive extracellular matrix deposition and activated fibroblasts accompanied by chronic inflammation (<xref ref-type="bibr" rid="B93">Zhang et al., 2021</xref>). Wound healing is effective for repairing injured tissues when the damage is minor or non-repetitive, and only a transient increase in the extracellular matrix and a small amount of activated fibroblasts are observed. However, inflammatory and chronic wound-healing responses are aggravated when the damage is severe, and there is poor elimination of the induced profibrotic factors; in such instances, normal tissue is replaced by scar tissue and often results in organ failure (<xref ref-type="bibr" rid="B30">Henderson et al., 2020</xref>; <xref ref-type="bibr" rid="B94">Zhang et al., 2024b</xref>). The process of fibrosis begins from injury to the epithelial and/or endothelial cells that release proinflammatory chemokines and profibrotic growth factors; then, macrophages and monocytes are recruited in the injured region and release massive amounts of cytokines and chemokines to induce fibroblast activation. The activated fibroblasts migrate to the injured region and transform into myofibroblasts. Excessive extracellular matrix is also accumulated in such instances, and some parenchymal cells are transformed into fibroblasts or myofibroblasts under stimulation by cytokines and chemokines.</p>
<p>During fibrosis formation, many cytokines and chemokines are involved, and their activities are mostly controlled by post-translational modifications (PTMs), including those involving transforming growth factor-&#x3b2; (TGF-&#x3b2;), promyelocytic leukemia (PML), and hypoxia-inducible factor (HIF)-1&#x3b1; (<xref ref-type="bibr" rid="B14">Dai et al., 2020</xref>; <xref ref-type="bibr" rid="B40">Lin et al., 2020</xref>; <xref ref-type="bibr" rid="B52">Peng et al., 2022</xref>). Ubiquitination, phosphorylation, acetylation, and methylation are some of the common PTMs, and numerous studies have confirmed the vital roles of PTMs in fibrosis (<xref ref-type="bibr" rid="B9">Chen et al., 2022</xref>; <xref ref-type="bibr" rid="B38">Liessi et al., 2020</xref>; <xref ref-type="bibr" rid="B45">Liu et al., 2023c</xref>). Notably, some novel PTMs like SUMOylation and NEDDylation are also known to affect fibrosis and have potential as new therapeutic targets against organ fibrosis. Both these modifications entail a three-step process of activation, conjugation, and ligation involving three kinds of enzymes (<xref ref-type="fig" rid="F1">Figure 1</xref>), as will be described in detail in the next section.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Main processes of SUMOylation and NEDDylation, including activation, conjugation, and ligation. <bold>(A)</bold> Main process of SUMOylation. <bold>(B)</bold> Main process of NEDDylation. Both SUMOylation and NEDDylation share these three processes that are mediated by different E1 activating, E2 conjugating, and E3 ligase enzymes. SENPs facilitate deSUMOylation, while NEDP1 controls deNEDDylation. NAE, NEDD8-activating enzyme; NEDP1, Nedd8 protease 1; SAE1, SUMO-activating enzyme subunit 1; SENPS, sentrin-specific proteases; UBA1, ubiquitin-like modifier activating enzyme 1; UBA2, ubiquitin-like modifier activating enzyme 2; UBA3, ubiquitin-like modifier activating enzyme 3; UBA6, ubiquitin-like modifier activating enzyme 6; UBE2M/2F, ubiquitin-conjugating enzyme E2 M/2F; Ubc9, ubiquitin-conjugating enzyme 9.</p>
</caption>
<graphic xlink:href="fphar-15-1476699-g001.tif"/>
</fig>
<p>In this review, we describe some important cellular and molecular mechanisms of SUMOylation and NEDDylation in organ fibrosis reported over the past 5&#xa0;years, from their main regulatory enzymes to the processes themselves as well as introduce the roles of SUMOylation, NEDDylation, and their substrates in organ fibrosis. Then, we present the effects of SUMOylation/NEDDylation activators and inhibitors in organ fibrosis. We also discuss the benefits and limitations of SUMOylation/NEDDylation in the treatment of organ fibrosis with the goal of highlighting their therapeutic potentials and clinical treatment.</p>
</sec>
<sec id="s2">
<title>2 PTMs by ubiquitin-like (Ubl) proteins</title>
<sec id="s2-1">
<title>2.1 Ubiquitination</title>
<p>Ubiquitination is a complex enzymatic cascade in which ubiquitin (Ub) units attach to specific residues of a protein, leading to protein degradation, transcriptional regulation, cell survival, protein&#x2013;protein interactions, and intracellular trafficking. The process of ubiquitination is mediated by three types of enzymes, namely, E1 ubiquitin-activating, E2 ubiquitin-conjugating, and E3 ubiquitin ligase enzymes. First, the free Ub is activated by the E1 ubiquitin-activating enzyme through the participation of ATPs. Ubiquitin conjugates to substrates as a monomer (monoubiquitination) or at multiple sites (multi-monoubiquitination). Then, the activated Ub is transferred from E1 to cysteine at the active site of E2. Finally, the ubiquitinated protein is degraded by the proteasome into amino acids and small peptides or participates in biological processes (<xref ref-type="bibr" rid="B22">Gomarasca et al., 2022</xref>; <xref ref-type="bibr" rid="B51">Pellegrino et al., 2022</xref>). In this process, depending on E3, ubiquitin is transferred to the substrate via two mechanisms. The really interesting new gene (RING) E3 directly transfers ubiquitin to the substrate, while the homologous to E6AP carboxyl terminus (HECT) E3 or RING-between RING-RING (RBR) E3 transfers ubiquitin to itself and then to the substrate (<xref ref-type="bibr" rid="B19">French et al., 2021</xref>). The glycine residue of Ub covalently links to the lysine of the substrate, and Ub also forms Ub chains in this manner. Ub has seven lysine residues, namely, Lys6, Lys11, Lys27, Lys29, Lys33, Lys48, and Lys63. Among these, Lys48-linked polyubiquitin chains are responsible for protein degradation, while Lys29-linked polyubiquitin chains control lysosomal degradation (<xref ref-type="bibr" rid="B19">French et al., 2021</xref>). Notably, ubiquitination is a reversible process that is mediated by deubiquitinating enzymes (DUBs) (<xref ref-type="bibr" rid="B43">Liu et al., 2023b</xref>). DUBs remove ubiquitin from substrates or ubiquitin chains by reversing the function of the E3 ligase enzyme.</p>
</sec>
<sec id="s2-2">
<title>2.2 SUMOylation</title>
<p>SUMOylation is an important and reversible PTM similar to ubiquitination; it participates in nuclear&#x2013;cytoplasmic transfer, genomic integrity, translational regulation, and cell-cycle regulation (<xref ref-type="bibr" rid="B55">Qi et al., 2024</xref>; <xref ref-type="bibr" rid="B68">Sun et al., 2024</xref>). Small ubiquitin-like modifier (SUMO) proteins are the most well-known Ubls that share a similar three-dimensional structure with Ub. Five SUMO proteins (SUMO1&#x2013;5) are expressed in mammals, where SUMO2 and SUMO3 are highly similar so as to be called SUMO2/3 (<xref ref-type="bibr" rid="B74">Wang and Matunis, 2023b</xref>). SUMO1&#x2013;3 are widely expressed in tissues, while SUMO4 is mainly expressed in the spleen and kidneys and SUMO5 is mainly expressed in the blood and testes (<xref ref-type="bibr" rid="B22">Gomarasca et al., 2022</xref>). Similar to ubiquitination, SUMOylation relies on three classes of enzymes.</p>
<p>Before SUMOylation, the SUMO proteins are matured by removing several amino acids using the sentrin-specific protease (SENP) family of proteases. First, the E1 activating enzyme is a heterodimer comprising two SUMO-activating enzyme subunits (SAE1 and SAE2) that activates the SUMO protein at the C-terminal glycine residue to form a thioester bond with SAE2 at the cysteine residue. Then, SUMO is transferred to the only E2 enzyme, ubiquitin-conjugating enzyme 9 (Ubc9), through the formation of a thioester bond during SUMOylation (<xref ref-type="bibr" rid="B104">Zhu et al., 2024</xref>). Finally, SUMO is transferred to the substrate at the lysine residue to form a thioester bridge with the glycine residue at the C-terminus of SUMO (<xref ref-type="bibr" rid="B80">Wu and Huang, 2023</xref>) (<xref ref-type="fig" rid="F2">Figure 2</xref>). Notably, a specific SUMO consensus motif &#x3a8;KXE is identified, where &#x3a8; is a hydrophobic residue while K and E are the respective lysine acceptor and glutamic acid residues, and X is an amino acid. SUMOylation also includes a reversible process called deSUMOylation, in which a SUMO modification is cleaved from a substrate by the SENP family (<xref ref-type="bibr" rid="B50">Pei et al., 2024</xref>). The SENP family also mediates SUMO maturation (<xref ref-type="bibr" rid="B7">Brand et al., 2022</xref>; <xref ref-type="bibr" rid="B10">Chen et al., 2024a</xref>; <xref ref-type="bibr" rid="B78">Wen et al., 2024</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>SUMOylation pathway in fibrosis. Increased levels of SUMO1, SUMO2, and Ubc9 as well as decreased level of SAE1 are observed in fibrosis. SUMOylation of PML, TGF&#x3b2;RI, Smad4, Twist2, FXR, Sirt3, STAT1, HIF-1&#x3b1;, and CFTR contribute to fibrosis, whereas SUMOylation of LXR&#x3b1;, NR5A2, SNIP1, Beclin1, and Vps34 can inhibit fibrosis. Notably, SUMOylated PML has been reported to participate in several organ fibrosis and functions as a promising therapeutic target for fibrosis treatment. CFTR, cystic fibrosis transmembrane conductance regulator; FXR, farnesoid X receptor; HIF-1&#x3b1;, hypoxia-inducible factor-1&#x3b1;; LXR&#x3b1;, liver X receptor &#x3b1;; NR5A2, nuclear receptor subfamily 5 group A member 2; PML, promyelocytic leukemia; SAE1, SUMO-activating enzyme subunit 1; SNIP1, Smad nuclear-interacting protein 1; TGF&#x3b2;RI, transforming growth factor-&#x3b2; receptor I; Ubc9, ubiquitin-conjugating enzyme 9.</p>
</caption>
<graphic xlink:href="fphar-15-1476699-g002.tif"/>
</fig>
</sec>
<sec id="s2-3">
<title>2.3 NEDDylation</title>
<p>NEDDylation is a type of PTM characterized by the covalent conjugation of neural-precursor-cell-expressed developmentally downregulated 8 (NEDD8) to a lysine residue in the substrate. NEDDylation plays important roles in metabolism, cell proliferation, signal transduction, DNA repair, and stress responses (<xref ref-type="bibr" rid="B25">Gonzalez-Rellan et al., 2023</xref>; <xref ref-type="bibr" rid="B29">He et al., 2023</xref>; <xref ref-type="bibr" rid="B46">Lu et al., 2023</xref>). NEDD8 is one of the Ubls sharing 80% homology with Ub. NEDDylation involves three enzymatic cascades with NEDD8-activating enzyme (NAE) E1, NEDD8-conjugating enzyme E2 (or ubiquitin-conjugating enzyme E2 M, UBE2M), and substrate-specific NEDD8-E3 ligase.</p>
<p>Before NEDDylation, the maturation of NEDD8 includes exposure to Gly76 through removal of the C-terminal amino acids from the NEDD8 precursor with a hydrolase such as UCHL3 or DEN1. First, a thioester bond is formed between NEDD8 and the UBA3 subunit of the E1 activating enzyme NAE along with participation of ATPs. Then, NEDD8 is transferred to an E2 conjugating enzyme by a trans-thiolation reaction. Lastly, a substrate-specific E3 ligase contributes to the bond between NEDD8 and the substrate through promotion of the bond between the E2 enzyme and substrate (<xref ref-type="fig" rid="F3">Figure 3</xref>). The most identified NEDDylation substrates are cullins, which are subunits of the cullin-RING E3 ubiquitin ligases (CRLs) (<xref ref-type="bibr" rid="B49">Olaizola et al., 2022</xref>; <xref ref-type="bibr" rid="B89">Yu et al., 2022a</xref>). Notably, CRLs are common E3 ubiquitin ligases whose activities are facilitated by NEDDylation (<xref ref-type="bibr" rid="B5">Boh et al., 2011</xref>; <xref ref-type="bibr" rid="B29">He et al., 2023</xref>). In addition, PTEN, p53, and phosphoenolpyruvate carboxykinase 1 (PCK1) are substrates of NEDD8 (<xref ref-type="bibr" rid="B25">Gonzalez-Rellan et al., 2023</xref>; <xref ref-type="bibr" rid="B42">Liu et al., 2023a</xref>; <xref ref-type="bibr" rid="B83">Xie et al., 2021</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>NEDDylation pathway in fibrosis. Increased levels of NEDD8 and UBE2M as well as decreased UBE2M are observed in fibrosis. NEDDylation of cullin3 contributes to fibrosis, while NEDDylation of NIK and SRSF3 can block fibrosis. Notably, NEDDylated PML has been reported to participate in organ fibrosis and functions as a promising therapeutic target for fibrosis treatment. NAE, NEDD8-activating enzyme; NIK, NF-&#x3ba;B-inducing kinase; SRSF3, serine-rich splicing factor 3; UBE2M, ubiquitin-conjugating enzyme E2 M.</p>
</caption>
<graphic xlink:href="fphar-15-1476699-g003.tif"/>
</fig>
<p>DeNEDDylation involves removal of NEDD8 from a substrate by a NEDD8 isopeptidase (<xref ref-type="bibr" rid="B84">Xiong et al., 2020</xref>). Nedd8 protease 1 (NEDP1) is a common NEDD8 isopeptidase that has two kinds of activities; NEDP1 belongs to a small ubiquitin-like-modifier-specific protease family that matures NEDD8 by exposure to the Gly76 residue and removal of the covalent binding between NEDD8 and the substrate (<xref ref-type="bibr" rid="B4">Bailly et al., 2019</xref>; <xref ref-type="bibr" rid="B51">Pellegrino et al., 2022</xref>).</p>
</sec>
</sec>
<sec id="s3">
<title>3 Roles of SUMOylation and NEDDylation in fibrosis</title>
<sec id="s3-1">
<title>3.1 Role of SUMOylation in fibrosis</title>
<p>Emerging evidence has revealed the important roles of SUMOylation and deSUMOylation in fibrosis; herein, we describe only a few of the important findings concerning different types of organ fibrosis for the sake of brevity. In the liver, the human PML protein is a key organizer of nuclear bodies that participates in fibrosis. Silencing Ubc9, the only known E2-conjugating enzyme in SUMOylation, alleviates hepatic stellate cell activation, while silencing RNF4, an E3 ubiquitin ligase family member, facilitates the TGF-&#x3b2;/Smad pathway and causes liver fibrosis by enhancing SUMOylated PML accumulation (<xref ref-type="bibr" rid="B14">Dai et al., 2020</xref>; <xref ref-type="bibr" rid="B34">Li et al., 2024a</xref>). The TGF-&#x3b2; pathway is essential in fibrogenesis, and SUMOylation has been proven as an important target of the TGF-&#x3b2; pathway to treat fibrosis (<xref ref-type="bibr" rid="B71">Ungefroren, 2019</xref>). SUMOylation of the TGF-&#x3b2; receptor I occurs at the Lys385 and Lys389 residues, while SUMOylation of Smad4 occurs at Lys113 in the MH1 domain and Lys159 in the linker segment (<xref ref-type="bibr" rid="B75">Wang et al., 2021</xref>). Moreover, SAE1 is a promising therapeutic target for suppressing ferroptosis against liver fibrosis by reducing SUMOylation (<xref ref-type="bibr" rid="B92">Zhang et al., 2024a</xref>). SUMOylation of the farnesoid X receptor (FXR) occurs at the Lys122, Lys275, and Glu277 residues, and inhibited SUMOylation of FXR promotes its transactivity and suppresses hepatic stellate cell activation against liver fibrosis (<xref ref-type="bibr" rid="B99">Zhou et al., 2020b</xref>). The orphan nuclear receptor small heterodimer partner (SHP) alleviates chronic hepatitis C virus (HCV)-induced hepatic fibrosis; SHP regulates gluconeogenesis through Forkhead box O1 acetylation via histone deacetylase 9 (HDAC9) and controls lipogenesis by upregulating the sterol regulatory element binding protein 1c via SUMOylation of the liver X receptor &#x3b1; (<xref ref-type="bibr" rid="B11">Chen et al., 2019</xref>). These findings confirm the regulatory effects of SUMOylation in liver fibrosis.</p>
<p>SUMOylation also has notable roles in pulmonary diseases, including hypoxic pulmonary hypertension, idiopathic pulmonary fibrosis, and chronic obstructive pulmonary disease (<xref ref-type="bibr" rid="B97">Zheng et al., 2023</xref>) (<xref ref-type="table" rid="T1">Table 1</xref>). Upregulation of SUMO1 and Ubc9 has been observed in human bronchial epithelial cells after exposure to cigarette smoke extract in chronic obstructive pulmonary disease (<xref ref-type="bibr" rid="B98">Zhou et al., 2020a</xref>), and upregulation of SUMO1, SUMO2, and Ubc9 has been noted in the lung tissues of patients with idiopathic pulmonary fibrosis (<xref ref-type="bibr" rid="B90">Yu et al., 2022b</xref>). Inhibition of SUMO1 blocks idiopathic pulmonary fibrosis (<xref ref-type="bibr" rid="B90">Yu et al., 2022b</xref>), highlighting that SUMOylation has an important role in pulmonary fibrosis.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Profibrotic and antifibrotic effects of SUMOylation and NEDDylation substrates as well as their target organs, related diseases, and biochemical functions.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Target organ</th>
<th align="left">Related disease</th>
<th align="left">Substrates/related proteins</th>
<th align="left">Biological functions</th>
