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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Pharmacol.</journal-id>
<journal-title>Frontiers in Pharmacology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Pharmacol.</abbrev-journal-title>
<issn pub-type="epub">1663-9812</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">782199</article-id>
<article-id pub-id-type="doi">10.3389/fphar.2022.782199</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Pharmacology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Aryl Hydrocarbon Receptor Mechanisms Affecting Chronic Kidney Disease</article-title>
<alt-title alt-title-type="left-running-head">Curran and Kopp</alt-title>
<alt-title alt-title-type="right-running-head">Aryl Hydrocarbon Receptor in CKD</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Curran</surname>
<given-names>Colleen S.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/992214/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kopp</surname>
<given-names>Jeffrey B.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Critical Care Medicine Department</institution>, <institution>Clinical Center</institution>, <institution>NIH</institution>, <addr-line>Bethesda</addr-line>, <addr-line>MD</addr-line>, <country>United&#x20;States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Kidney Disease Section</institution>, <institution>NIDDK</institution>, <institution>NIH</institution>, <addr-line>Bethesda</addr-line>, <addr-line>MD</addr-line>, <country>United&#x20;States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/18996/overview">Matthew Griffin</ext-link>, National University of Ireland Galway, Ireland</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/968873/overview">Naoka Murakami</ext-link>, Brigham and Women&#x2019;s Hospital and Harvard Medical School, United&#x20;States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/557874/overview">Xiaoxin Wang</ext-link>, Georgetown University Medical Center, United&#x20;States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Colleen S. Curran, <email>colleen.curran@nih.gov</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Renal Pharmacology, a section of the journal Frontiers in Pharmacology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>14</day>
<month>02</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>13</volume>
<elocation-id>782199</elocation-id>
<history>
<date date-type="received">
<day>24</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>14</day>
<month>01</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Curran and Kopp.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Curran and Kopp</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>The aryl hydrocarbon receptor (AHR) is a basic helix-loop-helix transcription factor that binds diverse endogenous and xenobiotic ligands, which regulate AHR stability, transcriptional activity, and cell signaling. AHR activity is strongly implicated throughout the course of chronic kidney disease (CKD). Many diverse organic molecules bind and activate AHR and these ligands are reported to either promote glomerular and tubular damage or protect against kidney injury. AHR crosstalk with estrogen, peroxisome proliferator-activated receptor-&#x3b3;, and NF-&#x3ba;B pathways may contribute to the diversity of AHR responses during the various forms and stages of CKD. The roles of AHR in kidney fibrosis, metabolism and the renin angiotensin system are described to offer insight into CKD pathogenesis and therapies.</p>
</abstract>
<kwd-group>
<kwd>RAAS</kwd>
<kwd>aryl hydrocarbon (Ah) receptor</kwd>
<kwd>kynurenine</kwd>
<kwd>hypoxia</kwd>
<kwd>PPAR &#x3b3;</kwd>
<kwd>TGF&#x2014;&#x3b2;1</kwd>
</kwd-group>
<contract-sponsor id="cn001">National Institutes of Health<named-content content-type="fundref-id">10.13039/100000002</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Chronic kidney disease (CKD) affects approximately 37 million (1 in 7) US adults and is the ninth leading cause of death (<xref ref-type="bibr" rid="B23">CDC, 2020</xref>). The global incidence of CKD has been estimated at 13.7% (11.7&#x2013;15.1%) of the nearly eight billion people, or over one billion cases. Current therapies may slow and occasionally halt CKD progression, but most patients continue to progress. Further, these therapies are not fully available to or fully used by many of the globally-affected individuals. CKD is accompanied by premature morbidity and mortality from cardiovascular disease, as hypertension and uremia combine to drive cardiac and vascular damage.</p>
