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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Pharmacol.</journal-id>
<journal-title>Frontiers in Pharmacology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Pharmacol.</abbrev-journal-title>
<issn pub-type="epub">1663-9812</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">1102567</article-id>
<article-id pub-id-type="doi">10.3389/fphar.2023.1102567</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Pharmacology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Rev-erb&#x3b1; agonist SR9009 protects against cerebral ischemic injury through mechanisms involving Nrf2 pathway</article-title>
<alt-title alt-title-type="left-running-head">Sheng et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fphar.2023.1102567">10.3389/fphar.2023.1102567</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Sheng</surname>
<given-names>Mingyue</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff1">
<sup>2</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Xun</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff1">
<sup>2</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Yu</surname>
<given-names>Yan</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff1">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wu</surname>
<given-names>Qi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Kou</surname>
<given-names>Junping</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff1">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/371326/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Chen</surname>
<given-names>Gangling</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff1">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/500324/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Pharmacology of Chinese Materia Medica</institution>, <institution>School of Traditional Chinese Pharmacy</institution>, <institution>China Pharmaceutical University</institution>, <addr-line>Nanjing</addr-line>, <country>China</country>
</aff>
<aff>
<sup>2</sup>
<institution>State Key Laboratory of Natural Products</institution>, <institution>Jiangsu Key Laboratory of TCM Evaluation and Translational Research</institution>, <institution>Department of Complex Prescription of TCM</institution>, <institution>China Pharmaceutical University</institution>, <addr-line>Nanjing</addr-line>, <country>China</country>
</aff>
<aff>
<sup>3</sup>
<institution>State Key Laboratory of Natural Medicines</institution>, <institution>Research Department of Pharmacognosy</institution>, <institution>School of Traditional Chinese Pharmacy</institution>, <institution>China Pharmaceutical University</institution>, <addr-line>Nanjing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/762900/overview">Hui-ling Zhang</ext-link>, Soochow University, China</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1296632/overview">Katsuro Iwase</ext-link>, Chiba University, Japan</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/416230/overview">Thomas Burris</ext-link>, University of Florida, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Gangling Chen, <email>chengangling@cpu.edu.cn</email>; Junping Kou, <email>junpingkou@cpu.edu.cn</email>
</corresp>
<fn fn-type="equal" id="fn1">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this work</p>
</fn>
<fn fn-type="other">
<p>This article was submitted to Experimental Pharmacology and Drug Discovery, a section of the journal Frontiers in Pharmacology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>31</day>
<month>03</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1102567</elocation-id>
<history>
<date date-type="received">
<day>19</day>
<month>11</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>08</day>
<month>02</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Sheng, Chen, Yu, Wu, Kou and Chen.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Sheng, Chen, Yu, Wu, Kou and Chen</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>
<bold>Backgrounds:</bold> The circadian clock protein Rev-erb&#x3b1; is a crucial regulator of circadian rhythms that affects multiple molecular, cellular, and physiology pathways that control susceptibility, injury, and recovery in the neurological disorders. Emerging evidence suggest that Rev-erb&#x3b1; plays a key role in the inflammation and oxidative stress, two pivotal mechanisms in the pathogenesis, progression, and recovery process of ischemic stroke. However, it remains inconclusive whether Rev-erb&#x3b1; activation is protective against ischemic brain damage. Nuclear factor erythroid 2-related factor 2 (Nrf2) pathway, a master regulator of inflammatory and oxidative responses. Our study aimed to determine whether pharmacological activation of Rev-erb&#x3b1; by SR9009 protects against acute ischemic brain damage partly <italic>via</italic> Nrf2 pathway.</p>
<p>
<bold>Methods:</bold> Adult mice were pretreated with SR9009 or Nrf2 inhibitor all-trans-retinoic acid (ATRA) for 3&#xa0;days prior to Sham or middle cerebral artery occlusion (MCAO) operation. After ischemia for 1&#xa0;h and reperfusion for 24&#xa0;h, the neurological function and cerebral infarction volume were determined, superoxide dismutase (SOD) activity, malondialdehyde (MDA) content and glutathione peroxidase (GSH-PX) activity in serum were detected by kit. The mRNA and/or protein level of tumor necrosis factor-&#x3b1; (TNF-&#x3b1;), interleukin-1&#x3b2; (IL-1&#x3b2;), inducible nitric oxide synthase (iNOS), Period (Per)1, Brain and muscle arnt-like1 (Bmal1), Circadian locomotor output cycles kaput (Clock), Rev-erb&#x3b1;, Nrf2, heme oxygenase-1 (HO-1) and quinone oxidoreductase 1 (NQO1) in cerebral cortex were detected by q-PCR and Western blot.</p>
<p>