<th align="left">References</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td colspan="5" align="center">SUMOylation</td>
</tr>
<tr>
<td rowspan="7" align="left">Liver</td>
<td align="left">Arsenic-trioxide-induced liver fibrosis</td>
<td align="left">PML</td>
<td align="left">Facilitating TGF-&#x3b2;/Smad pathway and accumulating liver fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B14">Dai et al. (2020),</xref> <xref ref-type="bibr" rid="B34">Li et al. (2024a)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">&#x2014;</td>
<td align="left">TGF-&#x3b2; receptor I at Lys385 and Lys389</td>
<td align="left">Regulating the generation of myofibroblasts and EMTs</td>
<td align="left">
<xref ref-type="bibr" rid="B75">Wang et al. (2021)</xref>
</td>
</tr>
<tr>
<td align="left">Smad4 at Lys 113 and Lys159</td>
<td align="left">Regulating the generation of myofibroblasts and EMTs</td>
<td align="left">
<xref ref-type="bibr" rid="B75">Wang et al. (2021)</xref>
</td>
</tr>
<tr>
<td align="left">Non-alcoholic steatohepatitis (NASH)</td>
<td align="left">FXR at Lys122, Lys275 and Glu277</td>
<td align="left">Suppressing FXR transactivity and hepatic stellate cell activation</td>
<td align="left">
<xref ref-type="bibr" rid="B99">Zhou et al. (2020b)</xref>
</td>
</tr>
<tr>
<td align="left">Thioacetamide-induced liver fibrosis</td>
<td align="left">SAE1 downregulation</td>
<td align="left">Antifibrotic effect</td>
<td align="left">
<xref ref-type="bibr" rid="B92">Zhang et al. (2024a)</xref>
</td>
</tr>
<tr>
<td align="left">Chronic hepatitis C virus-induced liver fibrosis</td>
<td align="left">Liver X receptor &#x3b1;</td>
<td align="left">Regulating lipogenesis and alleviating liver fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B11">Chen et al. (2019)</xref>
</td>
</tr>
<tr>
<td align="left">Chronic obstructive pulmonary disease</td>
<td align="left">SUMO1 and Ubc9 upregulation</td>
<td align="left">Profibrotic effect</td>
<td align="left">
<xref ref-type="bibr" rid="B98">Zhou et al. (2020a)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Lung</td>
<td align="left">Idiopathic pulmonary fibrosis</td>
<td align="left">SUMO1, SUMO2, and Ubc9 upregulation</td>
<td align="left">Profibrotic effect</td>
<td align="left">
<xref ref-type="bibr" rid="B90">Yu et al. (2022b)</xref>
</td>
</tr>
<tr>
<td align="left">Unilateral ureteric obstruction</td>
<td align="left">NR5A2 at Lys224</td>
<td align="left">Upregulating calreticulin to drive fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B3">Arvaniti et al. (2016),</xref> <xref ref-type="bibr" rid="B54">Politis and Charonis (2022)</xref>
</td>
</tr>
<tr>
<td rowspan="4" align="left">Kidney</td>
<td align="left">Folic acid and ischemia&#x2013;reperfusion-induced acute kidney injury</td>
<td align="left">Sirt3</td>
<td align="left">Suppressing fibroblast-induced repair and promoting fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B103">Zhu et al. (2023)</xref>
</td>
</tr>
<tr>
<td align="left">Unilateral ureteric obstruction</td>
<td align="left">HIF-1&#x3b1;</td>
<td align="left">Regulating TGF-&#x3b2;/Smad and NF-&#x3ba;B pathways</td>
<td align="left">
<xref ref-type="bibr" rid="B35">Li et al. (2019),</xref> <xref ref-type="bibr" rid="B87">Yang et al. (2019)</xref>
</td>
</tr>
<tr>
<td align="left">Diabetic kidney disease</td>
<td align="left">STAT1</td>
<td align="left">Suppressing STAT1 activity and accelerating EMTs</td>
<td align="left">
<xref ref-type="bibr" rid="B26">Gu et al. (2023a)</xref>
</td>
</tr>
<tr>
<td align="left">Transverse-aortic-constriction-induced cardiac fibrosis</td>
<td align="left">PML</td>
<td align="left">Facilitating PML nuclear body formation and further transforming Pin1 into nuclear to interact with PML, thus promoting fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B79">Wu et al. (2019)</xref>
</td>
</tr>
<tr>
<td rowspan="6" align="left">Heart</td>
<td rowspan="2" align="left">Myocardial infarction</td>
<td rowspan="2" align="left">PML</td>
<td align="left">Controlling p53 expression to facilitate PML-nuclear-body formation and regulating fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B31">Huang et al. (2023)</xref>
</td>
</tr>
<tr>
<td align="left">Promoting p53 recruitment and activation to exacerbate cardiac fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Qiu et al. (2020)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Myocardial ischemic injury</td>
<td align="left">Ubc9</td>
<td align="left">Inhibiting apoptosis under oxygen and glucose deprivation against fibrosis</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B82">Xiao et al. (2020)</xref>
</td>
</tr>
<tr>
<td align="left">Vps34 and Beclin1</td>
<td align="left">Facilitating the protein assembly of PI3K-III complexes I and II to inhibit fibrosis</td>
</tr>
<tr>
<td align="left">Transaortic constriction</td>
<td align="left">Sirt1</td>
<td align="left">Blocking the transformation of cardiac fibroblasts into myofibroblasts to delay fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B47">Luo et al. (2022)</xref>
</td>
</tr>
<tr>
<td align="left">Transverse aortic constriction</td>
<td align="left">SUMO2</td>
<td align="left">Dual regulation of SUMO2 and STAT1 to affect fibrosis, hypertrophy, and inflammation</td>
<td align="left">
<xref ref-type="bibr" rid="B58">Rangrez et al. (2020)</xref>
</td>
</tr>
<tr>
<td align="left">CFBE41o- airway cells</td>
<td align="left">Cystic fibrosis</td>
<td align="left">CFTR</td>
<td align="left">Modulating biogenesis and degradation</td>
<td align="left">
<xref ref-type="bibr" rid="B23">Gong et al. (2019)</xref>
</td>
</tr>
<tr>
<td align="left">Intestine</td>
<td align="left">Crohn&#x2019;s disease</td>
<td align="left">SNIP1</td>
<td align="left">Inhibiting EMTs and intestinal fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B13">Chen et al. (2024c)</xref>
</td>
</tr>
<tr>
<td align="left">MCF10A cell</td>
<td align="left">&#x2014;</td>
<td align="left">Twist2 at Lys129</td>
<td align="left">Accelerating EMTs and promoting mesenchymal phenotypes</td>
<td align="left">
<xref ref-type="bibr" rid="B91">Zeng et al. (2021)</xref>
</td>
</tr>
<tr>
<td colspan="5" align="center">NEDDylation</td>
</tr>
<tr>
<td rowspan="6" align="left">Liver</td>
<td align="left">CCl<sub>4</sub>-induced liver fibrosis</td>
<td align="left">Global NEDDylation</td>
<td align="left">Promoting the kinase activity of Eph receptor tyrosine kinase EphB1 to trigger fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B36">Li et al. (2023)</xref>
</td>
</tr>
<tr>
<td align="left">Bile-duct ligation and CCl<sub>4</sub>-induced liver fibrosis</td>
<td align="left">Global NEDDylation</td>
<td align="left">Promoting chemokine (C-X-C motif) ligand 1 and CCL2 expressions to promote apoptosis and fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B106">Zubiete-Franco et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">NAFLD</td>
<td align="left">NEDD8</td>
<td align="left">Ameliorating liver fibrosis, lipid peroxidation, lipid accumulation, and inflammation</td>
<td align="left">
<xref ref-type="bibr" rid="B64">Serrano-Maci&#xe1; et al. (2021)</xref>
</td>
</tr>
<tr>
<td align="left">NASH</td>
<td align="left">Cullin 3</td>
<td align="left">Driving Nrf2 dysfunction and AGER1 downregulation to promote fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B15">Dehnad et al. (2020)</xref>
</td>
</tr>
<tr>
<td align="left">Acute liver failure</td>
<td align="left">NIK</td>
<td align="left">Suppressing abnormal NIK activation, aggressive hepatocyte damage, fibrosis, and inflammation</td>
<td align="left">
<xref ref-type="bibr" rid="B85">Xu et al. (2022)</xref>
</td>
</tr>
<tr>
<td align="left">NAFLD and NASH</td>
<td align="left">SRSF3 at Lys11</td>
<td align="left">Promoting SRSF3 degradation and alterations in RNA splicing to alleviate hepatic steatosis, fibrosis, and inflammation</td>
<td align="left">
<xref ref-type="bibr" rid="B32">Kumar et al. (2019)</xref>
</td>
</tr>
<tr>
<td align="left">Pancreas</td>
<td align="left">Chronic pancreatitis</td>
<td align="left">UBE2M</td>
<td align="left">Suppressing CCL5 and CD163 expression to drive fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B41">Lin et al. (2021)</xref>
</td>
</tr>
<tr>
<td align="left">Lung</td>
<td align="left">Cystic fibrosis</td>
<td align="left">NEDD8</td>
<td align="left">Promoting &#x394;F508-CFTR-induced cystic fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B57">Ramachandran et al. (2016)</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>In renal fibrosis, the nuclear receptor subfamily 5 group A member 2 (NR5A2) and Ubc9 are highly expressed in the kidney, while the K224R mutation of SUMOylated NR5A2 fails to upregulate calreticulin to drive fibrosis (<xref ref-type="bibr" rid="B3">Arvaniti et al., 2016</xref>; <xref ref-type="bibr" rid="B54">Politis and Charonis, 2022</xref>). DeSUMOylation of Sirt3 by SENP1 was found to control macrophage polarization and metabolic stress (<xref ref-type="bibr" rid="B73">Wang et al., 2019</xref>; <xref ref-type="bibr" rid="B101">Zhou et al., 2022b</xref>). The covalent binding of SUMO1 and Sirt3 increases during acute kidney injury (AKI), and the mutation of lysine to arginine significantly attenuates AKI while minimizing fibroblast-induced repair in a genetically modified mouse model (<xref ref-type="bibr" rid="B103">Zhu et al., 2023</xref>). Additionally, renal fibrosis is mainly involved in HIF-1&#x3b1; SUMOylation and SUMO-mediated regulation of the TGF-&#x3b2;/Smad and NF-&#x3ba;B pathways (<xref ref-type="bibr" rid="B35">Li et al., 2019</xref>; <xref ref-type="bibr" rid="B87">Yang et al., 2019</xref>). STAT1 activation delays epithelial&#x2013;mesenchymal transitions (EMTs) after high glucose stimulation in the renal tubular epithelial cells, while high glucose levels promote STAT1 SUMOylation to suppress STAT1 activity and accelerate EMT (<xref ref-type="bibr" rid="B26">Gu et al., 2023a</xref>). These findings prove that SUMOylation may be a potential therapeutic target against renal fibrosis.</p>
<p>In cardiac fibrosis, obvious TGF-&#x3b2;1, prolyl isomerase NIMA-interacting 1 (Pin1) upregulation, and increased PML SUMOylation have been observed. TGF-&#x3b2;1 stimulation facilitates PML SUMOylation, nuclear body formation, and transformation of Pin1 into the nuclear body to interact with PML (<xref ref-type="bibr" rid="B79">Wu et al., 2019</xref>). Another study showed that SUMOylated PML has the ability to control p53 expression as p53 is vital for PML nuclear body formation in cardiac fibroblasts (<xref ref-type="bibr" rid="B31">Huang et al., 2023</xref>). The knockout of a poly-SUMO-specific E3 ubiquitin ligase RNF4 has been shown to aggravate interstitial fibrosis and cardiac dysfunction in the animal model of myocardial infarction. RNF4 knockout and PML overexpression facilitate PML SUMOylation as well as p53 recruitment and activation to exacerbate cardiomyocyte apoptosis. The interactions among RNF4, PML, and p53 could be potential therapeutic targets against cardiac fibrosis and apoptosis in myocardial infarction (<xref ref-type="bibr" rid="B56">Qiu et al., 2020</xref>). PML overexpression and RNF4 knockdown by small interfering RNA (siRNA) enhance PML SUMOylation, promote p53 recruitment and activation, and exacerbate H<sub>2</sub>O<sub>2</sub>/ATO-induced cardiomyocyte apoptosis, which could be partially reversed by knockdown of p53. Ubc9 has been proven to be a novel therapeutic target for protecting cardiomyocytes from ischemic stress while obviously alleviating cardiomyocyte apoptosis, fibrosis, and improving cardiac function. Ubc9 overexpression attenuates cardiomyocyte apoptosis, while Ubc9 knockout aggravates apoptosis under oxygen and glucose deprivation. A mechanical study showed that Ubc9 promotes SUMOylation of Vps34 and Beclin1, which are two core proteins in the class III phosphatidylinositol 3-kinase (PI3K-III) complex, and facilitates the protein assembly of the PI3K-III complexes I and II (<xref ref-type="bibr" rid="B82">Xiao et al., 2020</xref>). Sirt1 SUMOylation blocks the transformation of cardiac fibroblasts into myofibroblasts by suppressing fibrogenesis via the AKT/GSK3&#x3b2; pathway (<xref ref-type="bibr" rid="B47">Luo et al., 2022</xref>). The HECT domain containing E3 ubiquitin protein ligase 3 (HectD3) ameliorates pathological hypertrophy, macrophage infiltration, and cardiac fibrosis induced by pressure overload; HectD3 exhibits dual regulation of SUMO2 and STAT1 against hypertrophic and inflammatory effects in cardiomyocytes (<xref ref-type="bibr" rid="B58">Rangrez et al., 2020</xref>). These results indicate that SUMOylation is an important tool for treating cardiac fibrosis.</p>
<p>SUMOylation of the cystic fibrosis transmembrane conductance regulator (CFTR) involves its degradation and is a potential therapeutic target in the treatment of cystic fibrosis. Mechanically, the E3 ligase enzyme, which is the protein inhibitor of activated STAT 4 (PIAS4), mediates covalent binding of CFTR to SUMO1 but suppresses such binding to SUMO2/3 (<xref ref-type="bibr" rid="B23">Gong et al., 2019</xref>). Other studies have shown that inhibition of SUMOylation can attenuate cystic fibrosis via CFTR (<xref ref-type="bibr" rid="B6">Borgo et al., 2024</xref>; <xref ref-type="bibr" rid="B53">Peters et al., 2021</xref>), confirming that CFTR is a vital therapeutic target against cystic fibrosis. The long non-coding RNA MSC-AS1 is highly expressed in EMT and intestinal fibrosis through modulation of the Smad nuclear-interacting protein 1 (SNIP1); MSC-AS1 also directly interacts with SENP1 to deSUMOylate and inactivate SNIP1 (<xref ref-type="bibr" rid="B13">Chen et al., 2024c</xref>).</p>
<p>Emerging evidence also shows the vital role of SUMOylation in fibrogenesis <italic>in vitro</italic>. Twist2 is a key transcription factor in EMT that contributes to fibrosis. The SUMO2/3-specific E3 ligase zinc finger protein 451 (ZNF451) has been identified as a regulator of Twist2 to maintain its stability. Mechanistic studies show that a direct bond between ZNF451 and Twist2 results in Twist2 SUMOylation at the Lys129 residue and hinders the Ub-dependent degradation of Twist2. Ectopic expression of ZNF451 promotes Twist2 expression and EMT, whereas knockout of ZNF451 inhibits the mesenchymal phenotypes. ZNF functions as a novel mediator in fibrosis by facilitating Twist2 SUMOylation (<xref ref-type="bibr" rid="B91">Zeng et al., 2021</xref>). The RAN GTPase-activating protein 1 (RanGAP1) has been identified as a functional partner of SUMOs in fibrogenesis. Mechanically, the RanGAP1-SUMO1 complex mediates nuclear Smad4 accumulation by dissociating Smad4 and CRM1 (<xref ref-type="bibr" rid="B39">Lin et al., 2023</xref>). SUMOylation triggers modulation of aldosterone-activated mineralocorticoid receptor transactivation to regulate fibrosis (<xref ref-type="bibr" rid="B20">Gadasheva et al., 2021</xref>). The SUMO1-RanGAP1 complex has been proven to be a key molecule for amplification of the TGF-&#x3b2;/Smad and HIF-1 pathways. During fibrogenesis, SUMOylation is activated so that HIF-1&#x3b1; is SUMOylated by SUMO1 at Lys391 and Lys477 (<xref ref-type="bibr" rid="B40">Lin et al., 2020</xref>).</p>
</sec>
<sec id="s3-2">
<title>3.2 Role of NEDDylation in fibrosis</title>