<p>CKD can be caused by systemic diseases and by primary kidney diseases. CKD due to systemic disease is more common; causes include diabetes mellitus (<xref ref-type="bibr" rid="B121">Navaneethan et&#x20;al., 2021</xref>), malignant hypertension (<xref ref-type="bibr" rid="B173">van den Born et&#x20;al., 2005</xref>), systemic lupus erythematosus and systemic vasculitis (<xref ref-type="bibr" rid="B115">Moiseev et&#x20;al., 2020</xref>). Primary kidney diseases, those that chiefly affect the kidney, include polycystic kidney disease, interstitial nephritis, and podocytopathies (minimal change disease, focal segmental glomerulosclerosis and membranous nephropathy) (<xref ref-type="bibr" rid="B34">Curran and Kopp, 2021</xref>).</p>
<p>Many CKD patients progress to end-stage kidney disease. Kidney transplant extends life for chronic dialysis patient by a median of 12&#xa0;years (2014&#x2013;2017: median 11.7 for deceased donor kidney recipients, median 12.1&#xa0;years for living donor kidney recipients) (<xref ref-type="bibr" rid="B139">Poggio et&#x20;al., 2020</xref>) and longer in some cases (<xref ref-type="bibr" rid="B199">Zolota et&#x20;al., 2020</xref>). Many patients on chronic dialysis, particularly in the First World, are older and have co-morbidities; their 5-year survival rate has been reported as 56% (<xref ref-type="bibr" rid="B127">Nordio et&#x20;al., 2012</xref>).</p>
<p>Increased rates of cardiovascular disease in CKD patients are the major driver of reduced survival (<xref ref-type="bibr" rid="B75">Jankowski et&#x20;al., 2021</xref>). Thus, better strategies are needed to prevent CKD and to slow or halt progressive loss of kidney function in individuals with&#x20;CKD.</p>
<p>CKD incidence is linked to several risk factors. Non-modifiable risk factors include genetic variants, low birth weight, and older age. Notable genetic variants include polymorphisms in angiotensin-I converting enzyme (<italic>ACE</italic>), angiotensin II type 1 receptor (<italic>AGTR1</italic>) and apolipoprotein L1 (<italic>APOL1</italic>), the latter accounting for much of the excess CKD risk among populations with sub-Saharan ancestry. Common modifiable risk factors include smoking, obesity, hypertension, diabetes mellitus, excessive alcohol consumption, heavy metal exposure, and excessive use of analgesic medicines (<xref ref-type="bibr" rid="B83">Kazancioglu, 2013</xref>). These factors compromise or alter kidney cell function, affecting cells in the glomerulus (podocytes, mesangial cells, and endothelial cells) and in the tubulo-interstitium (tubular cells, endothelial cells, and fibroblasts).</p>
<p>The various factors that induce CKD allow for the development of animal models to mimic the response. These can include 5/6 nephrectomy, unilateral ureteral obstruction nephropathy, angiotensin II (Ang II)-induced hypertension, ischemia/reperfusion-induced acute kidney injury, cisplatin- or cyclosporin A-induced nephropathy or models of systemic disease. An underlying factor in animal or human CKD progression is the aryl hydrocarbon receptor (AHR). This nuclear receptor is activated by endogenous and exogenous ligands and is required for normal kidney development and function. In cultures of murine metanephros, the AHR ligand, benzo(a)pyrene (BaP), disrupted nephrogenesis (<xref ref-type="bibr" rid="B46">Falahatpisheh and Ramos, 2003</xref>) and in fetuses from mice fed the AHR ligand 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD, dioxin), hydronephrosis was a common malformation (<xref ref-type="bibr" rid="B137">Peters et&#x20;al., 1999</xref>). AHR renal mRNA levels were also higher in female rats compared to males and at 7&#xa0;weeks post-5/6 nephrectomy, AHR renal mRNA levels decreased in females, but not males, highlighting a role for AHR in renal gender differences (<xref ref-type="bibr" rid="B100">Lu et&#x20;al., 2006</xref>).</p>