<bold>Results:</bold> We confirmed that SR9009 activated Rev-erb&#x3b1; gene in the cerebral cortex under basal condition. At 24&#xa0;h after reperfusion, SR9009 ameliorated acute neurological deficits, reduced infarct volume. Meanwhile, the inflammatory TNF-&#x3b1;, IL-1&#x3b2;, iNOS and MDA content levels were significant decreased, SOD and GSH-PX activity were obviously increased, which were markedly blunted (or abolished) by ATRA. SR9009 enhanced the induction of Nrf2 and its downstream target genes HO-1 and NQO1 after ischemic insult. In addition, we found that SR9009 restored Rev-erb&#x3b1;, Bmal1, Clock, Per1 genes expression in the cerebral cortex under ischemic condition.</p>
<p>
<bold>Conclusion:</bold> Taken together, Rev-erb&#x3b1; activation by SR9009 protects against ischemic stroke damage, at least, partly through Nrf2 pathway.</p>
</abstract>
<kwd-group>
<kwd>cerebral ischemia</kwd>
<kwd>SR9009</kwd>
<kwd>REV-erb&#x3b1;</kwd>
<kwd>Nrf2</kwd>
<kwd>circadian rhythm</kwd>
<kwd>circadian gene</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Ischemic stroke is one of the leading causes of mortality and disability worldwide (<xref ref-type="bibr" rid="B48">Virani et al., 2020</xref>). Inflammation (<xref ref-type="bibr" rid="B34">Orellana-Urz&#xfa;a et al., 2020</xref>) and oxidative stress (<xref ref-type="bibr" rid="B15">Franke et al., 2020</xref>) have been widely known as two pivotal mechanisms for multiple neurological disorders, which are particularly important in the development and progression of ischemic pathology. Therefore, targeting these two mechanisms provides a promising new avenue to prevent and treat stroke. The nuclear factor erythroid 2-related factor 2 (Nrf2) has been shown to be a master regulator of inflammation and oxidative stress through diverse cytoprotective and detoxification genes like heme oxygenase-1 (HO-1) and quinone oxidoreductase 1 (NQO1), inducing various endogenous neuroprotective processes (<xref ref-type="bibr" rid="B55">Ya et al., 2018</xref>; <xref ref-type="bibr" rid="B31">Liu et al., 2020</xref>). In recent years, many therapeutic targets for pharmacological intervention have been identified to regulate endogenous neuroprotective mechanisms, which protect the brain from ischemic damage and facilitate its recovery.</p>
<p>Circadian rhythms, linked to various physiological processes, including sleep/wakefulness (<xref ref-type="bibr" rid="B36">Patke et al., 2020</xref>), metabolism (<xref ref-type="bibr" rid="B35">Panda, 2016</xref>), hormone secretion and neurobehavioral processes (<xref ref-type="bibr" rid="B20">Hanifin et al., 2020</xref>) are circa-24-h oscillations in biological processes (<xref ref-type="bibr" rid="B4">Aschoff, 1965</xref>). Most recent studies indicate that the disruptions of the circadian rhythms increase human susceptibility to ischemic stroke (<xref ref-type="bibr" rid="B39">Ramsey et al., 2020</xref>). The core of clock network is composed of circadian genes Brain and muscle arnt-like1 (Bmal1), Circadian locomotor output cycles kaput (Clock), Cryptochrome (Cry)1/2, Period (Per)1/2, Rev-erb&#x3b1;, etc (<xref ref-type="bibr" rid="B32">Mohawk et al., 2012</xref>). Rev-erb&#x3b1; (also known as NR1D1) is a Rev-erb family member and a nuclear hormone receptor (<xref ref-type="bibr" rid="B14">Everett and Lazar, 2014</xref>), which is dominant involved in circadian regulation (<xref ref-type="bibr" rid="B23">Janich et al., 2015</xref>). Rev-erb&#x3b1; is a major transcriptional silencer and a heme-responsive nuclear receptor that can be combined with small molecule agonists and antagonists (<xref ref-type="bibr" rid="B42">Solt et al., 2012</xref>). Recent findings showed that Rev-erb&#x3b1; is crucial in the regulation of inflammation (<xref ref-type="bibr" rid="B19">Griffin et al., 2019</xref>). It was shown that Rev-erb&#x3b1; activation by SR9009, the synthetic ligand for Rev-erbs, inhibited LPS-stimulated transcription of inflammatory factors IL-1&#x3b2;, IL-6, MMP-9 and Ccl2 in astrocytes (<xref ref-type="bibr" rid="B33">Morioka et al., 2019</xref>). SR9009 significantly attenuated hepatic damage and inflammatory responses (<xref ref-type="bibr" rid="B29">Lin et al., 2020a</xref>). SR9009 administration in mice at 1&#xa0;day after myocardial ischemic-reperfusion prevents the heart failure by targeting the cardiac inflammasome (<xref ref-type="bibr" rid="B40">Reitz et al., 2019</xref>). However, the effect of Rev-erb&#x3b1; activation by SR9009 in ischemic stroke has not yet been reported.</p>
<p>Given the background above, in the present study, we aimed to elucidate whether Rev-erb&#x3b1; activation by SR9009 protects against neurological deficits and brain damage in a transient focal cerebral ischemic mouse model and whether the underlying mechanism involves Nrf2 pathways. These findings could contribute to clarifying the role of Rev-erb&#x3b1; activation in ischemic stroke.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and methods</title>
<sec id="s2-1">
<title>Animals and ethics statement</title>
<p>Male adult C57BL/6J mice (Qinglongshan, Nanjing, China) weighing 20&#x2013;25&#xa0;g were used in this research. Mice were housed in a temperature (25&#xb0;C &#xb1; 1&#xb0;C) and 12&#xa0;h light/dark cycle-controlled room (light: 06:00, Zeitgeber time [ZT]0, dark: 18:00, ZT12) for 2&#xa0;weeks (<xref ref-type="bibr" rid="B16">Fredrich et al., 2017</xref>). Food and water were available <italic>ad libitum</italic>. All animal experimental protocols and animal handling procedures were conducted in accordance with the Animal Ethics Committee of China Pharmaceutical University. All efforts were made to minimize animal suffering.</p>
</sec>
<sec id="s2-2">
<title>Experimental transient cerebral ischemia model</title>
<p>Cerebral ischemia was induced by transient focal middle cerebral artery occlusion (MCAO) as described previously (<xref ref-type="bibr" rid="B10">Chen et al., 2020</xref>). Animals were deeply anesthetized with pentobarbital (Shanghai Civi Chemical Technology, Shanghai, China) during surgery. Focal cerebral ischemia was induced by a 6&#x2013;0 nylon monofilament suture, blunted at the tip. The suture was inserted 9-10&#xa0;mm into the internal carotid to occlude the origin of the MCA. An hour later, reperfusion was initiated by withdrawing the monofilament. Body temperature was maintained at 37&#xb0;C by a heat pad during surgery. The sham-operated (Sham) mice were subjected to the same surgery procedure, except that the MCA was not occluded. All MCAO and sham surgeries were performed at ZT0.</p>