<p>NEDDylation has been proven to be an important regulator of liver fibrosis (<xref ref-type="table" rid="T1">Table 1</xref>). Hepatic NEDDylation dysfunction causes oxidative stress, inflammation, fibrosis, hepatocyte reprogramming, and liver injury in acute and chronic liver diseases. NEDDylation can be considered a novel therapeutic target against liver fibrosis, and MLN4924 as an inhibitor of NAE shows promising potential in the treatment of liver fibrosis (<xref ref-type="bibr" rid="B85">Xu et al., 2022</xref>; <xref ref-type="bibr" rid="B88">Yao et al., 2020</xref>). The upregulation of EphB1 is accompanied by increased NEDDylation in activated hepatic stellate cells. This enhanced NEDDylation promotes the kinase activity of the Eph receptor tyrosine kinase EphB1 by preventing its degradation to facilitate proliferation and migration of the hepatic stellate cells. These results indicate that EphB1 could be a promising therapeutic target of liver fibrosis (<xref ref-type="bibr" rid="B36">Li et al., 2023</xref>). In liver fibrosis, enhanced NEDDylation is positively related to increased caspase 3 activity to induce hepatic stellate cell apoptosis, whereas inhibited NEDDylation reduces chemokine (C-X-C motif) ligand 1 and C-C motif chemokine ligand 2 (CCL2) expressions to ameliorate apoptosis. Chemokine receptors and cytokines are increased in activated macrophages but decreased in the mouse Kupffer cells after NEDDylation inhibition. These findings indicate that enhanced NEDDylation contributes to liver fibrosis and that NEDDylation may be a promising therapeutic target for treating liver fibrosis (<xref ref-type="bibr" rid="B106">Zubiete-Franco et al., 2017</xref>). In the progression of non-alcoholic fatty liver disease (NAFLD) and liver fibrosis, the serum NEDD8 levels are closely related to hepatic NEDDylation. Inhibition of NEDDylation through NEDD8 suppression was shown to ameliorate liver fibrosis, lipid peroxidation, lipid accumulation, and inflammation in the NAFLD mouse model. Deptor is upregulated in NAFLD and liver fibrosis accompanied by suppressed mTOR signaling, increased fatty acid oxidation, and decreased lipid content while its silencing counteracts the antisteatotic effects of NEDDylation inhibition. These results indicate the important roles of Deptor in NEDDylation-inhibition-treated NAFLD and liver fibrosis (<xref ref-type="bibr" rid="B64">Serrano-Maci&#xe1; et al., 2021</xref>). NEDDylation of cullin3 is involved in Nrf2 dysfunction and advanced glycation end product receptor 1 (AGER1) downregulation in liver fibrosis. Overexpression of Nrf2 in the hepatocytes blocks AGER1 decrease and reduces the advanced glycation end-product levels, in addition to suppressing inflammation and fibrosis in the mouse model of non-alcoholic steatohepatitis (NASH) (<xref ref-type="bibr" rid="B15">Dehnad et al., 2020</xref>). Dysregulation of NAE1, a regulatory subunit of NAE E1, has been observed in human acute liver failure; loss of NAE in the hepatocytes results in hepatocyte death, inflammation, fibrosis, and eventually liver dysfunction in the mouse model. Notably, NF-&#x3ba;B-inducing kinase (NIK) NEDDylation facilitates its ubiquitination and degradation, whereas inhibition of NIK NEDDylation leads to abnormal NIK activation, aggressive hepatocyte damage, and inflammation in adult male mice with acute liver failure (<xref ref-type="bibr" rid="B85">Xu et al., 2022</xref>). Serine-rich splicing factor 3 (SRSF3) modulates liver function, and the loss of SRSF3 deteriorates liver fibrosis and injury. SRSF3 is reduced in human liver samples with NAFLD and NASH along with alterations in the RNA splicing of known SRSF3 target genes. The conjugation of NEDD8 protein with SRSF3 and subsequent proteasome-mediated degradation are induced by palmitic acid. The NEDDylation of SRSF3 occurs at Lys11, and the mutation of SRSF3 (SRSF3-K11R) prevents its degradation and alteration in RNA splicing, which alleviates hepatic steatosis, fibrosis, and inflammation (<xref ref-type="bibr" rid="B32">Kumar et al., 2019</xref>).</p>
<p>NEDDylation is involved in fibrogenesis in the lungs, the kidneys, chronic pancreatitis, and cystic fibrosis (<xref ref-type="table" rid="T1">Table 1</xref>). In pulmonary fibrosis, the cullin-associated and NEDDylation-dissociated 1 (CAND1) level is negatively related to cullin1 NEDDylation in EMT, while the interaction between CAND1 and cullin1 enables the Skp-cullin-F-box protein (SCF) ubiquitin ligase system to boost protein ubiquitination (<xref ref-type="bibr" rid="B102">Zhou et al., 2022c</xref>). Familial hyperkalemic hypertension is a monogenic disease caused by mutations in the genes encoding WNK kinases, ubiquitin scaffold protein cullin3, or substrate adapter kelch-like 3 (KLHL3). Compared with wild-type (WT) cullin3, mutant cullin3 &#x394;403-459 retains the ability to bind and ubiquitylate WNK kinases and KLHL3 while being more NEDDylated and activated. The activated cullin3 &#x394;403-459 exhausts KLHL3 and prevents WNK degradation, while the loss of cullin3 aggravates FHHt and accelerates renal fibrosis in the murine model (<xref ref-type="bibr" rid="B48">McCormick et al., 2014</xref>). Chronic pancreatitis is characterized by irreversible fibrotic and inflammatory disease. Compared with normal healthy controls, UBE2M is remarkably decreased in human chronic pancreatitis tissues accompanied by increased CCL5 and CD163 (markers of M2-type macrophages), indicating the important role of NEDDylation in the pathogenesis of chronic pancreatitis (<xref ref-type="bibr" rid="B41">Lin et al., 2021</xref>). In addition, knockout of the ubiquitin ligase SYVN1 or NEDD8 partially restores &#x394;F508-CFTR-mediated Cl-transport in human cystic fibrosis airway epithelia, indicating the important role of NEDD8 in &#x394;F508-CFTR-induced cystic fibrosis (<xref ref-type="bibr" rid="B57">Ramachandran et al., 2016</xref>). The E3 ubiquitin ligase enzyme Parkin and NEDD4 also have the potential to regulate fibroblast activation during fibrogenesis (<xref ref-type="bibr" rid="B65">Shen et al., 2021</xref>).</p>
</sec>
</sec>
<sec id="s4">
<title>4 Roles of SUMOylation and NEDDylation activators and inhibitors in fibrosis</title>
<sec id="s4-1">
<title>4.1 Roles of SUMOylation activators and inhibitors in fibrosis</title>
<p>Efforts have been made to determine the underlying effects and action mechanisms of SUMOylation inhibitors and activators in organ fibrosis. Recent studies have shown the protective roles of SUMOylation activators against liver fibrosis through activation of SUMOylation (<xref ref-type="table" rid="T2">Table 2</xref>). Sclareol isolated from <italic>Salvia sclarea</italic> is a potential SUMOylation activator that downregulates SENP1. Treatment with sclareol has been shown to substantially suppress hepatic stellate cell activation, attenuate liver fibrosis, and improve liver function in two&#xa0;mouse models. Mechanistic studies show that sclareol decreases SENP1 expression to inhibit vascular endothelial growth factor receptor 2 (VEGFR2) SUMOylation in LX-2 cells by affecting VEGFR2 intracellular trafficking (<xref ref-type="bibr" rid="B21">Ge et al., 2023</xref>). Meanwhile, SUMOylation inhibition attenuates hepatic fibrosis by modulating the profibrotic or antifibrotic factors. Ginkgolic acid is a SUMOylation inhibitor that reduces the expression of SAE1. Mechanically, ginkgolic acid downregulates SAE1 to induce ferroptosis of the hepatic stellate cells, ultimately leading to antihepatic fibrosis effects (<xref ref-type="bibr" rid="B92">Zhang et al., 2024a</xref>). FXR is a promising therapeutic target against liver fibrosis whose enhanced SUMOylation weakens the effect of obeticholic acid (FXR receptor agonist) against hepatic stellate cell activation. The triple mutation of FXR at Lys122, Lys275, and Glu277 facilitates its activity. Interestingly, coadministration of obeticholic acid and SUMOylation inhibitors (ginkgolic acid and spectinomycin) has been found to significantly alleviate liver fibrosis (<xref ref-type="bibr" rid="B99">Zhou et al., 2020b</xref>). Treatment with S-adenosylmethionine (SAMe), a natural Ubc9-dependent SUMOylation inhibitor, shows obvious hepatic protection through inhibition of hepatic cystogenesis and fibrosis along with decreased liver/body weight ratio and liver volume. Mechanically, SAMe interrupts SUMO1 to suppress proteasome hyperactivity while activating unfolded protein response and stress-related apoptosis (<xref ref-type="bibr" rid="B33">Lee-Law et al., 2021</xref>), indicating that it could be a candidate for treating liver fibrosis.</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Profibrotic and antifibrotic effects of SUMOylation and NEDDylation activators and inhibitors as well as their target organs, related diseases, and biochemical functions.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Target organs</th>
<th align="left">Related diseases</th>
<th align="left">Compounds</th>
<th align="left">Activators or inhibitors</th>
<th align="left">Target substrates/related proteins</th>
<th align="left">Biological functions</th>
<th align="left">References</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td colspan="7" align="center">SUMOylation</td>
</tr>
<tr>
<td rowspan="4" align="left">Liver</td>
<td align="left">Bile-duct ligation and CCl<sub>4</sub>-induced liver fibrosis</td>
<td align="left">Sclareol</td>
<td align="left">Activator</td>
<td align="left">VEGFR2</td>
<td align="left">Decreasing SENP1 expression to inhibit VEGFR2 SUMOylation against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B21">Ge et al. (2023)</xref>
</td>
</tr>
<tr>
<td align="left">CCl<sub>4</sub> and thioacetamide-induced liver fibrosis</td>
<td align="left">Ginkgolic acid</td>
<td align="left">Inhibitor</td>
<td align="left">SAE1</td>
<td align="left">Downregulating SAE1 to induce ferroptosis of hepatic stellate cells against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B92">Zhang et al. (2024a)</xref>
</td>
</tr>
<tr>
<td align="left">NASH</td>
<td align="left">Ginkgolic acid<break/>Spectinomycin</td>
<td align="left">Inhibitor</td>
<td align="left">Global SUMOylation</td>
<td align="left">Modulating STAT3 phosphorylation against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B99">Zhou et al. (2020b)</xref>
</td>
</tr>
<tr>
<td align="left">Polycystic liver diseases</td>
<td align="left">SAMe</td>
<td align="left">Inhibitor</td>
<td align="left">Ubc9</td>
<td align="left">Interrupting SUMO1 to suppress proteasome hyperactivity to activate unfolded protein response and apoptosis against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B33">Lee-Law et al. (2021)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Lung</td>
<td align="left">1-NP instillation in lung</td>
<td align="left">1-NP</td>
<td align="left">Activator</td>
<td align="left">ALKBH5</td>
<td align="left">Facilitating ALKBH5 SUMOylation and then causing its ubiquitination and proteasomal degradation to accelerate fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B37">Li et al. (2024b)</xref>
</td>
</tr>
<tr>
<td align="left">Idiopathic pulmonary fibrosis</td>
<td align="left">Ginkgolic acid</td>
<td align="left">Inhibitor</td>
<td align="left">SUMO1</td>
<td align="left">Decreasing SUMO1/2/3 and increasing SENP overexpression to suppress Smad4 SUMOylation and regulate EMTs and ROS production against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B18">Ding et al. (2022),</xref> <xref ref-type="bibr" rid="B90">Yu et al. (2022b)</xref>
</td>
</tr>
<tr>
<td rowspan="6" align="left">Heart</td>
<td align="left">Myocardial ischemic Injury</td>
<td align="left">Puerarin</td>
<td align="left">Activator</td>
<td align="left">SUMO2</td>
<td align="left">Facilitating SUMO2 expression and then activating ER/ERK pathway against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B95">Zhao et al. (2021)</xref>
</td>
</tr>
<tr>
<td align="left">Transaortic constriction</td>
<td align="left">(&#x2212;)-Epicatechin</td>
<td align="left">Activator</td>
<td align="left">Sirt1</td>
<td align="left">Promoting Sirt1 SUMOylation to suppress fibrogenesis via AKT/GSK3&#x3b2; pathway</td>
<td align="left">
<xref ref-type="bibr" rid="B47">Luo et al. (2022)</xref>
</td>
</tr>
<tr>
<td align="left">Transverse aortic constriction</td>
<td align="left">QFYXF</td>
<td align="left">Activator</td>
<td align="left">SERCA2a</td>
<td align="left">Boosting &#x3b2;-arrestin2-mediated SERCA2a SUMOylation and expression</td>
<td align="left">
<xref ref-type="bibr" rid="B76">Wang et al. (2024)</xref>
</td>
</tr>
<tr>
<td align="left">Transverse aortic constriction</td>
<td align="left">LY364947<break/>Juglone</td>
<td align="left">Inhibitor</td>
<td align="left">PML</td>
<td align="left">Reducing the mRNA and protein expression of TGF-&#x3b2;1 and Pin1 to delay cardiac fibrosis process</td>
<td align="left">
<xref ref-type="bibr" rid="B79">Wu et al. (2019)</xref>
</td>
</tr>
<tr>
<td align="left">Myocardial infarction</td>
<td align="left">Ginkgolic acid</td>
<td align="left">Inhibitor</td>
<td align="left">SUMO1</td>
<td align="left">Controlling TGF-&#x3b2;1-induced PML/p53 interaction to suppress cardiac fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B31">Huang et al. (2023)</xref>
</td>
</tr>
<tr>
<td align="left">Myocardial ischemic Injury</td>
<td align="left">Arsenic trioxide</td>
<td align="left">Inhibitor</td>
<td align="left">PML</td>
<td align="left">Downregulating RNF4 and PML SUMOylation to suppress myocardial apoptosis and fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Qiu et al. (2020)</xref>
</td>
</tr>
<tr>
<td colspan="7" align="center">NEDDylation</td>
</tr>
<tr>
<td rowspan="3" align="left">Liver</td>
<td align="left">Bile-duct ligation and CCl<sub>4</sub>-induced liver fibrosis</td>
<td rowspan="2" align="left">MLN4924</td>
<td rowspan="2" align="left">Inhibitor</td>
<td rowspan="2" align="left">NAE</td>
<td align="left">Modulating the accumulation of c-Jun against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B106">Zubiete-Franco et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">Bleomycin-induced pulmonary fibrosis</td>
<td align="left">suppressing NF-&#x3ba;B responses and MAPK activity against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B16">Deng et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">Acute liver failure</td>
<td align="left">N-acetylcysteine</td>
<td align="left">Inhibitor</td>
<td align="left">NAE</td>
<td align="left">Reducing hepatic NAE1 expression to prevent liver inflammation, fibrosis and injury</td>
<td align="left">
<xref ref-type="bibr" rid="B85">Xu et al. (2022)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Lung</td>
<td align="left">Human pulmonary fibroblasts</td>
<td align="left">Celastrol</td>
<td align="left">&#x2014;</td>
<td align="left">Cullin1</td>
<td align="left">Facilitating the interactions between CAND1 and cullin1 to suppress EMTs against fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B102">Zhou et al. (2022c)</xref>
</td>
</tr>
<tr>
<td align="left">CCl<sub>4</sub>-induced liver fibrosis</td>
<td align="left">HZX-960</td>
<td align="left">Inhibitor</td>
<td align="left">Cullin3</td>
<td align="left">Blocking the interaction of DCN1 (co-E3 ligase) and Ubc12 and inhibiting cullin3 NEDDylation against liver fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B100">Zhou et al. (2022a)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Heart</td>
<td align="left">Doxorubicin-induced cardiac fibrosis</td>
<td align="left">MLN4924</td>
<td align="left">Inhibitor</td>
<td align="left">NAE</td>
<td align="left">Maintaining mitochondrial function, alleviating fibrosis, cardiomyocyte apoptosis and oxidative stress damage, and boosting cardiac contractile function</td>
<td align="left">
<xref ref-type="bibr" rid="B12">Chen et al. (2024b)</xref>
</td>
</tr>
<tr>
<td align="left">Pressure overload-cardiac fibrosis</td>
<td align="left">DN-2</td>
<td align="left">Inhibitor</td>
<td align="left">Cullin3</td>
<td align="left">Inhibiting cullin3 NEDDylation to reverse cardiac fibroblast activation</td>
<td align="left">
<xref ref-type="bibr" rid="B28">He et al. (2022)</xref>
</td>
</tr>
<tr>
<td align="left">Pancreas</td>
<td align="left">Chronic pancreatitis</td>
<td align="left">MLN4924</td>
<td align="left">Inhibitor</td>
<td align="left">NAE</td>
<td align="left">Promoting CCL5-mediated M2 macrophage infiltration, and the blockage of CCL5 to aggravate fibrosis</td>
<td align="left">
<xref ref-type="bibr" rid="B41">Lin et al. (2021)</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Exposure to 1-nitropyrene (1-NP) has been found to trigger pulmonary fibrosis in mice, and 1-NP is also identified as an activator of AlkB homolog 5 (ALKBH5) SUMOylation. Mechanically, 1-NP facilitates ALKBH5 SUMOylation followed by ALKBH5 ubiquitination and proteasomal degradation in mouse lung epithelial-12 cells (<xref ref-type="bibr" rid="B37">Li et al., 2024b</xref>). Interestingly, inhibition of SUMO1 exhibits protection against pulmonary fibrosis. Ginkgolic acid functions as a SUMO1 inhibitor to block idiopathic pulmonary fibrosis. Mechanically, ginkgolic acid suppresses upregulation of SUMO1/2/3 and promotes SENP overexpression. SENP1 inhibits Smad4 SUMOylation while regulating EMT and reactive oxygen species (ROS) production (<xref ref-type="bibr" rid="B18">Ding et al., 2022</xref>; <xref ref-type="bibr" rid="B90">Yu et al., 2022b</xref>). These results provide solid evidence that SUMOylation inhibitors and activators are potential candidates against pulmonary fibrosis.</p>