<p>In an animal model of CKD, AHR is not only activated in the kidney but additional organs. Specifically, transgenic mice expressing the AHR responsive-promoter tethered to a &#x3b2;-galactosidase reporter gene and subjected to ischemia/reperfusion-induced acute kidney injury identified AHR activation in the proximal and distal renal tubules, cardiac myocytes, hepatocytes, and microvasculature in the cerebral cortex (<xref ref-type="bibr" rid="B176">Walker et&#x20;al., 2020</xref>). This suggests a presence of AHR ligands in serum, which can activate cells in the kidney, heart, brain, and liver. By culturing serum with an AHR reporter cell line, elevated AHR activity was identified in diabetic nephropathy patients compared to controls (<xref ref-type="bibr" rid="B84">Kim et&#x20;al., 2013</xref>). Serum levels of the AHR ligand, indole-3 acetic acid, measured as a predictor of cardiovascular events and mortality in 120 CKD patients with stage 3&#x2013;5 CKD and stage 5D CKD (<xref ref-type="bibr" rid="B42">Dou et&#x20;al., 2015</xref>). Indole-3 acetic acid (<xref ref-type="bibr" rid="B92">Lin et&#x20;al., 2019</xref>) and another AHR ligand, indoxyl sulfate (<xref ref-type="bibr" rid="B189">Yeh et&#x20;al., 2016</xref>), are additionally associated with cognitive impairments in CKD patients. The gut is the source of indole, which is processed in the liver to indoxyl sulfate, highlighting AHR ligand crosstalk between organs and within the liver (<xref ref-type="bibr" rid="B99">Lowenstein and Nigam, 2021</xref>).</p>
<p>The heterogeneity of CKD presentation and progression may be associated with the diversity of AHR ligands that promote and inhibit disease. As shown in <xref ref-type="table" rid="T1">Table&#x20;1</xref>, select AHR compounds that promote kidney injury include non-steroidal anti-inflammatory drugs (NSAIDs), tryptophan metabolites, bacterial pigments, proton pump inhibitors, certain antibiotics, and polycyclic aromatic hydrocarbons (PAHs). Select AHR compounds that inhibit kidney injury include quinoline derivatives, dietary compounds (e.g., resveratrol, indole-3-carbinol), and the tryptophan photo-oxidation product, 6-formylindolo (3,2-b) carbazole (FICZ). The uremic solutes, which include tryptophan metabolites (e.g., indoxyl sulfate, indole-3-acetic acid), contribute to increased vascular permeability, vessel leakage and inflammation (<xref ref-type="bibr" rid="B47">Falconi et&#x20;al., 2021</xref>). The mechanisms may involve indoxyl sulfate-induced endothelial adhesion molecules, which bind to and recruit leukocytes as shown <italic>in&#x20;vitro</italic> (<xref ref-type="bibr" rid="B72">Ito et&#x20;al., 2016</xref>). In addition, the AHR antagonist, resveratrol, blocked indoxyl sulfate-induced bovine aorta endothelial cell permeability <italic>in&#x20;vitro</italic> (<xref ref-type="bibr" rid="B5">Assefa et&#x20;al., 2019</xref>), further supporting a function of AHR in CKD pathogenesis.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Function of select AHR ligands in chronic kidney disease.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Molecular class</th>
<th align="center">AHR ligand</th>
<th align="center">Experimental results</th>
<th align="center">Setting</th>
<th align="center">Effect on CKD</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td rowspan="2" align="left">Non-steroidal anti-inflammatory drug (NSAID)</td>
<td align="left">
<bold>Diclofenac</bold>
</td>
<td align="left">Decreased renal perfusion in healthy subjects 1&#xa0;h after a single oral dose (50&#xa0;mg) in health subjects</td>
<td rowspan="2" align="center">Human</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td>Anti-inflammatory <xref ref-type="bibr" rid="B11">Bass et&#x20;al. (2009)</xref>
</td>
<td align="left">
<xref ref-type="bibr" rid="B65">Hellms et&#x20;al. (2019)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">NSAID</td>
<td align="left">
<bold>Sulindac</bold>
</td>
<td rowspan="2" align="left">Promotes chronic decrements in glomerular filtration rate in patients with renal insufficiency <xref ref-type="bibr" rid="B118">Murray et&#x20;al. (1995)</xref>
</td>