</sec>
<sec id="s2-3">
<title>SR9009 administration</title>
<p>SR9009 is the synthetic ligand for Rev-erbs, designed based on the chemical structure of GSK4112 (the first synthetic ligand for Rev-erbs) (<xref ref-type="bibr" rid="B42">Solt et al., 2012</xref>). Either SR9009 (&#x23;orb363935, Biorbyt, Cambridge, England) or the Nrf2 inhibitor all-trans-retinoic acid (ATRA, &#x23;R106320, Aladdin, Shanghai, China) was dissolved in DMSO: Corn oil (5: 95). In experiment 1, mice were randomly divided into two sham groups: vehicle and SR9009 groups (<italic>n</italic> &#x3d; 4 for each group). SR9009 was injected intraperitoneally at doses of 50&#xa0;mg/kg at ZT6 for three consecutive days prior to MCAO (<xref ref-type="bibr" rid="B59">Yuan et al., 2019</xref>). Mice received sham-surgery on forth day. In experiment 2, mice were randomly divided into five groups: Sham, MCAO, SR9009, ATRA and SR9009 &#x2b; ATRA groups (<italic>n</italic> &#x3d; 8 for each group). ATRA was administrated intraperitoneally at doses of 10&#xa0;mg/kg at ZT8 for three consecutive days. Mice in Sham and MCAO groups received equal volumes of vehicle at ZT6 for 3&#xa0;days. Except for the Sham group, mice underwent MCAO surgery on the fourth day (<xref ref-type="fig" rid="F2">Figure 2A</xref>).</p>
</sec>
</sec>
<sec id="s3">
<title>Behavioral testing</title>
<sec id="s3-1">
<title>Neurological deficit score</title>
<p>The overall neurological deficits were evaluated by neurological deficit scoring at 24&#xa0;h after MCAO (<xref ref-type="bibr" rid="B10">Chen et al., 2020</xref>). The mice were placed on the horizontal and wide desktop. Six parameters: body symmetry, gait, climbing, circling behavior, front-limb symmetry, and compulsory circling were employed to observe the physical ability of mice.</p>
</sec>
<sec id="s3-2">
<title>Rotarod test</title>
<p>The motor coordination function was assessed using an accelerating rotarod apparatus (Chengdu Taimeng Software Co., Ltd., Shenzhen, China) (<xref ref-type="bibr" rid="B45">Sunyer et al., 2007</xref>). Mice were trained on the perpendicular to the rod axis, with the head facing opposite direction of the experimenter for three consecutive trials at a slow rotational speed (10&#xa0;rpm/min) for 5&#xa0;min to adapt to the rod on the day before drug administration. At 24&#xa0;h after surgery, the mice were tested with an accelerating rotational speed (from 4 to 40&#xa0;rpm in 5&#xa0;min). The latency to the first fall off the rod was recorded. Each mouse performed 3 trials with 15&#xa0;min intervals. The average values were used for the final analyses.</p>
</sec>
<sec id="s3-3">
<title>Open field test</title>
<p>The spontaneous locomotor activity was assessed by an open field paradigm with an automated tracking system (Chengdu Taimeng Software Co., Ltd., Shenzhen, China). Spontaneous locomotor activity data included the parameters activity number that indicates the travel distance and rearing times that indicate vertical exploratory preference. Each mouse was placed in the groove of the autonomous activity meter for 5&#xa0;min. The chamber was cleaned with 70% ethanol and air dried between tests (<xref ref-type="bibr" rid="B24">Kim et al., 2020</xref>).</p>
</sec>
<sec id="s3-4">
<title>Measurements of infarct volume</title>
<p>The infarct volume was assessed by 2, 3, 5-triphenyltetrazolium chloride (TTC) (<ext-link ext-link-type="uri" xlink:href="https://www.sigmaaldrich.cn/CN/zh/product/sial/17779">17779</ext-link>, Sigma, Missouri, United States) staining at 24&#xa0;h after reperfusion (<xref ref-type="bibr" rid="B10">Chen et al., 2020</xref>). Mice were sacrificed under anesthesia after neurological examination. The frozen brains were sliced into consecutive 1&#xa0;mm coronal sections and immersed in 1% (w/v) TTC solution for 10&#xa0;min at 37&#xb0;C. Normal tissue was stained in red, while the infarct area showed pale gray. Image J software (NIH Image, National Institutes of Health, Bethesda, MD, United States) was applied to measure the infarct size. The percentage of the corrected infarct volume was calculated as: [volume of contralateral hemisphere&#x2014;(volume of ipsilateral hemisphere&#x2013;volume of infarct)/volume of contralateral hemisphere] &#x2a;100.</p>
</sec>
<sec id="s3-5">
<title>Determinations of SOD, GSH, MDA</title>
<p>Mice were anesthetized at 24&#xa0;h after reperfusion, and whole blood samples were collected and stored at room temperature for 30&#xa0;min, then centrifuged at 1,000&#xa0;<italic>g</italic> for 30&#xa0;min. The level of oxidative stress markers superoxide dismutase (SOD), glutathione peroxidase (GSH-PX) activity and malondialdehyde (MDA) content in serum were detected using SOD kit (A001-3), MDA kit (A003-1), GSH kit (A005) according to manufacturer&#x2019;s instructions (Nanjing Jiancheng Bioengineering Institute, Nanjing, China).</p>
</sec>
<sec id="s3-6">
<title>q-PCR</title>
<p>The total RNA for the penumbra of ischemic cortex was extracted using TRIzol reagent (R0016, Beyotime, Shanghai, China). Nano (NANO-400, Shanghai, China) was used to quantify the concentration of RNA sample at 260/280&#xa0;nm, and the samples with 1.8 &#x3c; A260/280 &#x3c; 2.0 were selected for further experiment to ensure RNA quality. cDNA was transcribed using HiScript II Q RT SuperMix for qPCR (&#x2b;<italic>g</italic> DNA wiper) Kit (R223-01, Vazyme, Nanjing, China) to transcribe cDNA from 1.0&#xa0;&#x3bc;g RNA. Use ABI QuantStudio 3 real-time PCR detection system (Thermo Fisher Scientific, United States) and ChamQ SYBR qPCR Master Mix (Low ROX Premixed) (Q331-02, Vazyme, Nanjing, China) for q-PCR analysis. The thermal cycling parameters were as follows: after preincubation for 30&#xa0;s at 94&#xb0;C, 40 cycles of amplification (95&#xb0;C for 10&#xa0;s, 60&#xb0;C for 1&#xa0;min) were performed. GAPDH was used as an internal control. The expression level of target gene was normalized to the expression level of GAPDH using the 2<sup>&#x2212;&#x394;&#x394;Ct</sup> method (Ct &#x3d; Threshold Cycle). The primer sequences were shown in <xref ref-type="table" rid="T1">Table 1</xref>.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Primer sequences for qPCR.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Primer name</th>