<p>Both SUMOylation inhibitors and activators exert antifibrotic effects in heart tissues (<xref ref-type="table" rid="T2">Table 2</xref>). Puerarin alleviates cardiac inflammation and cardiac fibrosis by reducing lactate dehydrogenase, COX-2, galectin-3, and cleaved PARP-1. Mechanically, puerarin facilitates SUMO2 expression and SUMOylation before activating the ER/ERK pathway to exert cardioprotective effects (<xref ref-type="bibr" rid="B95">Zhao et al., 2021</xref>). (-)-Epicatechin blocks the transformation of cardiac fibroblasts to myofibroblasts against cardiac fibrosis in a Sirt1-dependent manner. The underlying mechanism involves Sirt1 activation by the transcription specificity protein 1 and Sirt1 SUMOylation to suppress fibrogenesis via the AKT/GSK3&#x3b2; pathway (<xref ref-type="bibr" rid="B47">Luo et al., 2022</xref>). The Qifu Yixin formula (QFYXF) of traditional Chinese medicine exhibits cardiac protection via restoration of cardiac function as well as amelioration of myocardial fibrosis and hypertrophy. The effects of QFYXF are related to enhanced sarcoplasmic reticulum Ca<sup>2&#x2b;</sup>-ATPase 2 (SERCA2a) expression and SUMOylation. Molecular docking results show that the main active compounds in QFYXF have high affinities to &#x3b2;-arrestin2, SERCA2a, and SUMO1, with SERCA2a having high affinity to SUMO1. QFYXF exerts antifibrotic effects by boosting &#x3b2;-arrestin2-mediated SERCA2a SUMOylation and expression (<xref ref-type="bibr" rid="B76">Wang et al., 2024</xref>). Furthermore, inhibition of PML SUMOylation by LY364947 or Juglone significantly reduces the mRNA and protein expressions of TGF-&#x3b2;1 and Pin1 to delay cardiac fibrosis (<xref ref-type="bibr" rid="B79">Wu et al., 2019</xref>). Pharmacological inhibition of the SUMO pathway by the SUMO1 inhibitor ginkgolic acid can substantially control TGF-&#x3b2;1-induced PML/p53 interactions to suppress cardiac fibrosis (<xref ref-type="bibr" rid="B31">Huang et al., 2023</xref>). Treatment with arsenic trioxide, which is an ROS inhibitor, reduces RNF4 expression and PML SUMOylation to suppress myocardial apoptosis and fibrosis against myocardial infarction (<xref ref-type="bibr" rid="B56">Qiu et al., 2020</xref>). Various natural products have also been identified as vital regulators in SUMOylation (<xref ref-type="bibr" rid="B44">Liu et al., 2022</xref>). These findings provide potential candidates against cardiac fibrosis through the regulation of SUMOylation.</p>
</sec>
<sec id="s4-2">
<title>4.2 Roles of NEDDylation activators and inhibitors in fibrosis</title>
<p>NEDDylation activators and inhibitors have also been found to modulate liver fibrosis (<xref ref-type="table" rid="T2">Table 2</xref>). MLN4924, also called as pevonedistat, is a first-in-class NAE inhibitor. The inhibition of NEDDylation by MLN4924 triggers hepatic stellate cell apoptosis to prevent liver injury, inflammation, and fibrosis through the accumulation of c-Jun (<xref ref-type="bibr" rid="B106">Zubiete-Franco et al., 2017</xref>). MLN4924 controls the NEDDylation of CRLs to delay liver fibrosis progression by suppressing NF-&#x3ba;B responses and MAPK activity (<xref ref-type="bibr" rid="B16">Deng et al., 2017</xref>). Treatment with N-acetylcysteine, a glutathione surrogate and antioxidant, has been found to significantly reduce hepatic NAE1 expression to prevent liver inflammation, fibrosis, and injury in the acute liver failure mouse model (<xref ref-type="bibr" rid="B85">Xu et al., 2022</xref>).</p>
<p>Celastrol is a pentacyclic triterpene compound isolated from <italic>Tripterygium wilfordii</italic> as a novel treatment for pulmonary fibrosis; it exhibits antifibrotic effects through the covalent linkage of CAND1 at the Cys264 residue. Celastrol treatment influences cullin1 NEDDylation; celastrol also exerts antifibrotic effects in a CAND1-dependent manner and facilitates interactions between CAND1 and cullin1 to activate the Skp1/cullin1/F-box ubiquitin ligases that control EMTs (<xref ref-type="bibr" rid="B102">Zhou et al., 2022c</xref>). Additionally, HZX-960 has been identified as an inhibitor that blocks the interaction of DCN1 (co-E3 ligase) with Ubc12 and inhibits cullin3 NEDDylation against liver fibrosis. HZX-960 attenuates liver fibrotic signaling by suppressing collagen I and &#x3b1;-SMA while promoting Nrf2, HO-1, and NQO-1, indicating that it is a promising therapeutic candidate against liver fibrosis (<xref ref-type="bibr" rid="B100">Zhou et al., 2022a</xref>).</p>
<p>In the heart, MLN4924 exerts antifibrotic properties (<xref ref-type="table" rid="T2">Table 2</xref>); MLN4924 mitigates doxorubicin-induced cardiotoxicity by maintaining mitochondrial function, alleviating cardiomyocyte apoptosis, suppressing oxidative-stress-induced damage, boosting cardiac contractile function, inhibiting cardiac fibrosis, and impeding cardiac remodeling. Mechanistically, MLN4924 delays cardiac NEDDylation and offers cardiac protection by limiting NAE activity (<xref ref-type="bibr" rid="B12">Chen et al., 2024b</xref>). The antifibrotic effects of DCN1 have also been demonstrated in cardiac fibrosis, where DCN1 is upregulated in the cardiac fibroblast and pressure overloaded mouse hearts. The compound DN-2 has been optimized as a potent DCN1-Ubc12 inhibitor and shown to have high affinity to DCN1; DN-2 effectively reverses cardiac fibroblast activation by inhibiting cullin3 NEDDylation (<xref ref-type="bibr" rid="B28">He et al., 2022</xref>). These results highlight the potential of DCN1 as a promising therapeutic target against organ fibrosis. The inhibition of global NEDDylation by MLN4924 obviously aggravates chronic pancreatitis by promoting CCL5-mediated M2 macrophage infiltration, and the blockage of CCL5 counteracts MLN4924-mediated chronic pancreatitis. A mechanistic study showed that inactivation of CRLs stabilizes the level of HIF-1&#x3b1; to facilitate CCL5 upregulation and transactivation (<xref ref-type="bibr" rid="B41">Lin et al., 2021</xref>).</p>
</sec>
</sec>
<sec id="s5">
<title>5 Conclusion and perspectives</title>
<p>PTMs enhance the functional diversity of proteins by modulating the covalent modifications of the functional groups or proteins to induce slicing or degradation, thereby influencing the physiological and pathophysiological processes (<xref ref-type="bibr" rid="B62">Schepers et al., 2023</xref>; <xref ref-type="bibr" rid="B77">Wang and Tong, 2023c</xref>). Ubiquitination controls protein degradation, transcriptional regulation, cell survival, protein&#x2013;protein interactions, and intracellular trafficking (<xref ref-type="bibr" rid="B24">Gonz&#xe1;lez et al., 2023</xref>; <xref ref-type="bibr" rid="B27">Gu et al., 2023b</xref>). The three-step process of ubiquitination involves activation, conjugation, and ligation through the E1 activating, E2 conjugating, and E3 ligase enzymes. The processes of SUMOylation and NEDDylation are also similar to ubiquitination, but their enzymes are distinguishable from ubiquitination. In SUMOylation, the E1 activating enzyme consists of the SAE1 and SAE2 subunits, and Ubc9 is the only E2 enzyme. In NEDDylation, the NAE E1 activating enzyme consists of the NAE1 and Uba3 subunits. SUMOylation participates in nuclear&#x2013;cytoplasmic transfer, genomic integrity, translational regulation, and cell-cycle regulation, while NEDDylation contributes to DNA replication and repair, chromatin structure, translational regulation, and caryomitosis (<xref ref-type="bibr" rid="B59">Ren et al., 2024</xref>; <xref ref-type="bibr" rid="B69">Tan et al., 2023</xref>; <xref ref-type="bibr" rid="B86">Xu et al., 2023</xref>; <xref ref-type="bibr" rid="B105">Zou et al., 2023</xref>). SUMOylation and NEDDylation can be reversed by SENPs and NEDP1, respectively.</p>
<p>Emerging evidence has shown that SUMOylation and NEDDylation play pivotal and diverse roles in organ fibrosis by mediating the PTMs of profibrotic or antifibrotic factors. In the liver, SUMOylation of FXR at Lys122, Lys275, and Glu277 along with the liver X receptor &#x3b1; has been found to attenuate fibrosis (<xref ref-type="bibr" rid="B11">Chen et al., 2019</xref>; <xref ref-type="bibr" rid="B99">Zhou et al., 2020b</xref>) while SAE1 contributes to fibrosis. Upregulation of SUMO1, SUMO2, and Ubc9 have been reported to aggravate pulmonary fibrosis (<xref ref-type="bibr" rid="B90">Yu et al., 2022b</xref>; <xref ref-type="bibr" rid="B98">Zhou et al., 2020a</xref>). In the kidneys, SUMOylation of NR5A2 at Lys224 and that of STAT1 have been found to promote EMT and fibrosis (<xref ref-type="bibr" rid="B3">Arvaniti et al., 2016</xref>; <xref ref-type="bibr" rid="B26">Gu et al., 2023a</xref>; <xref ref-type="bibr" rid="B54">Politis and Charonis, 2022</xref>), whereas SUMOylation of Sirt3 has been shown to suppress fibroblast-induced repair and fibrosis (<xref ref-type="bibr" rid="B103">Zhu et al., 2023</xref>). SUMOylation of HIF-1&#x3b1; is also involved in renal fibrosis through regulation of the TGF-&#x3b2;/Smad pathway (<xref ref-type="bibr" rid="B35">Li et al., 2019</xref>; <xref ref-type="bibr" rid="B87">Yang et al., 2019</xref>). SUMOylation of Vps34, Beclin1, and Sirt1 have been noted to obviously suppress cardiac fibrosis (<xref ref-type="bibr" rid="B47">Luo et al., 2022</xref>; <xref ref-type="bibr" rid="B82">Xiao et al., 2020</xref>), while SUMO2 was observed to affect cardiac fibrosis through dual regulation along with STAT1 (<xref ref-type="bibr" rid="B58">Rangrez et al., 2020</xref>). Additionally, SUMOylation of CFTR and SNIP1 was found to facilitate fibrosis (<xref ref-type="bibr" rid="B13">Chen et al., 2024c</xref>; <xref ref-type="bibr" rid="B23">Gong et al., 2019</xref>), while SUMOylation of Twist2 at Lys129 was noted to accelerate fibrosis <italic>in vitro</italic> (<xref ref-type="bibr" rid="B91">Zeng et al., 2021</xref>).</p>
<p>Notably, although the roles of SUMOylation and NEDDylation are diverse in different organs, their regulation of PML, HIF-1&#x3b1;, and TGF-&#x3b2; are common in fibrogenesis. SUMOylation of PML promotes fibrosis in the lung and heart tissues, and the underlying mechanism is involved in facilitating PML nuclear body activation of the TGF-&#x3b2;/Smad pathway as well as recruitment and activation of p53 (<xref ref-type="bibr" rid="B14">Dai et al., 2020</xref>; <xref ref-type="bibr" rid="B31">Huang et al., 2023</xref>; <xref ref-type="bibr" rid="B34">Li et al., 2024a</xref>; <xref ref-type="bibr" rid="B56">Qiu et al., 2020</xref>; <xref ref-type="bibr" rid="B79">Wu et al., 2019</xref>). Further investigations have highlighted the vital role of SUMOylation in the TGF-&#x3b2;/Smad pathway; SUMOylation of the TGF-&#x3b2; receptor I at Lys385 and Lys389 as well as Smad4 at Lys113 and Lys159 can control the generation of myofibroblasts and EMTs to influence hepatic fibrosis (<xref ref-type="bibr" rid="B75">Wang et al., 2021</xref>). Ubc9 was found to participate in pulmonary and cardiac fibrosis; upregulation of Ubc9 was observed in fibrotic pulmonary tissues, whereas overexpression of Ubc9 was noted to suppress cardiomyocyte apoptosis against fibrosis (<xref ref-type="bibr" rid="B82">Xiao et al., 2020</xref>; <xref ref-type="bibr" rid="B98">Zhou et al., 2020a</xref>). These studies have proved the vital role of SUMOylation in organ fibrosis and its function as a potential target against organ fibrosis.</p>
<p>Global NEDDylation was found to exacerbate liver fibrosis through activation of the Eph receptor tyrosine kinase EphB1 as well as upregulation of the chemokine (C-X-C motif) ligand 1 and CCL2 expression to accelerate fibrosis (<xref ref-type="bibr" rid="B36">Li et al., 2023</xref>; <xref ref-type="bibr" rid="B106">Zubiete-Franco et al., 2017</xref>). NEDDylation of cullin3 induces Nrf2 dysfunction and AGER1 downregulation to trigger fibrosis (<xref ref-type="bibr" rid="B15">Dehnad et al., 2020</xref>; <xref ref-type="bibr" rid="B32">Kumar et al., 2019</xref>), and NEDDylation of NIK SRSF3 at Lys11 can alleviate liver fibrosis (<xref ref-type="bibr" rid="B85">Xu et al., 2022</xref>). UBE2M has been found to drive fibrogenesis in chronic pancreatitis by suppressing CCL5 and CD163 expressions (<xref ref-type="bibr" rid="B41">Lin et al., 2021</xref>). Interestingly, NEDD8 ameliorates liver fibrosis but promotes cystic fibrosis in the lungs (<xref ref-type="bibr" rid="B57">Ramachandran et al., 2016</xref>; <xref ref-type="bibr" rid="B64">Serrano-Maci&#xe1; et al., 2021</xref>), indicating the diverse roles of NEDDylation in different organ fibrosis. These results provide solid evidence and highlight NEDDylation as a potential therapeutic target for treating organ fibrosis.</p>
<p>The activators and inhibitors of SUMOylation are potential candidates that can influence organ fibrosis. Sclareol activates VEGFR2 SUMOylation against hepatic fibrosis, and SAMe inhibits Ubc9 to interrupt SUMO1 and activate unfolded protein responses against hepatic fibrosis (<xref ref-type="bibr" rid="B21">Ge et al., 2023</xref>; <xref ref-type="bibr" rid="B33">Lee-Law et al., 2021</xref>). The SUMOylation activator 1-NP promotes ALKBH5 SUMOylation and subsequent ubiquitination as well as proteasomal degradation to trigger lung fibrosis (<xref ref-type="bibr" rid="B37">Li et al., 2024b</xref>). In the heart, puerarin functions as a SUMOylation activator to facilitate SUMO2 expression and activate the ER/ERK pathway against fibrosis (<xref ref-type="bibr" rid="B95">Zhao et al., 2021</xref>). (-)-Epicatechin promotes Sirt1 SUMOylation to suppress cardiac fibrogenesis by modulating the AKT/GSK3&#x3b2; pathway (<xref ref-type="bibr" rid="B47">Luo et al., 2022</xref>). QFYXF promotes SERCA2a SUMOylation and expression in the treatment of cardiac fibrosis (<xref ref-type="bibr" rid="B76">Wang et al., 2024</xref>), while LY364947 and juglone obviously suppress PML SUMOylation to reduce the mRNA and protein expressions of TGF-&#x3b2;1 and Pin1 to delay cardiac fibrosis (<xref ref-type="bibr" rid="B79">Wu et al., 2019</xref>). Arsenic trioxide helps PML SUMOylation to reduce RNF4 against myocardial apoptosis and fibrosis (<xref ref-type="bibr" rid="B56">Qiu et al., 2020</xref>). Notably, ginkgolic acid alleviates fibrosis in the liver, lungs, and heart by downregulating SAE1, modulating STAT3 phosphorylation, and influencing PML/p53 interactions (<xref ref-type="bibr" rid="B18">Ding et al., 2022</xref>; <xref ref-type="bibr" rid="B31">Huang et al., 2023</xref>; <xref ref-type="bibr" rid="B90">Yu et al., 2022b</xref>; <xref ref-type="bibr" rid="B92">Zhang et al., 2024a</xref>; <xref ref-type="bibr" rid="B99">Zhou et al., 2020b</xref>). MLN4924 as a first-line NEDDylation inhibitor exhibits antifibrotic properties in the liver, heart, and pancreas. MLN4924 exerts antifibrotic effects by modulating c-Jun accumulation, NF-&#x3ba;B responses and MAPK activity, mitochondrial functions, and CCL5-mediated M2 macrophage infiltration (<xref ref-type="bibr" rid="B16">Deng et al., 2017</xref>; <xref ref-type="bibr" rid="B41">Lin et al., 2021</xref>; <xref ref-type="bibr" rid="B106">Zubiete-Franco et al., 2017</xref>). N-acetylcysteine reduces hepatic NAE1 expression to prevent hepatic inflammation and fibrotic injury (<xref ref-type="bibr" rid="B85">Xu et al., 2022</xref>), while celastrol targets cullin1 to facilitate the interactions between CAND1 and cullin1 to suppress EMTs and pulmonary fibrosis (<xref ref-type="bibr" rid="B100">Zhou et al., 2022a</xref>). Both DN-2 and HZX-960 inhibit cullin3 NEDDylation against fibrosis; DN-2 inhibits cullin3 NEDDylation to reverse cardiac fibroblast activation, while HZX-960 targets cullin3 to block the interaction of DCN1 (co-E3 ligase) and Ubc12 as well as inhibit cullin3 NEDDylation against liver fibrosis (<xref ref-type="bibr" rid="B102">Zhou et al., 2022c</xref>). Even though they target different profibrotic/antifibrotic factors, the activators and inhibitors of SUMOylation/NEDDylation exhibit therapeutic properties against organ fibrosis, suggesting them as potential candidates in the treatment of organ fibrosis.</p>