<th align="left">Forward primer (5&#x2032;&#x2013;3&#x2032;)</th>
<th align="left">Reverse primer (5&#x2032;&#x2013;3&#x2032;)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Per1</td>
<td align="left">CAG&#x200b;CCG&#x200b;TGC&#x200b;TGC&#x200b;CTA&#x200b;CTC&#x200b;ATT</td>
<td align="left">AGA&#x200b;GGC&#x200b;AGT&#x200b;TGG&#x200b;TGT&#x200b;GTG&#x200b;TC</td>
</tr>
<tr>
<td align="left">Clock</td>
<td align="left">CCT&#x200b;ATC&#x200b;CTA&#x200b;CCT&#x200b;TCG&#x200b;CCA&#x200b;CAC&#x200b;A</td>
<td align="left">TCC&#x200b;CGT&#x200b;GGA&#x200b;GCA&#x200b;ACC&#x200b;TAG&#x200b;AT</td>
</tr>
<tr>
<td align="left">Bmal1</td>
<td align="left">CCA&#x200b;AGA&#x200b;AAG&#x200b;TAT&#x200b;GGA&#x200b;CAC&#x200b;AGC&#x200b;AAA</td>
<td align="left">GCA&#x200b;TTC&#x200b;TTG&#x200b;ATC&#x200b;CTT&#x200b;CCT&#x200b;TGG&#x200b;T</td>
</tr>
<tr>
<td align="left">Rev-erb&#x3b1;</td>
<td align="left">CCC&#x200b;TGG&#x200b;ACT&#x200b;CCA&#x200b;ATA&#x200b;ACA&#x200b;ACA&#x200b;CA</td>
<td align="left">GCC&#x200b;ATT&#x200b;GGA&#x200b;GCT&#x200b;GTC&#x200b;ACT&#x200b;GTA&#x200b;G</td>
</tr>
<tr>
<td align="left">Nrf2</td>
<td align="left">ATG&#x200b;ATG&#x200b;GAC&#x200b;TTG&#x200b;GAG&#x200b;TTG&#x200b;CC</td>
<td align="left">TCC&#x200b;TGT&#x200b;TCC&#x200b;TTC&#x200b;TGG&#x200b;AGT&#x200b;TG</td>
</tr>
<tr>
<td align="left">HO-1</td>
<td align="left">ATG&#x200b;TGG&#x200b;CCC&#x200b;TGG&#x200b;AGG&#x200b;AGG&#x200b;AGA</td>
<td align="left">CGC&#x200b;TGC&#x200b;ATG&#x200b;GCT&#x200b;GGT&#x200b;GTG&#x200b;TAG</td>
</tr>
<tr>
<td align="left">NQO1</td>
<td align="left">TTT&#x200b;AGG&#x200b;GTC&#x200b;GTC&#x200b;TTG&#x200b;GCA&#x200b;AC</td>
<td align="left">GTC&#x200b;TTC&#x200b;TCT&#x200b;GAA&#x200b;TGG&#x200b;GCC&#x200b;AG</td>
</tr>
<tr>
<td align="left">TNF-&#x3b1;</td>
<td align="left">CCT&#x200b;GTA&#x200b;GCC&#x200b;CAC&#x200b;GTC&#x200b;GTA&#x200b;G</td>
<td align="left">GTC&#x200b;TTC&#x200b;TCT&#x200b;GAA&#x200b;TGG&#x200b;GCC&#x200b;AG</td>
</tr>
<tr>
<td align="left">IL-1&#x3b2;</td>
<td align="left">GAA&#x200b;ATG&#x200b;CCA&#x200b;CCT&#x200b;TTT&#x200b;GAC&#x200b;AGT&#x200b;G</td>
<td align="left">TGG&#x200b;ATG&#x200b;CTC&#x200b;TCA&#x200b;TCA&#x200b;GGA&#x200b;CAG</td>
</tr>
<tr>
<td align="left">iNOS</td>
<td align="left">CGG&#x200b;ATA&#x200b;GGC&#x200b;AGA&#x200b;GAT&#x200b;TGG&#x200b;AG</td>
<td align="left">GTG&#x200b;GGG&#x200b;TTG&#x200b;TTG&#x200b;CTG&#x200b;AAC&#x200b;TT</td>
</tr>
<tr>
<td align="left">GAPDH</td>
<td align="left">AAA&#x200b;TGG&#x200b;TGA&#x200b;AGG&#x200b;TCG&#x200b;GTG&#x200b;TGA&#x200b;AC</td>
<td align="left">CAA&#x200b;CAA&#x200b;TCT&#x200b;CCA&#x200b;CTT&#x200b;TGC&#x200b;CAC&#x200b;TG</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s3-7">
<title>Western blot</title>
<p>Protein extractions in the penumbra of ischemic cortex were obtained using a total protein extraction kit (FD009, FDbio, Hangzhou, China) following the manufacturer&#x2019;s protocols. Then the BCA Protein Assay Kit (AR1189, BOSTER, California, United States) was used to determine the protein concentration. Loaded an equal amount of protein sample on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and then electrotransferred onto PVDF membrane. The membrane was blocked with 5% skimmed milk powder in Tris buffered saline and incubated with anti-PER1 (A8449, ABclonal, Boston, United States, 1:1,000), anti-BMAL1 (A17334, ABclonal, Boston, United States, 1:850), anti-CLOCK (A5633, ABclonal, Boston, United States, 1:1,000), anti-NR1D1 (BM5531, BOSTER, California, United States, 1:350), anti-NRF2 (PB9290, BOSTER, California, United States, 1:1,000), anti-HO-1 (A1346, ABclonal, Boston, United States, 1:1,000), anti-NQO1 (A0047, ABclonal, Boston, United States, 1:1,000) overnight at 4&#xb0;C. The membrane was then incubated with the HRP-conjugated Streptavidin (BS10044, Bioworld, Minnesota, United States) for 2&#xa0;h at 37&#xb0;C and detected using an enhanced chemiluminescence (E412-01, Vazyme, Nanjing, China). Image analysis software was used to analyze the optical density of the protein bands. These values were normalized to the GAPDH content and expressed as relative intensity.</p>
</sec>
<sec id="s3-8">
<title>Statistical analysis</title>
<p>All data was statistically analyzed by using GraphPad Prism 8.0 software (GraphPad software, Inc., La Jolla, CA, United States). Results were expressed as mean &#xb1; SEM. Student&#x2019;s <italic>t</italic>-test was used for the comparison between the two groups. One-way ANOVA analysis was used for the comparison of three or more groups, followed by using Dunnett&#x2019;s test, <italic>p</italic> &#x3c; 0.05 was considered to be statistically significant.</p>
</sec>
</sec>
<sec sec-type="results" id="s4">
<title>Results</title>
<sec id="s4-1">
<title>SR9009 activates Rev-erb&#x3b1; in cerebral cortex of mice</title>
<p>To confirm whether SR9009 activates Rev-erb&#x3b1; in the brain, adult naive C57BL/6J mice received treatment with either SR9009 or vehicle for 3 days prior to sham surgery, and the Rev-erb&#x3b1; activation was estimated by western blot and q-PCR at 24&#xa0;h after sham-surgery. The activation of Rev-erb&#x3b1; was reflected by Bmal1 and Clock protein expression levels which is controlled in a Rev-erb&#x2013;dependent manner (<xref ref-type="bibr" rid="B32">Mohawk et al., 2012</xref>). As shown in <xref ref-type="fig" rid="F1">Figure 1</xref>, western blot and q-PCR results revealed that SR9009 markedly decreased the genes and proteins levels of Bmal1 and Clock compared with vehicle controls (<italic>p</italic> &#x3c; 0.001). Together, these data suggest the activation of Rev-erb&#x3b1; in the cerebral cortex of mice by SR9009 treatment.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Pharmacological activation of Rev-erb&#x3b1; by SR9009. Male mice (C57BL/6J) received a once-daily injection of either SR9009 (50&#xa0;mg/kg; i.p.) or vehicle during the morning hours (12:00 a.m., ZT6) for 3&#xa0;days prior to sham-surgery. The activation of Rev-erb&#x3b1; in the cerebral cortex was examined 24&#xa0;h after sham-surgery, indicated by the mRNA <bold>(A,B)</bold> and protein <bold>(C,D)</bold> expression levels of Bmal1 and Clock. Compared to vehicle controls, Real-time PCR and Western blot analysis revealed that SR9009 induced dramatic reduction in both mRNA and protein levels of Bmal1 and Clock. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 3. <sup>&#x2a;</sup>
<italic>p</italic> &#x3c; 0.05, <sup>&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.01, <sup>&#x2a;&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.001.</p>
</caption>
<graphic xlink:href="fphar-14-1102567-g001.tif"/>
</fig>
</sec>
<sec id="s4-2">
<title>Rev-erb&#x3b1; activation by SR9009 ameliorates neurological deficits after ischemic stroke</title>
<p>To test whether SR9009 is protective against ischemic injury, multiple neurobehavioral and histological outcomes were evaluated at 24&#xa0;h after MCAO. It is shown that SR9009 significantly reduced the ischemia-induced neurological deficits, indicated by the reduced neurological deficit score (<italic>p</italic> &#x3c; 0.001) (<xref ref-type="fig" rid="F2">Figure 2B</xref>). Meanwhile, the motor function decline following MCAO was ameliorated by SR9009, which was revealed by the latency to fall in the rotarod test (<xref ref-type="fig" rid="F2">Figure 2C</xref>). SR9009 also exhibited obvious protective effect in the ischemia-induced reduction of spontaneous locomotor activity, reflected by the locomotor activity number and the rearing times in the open field test (<xref ref-type="fig" rid="F2">Figure 2D</xref>). Interestingly, the Nrf2 inhibitor ATRA treatment exacerbated the neurological deficits in the behavior tests above. In contrast, such protective effects of SR9009 in the functional marker above were significantly reduced when administered with the Nrf2 inhibitor ARTA, suggesting the underlying mechanisms might involve Nrf2 pathway. We also further determined whether SR9009 could affect spontaneous locomotor activity and locomotor activity under basal condition. As expected, no significant difference was observed between groups in the rotarod (<xref ref-type="fig" rid="F2">Figure 2E</xref>) and the open field tests (<xref ref-type="fig" rid="F2">Figure 2F</xref>). Together, these findings support the functional protection of SR9009 on ischemic stroke injury.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>The Rev-erb&#x3b1; activation by SR9009 attenuates ischemia-induced acute neurological deficits. <bold>(A)</bold> Experimental design. 6:00 a.m. (ZT0) as the beginning of the light phase, and 18:00 a.m. (ZT12) as the start of the dark phase. Male mice (C57BL/6J) were pre-treated with SR9009 (50&#xa0;mg/kg, i.p.), ATRA (10&#xa0;mg/kg, i.p.), ATRA &#x2b; SR9009 (i.p.), or vehicle for 3&#xa0;days and then subjected to MCAO surgery. At 24&#xa0;h after MCAO, SR9009 significantly reduced the neurological deficits score <bold>(B)</bold>, increased the fall latency in the rotarod test <bold>(C)</bold>, and reduced the locomotor activity numbers and rearing times in the open field paradigm <bold>(D)</bold>. Nrf2 inhibitor ATRA eliminated the protective effect of SR9009. No significant differences were detected between Vehicle group and Vehicle add SR9009 groups in the rotarod and the open field tests <bold>(E,F)</bold>. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 6&#x2013;8. <sup>&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.01, <sup>&#x2a;&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.001.</p>
</caption>
<graphic xlink:href="fphar-14-1102567-g002.tif"/>
</fig>
</sec>
<sec id="s4-3">
<title>REV-erb&#x3b1; activation by SR9009 reduces the infarct volume after ischemic stroke</title>
<p>To investigate the influence of SR9009 on the cerebral infarction in mice with MCAO, TTC staining was performed at 24&#xa0;h after MCAO. As indicated in <xref ref-type="fig" rid="F3">Figure 3</xref>, SR9009 treatment remarkedly decreased the ischemia-induced infarct volume (<italic>p</italic> &#x3c; 0.01) and ATRA increased the infarct volume (<italic>p</italic> &#x3c; 0.01). Nevertheless, ATRA combined with SR9009 treatment increased the infarct volume compared with SR9009 group (<italic>p</italic> &#x3c; 0.05). This suggests that protection of SR9009 against ischemic stroke injury is blunted with ATRA.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>The Rev-erb&#x3b1; activation by SR9009 reduces the infarct volume after ischemic stroke. The effect of SR9009 pretreatment on infarct volume 24&#xa0;h after ischemic stroke was determined by TTC staining. The representative photograph <bold>(A)</bold> and quantification <bold>(B)</bold> of infarct volume in serial coronal sections showed that SR9009 markedly reduced the infarct volume compared with MCAO controls. In contrast, when administered with Nrf2 inhibitor ATRA, the protective effect of SR9009 was eliminated. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 4-5. <sup>&#x2a;</sup>
<italic>p</italic> &#x3c; 0.05, <sup>&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.01.</p>
</caption>
<graphic xlink:href="fphar-14-1102567-g003.tif"/>
</fig>
</sec>
<sec id="s4-4">
<title>SR9009 reduces inflammatory and oxidative damage following ischemic stroke</title>