<p>However, some limitations hinder the recognition and extensive use of SUMOylation/NEDDylation activators and inhibitors in the treatment of organ fibrosis. The primary drawback is the limited number of clinical and preclinical investigations on SUMOylation/NEDDylation activators and inhibitors, especially the lack of high-quality evidence identifying their therapeutic effects and mechanisms. Few clinical studies have shown the therapeutic effects and mechanisms of the SUMOylation and NEDDylation activators and inhibitors in the treatment of organ fibrosis. Notably, some clinical trials have been designed to investigate the effects of MLN4924 in the treatment of advanced solid tumors, acute myeloid leukemia, and myelodysplastic syndromes (<xref ref-type="bibr" rid="B1">Ad&#xe8;s et al., 2022</xref>; <xref ref-type="bibr" rid="B60">Saliba et al., 2023</xref>; <xref ref-type="bibr" rid="B61">Sarantopoulos et al., 2016</xref>; <xref ref-type="bibr" rid="B66">Short et al., 2023</xref>); the SAE inhibitor subasumstat (TAK-981) was designed to treat head and neck carcinomas (<xref ref-type="bibr" rid="B17">Derry et al., 2023</xref>). Although these clinical trials have not targeted organ fibrosis, they can provide references for their potential use in organ fibrosis. Another limitation is the identification of potentially efficient SUMOylation and NEDDylation substrates. For example, the roles of TGF-&#x3b2; and PML are vital in organ fibrosis, and their SUMOylation/NEDDylation are considered as important regulators of activity in organ fibrosis. Hence, efficient substrates need to be identified and verified, through which we could also obtain references beyond the research scope of organ fibrosis. We can use bioinformatics methods like feature extraction and machine learning (<xref ref-type="bibr" rid="B96">Zhao et al., 2022</xref>) to predict SUMOylation sites. The level of NEDD8 can be a potential marker of organ fibrosis. The Cancer Genome Atlas (TCGA) database and tissue arrays can be used to evaluate the clinical relevance of NEDD8 expression in disease, and quantitative proteomic analyses may be helpful for exploring the knockdown of disturbed biological pathways (<xref ref-type="bibr" rid="B81">Xian et al., 2021</xref>). Biotinylated NEDD8 (<sup>bio</sup>NEDD8) transgenic mice can be used in the pull-down of NEDDylated liver proteins and characterization of NEDDylomes in liver injury models (<xref ref-type="bibr" rid="B63">Serrano-Maci&#xe1; et al., 2023</xref>) as promising strategies for fast selection and identification of NEDDylated proteins. Additionally, the use of new methods in cancer research allows SUMOylation-related genes as potential novel prognostic signatures and predictors of organ fibrosis (<xref ref-type="bibr" rid="B67">Sun et al., 2023</xref>; <xref ref-type="bibr" rid="B72">Wang et al., 2023a</xref>). Although clinical and related studies on SUMOylation and NEDDylation as well as their activators and inhibitors are limited, the potential of SUMOylation/NEDDylation has been verified in organ fibrosis treatment. Overall, SUMOylation and NEDDylation are promising therapeutic targets for organ fibrosis, so deeper investigations and clinical trials are needed to verify the therapeutic benefits of their activators and inhibitors to patients.</p>
</sec>
</body>
<back>
<sec sec-type="author-contributions" id="s6">
<title>Author contributions</title>
<p>JH: writing&#x2013;original draft and writing&#x2013;review and editing. JW: writing&#x2013;original draft and writing&#x2013;review and editing. W-TK: writing&#x2013;review and editing. L-NX: writing&#x2013;review and editing. Y-LT: writing&#x2013;review and editing. D-LZ: writing&#x2013;review and editing. PL: project administration, supervision, and writing&#x2013;review and editing. D-QC: conceptualization and writing&#x2013;original draft.</p>
</sec>
<sec sec-type="funding-information" id="s7">
<title>Funding</title>
<p>The authors declare that financial support was received for the research, authorship, and/or publication of this article. This study was supported by the National Natural Science Foundation of China (nos. 82474292, 82104511, 82174296, and U23A20504), Young Elite Scientists Sponsorship Program of the China Association for Science and Technology (no. YESS20230162), Shaanxi Provincial Natural Science Basic Research Program (no. 2024JC-YBQN-0875), Shaanxi Fundamental Science Research Project for Chemistry and Biology (no. 23JHQ047), Yantai School-Government Integration Development Project (no. 2023XDRHXMXK08), Joint Project by the National Division and Provincial Bureau of TCM (no. GZY-KJS-SD-2023-052), Natural Science Foundation of Shandong Province (ZR2020MH350), and Natural Science Foundation of Shaanxi Province (2022JM-503).</p>
</sec>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s9">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations or those of the publisher, editors, and reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ad&#xe8;s</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Girshova</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Doronin</surname>
<given-names>V. A.</given-names>
</name>
<name>
<surname>D&#xed;ez-Campelo</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Valc&#xe1;rcel</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Kambhampati</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Pevonedistat plus azacitidine vs azacitidine alone in higher-risk MDS/chronic myelomonocytic leukemia or low-blast-percentage AML</article-title>. <source>Blood Adv.</source> <volume>6</volume> (<issue>17</issue>), <fpage>5132</fpage>&#x2013;<lpage>5145</lpage>. <pub-id pub-id-type="doi">10.1182/bloodadvances.2022007334</pub-id>
</citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Antar</surname>
<given-names>S. A.</given-names>
</name>
<name>
<surname>Ashour</surname>
<given-names>N. A.</given-names>
</name>
<name>
<surname>Marawan</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Al-Karmalawy</surname>
<given-names>A. A.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>Fibrosis: types, effects, markers, mechanisms for disease progression, and its relation with oxidative stress, immunity, and inflammation</article-title>. <source>Int. J. Mol. Sci.</source> <volume>24</volume> (<issue>4</issue>), <fpage>4004</fpage>. <pub-id pub-id-type="doi">10.3390/ijms24044004</pub-id>
</citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Arvaniti</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Vakrakou</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kaltezioti</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Stergiopoulos</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Prakoura</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Politis</surname>
<given-names>P. K.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Nuclear receptor NR5A2 is involved in the calreticulin gene regulation during renal fibrosis</article-title>. <source>Biochim. Biophys. Acta.</source> <volume>1862</volume> (<issue>9</issue>), <fpage>1774</fpage>&#x2013;<lpage>1785</lpage>. <pub-id pub-id-type="doi">10.1016/j.bbadis.2016.06.013</pub-id>
</citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bailly</surname>
<given-names>A. P.</given-names>
</name>
<name>
<surname>Perrin</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Serrano-Macia</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Maghames</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Leidecker</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Trauchessec</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>The balance between Mono- and NEDD8-chains controlled by NEDP1 upon DNA damage is a regulatory module of the HSP70 ATPase activity</article-title>. <source>Cell Rep.</source> <volume>29</volume> (<issue>1</issue>), <fpage>212</fpage>&#x2013;<lpage>224</lpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2019.08.070</pub-id>
</citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Boh</surname>
<given-names>B. K.</given-names>
</name>
<name>
<surname>Smith</surname>
<given-names>P. G.</given-names>
</name>
<name>
<surname>Hagen</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Neddylation-induced conformational control regulates cullin RING ligase activity <italic>in vivo</italic>
</article-title>. <source>J. Mol. Biol.</source> <volume>409</volume> (<issue>2</issue>), <fpage>136</fpage>&#x2013;<lpage>145</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmb.2011.03.023</pub-id>
</citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Borgo</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>D&#x27;Amore</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Capurro</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Tomati</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Pedemonte</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Bosello Travain</surname>
<given-names>V.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>SUMOylation inhibition enhances protein transcription under CMV promoter: a lesson from a study with the F508del-CFTR mutant</article-title>. <source>Int. J. Mol. Sci.</source> <volume>25</volume> (<issue>4</issue>), <fpage>2302</fpage>. <pub-id pub-id-type="doi">10.3390/ijms25042302</pub-id>
</citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Brand</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Bommeli</surname>
<given-names>E. B.</given-names>
</name>
<name>
<surname>R&#xfc;timann</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Lindenmann</surname>
<given-names>U.</given-names>
</name>
<name>
<surname>Riedl</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Discovery of a dual SENP1 and SENP2 inhibitor</article-title>. <source>Int. J. Mol. Sci.</source> <volume>23</volume> (<issue>20</issue>), <fpage>12085</fpage>. <pub-id pub-id-type="doi">10.3390/ijms232012085</pub-id>
</citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>D. Q.</given-names>
</name>
<name>
<surname>Feng</surname>
<given-names>Y. L.</given-names>
</name>
<name>
<surname>Cao</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>Y. Y.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Natural products as a source for antifibrosis therapy</article-title>. <source>Trends Pharmacol. Sci.</source> <volume>39</volume> (<issue>11</issue>), <fpage>937</fpage>&#x2013;<lpage>952</lpage>. <pub-id pub-id-type="doi">10.1016/j.tips.2018.09.002</pub-id>
</citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ou</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Shu</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Ginkgolide B alleviates oxidative stress and ferroptosis by inhibiting GPX4 ubiquitination to improve diabetic nephropathy</article-title>. <source>Biomed. Pharmacother.</source> <volume>156</volume>, <fpage>113953</fpage>. <pub-id pub-id-type="doi">10.1016/j.biopha.2022.113953</pub-id>
</citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Shao</surname>
<given-names>L.</given-names>
</name>
</person-group> (<year>2024a</year>). <article-title>SENP3 attenuates foam cell formation by deSUMOylating NLRP3 in macrophages stimulated with ox-LDL</article-title>. <source>Cell Signal</source> <volume>117</volume>, <fpage>111092</fpage>. <pub-id pub-id-type="doi">10.1016/j.cellsig.2024.111092</pub-id>
</citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhuang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Qin</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>The metabolic regulator small heterodimer partner contributes to the glucose and lipid homeostasis abnormalities induced by hepatitis C virus infection</article-title>. <source>Metabolism</source> <volume>100</volume>, <fpage>153954</fpage>. <pub-id pub-id-type="doi">10.1016/j.metabol.2019.153954</pub-id>
</citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>K. H.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>J. M.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>J. W.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>X. Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>G. D.</given-names>
</name>
<etal/>
</person-group> (<year>2024b</year>). <article-title>The NEDD8 activating enzyme inhibitor MLN4924 mitigates doxorubicin-induced cardiotoxicity in mice</article-title>. <source>Free Radic. Biol. Med.</source> <volume>219</volume>, <fpage>127</fpage>&#x2013;<lpage>140</lpage>. <pub-id pub-id-type="doi">10.1016/j.freeradbiomed.2024.04.221</pub-id>
</citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>T.</given-names>
</name>
<etal/>
</person-group> (<year>2024c</year>). <article-title>LncRNA MSC-AS1 regulates SNIP1 SUMOylation-mediated EMT by binding to SENP1 to promote intestinal fibrosis in Crohn&#x27;s disease</article-title>. <source>Int. J. Biol. Macromol.</source> <volume>262</volume> (<issue>Pt 1</issue>), <fpage>129921</fpage>. <pub-id pub-id-type="doi">10.1016/j.ijbiomac.2024.129921</pub-id>
</citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dai</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Niu</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Song</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Role of PML SUMOylation in arsenic trioxide-induced fibrosis in HSCs</article-title>. <source>Life Sci.</source> <volume>251</volume>, <fpage>117607</fpage>. <pub-id pub-id-type="doi">10.1016/j.lfs.2020.117607</pub-id>
</citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dehnad</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Fan</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>J. X.</given-names>
</name>
<name>
<surname>Fish</surname>
<given-names>S. R.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>AGER1 downregulation associates with fibrosis in nonalcoholic steatohepatitis and type 2 diabetes</article-title>. <source>J. Clin. Invest.</source> <volume>130</volume> (<issue>8</issue>), <fpage>4320</fpage>&#x2013;<lpage>4330</lpage>. <pub-id pub-id-type="doi">10.1172/jci133051</pub-id>
</citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Deng</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>She</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>MLN4924 protects against bleomycin-induced pulmonary fibrosis by inhibiting the early inflammatory process</article-title>. <source>Am. J. Transl. Res.</source> <volume>9</volume> (<issue>4</issue>), <fpage>1810</fpage>&#x2013;<lpage>1821</lpage>.</citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Derry</surname>
<given-names>J. M. J.</given-names>
</name>
<name>
<surname>Burns</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Frazier</surname>
<given-names>J. P.</given-names>
</name>
<name>
<surname>Beirne</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Grenley</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>DuFort</surname>
<given-names>C. C.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Trackable intratumor microdosing and spatial profiling provide early insights into activity of investigational agents in the intact tumor microenvironment</article-title>. <source>Clin. Cancer Res.</source> <volume>29</volume> (<issue>18</issue>), <fpage>3813</fpage>&#x2013;<lpage>3825</lpage>. <pub-id pub-id-type="doi">10.1158/1078-0432.Ccr-23-0827</pub-id>
</citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ding</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Ding</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Pharmacological activities of ginkgolic acids in relation to autophagy</article-title>. <source>Pharm. (Basel)</source> <volume>15</volume> (<issue>12</issue>), <fpage>1469</fpage>. <pub-id pub-id-type="doi">10.3390/ph15121469</pub-id>
</citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>French</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Koehler</surname>
<given-names>C. F.</given-names>
</name>
<name>
<surname>Hunter</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Emerging functions of branched ubiquitin chains</article-title>. <source>Cell Discov.</source> <volume>7</volume> (<issue>1</issue>), <fpage>6</fpage>. <pub-id pub-id-type="doi">10.1038/s41421-020-00237-y</pub-id>
</citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gadasheva</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Nolze</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Grossmann</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Posttranslational Modifications of the Mineralocorticoid receptor and cardiovascular aging</article-title>. <source>Front. Mol. Biosci.</source> <volume>8</volume>, <fpage>667990</fpage>. <pub-id pub-id-type="doi">10.3389/fmolb.2021.667990</pub-id>
</citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ge</surname>
<given-names>M. X.</given-names>
</name>
<name>
<surname>Niu</surname>
<given-names>W. X.</given-names>
</name>
<name>
<surname>Bao</surname>
<given-names>Y. Y.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>Z. N.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>H. W.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>Sclareol attenuates liver fibrosis through SENP1-mediated VEGFR2 SUMOylation and inhibition of downstream STAT3 signaling</article-title>. <source>Phytother. Res.</source> <volume>37</volume> (<issue>9</issue>), <fpage>3898</fpage>&#x2013;<lpage>3912</lpage>. <pub-id pub-id-type="doi">10.1002/ptr.7845</pub-id>
</citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gomarasca</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Lombardi</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Maroni</surname>
<given-names>P.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>SUMOylation and NEDDylation in primary and metastatic cancers to bone</article-title>. <source>Front. Cell. Dev. Biol.</source> <volume>10</volume>, <fpage>889002</fpage>. <pub-id pub-id-type="doi">10.3389/fcell.2022.889002</pub-id>
</citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gong</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Liao</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Ahner</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Larsen</surname>
<given-names>M. B.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Bertrand</surname>