<p>To evaluate whether SR9009 protects against the inflammatory and oxidative damage in the ischemic stroke, multiple inflammatory mediators including TNF&#x3b1;, IL-1&#x3b2; and iNOS (<xref ref-type="fig" rid="F4">Figures 4A&#x2013;C</xref>) in the ischemic cortex were detected at 24&#xa0;h after MCAO. It is showed that the mRNA expression levels of TNF&#x3b1;, IL-1&#x3b2; and iNOS in the MCAO model group were upregulated, which was significantly reduced by SR9009. Particularly, when administered with the Nrf2 inhibitor ATRA, SR9009 did not attenuate the expression levels of the markers above. Together, we measured SOD, GSH-PX activity and MDA levels (<xref ref-type="fig" rid="F4">Figures 4D&#x2013;F</xref>) in serum to determine whether SR9009 attenuated oxidative damage in mice induced to ischemic injury. SOD and GSH-PX activity levels were decreased in serum (<italic>p</italic> &#x3c; 0.05), whereas MDA content increased (<italic>p</italic> &#x3c; 0.05), when compared with levels in the Sham group. SR9009-treated mice displayed significantly higher activity of SOD (<italic>p</italic> &#x3c; 0.01) and lower serum concentration of MDA (<italic>p</italic> &#x3c; 0.01), than did vehicle-treated mice.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>SR9009 reduces ischemia-induced inflammatory and oxidative damage in a Nrf2-dependent manner. The effect of SR9009 on neuroinflammation following ischemia was evaluated by measuring the mRNA levels of inflammatory mediators TNF&#x3b1;, IL-1&#x3b2; and iNOS in the ischemic cortex at 24&#xa0;h after MCAO <bold>(A&#x2013;C)</bold>. Compared to Sham controls, ischemic injury evoked prominent upregulation in above markers. SR9009 significantly downregulated the expression of pro-inflammatory mediator TNF&#x3b1;, IL-1&#x3b2; and iNOS after MCAO. In contrast, Nrf2 inhibitor exacerbated the neuroinflammation induced by ischemic injury indicated by the increase of TNF&#x3b1;, IL-1&#x3b2; and iNOS at mRNA levels. ATRA reduced the protective effect of SR9009 on inflammation. The oxidative parameters SOD activity, MDA content and GSH-PX activity in serum <bold>(D&#x2013;F)</bold>. Similar effects were also shown in the oxidative parameters. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 8. <sup>&#x2a;</sup>
<italic>p</italic> &#x3c; 0.05, <sup>&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.01, <sup>&#x2a;&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.001.</p>
</caption>
<graphic xlink:href="fphar-14-1102567-g004.tif"/>
</fig>
</sec>
<sec id="s4-5">
<title>SR9009 enhances Nrf2 and downstream cytoprotective proteins levels</title>
<p>To evaluate whether the underlying mechanisms of SR9009 involves Nrf2 pathway, the mRNA (<xref ref-type="fig" rid="F5">Figures 5A&#x2013;C</xref>) and protein (<xref ref-type="fig" rid="F5">Figures 5D&#x2013;F</xref>) levels of Nrf2 and its target genes HO-1 and NQO1 in the ischemic cortex were measured at 24&#xa0;h after MCAO. Indeed, qPCR analysis indicated that, compared with MCAO controls, SR9009 treatment significantly increased the mRNA and protein levels of Nrf2, HO-1 and NQO1. Not surprisingly, no significant difference was detected in the expression of gene and protein levels above between the ATRA and MCAO groups (<italic>p</italic> &#x3e; 0.05). The Nrf2 inhibition by ATRA significantly abolished the effect of SR9009 on the markers above, indicating the possible involvement of Nrf2 in the protective mechanisms of SR9009. Together, these findings suggest the underlying neuroprotective mechanisms might involve the activation of Nrf2 pathway.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>SR9009 improves the expression levels of Nrf2 and its target cytoprotective proteins after ischemia. The mRNA of Nrf2, HO-1 and NQO1 in the ischemic cerebral cortex 24&#xa0;h after MCAO <bold>(A&#x2013;C)</bold>. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 3. The protein of Nrf2, HO-1 and NQO1 in the ischemic cerebral cortex 24&#xa0;h after MCAO <bold>(D&#x2013;F)</bold>. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 6. <sup>&#x2a;</sup>
<italic>p</italic> &#x3c; 0.05, <sup>&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.01, <sup>&#x2a;&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.001. It was shown that ischemic injury led to significant downregulation of Nrf2 and its target cytoprotective genes expression at both mRNA and protein levels, while SR9009 remarkably attenuated such reduction. Strikingly, the SR9009 effect was abolished when administered with ATRA.</p>
</caption>
<graphic xlink:href="fphar-14-1102567-g005.tif"/>
</fig>
</sec>
<sec id="s4-6">
<title>SR9009 restores circadian genes expression in the ischemic cerebral cortex of mice</title>
<p>To confirm the expression levels of circadian clock genes during ischemic stroke and determine whether SR9009 affects circadian clock in the ischemic cortex of mice, the gene (<xref ref-type="fig" rid="F6">Figures 6A&#x2013;D</xref>) and protein (<xref ref-type="fig" rid="F6">Figures 6E&#x2013;H</xref>) expression levels of Rev-erb&#x3b1;, Bmal1, Clock and Per1 were investigated at 24&#xa0;h after MCAO. Compared to Sham control group, MCAO group showed a marked reduction in the mRNA and protein levels of Rev-erb&#x3b1;, Bmal 1, Clock and Per1. SR9009 treatment significantly attenuated the decline in these markers following ischemia, while these effects of SR9009 were dramatically abolished when administered with Nrf2 inhibitor ATRA. Meanwhile, no significant difference was observed in these markers between MCAO and ATRA groups. Together, these results indicated that ischemia led to decline of Rev-erb&#x3b1;, Bmal1, Clock and Per1 expression levels, while SR9009 essentially attenuated such alteration.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>The effects of SR9009 on circadian gene and component protein expressions in the ischemic cortex. The mRNA of Rev-erb&#x3b1;, Clock, Bmal 1 and Per1 in the ischemic cerebral cortex 24&#xa0;h after MCAO <bold>(A&#x2013;D)</bold>. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 3. The protein of Rev-erb&#x3b1;, Clock, Bmal1 and Per1 in the ischemic cerebral cortex 24&#xa0;h after MCAO <bold>(E&#x2013;H)</bold>. Data are expressed as mean &#xb1; SEM, <italic>n</italic> &#x3d; 6. <sup>&#x2a;</sup>
<italic>p</italic> &#x3c; 0.05, <sup>&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.01, <sup>&#x2a;&#x2a;&#x2a;</sup>
<italic>p</italic> &#x3c; 0.001. It was shown that ischemic injury led to significant downregulation of circadian genes expression at both mRNA and protein levels, while SR9009 remarkably attenuated such reduction. Strikingly, the SR9009 effects were partly abolished when administered with ATRA.</p>
</caption>
<graphic xlink:href="fphar-14-1102567-g006.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="s5">
<title>Discussion</title>
<p>In the present study, we found the neuroprotective effects of SR9009 in a stroke model and provided a novel mechanism. SR9009 could improve nervous deficit symptoms of mice with the MCAO and reduce the brain infarct volume. It needs to be further revealed that SR9009 did not improve the rearing movement, which is a parameter of motor behavior related to exploratory activity (<xref ref-type="bibr" rid="B46">Thiel et al., 1999</xref>; <xref ref-type="bibr" rid="B13">Crusio, 2001</xref>). In addition, SR9009 could inhibit the overproduction of inflammatory cytokines, increase SOD and GSH-PX activities levels and reduce MDA levels in serum of mice exposed to MCAO. SR9009 shows excellent antioxidant activities <italic>via</italic> up-regulating the antioxidant gene expression of Nrf2 and HO-1. Administration of SR9009 could restore the expression of circadian genes in cerebral cortex of mice.</p>
<p>Rev-erb&#x3b1; is one of the attractive targets in the neurological disorder field in recent years. It is widely expressed in the organs and tissues and is closely associated to inflammation (<xref ref-type="bibr" rid="B19">Griffin et al., 2019</xref>), metabolism (<xref ref-type="bibr" rid="B18">Ghoshal et al., 2018</xref>; <xref ref-type="bibr" rid="B59">Yuan et al., 2019</xref>), tumor (<xref ref-type="bibr" rid="B44">Sulli et al., 2018</xref>) and Alzheimer&#x2019;s disease (<xref ref-type="bibr" rid="B41">Roby et al., 2019</xref>; <xref ref-type="bibr" rid="B28">Lee et al., 2020</xref>). Its direct targeted genes except <italic>Bmal1</italic> and <italic>Clock</italic> (<xref ref-type="bibr" rid="B11">Crumbley and Burris, 2011</xref>), include transcription repressors e4bp4 (<xref ref-type="bibr" rid="B60">Zhang et al., 2021</xref>), NPAS2 (<xref ref-type="bibr" rid="B12">Crumbley et al., 2010</xref>), NLRP3 (<xref ref-type="bibr" rid="B38">Pourcet et al., 2018</xref>; <xref ref-type="bibr" rid="B52">Wang et al., 2018</xref>), etc. SR9009, an agonist of Rev-erb&#x3b1;, is highly fat-soluble and is able to penetrate the blood-brain barrier (<xref ref-type="bibr" rid="B51">Wang et al., 2020</xref>). It plays an agonistic effect by increasing the recruitment of recruiting co-repressors nuclear receptor co-repressor 1 (NCOR1) and histone deacetylase 3 (HDAC3) (<xref ref-type="bibr" rid="B51">Wang et al., 2020</xref>). The circadian rhythm of mice and the expression of circadian genes can be disrupted by the occurrence of ischemic stroke (<xref ref-type="bibr" rid="B5">Beker et al., 2018</xref>), including <italic>Rev-erb&#x3b1;</italic>, <italic>Per1</italic>, <italic>Clock</italic> and <italic>Bmal1</italic>. In our study, we found that cerebral ischemia induced decreased expression of circadian genes, including Rev-erb&#x3b1;.</p>
<p>Ischemic stroke onset occurs more frequently in the first 2&#xa0;h in the morning (<xref ref-type="bibr" rid="B37">Peter-Derex and Derex, 2019</xref>), which was reported to have a significant influence on the infarct size (<xref ref-type="bibr" rid="B47">Vinall et al., 2000</xref>). Our preliminary data showed that the most severe brain infarct size was observed at ZT0 while the minimized sized was found at ZT18. This phenomenon may be related to circadian fluctuations in sleep/wakefulness (<xref ref-type="bibr" rid="B9">Chellappa et al., 2019</xref>), heart rate (<xref ref-type="bibr" rid="B25">Kodama et al., 2018</xref>), blood pressure (<xref ref-type="bibr" rid="B17">G&#x105;secki et al., 2020</xref>), platelet aggregation (<xref ref-type="bibr" rid="B27">Kubota et al., 1987</xref>). Therefore, ZT0 is chosen for MCAO operation in our study. Considering that the peak of Rev-erb&#x3b1; protein expression is ZT6 (i.e. 12:00) in the cortex and hippocampus brain regions (<xref ref-type="bibr" rid="B60">Zhang et al., 2021</xref>), ZT6 was chosen for the SR9009 administration in this study (<xref ref-type="bibr" rid="B3">Amador et al., 2016</xref>). We validated that SR9009 essentially activated Rev-erb&#x3b1;. SR9009 could ameliorate brain infarction and improve nerve function. Pharmacological activation of Rev-erb&#x3b1; mitigate damages following ischemia reperfusion injury, including reduction of cerebral infarct volume and prevention of neurological injury. Circadian genes are closely related to cardiovascular and cerebrovascular diseases. Rev-erb&#x3b1; gene knockout mice displayed progressive dilated cardiomyopathy and lethal heart failure (<xref ref-type="bibr" rid="B43">Song et al., 2022</xref>). Mice with endothelial cell-specific Bmal1 gene knockout lose sensitivity to the circadian changes of thrombotic vascular obstruction (<xref ref-type="bibr" rid="B7">Bhatwadekar et al., 2017</xref>). Per1 gene knockout mice are more prone to neuronal cell death after ischemic injury in hippocampus (<xref ref-type="bibr" rid="B53">Wiebking et al., 2013</xref>). The mean arterial pressure and heart rate circadian phase of clock mutant mice were significantly delayed (<xref ref-type="bibr" rid="B1">Alibhai et al., 2014</xref>). Therefore, protection against the decline of circadian genes may also be a therapeutic direction in cerebral ischemic injury.</p>