<given-names>C. A.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Different SUMO paralogues determine the fate of wild-type and mutant CFTRs: biogenesis versus degradation</article-title>. <source>Mol. Biol. Cell</source> <volume>30</volume> (<issue>1</issue>), <fpage>4</fpage>&#x2013;<lpage>16</lpage>. <pub-id pub-id-type="doi">10.1091/mbc.E18-04-0252</pub-id>
</citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gonz&#xe1;lez</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Covarrubias-Pinto</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Bhaskara</surname>
<given-names>R. M.</given-names>
</name>
<name>
<surname>Glogger</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Kuncha</surname>
<given-names>S. K.</given-names>
</name>
<name>
<surname>Xavier</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Ubiquitination regulates ER-phagy and remodelling of endoplasmic reticulum</article-title>. <source>Nature</source> <volume>618</volume> (<issue>7964</issue>), <fpage>394</fpage>&#x2013;<lpage>401</lpage>. <pub-id pub-id-type="doi">10.1038/s41586-023-06089-2</pub-id>
</citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gonzalez-Rellan</surname>
<given-names>M. J.</given-names>
</name>
<name>
<surname>Fern&#xe1;ndez</surname>
<given-names>U.</given-names>
</name>
<name>
<surname>Parracho</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Novoa</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Fondevila</surname>
<given-names>M. F.</given-names>
</name>
<name>
<surname>da Silva Lima</surname>
<given-names>N.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Neddylation of phosphoenolpyruvate carboxykinase 1 controls glucose metabolism</article-title>. <source>Cell Metab.</source> <volume>35</volume> (<issue>9</issue>), <fpage>1630</fpage>&#x2013;<lpage>1645.e5</lpage>. <pub-id pub-id-type="doi">10.1016/j.cmet.2023.07.003</pub-id>
</citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gu</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Feng</surname>
<given-names>X.</given-names>
</name>
<etal/>
</person-group> (<year>2023a</year>). <article-title>Role of SUMOylation of STAT1 in tubular epithelial-mesenchymal transition induced by high glucose</article-title>. <source>Mol. Med. Rep.</source> <volume>27</volume> (<issue>2</issue>), <fpage>42</fpage>. <pub-id pub-id-type="doi">10.3892/mmr.2023.12929</pub-id>
</citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gu</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Nardone</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Kamitaki</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Mao</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Elledge</surname>
<given-names>S. J.</given-names>
</name>
<name>
<surname>Greenberg</surname>
<given-names>M. E.</given-names>
</name>
</person-group> (<year>2023b</year>). <article-title>The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation</article-title>. <source>Science</source> <volume>381</volume> (<issue>6660</issue>), <fpage>eadh5021</fpage>. <pub-id pub-id-type="doi">10.1126/science.adh5021</pub-id>
</citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>He</surname>
<given-names>Z. X.</given-names>
</name>
<name>
<surname>An</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Wei</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>W. J.</given-names>
</name>
<name>
<surname>Wei</surname>
<given-names>B. F.</given-names>
</name>
<name>
<surname>Gong</surname>
<given-names>Y. P.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Discovery of potent and selective 2-(Benzylthio)pyrimidine-based DCN1-UBC12 inhibitors for anticardiac fibrotic effects</article-title>. <source>J. Med. Chem.</source> <volume>65</volume> (<issue>1</issue>), <fpage>163</fpage>&#x2013;<lpage>190</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jmedchem.1c01207</pub-id>
</citation>
</ref>
<ref id="B29">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>He</surname>
<given-names>Z. X.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>W. G.</given-names>
</name>
<name>
<surname>Zengyangzong</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>H. M.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Targeting cullin neddylation for cancer and fibrotic diseases</article-title>. <source>Theranostics</source> <volume>13</volume> (<issue>14</issue>), <fpage>5017</fpage>&#x2013;<lpage>5056</lpage>. <pub-id pub-id-type="doi">10.7150/thno.78876</pub-id>
</citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Henderson</surname>
<given-names>N. C.</given-names>
</name>
<name>
<surname>Rieder</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Wynn</surname>
<given-names>T. A.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Fibrosis: from mechanisms to medicines</article-title>. <source>Nature</source> <volume>587</volume> (<issue>7835</issue>), <fpage>555</fpage>&#x2013;<lpage>566</lpage>. <pub-id pub-id-type="doi">10.1038/s41586-020-2938-9</pub-id>
</citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Huang</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Chang</surname>
<given-names>S. Y.</given-names>
</name>
<name>
<surname>Xue</surname>
<given-names>Y. D.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>N.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Crosstalk between PML and p53 in response to TGF-&#x3b2;1: a new mechanism of cardiac fibroblast activation</article-title>. <source>Int. J. Biol. Sci.</source> <volume>19</volume> (<issue>3</issue>), <fpage>994</fpage>&#x2013;<lpage>1006</lpage>. <pub-id pub-id-type="doi">10.7150/ijbs.76214</pub-id>
</citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kumar</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Sauceda</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Ellies</surname>
<given-names>L. G.</given-names>
</name>
<name>
<surname>Kuo</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Parwal</surname>
<given-names>P.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Degradation of splicing factor SRSF3 contributes to progressive liver disease</article-title>. <source>J. Clin. Invest.</source> <volume>129</volume> (<issue>10</issue>), <fpage>4477</fpage>&#x2013;<lpage>4491</lpage>. <pub-id pub-id-type="doi">10.1172/jci127374</pub-id>
</citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lee-Law</surname>
<given-names>P. Y.</given-names>
</name>
<name>
<surname>Olaizola</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Caballero-Camino</surname>
<given-names>F. J.</given-names>
</name>
<name>
<surname>Izquierdo-Sanchez</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Rodrigues</surname>
<given-names>P. M.</given-names>
</name>
<name>
<surname>Santos-Laso</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Targeting UBC9-mediated protein hyper-SUMOylation in cystic cholangiocytes halts polycystic liver disease in experimental models</article-title>. <source>J. Hepatol.</source> <volume>74</volume> (<issue>2</issue>), <fpage>394</fpage>&#x2013;<lpage>406</lpage>. <pub-id pub-id-type="doi">10.1016/j.jhep.2020.09.010</pub-id>
</citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Qian</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Tay</surname>
<given-names>L. J.</given-names>
</name>
<etal/>
</person-group> (<year>2024a</year>). <article-title>The role and mechanism of SUMO modification in liver disease</article-title>. <source>Biomed. Pharmacother.</source> <volume>177</volume>, <fpage>116898</fpage>. <pub-id pub-id-type="doi">10.1016/j.biopha.2024.116898</pub-id>
</citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Cai</surname>
<given-names>G. Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>X. M.</given-names>
</name>
<name>
<surname>Hong</surname>
<given-names>Q.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Progress of small ubiquitin-related modifiers in kidney diseases</article-title>. <source>Chin. Med. J. Engl.</source> <volume>132</volume> (<issue>4</issue>), <fpage>466</fpage>&#x2013;<lpage>473</lpage>. <pub-id pub-id-type="doi">10.1097/cm9.0000000000000094</pub-id>
</citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Han</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Neddylation of EphB1 regulates its activity and associates with liver fibrosis</article-title>. <source>Int. J. Mol. Sci.</source> <volume>24</volume> (<issue>4</issue>), <fpage>3415</fpage>. <pub-id pub-id-type="doi">10.3390/ijms24043415</pub-id>
</citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname>
<given-names>S. R.</given-names>
</name>
<name>
<surname>Kang</surname>
<given-names>N. N.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>R. R.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>M. D.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>L. H.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>P.</given-names>
</name>
<etal/>
</person-group> (<year>2024b</year>). <article-title>ALKBH5 SUMOylation-mediated FBXW7 m6A modification regulates alveolar cells senescence during 1-nitropyrene-induced pulmonary fibrosis</article-title>. <source>J. Hazard. Mater.</source> <volume>468</volume>, <fpage>133704</fpage>. <pub-id pub-id-type="doi">10.1016/j.jhazmat.2024.133704</pub-id>
</citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Liessi</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Pedemonte</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Armirotti</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Braccia</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Proteomics and metabolomics for cystic fibrosis research</article-title>. <source>Int. J. Mol. Sci.</source> <volume>21</volume> (<issue>15</issue>), <fpage>5439</fpage>. <pub-id pub-id-type="doi">10.3390/ijms21155439</pub-id>
</citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lin</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Pang</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Dai</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>SUMOylation mediates the disassembly of the Smad4 nuclear export complex via RanGAP1 in KELOIDS</article-title>. <source>J. Cell. Mol. Med.</source> <volume>27</volume> (<issue>8</issue>), <fpage>1045</fpage>&#x2013;<lpage>1055</lpage>. <pub-id pub-id-type="doi">10.1111/jcmm.17216</pub-id>
</citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lin</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Pang</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Sumoylation enhances the activity of the TGF-&#x3b2;/SMAD and HIF-1 signaling pathways in keloids</article-title>. <source>Life Sci.</source> <volume>255</volume>, <fpage>117859</fpage>. <pub-id pub-id-type="doi">10.1016/j.lfs.2020.117859</pub-id>
</citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lin</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Feng</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Hua</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Huo</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Neddylation pathway alleviates chronic pancreatitis by reducing HIF1&#x3b1;-CCL5-dependent macrophage infiltration</article-title>. <source>Cell Death Dis.</source> <volume>12</volume> (<issue>3</issue>), <fpage>273</fpage>. <pub-id pub-id-type="doi">10.1038/s41419-021-03549-3</pub-id>
</citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Liu</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Shih</surname>
<given-names>Y. H.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>W. L.</given-names>
</name>
<name>
<surname>Chang</surname>
<given-names>W. L.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y. C.</given-names>
</name>
</person-group> (<year>2023a</year>). <article-title>UBE1C is upregulated and promotes neddylation of p53 in lung cancer</article-title>. <source>Faseb J.</source> <volume>37</volume> (<issue>10</issue>), <fpage>e23181</fpage>. <pub-id pub-id-type="doi">10.1096/fj.202300629R</pub-id>
</citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Liu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Dong</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Zheng</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>X.</given-names>
</name>
<etal/>
</person-group> (<year>2023b</year>). <article-title>De-ubiquitination of SAMHD1 by USP7 promotes DNA damage repair to overcome oncogenic stress and affect chemotherapy sensitivity</article-title>. <source>Oncogene</source> <volume>42</volume> (<issue>22</issue>), <fpage>1843</fpage>&#x2013;<lpage>1856</lpage>. <pub-id pub-id-type="doi">10.1038/s41388-023-02667-w</pub-id>
</citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Liu</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Qiu</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>D. Q.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Natural products against renal fibrosis via modulation of SUMOylation</article-title>. <source>Front. Pharmacol.</source> <volume>13</volume>, <fpage>800810</fpage>. <pub-id pub-id-type="doi">10.3389/fphar.2022.800810</pub-id>
</citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Liu</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Yuan</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Cao</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Xia</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2023c</year>). <article-title>Review: acetylation mechanisms and targeted therapies in cardiac fibrosis</article-title>. <source>Pharmacol. Res.</source> <volume>193</volume>, <fpage>106815</fpage>. <pub-id pub-id-type="doi">10.1016/j.phrs.2023.106815</pub-id>
</citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lu</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Kong</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Hao</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Gu</surname>
<given-names>Z.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>UBE2M-mediated neddylation of TRIM21 regulates obesity-induced inflammation and metabolic disorders</article-title>. <source>Cell Metab.</source> <volume>35</volume> (<issue>8</issue>), <fpage>1390</fpage>&#x2013;<lpage>1405.e8</lpage>. <pub-id pub-id-type="doi">10.1016/j.cmet.2023.05.011</pub-id>
</citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Luo</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Small ubiquitin-related modifier (SUMO)ylation of SIRT1 mediates (-)-epicatechin inhibited-differentiation of cardiac fibroblasts into myofibroblasts</article-title>. <source>Pharm. Biol.</source> <volume>60</volume> (<issue>1</issue>), <fpage>1762</fpage>&#x2013;<lpage>1770</lpage>. <pub-id pub-id-type="doi">10.1080/13880209.2022.2101672</pub-id>
</citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>McCormick</surname>
<given-names>J. A.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>C. L.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Davidge</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Blankenstein</surname>
<given-names>K. I.</given-names>
</name>
<name>
<surname>Terker</surname>
<given-names>A. S.</given-names>
</name>
<etal/>
</person-group> (<year>2014</year>). <article-title>Hyperkalemic hypertension-associated cullin 3 promotes WNK signaling by degrading KLHL3</article-title>. <source>J. Clin. Invest.</source> <volume>124</volume> (<issue>11</issue>), <fpage>4723</fpage>&#x2013;<lpage>4736</lpage>. <pub-id pub-id-type="doi">10.1172/jci76126</pub-id>
</citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Olaizola</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Lee-Law</surname>
<given-names>P. Y.</given-names>
</name>
<name>
<surname>Fernandez-Barrena</surname>
<given-names>M. G.</given-names>
</name>
<name>
<surname>Alvarez</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Cadamuro</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Azkargorta</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Targeting NAE1-mediated protein hyper-NEDDylation halts cholangiocarcinogenesis and impacts on tumor-stroma crosstalk in experimental models</article-title>. <source>J. Hepatol.</source> <volume>77</volume> (<issue>1</issue>), <fpage>177</fpage>&#x2013;<lpage>190</lpage>. <pub-id pub-id-type="doi">10.1016/j.jhep.2022.02.007</pub-id>
</citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pei</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zou</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Kang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>X.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>Senp7 deficiency impairs lipid droplets maturation in white adipose tissues via Plin4 deSUMOylation</article-title>. <source>J. Biol. Chem.</source> <volume>300</volume> (<issue>6</issue>), <fpage>107319</fpage>. <pub-id pub-id-type="doi">10.1016/j.jbc.2024.107319</pub-id>
</citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pellegrino</surname>