<p>Nrf2 has a powerful anti-inflammatory activity mediated <italic>via</italic> modulating NF-&#x3ba;B (<xref ref-type="bibr" rid="B21">Hassanein et al., 2020</xref>) and NLRP3 (<xref ref-type="bibr" rid="B30">Lin et al., 2020b</xref>). We found SR9009 mitigated the excessive release of the cytokines TNF-&#x3b1;, IL-1&#x3b2; and iNOS, while ATRA blunted the effect, suggesting a link between Nrf2 and inflammation. Nrf2 nuclear translocation augments expression of antioxidant-response elements HO-1 and NQO1. HO-1 is induced by a variety of conditions associated with oxidative stress. After stroke, the oxidative stress plays a key role in the pathophysiology of the ischemic brain (<xref ref-type="bibr" rid="B34">Orellana-Urz&#xfa;a et al., 2020</xref>). We used ATRA, which inhibit Nrf2 activation <italic>via</italic> activating the RAR&#x3b1;-Nrf2 complex in the present study (<xref ref-type="bibr" rid="B2">Alvi et al., 2022</xref>; <xref ref-type="bibr" rid="B50">Wang L et al., 2022</xref>). The protective effect of SR9009 decreased when administered with ATRA. Manifested in inflexible behavior and increased cerebral infarction area, suggesting that Nrf2 pathway contributes to protective effects of SR9009 against ischemic injury.</p>
<p>
<xref ref-type="bibr" rid="B56">Yang et al. (2013)</xref>. Investigated that inflammatory stimulation attenuates Rev-erb&#x3b1; promoter activity and expression. It is speculated that inflammation driven by ischemia reperfusion may attack the circadian clock, because inflammatory cytokines (such as TNF-&#x3b1; and IL-1&#x3b2;) are modifications of circadian genes, such as Bmal1 (<xref ref-type="bibr" rid="B58">Yoshida et al., 2018</xref>) and Per2 (<xref ref-type="bibr" rid="B8">Cavadini et al., 2007</xref>; <xref ref-type="bibr" rid="B57">Yoshida et al., 2013</xref>). In addition, the experimental results showed that the application of SR9009 promoted the normal expression of Per1, Bmal1, Clock and Rev-erb&#x3b1; in ischemic cortex. SR9009 may have an effect on the expression of Bmal1 and Clock gene and protein in cerebral ischemia mice independent of Rev-erb&#x3b1;. For example, Wu <italic>et al.</italic> revealed there is a crosstalk between key hypoxia signaling molecule HIF1A and Bmal1 (<xref ref-type="bibr" rid="B54">Wu et al., 2016</xref>). Thus, we may use Rev-erb&#x3b1; knockout mice to reveal the role of Rev-erb&#x3b1; in ischemic stroke in further study. Rev-erb&#x3b1; is generally characterized as being unable to activate downstream genes without the activated functional region 2 (AF2) region, which is necessary for transcriptional activation. The Rev-erb&#x3b1; is constitutive repressor of transcription owing to recruitment of transcriptional co-repressor proteins (<xref ref-type="bibr" rid="B26">Kojetin and Burris, 2014</xref>; <xref ref-type="bibr" rid="B60">Zhang et al., 2021</xref>). Therefore, Rev-erb&#x3b1; may achieve the positive regulation of Nrf2 through other transcription repressors, such as retinoic X receptor alpha (RXR&#x3b1;), which specifically inhibits Nrf2 activity (<xref ref-type="bibr" rid="B49">Wang et al., 2013</xref>). In addition, the regulatory mechanism of the ischemic attack controlled by the biological clock is still unclear and how the cerebral ischemia regulate Rev-erb&#x3b1; remains largely unresolved.</p>
<p>Further study is needed to demonstrate the involvement of Rev-erb&#x3b1; in the protective effects of cerebral ischemia by Rev-erb&#x3b1; deficient mice and focus on verifying the relationship between Rev-erb&#x3b1; and Nrf2, particularly through the use of Rev-erb&#x3b1; knockout mice. SR9009 is a dual Rev-erb agonist (Rev-erb&#x3b1; and Rev-erb&#x3b2;) and we cannot totally rule out effects on Rev-erb&#x3b2; receptor. Nevertheless, both nuclear receptors have overlapping functions, thereby sharing many same target genes. Moreover, other pathways involved in this process and future studies might address this possibility and the activity of Nrf2 and Keap1 remain to be determined (<xref ref-type="bibr" rid="B6">Bellezza et al., 2018</xref>; <xref ref-type="bibr" rid="B22">He et al., 2020</xref>). These results will provide a better understanding of the role of Rev-erb&#x3b1; and promote the development of drugs that target ligand-regulated nuclear receptors in cerebral ischemia.</p>
</sec>
<sec sec-type="conclusion" id="s6">
<title>Conclusion</title>
<p>Taken together, we presented that Rev-erb&#x3b1; activation by SR9009 protects against acute ischemic brain damage and attenuated inflammatory and oxidative stress, and the underlying mechanism may involve Nrf2 pathway activation. These findings contribute to our understanding of the role of Rev-erb&#x3b1; activation in ischemic stroke.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s7">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/supplementary materials, further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec id="s8">
<title>Ethics statement</title>
<p>The animal study was reviewed and approved by Animal Ethics Committee of China Pharmaceutical University.</p>
</sec>
<sec id="s9">
<title>Author contributions</title>
<p>MS, XC, and YY performed experiments. MS wrote the paper. MS and XC collected and analyzed data. GC and MS designed the study. JK and GC provided the funding supports. QW, JK, and GC provided resources support. All authors analyzed the results and approved the final version of the manuscript.</p>
</sec>
<sec id="s10">
<title>Funding</title>
<p>This research was funded by National Natural Science Foundation of China (No. 81503284), the &#x201c;Double First-Class&#x201d; University project (CPU2018GF06, CPU2018GF07).</p>
</sec>
<ack>
<p>The authors are grateful to Prof. Bo-Yang Yu for the excellent technical assistance and to Dr. Lei Liu for English polishing and editing.</p>
</ack>
<sec sec-type="COI-statement" id="s11">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s12">
<title>Publisher&#x2019;s note</title>
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