<given-names>N. E.</given-names>
</name>
<name>
<surname>Guven</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Gray</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Shah</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Kasture</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Nastke</surname>
<given-names>M. D.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>The next frontier: translational development of ubiquitination, SUMOylation, and NEDDylation in cancer</article-title>. <source>Int. J. Mol. Sci.</source> <volume>23</volume> (<issue>7</issue>), <fpage>3480</fpage>. <pub-id pub-id-type="doi">10.3390/ijms23073480</pub-id>
</citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Peng</surname>
<given-names>M. L.</given-names>
</name>
<name>
<surname>Fu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>C. W.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Ren</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>S. S.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Signaling pathways related to oxidative stress in diabetic cardiomyopathy</article-title>. <source>Front. Endocrinol. (Lausanne)</source> <volume>13</volume>, <fpage>907757</fpage>. <pub-id pub-id-type="doi">10.3389/fendo.2022.907757</pub-id>
</citation>
</ref>
<ref id="B53">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Peters</surname>
<given-names>K. W.</given-names>
</name>
<name>
<surname>Gong</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Frizzell</surname>
<given-names>R. A.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Cystic fibrosis transmembrane conductance regulator folding mutations reveal differences in corrector efficacy linked to increases in immature cystic fibrosis transmembrane conductance regulator expression</article-title>. <source>Front. Physiol.</source> <volume>12</volume>, <fpage>695767</fpage>. <pub-id pub-id-type="doi">10.3389/fphys.2021.695767</pub-id>
</citation>
</ref>
<ref id="B54">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Politis</surname>
<given-names>P. K.</given-names>
</name>
<name>
<surname>Charonis</surname>
<given-names>A. S.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Calreticulin in renal fibrosis: a short review</article-title>. <source>J. Cell. Mol. Med.</source> <volume>26</volume> (<issue>24</issue>), <fpage>5949</fpage>&#x2013;<lpage>5954</lpage>. <pub-id pub-id-type="doi">10.1111/jcmm.17627</pub-id>
</citation>
</ref>
<ref id="B55">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Qi</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Yan</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Su</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Cheng</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>SUMO-specific protease 1 regulates germinal center B cell response through deSUMOylation of PAX5</article-title>. <source>Proc. Natl. Acad. Sci. U. S. A.</source> <volume>121</volume> (<issue>22</issue>), <fpage>e2314619121</fpage>. <pub-id pub-id-type="doi">10.1073/pnas.2314619121</pub-id>
</citation>
</ref>
<ref id="B56">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Qiu</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Han</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Shao</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Paulo</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Knockdown of endogenous RNF4 exacerbates ischaemia-induced cardiomyocyte apoptosis in mice</article-title>. <source>J. Cell. Mol. Med.</source> <volume>24</volume> (<issue>17</issue>), <fpage>9545</fpage>&#x2013;<lpage>9559</lpage>. <pub-id pub-id-type="doi">10.1111/jcmm.15363</pub-id>
</citation>
</ref>
<ref id="B57">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ramachandran</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Osterhaus</surname>
<given-names>S. R.</given-names>
</name>
<name>
<surname>Parekh</surname>
<given-names>K. R.</given-names>
</name>
<name>
<surname>Jacobi</surname>
<given-names>A. M.</given-names>
</name>
<name>
<surname>Behlke</surname>
<given-names>M. A.</given-names>
</name>
<name>
<surname>McCray</surname>
<given-names>P. B.</given-names>
<suffix>Jr.</suffix>
</name>
</person-group> (<year>2016</year>). <article-title>SYVN1, NEDD8, and FBXO2 proteins regulate &#x394;F508 cystic fibrosis transmembrane conductance regulator (CFTR) ubiquitin-mediated proteasomal degradation</article-title>. <source>J. Biol. Chem.</source> <volume>291</volume> (<issue>49</issue>), <fpage>25489</fpage>&#x2013;<lpage>25504</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M116.754283</pub-id>
</citation>
</ref>
<ref id="B58">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rangrez</surname>
<given-names>A. Y.</given-names>
</name>
<name>
<surname>Borlepawar</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Schmiedel</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Deshpande</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Remes</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kumari</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>The E3 ubiquitin ligase HectD3 attenuates cardiac hypertrophy and inflammation in mice</article-title>. <source>Commun. Biol.</source> <volume>3</volume> (<issue>1</issue>), <fpage>562</fpage>. <pub-id pub-id-type="doi">10.1038/s42003-020-01289-2</pub-id>
</citation>
</ref>
<ref id="B59">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ren</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Ding</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>SUMOylation fine-tunes endothelial HEY1 in the regulation of angiogenesis</article-title>. <source>Circ. Res.</source> <volume>134</volume> (<issue>2</issue>), <fpage>203</fpage>&#x2013;<lpage>222</lpage>. <pub-id pub-id-type="doi">10.1161/circresaha.123.323398</pub-id>
</citation>
</ref>
<ref id="B60">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saliba</surname>
<given-names>A. N.</given-names>
</name>
<name>
<surname>Kaufmann</surname>
<given-names>S. H.</given-names>
</name>
<name>
<surname>Stein</surname>
<given-names>E. M.</given-names>
</name>
<name>
<surname>Patel</surname>
<given-names>P. A.</given-names>
</name>
<name>
<surname>Baer</surname>
<given-names>M. R.</given-names>
</name>
<name>
<surname>Stock</surname>
<given-names>W.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Pevonedistat with azacitidine in older patients with TP53-mutated AML: a phase 2 study with laboratory correlates</article-title>. <source>Blood Adv.</source> <volume>7</volume> (<issue>11</issue>), <fpage>2360</fpage>&#x2013;<lpage>2363</lpage>. <pub-id pub-id-type="doi">10.1182/bloodadvances.2022008625</pub-id>
</citation>
</ref>
<ref id="B61">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sarantopoulos</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Shapiro</surname>
<given-names>G. I.</given-names>
</name>
<name>
<surname>Cohen</surname>
<given-names>R. B.</given-names>
</name>
<name>
<surname>Clark</surname>
<given-names>J. W.</given-names>
</name>
<name>
<surname>Kauh</surname>
<given-names>J. S.</given-names>
</name>
<name>
<surname>Weiss</surname>
<given-names>G. J.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Phase I study of the investigational NEDD8-activating enzyme inhibitor pevonedistat (TAK-924/MLN4924) in patients with advanced solid tumors</article-title>. <source>Clin. Cancer Res.</source> <volume>22</volume> (<issue>4</issue>), <fpage>847</fpage>&#x2013;<lpage>857</lpage>. <pub-id pub-id-type="doi">10.1158/1078-0432.Ccr-15-1338</pub-id>
</citation>
</ref>
<ref id="B62">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Schepers</surname>
<given-names>E. J.</given-names>
</name>
<name>
<surname>Glaser</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Zwolshen</surname>
<given-names>H. M.</given-names>
</name>
<name>
<surname>Hartman</surname>
<given-names>S. J.</given-names>
</name>
<name>
<surname>Bondoc</surname>
<given-names>A. J.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>Structural and functional impact of posttranslational modification of glypican-3 on liver carcinogenesis</article-title>. <source>Cancer Res.</source> <volume>83</volume> (<issue>12</issue>), <fpage>1933</fpage>&#x2013;<lpage>1940</lpage>. <pub-id pub-id-type="doi">10.1158/0008-5472.Can-22-3895</pub-id>
</citation>
</ref>
<ref id="B63">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Serrano-Maci&#xe1;</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Delgado</surname>
<given-names>T. C.</given-names>
</name>
<name>
<surname>Mart&#xed;nez-Chantar</surname>
<given-names>M. L.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>Isolation of the hepatic ubiquitome/NEDDylome by streptavidin pull-down assay in the biotinylated ubiquitin ((bio)Ub)/biotinylated NEDD8 ((bio)NEDD8) transgenic mice</article-title>. <source>Methods Mol. Biol.</source> <volume>2602</volume>, <fpage>151</fpage>&#x2013;<lpage>162</lpage>. <pub-id pub-id-type="doi">10.1007/978-1-0716-2859-1_11</pub-id>
</citation>
</ref>
<ref id="B64">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Serrano-Maci&#xe1;</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Sim&#xf3;n</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Gonz&#xe1;lez-Rellan</surname>
<given-names>M. J.</given-names>
</name>
<name>
<surname>Azkargorta</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Goikoetxea-Usandizaga</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Lopitz-Otsoa</surname>
<given-names>F.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Neddylation inhibition ameliorates steatosis in NAFLD by boosting hepatic fatty acid oxidation via the DEPTOR-mTOR axis</article-title>. <source>Mol. Metab.</source> <volume>53</volume>, <fpage>101275</fpage>. <pub-id pub-id-type="doi">10.1016/j.molmet.2021.101275</pub-id>
</citation>
</ref>
<ref id="B65">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shen</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Lyu</surname>
<given-names>L.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>The ubiquitin proteasome system and skin fibrosis</article-title>. <source>Mol. Diagn. Ther.</source> <volume>25</volume> (<issue>1</issue>), <fpage>29</fpage>&#x2013;<lpage>40</lpage>. <pub-id pub-id-type="doi">10.1007/s40291-020-00509-z</pub-id>
</citation>
</ref>
<ref id="B66">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Short</surname>
<given-names>N. J.</given-names>
</name>
<name>
<surname>Muftuoglu</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Ong</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Nasr</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Macaron</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Montalban-Bravo</surname>
<given-names>G.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>A phase 1/2 study of azacitidine, venetoclax and pevonedistat in newly diagnosed secondary AML and in MDS or CMML after failure of hypomethylating agents</article-title>. <source>J. Hematol. Oncol.</source> <volume>16</volume> (<issue>1</issue>), <fpage>73</fpage>. <pub-id pub-id-type="doi">10.1186/s13045-023-01476-8</pub-id>
</citation>
</ref>
<ref id="B67">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sun</surname>
<given-names>J. X.</given-names>
</name>
<name>
<surname>An</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Xiang</surname>
<given-names>J. C.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>J. Z.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>S. G.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>The prognosis-predictive and immunoregulatory role of SUMOylation related genes: potential novel targets in prostate cancer treatment</article-title>. <source>Int. J. Mol. Sci.</source> <volume>24</volume> (<issue>17</issue>), <fpage>13603</fpage>. <pub-id pub-id-type="doi">10.3390/ijms241713603</pub-id>
</citation>
</ref>
<ref id="B68">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sun</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Ou</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Tian</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>SUMOylation of GMFB regulates its stability and function in retinal pigment epithelial cells under hyperglycemia</article-title>. <source>Int. J. Biol. Macromol.</source> <volume>268</volume> (<issue>Pt 2</issue>), <fpage>131678</fpage>. <pub-id pub-id-type="doi">10.1016/j.ijbiomac.2024.131678</pub-id>
</citation>
</ref>
<ref id="B69">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tan</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Cai</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Qi</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Bao</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>SUMOylation of Rho-associated protein kinase 2 induces goblet cell metaplasia in allergic airways</article-title>. <source>Nat. Commun.</source> <volume>14</volume> (<issue>1</issue>), <fpage>3887</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-023-39600-4</pub-id>
</citation>
</ref>
<ref id="B70">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Taru</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Szabo</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Mehal</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Reiberger</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2024</year>). <article-title>Inflammasomes in chronic liver disease: hepatic injury, fibrosis progression and systemic inflammation</article-title>. <source>J. Hepatol.</source> <volume>81</volume>, <fpage>895</fpage>&#x2013;<lpage>910</lpage>. <pub-id pub-id-type="doi">10.1016/j.jhep.2024.06.016</pub-id>
</citation>
</ref>
<ref id="B71">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ungefroren</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>TGF-&#x392; signaling in cancer: control by negative regulators and crosstalk with proinflammatory and fibrogenic pathways</article-title>. <source>Cancers (Basel)</source> <volume>11</volume> (<issue>3</issue>), <fpage>384</fpage>. <pub-id pub-id-type="doi">10.3390/cancers11030384</pub-id>
</citation>
</ref>
<ref id="B72">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Cong</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Jin</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>W.</given-names>
</name>
<etal/>
</person-group> (<year>2023a</year>). <article-title>A novel prognostic signature for hepatocellular carcinoma based on SUMOylation-related genes</article-title>. <source>Sci. Rep.</source> <volume>13</volume> (<issue>1</issue>), <fpage>11233</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-023-38197-4</pub-id>
</citation>
</ref>
<ref id="B73">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Cao</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zheng</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Tu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>SENP1-Sirt3 signaling controls mitochondrial protein acetylation and metabolism</article-title>. <source>Mol. Cell</source> <volume>75</volume> (<issue>4</issue>), <fpage>823</fpage>&#x2013;<lpage>834</lpage>. <pub-id pub-id-type="doi">10.1016/j.molcel.2019.06.008</pub-id>
</citation>
</ref>
<ref id="B74">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Matunis</surname>
<given-names>M. J.</given-names>
</name>
</person-group> (<year>2023b</year>). <article-title>Paralogue-specific roles of SUMO1 and SUMO2/3 in protein quality control and associated diseases</article-title>. <source>Cells</source> <volume>13</volume> (<issue>1</issue>), <fpage>8</fpage>. <pub-id pub-id-type="doi">10.3390/cells13010008</pub-id>
</citation>
</ref>
<ref id="B75">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Dai</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Regulation of transforming growth factor-&#x3b2; signalling by SUMOylation and its role in fibrosis</article-title>. <source>Open Biol.</source> <volume>11</volume> (<issue>11</issue>), <fpage>210043</fpage>. <pub-id pub-id-type="doi">10.1098/rsob.210043</pub-id>
</citation>
</ref>
<ref id="B76">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Wan</surname>
<given-names>Q.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>Qifu Yixin formula improves heart failure by enhancing &#x3b2;-arrestin2 mediated the SUMOylation of SERCA2a</article-title>. <source>Drug Des. devel. Ther.</source> <volume>18</volume>, <fpage>781</fpage>&#x2013;<lpage>799</lpage>. <pub-id pub-id-type="doi">10.2147/dddt.S446324</pub-id>
</citation>
</ref>
<ref id="B77">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Tong</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2023c</year>). <article-title>Protein posttranslational modification in stemness remodeling and its emerging role as a novel therapeutic target in gastrointestinal cancers</article-title>. <source>Int. J. Mol. Sci.</source> <volume>24</volume> (<issue>11</issue>), <fpage>9173</fpage>. <pub-id pub-id-type="doi">10.3390/ijms24119173</pub-id>
</citation>
</ref>
<ref id="B78">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wen</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Xiao</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zeng</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Deng</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2024</year>). <article-title>N6-methyladenosine-modified SENP1, identified by IGF2BP3, is a novel molecular marker in acute myeloid leukemia and aggravates progression by activating AKT signal via de-SUMOylating HDAC2</article-title>. <source>Mol. Cancer</source> <volume>23</volume> (<issue>1</issue>), <fpage>116</fpage>. <pub-id pub-id-type="doi">10.1186/s12943-024-02013-y</pub-id>
</citation>
</ref>
<ref id="B79">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wu</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>L. L.</given-names>
</name>
<name>
<surname>Ni</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>X. X.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>B.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>TGF-&#x3b2;1-PML SUMOylation-peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (Pin1) form a positive feedback loop to regulate cardiac fibrosis</article-title>. <source>J. Cell. Physiol.</source> <volume>234</volume> (<issue>5</issue>), <fpage>6263</fpage>&#x2013;<lpage>6273</lpage>. <pub-id pub-id-type="doi">10.1002/jcp.27357</pub-id>
</citation>
</ref>
<ref id="B80">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wu</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>SUMOylation and DeSUMOylation: prospective therapeutic targets in cancer</article-title>. <source>Life Sci.</source> <volume>332</volume>, <fpage>122085</fpage>. <pub-id pub-id-type="doi">10.1016/j.lfs.2023.122085</pub-id>
</citation>
</ref>
<ref id="B81">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xian</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Cai</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>P.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Overexpressed NEDD8 as a potential therapeutic target in esophageal squamous cell carcinoma</article-title>. <source>Cancer Biol. Med.</source> <volume>19</volume> (<issue>4</issue>), <fpage>504</fpage>&#x2013;<lpage>517</lpage>. <pub-id pub-id-type="doi">10.20892/j.issn.2095-3941.2020.0484</pub-id>
</citation>
</ref>
<ref id="B82">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xiao</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>X. H.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>R. C.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>S. Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>K. F.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>X.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Ubc9 attenuates myocardial ischemic injury through accelerating autophagic flux</article-title>. <source>Front. Pharmacol.</source> <volume>11</volume>, <fpage>561306</fpage>. <pub-id pub-id-type="doi">10.3389/fphar.2020.561306</pub-id>
</citation>
</ref>
<ref id="B83">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xie</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Peng</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Du</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Tan</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Neddylation of PTEN regulates its nuclear import and promotes tumor development</article-title>. <source>Cell Res.</source> <volume>31</volume> (<issue>3</issue>), <fpage>291</fpage>&#x2013;<lpage>311</lpage>. <pub-id pub-id-type="doi">10.1038/s41422-020-00443-z</pub-id>
</citation>
</ref>
<ref id="B84">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xiong</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Cui</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Bi</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>Y.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Neddylation modification of ribosomal protein RPS27L or RPS27 by MDM2 or NEDP1 regulates cancer cell survival</article-title>. <source>Faseb J.</source> <volume>34</volume> (<issue>10</issue>), <fpage>13419</fpage>&#x2013;<lpage>13429</lpage>. <pub-id pub-id-type="doi">10.1096/fj.202000530RRR</pub-id>
</citation>
</ref>
<ref id="B85">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Jin</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Sahay</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Robicsek</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Hepatic neddylation deficiency triggers fatal liver injury via inducing NF-&#x3ba;B-inducing kinase in mice</article-title>. <source>Nat. Commun.</source> <volume>13</volume> (<issue>1</issue>), <fpage>7782</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-022-35525-6</pub-id>
</citation>
</ref>
<ref id="B86">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ye</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Zhuo</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Qin</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Lou</surname>
<given-names>X.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>MEN1 degradation induced by neddylation and the CUL4B-DCAF7 axis promotes pancreatic neuroendocrine tumor progression</article-title>. <source>Cancer Res.</source> <volume>83</volume> (<issue>13</issue>), <fpage>2226</fpage>&#x2013;<lpage>2247</lpage>. <pub-id pub-id-type="doi">10.1158/0008-5472.Can-22-3599</pub-id>
</citation>
</ref>
<ref id="B87">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Deciphering the SUMO code in the kidney</article-title>. <source>J. Cell. Mol. Med.</source> <volume>23</volume> (<issue>2</issue>), <fpage>711</fpage>&#x2013;<lpage>719</lpage>. <pub-id pub-id-type="doi">10.1111/jcmm.14021</pub-id>
</citation>
</ref>
<ref id="B88">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yao</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Liang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zheng</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Neddylation: a versatile pathway takes on chronic liver diseases</article-title>. <source>Front. Med. (Lausanne)</source> <volume>7</volume>, <fpage>586881</fpage>. <pub-id pub-id-type="doi">10.3389/fmed.2020.586881</pub-id>
</citation>
</ref>
<ref id="B89">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yu</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Luo</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Chang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Geng</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Kang</surname>
<given-names>L.</given-names>
</name>
<etal/>
</person-group> (<year>2022a</year>). <article-title>The NEDD8-activating enzyme inhibitor MLN4924 reduces ischemic brain injury in mice</article-title>. <source>Proc. Natl. Acad. Sci. U. S. A.</source> <volume>119</volume> (<issue>6</issue>), <fpage>e2111896119</fpage>. <pub-id pub-id-type="doi">10.1073/pnas.2111896119</pub-id>
</citation>
</ref>
<ref id="B90">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yu</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Bian</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2022b</year>). <article-title>Ginkgolic acid improves bleomycin-induced pulmonary fibrosis by inhibiting SMAD4 SUMOylation</article-title>. <source>Oxid. Med. Cell Longev.</source> <volume>2022</volume>, <fpage>8002566</fpage>. <pub-id pub-id-type="doi">10.1155/2022/8002566</pub-id>
</citation>
</ref>
<ref id="B91">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zeng</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Gu</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Feng</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Xiao</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Feng</surname>
<given-names>X. H.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>ZNF451 stabilizes TWIST2 through SUMOylation and promotes epithelial-mesenchymal transition</article-title>. <source>Am. J. Cancer Res.</source> <volume>11</volume> (<issue>3</issue>), <fpage>898</fpage>&#x2013;<lpage>915</lpage>.</citation>
</ref>
<ref id="B92">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Xia</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Hao</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2024a</year>). <article-title>Ginkgolic acid inhibits the expression of SAE1 and induces ferroptosis to exert an anti-hepatic fibrosis effect</article-title>. <source>Phytomedicine</source> <volume>126</volume>, <fpage>155148</fpage>. <pub-id pub-id-type="doi">10.1016/j.phymed.2023.155148</pub-id>
</citation>
</ref>
<ref id="B93">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname>
<given-names>W. J.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>S. J.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>S. C.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>S. Z.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Inflammasomes and fibrosis</article-title>. <source>Front. Immunol.</source> <volume>12</volume>, <fpage>643149</fpage>. <pub-id pub-id-type="doi">10.3389/fimmu.2021.643149</pub-id>
</citation>
</ref>
<ref id="B94">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Kong</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Liang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>D.</given-names>
</name>
</person-group> (<year>2024b</year>). <article-title>Regulation of vascular remodeling by immune microenvironment after the establishment of autologous arteriovenous fistula in ESRD patients</article-title>. <source>Front. Immunol.</source> <volume>15</volume>, <fpage>1365422</fpage>. <pub-id pub-id-type="doi">10.3389/fimmu.2024.1365422</pub-id>
</citation>
</ref>
<ref id="B95">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhao</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Fan</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Rong</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Upregulation of small ubiquitin-like modifier 2 and protein SUMOylation as a cardioprotective mechanism against myocardial ischemia-reperfusion injury</article-title>. <source>Front. Pharmacol.</source> <volume>12</volume>, <fpage>731980</fpage>. <pub-id pub-id-type="doi">10.3389/fphar.2021.731980</pub-id>
</citation>
</ref>
<ref id="B96">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhao</surname>
<given-names>Y. W.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ding</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Recent development of machine learning methods in sumoylation sites prediction</article-title>. <source>Curr. Med. Chem.</source> <volume>29</volume> (<issue>5</issue>), <fpage>894</fpage>&#x2013;<lpage>907</lpage>. <pub-id pub-id-type="doi">10.2174/0929867328666210915112030</pub-id>
</citation>
</ref>
<ref id="B97">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zheng</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Tang</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>The emerging roles of SUMOylation in pulmonary diseases</article-title>. <source>Mol. Med.</source> <volume>29</volume> (<issue>1</issue>), <fpage>119</fpage>. <pub-id pub-id-type="doi">10.1186/s10020-023-00719-1</pub-id>
</citation>
</ref>
<ref id="B98">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhou</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2020a</year>). <article-title>Cigarette smoke extract stimulates bronchial epithelial cells to undergo a SUMOylation turnover</article-title>. <source>BMC Pulm. Med.</source> <volume>20</volume> (<issue>1</issue>), <fpage>276</fpage>. <pub-id pub-id-type="doi">10.1186/s12890-020-01300-w</pub-id>
</citation>
</ref>
<ref id="B99">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhou</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Cui</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Pan</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>P.</given-names>
</name>
<etal/>
</person-group> (<year>2020b</year>). <article-title>SUMOylation inhibitors synergize with FXR agonists in combating liver fibrosis</article-title>. <source>Nat. Commun.</source> <volume>11</volume> (<issue>1</issue>), <fpage>240</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-019-14138-6</pub-id>
</citation>
</ref>
<ref id="B100">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhou</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Dong</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Gao</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Aziz</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2022a</year>). <article-title>Evaluation of HZX-960, a novel DCN1-UBC12 interaction inhibitor, as a potential antifibrotic compound for liver fibrosis</article-title>. <source>Biochem. Cell. Biol.</source> <volume>100</volume> (<issue>4</issue>), <fpage>309</fpage>&#x2013;<lpage>324</lpage>. <pub-id pub-id-type="doi">10.1139/bcb-2021-0585</pub-id>
</citation>
</ref>
<ref id="B101">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhou</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Zuo</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Cao</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2022b</year>). <article-title>SENP1-Sirt3 signaling promotes &#x3b1;-ketoglutarate production during M2 macrophage polarization</article-title>. <source>Cell Rep.</source> <volume>39</volume> (<issue>2</issue>), <fpage>110660</fpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2022.110660</pub-id>
</citation>
</ref>
<ref id="B102">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhou</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Shen</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Shi</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Wei</surname>
<given-names>Y.</given-names>
</name>
<etal/>
</person-group> (<year>2022c</year>). <article-title>Celastrol targets cullin-associated and neddylation-dissociated 1 to prevent fibroblast-myofibroblast transformation against pulmonary fibrosis</article-title>. <source>ACS Chem. Biol.</source> <volume>17</volume> (<issue>10</issue>), <fpage>2734</fpage>&#x2013;<lpage>2743</lpage>. <pub-id pub-id-type="doi">10.1021/acschembio.2c00099</pub-id>
</citation>
</ref>
<ref id="B103">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhu</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>He</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zuo</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Yue</surname>
<given-names>Z.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>AMPK activation coupling SENP1-Sirt3 axis protects against acute kidney injury</article-title>. <source>Mol. Ther.</source> <volume>31</volume> (<issue>10</issue>), <fpage>3052</fpage>&#x2013;<lpage>3066</lpage>. <pub-id pub-id-type="doi">10.1016/j.ymthe.2023.08.014</pub-id>
</citation>
</ref>
<ref id="B104">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhu</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Liang</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Meng</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Miao</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Chu</surname>
<given-names>C.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>Stabilization of Pin1 by USP34 promotes Ubc9 isomerization and protein sumoylation in glioma stem cells</article-title>. <source>Nat. Commun.</source> <volume>15</volume> (<issue>1</issue>), <fpage>40</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-023-44349-x</pub-id>
</citation>
</ref>
<ref id="B105">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zou</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Ayala</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Dong</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Neddylation is required for perinatal cardiac development through stimulation of metabolic maturation</article-title>. <source>Cell Rep.</source> <volume>42</volume> (<issue>1</issue>), <fpage>112018</fpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2023.112018</pub-id>
</citation>
</ref>
<ref id="B106">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zubiete-Franco</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Fern&#xe1;ndez-Tussy</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Barbier-Torres</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Simon</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Fern&#xe1;ndez-Ramos</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Lopitz-Otsoa</surname>
<given-names>F.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Deregulated neddylation in liver fibrosis</article-title>. <source>Hepatology</source> <volume>65</volume> (<issue>2</issue>), <fpage>694</fpage>&#x2013;<lpage>709</lpage>. <pub-id pub-id-type="doi">10.1002/hep.28933</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>