<td rowspan="2" align="center">Human</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td>Anti-inflammatory <xref ref-type="bibr" rid="B29">Ciolino et&#x20;al. (2006)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Quinoline-3-carboxamide derivative that is structurally similar to kynurenine</td>
<td align="left">
<bold>Laquinimod</bold>
</td>
<td rowspan="2" align="left">Oral therapy (1&#x2013;25&#xa0;mg, x3/week) delays the development of lupus nephritis in a murine model <xref ref-type="bibr" rid="B98">Lourenco et&#x20;al. (2014)</xref>
</td>
<td rowspan="2" align="center">Mouse</td>
<td rowspan="2" align="center">Inhibits</td>
</tr>
<tr>
<td>Anti-inflammatory Blocks S100A9 binding to toll-like receptor (TLR)-4 or receptor for advanced glycation end-products (RAGE) <xref ref-type="bibr" rid="B19">Boros and Vecsei (2020)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Quinoline-3-carboxamide derivative that is structurally similar to kynurenine</td>
<td align="left">
<bold>Paquinimod</bold>
</td>
<td rowspan="2" align="left">Paquinimod in drinking water inhibits glomeruli complement deposition and hematuria in a murine model (<xref ref-type="bibr" rid="B14">Bengtsson et&#x20;al., 2012</xref>)</td>
<td rowspan="2" align="center">Mouse</td>
<td rowspan="2" align="center">Inhibits</td>
</tr>
<tr>
<td>Anti-inflammatory Blocks S100A9 binding to TLR4 or RAGE <xref ref-type="bibr" rid="B19">Boros and Vecsei (2020)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Quinoline derivative that reversibly inhibits ATP binding to vascular endothelial growth factor receptor-2 (VEGR-2)</td>
<td align="left">
<bold>Semaxanib</bold>
</td>
<td rowspan="2" align="left">Intravenous (x2/week, 145&#xa0;mg/m<sup>2</sup>) administration induced complete resolution of all metastatic tumors in a renal cell carcinoma patient (<xref ref-type="bibr" rid="B76">Jennens et&#x20;al., 2004</xref>)</td>
<td rowspan="2" align="center">Human</td>
<td rowspan="2" align="center">Inhibits</td>
</tr>
<tr>
<td>Anti-inflammatory VEGFR-2 inhibitor <xref ref-type="bibr" rid="B113">Mezrich et&#x20;al. (2012)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">4-amino-5-(4-chlorophenyl)-7-(dimethylethyl) pyrazolo [3,4-d]pyrimidine (PP2)]</td>
<td align="left">
<bold>PP2</bold>
</td>
<td rowspan="2" align="left">Intraperitoneal (2&#xa0;mg/kg) injection improves kidney function and attenuates kidney tubular injury in a murine LPS-induced acute kidney injury model <xref ref-type="bibr" rid="B132">Pak et&#x20;al. (2020)</xref>
</td>
<td rowspan="2" align="center">Mouse</td>
<td rowspan="2" align="center">Inhibits</td>
</tr>
<tr>
<td>Antagonizes proliferation, inflammation, differentiation, adhesion, migration, apoptosis, autophagy and angiogenesis Src family kinase inhibitor <xref ref-type="bibr" rid="B52">Frauenstein et&#x20;al. (2015)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Proton pump inhibitor</td>
<td align="left">
<bold>Omeprazole</bold>
</td>
<td rowspan="2" align="left">Promotes dose-dependent cell death in human and murine proximal tubular cell lines and in human primary proximal tubular cell cultures (<xref ref-type="bibr" rid="B50">Fontecha-Barriuso et&#x20;al., 2020</xref>)</td>
<td rowspan="2" align="center">Human cell culture</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td>Inhibits parietal cell H&#x2b;/K &#x2b; ATP pump <xref ref-type="bibr" rid="B128">Novotna et&#x20;al. (2014)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Proton pump inhibitor</td>
<td align="left">
<bold>Lansoprazole</bold>
</td>
<td rowspan="2" align="left">Intraperitoneal (25&#xa0;mg/kg) injection increases cell death and inflammation in a murine cisplatin-induced acute kidney model <xref ref-type="bibr" rid="B188">Ye et&#x20;al. (2021)</xref>
</td>
<td rowspan="2" align="center">Mouse</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td>Inhibits parietal cell H&#x2b;/K &#x2b; ATP pump <xref ref-type="bibr" rid="B128">Novotna et&#x20;al. (2014)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Antibiotic</td>
<td align="left">
<bold>Rifampicin</bold>
</td>
<td rowspan="2" align="left">Acute kidney injury in 25 tuberculosis and leprosy patients in response to rifampicin therapy <xref ref-type="bibr" rid="B119">Muthukumar et&#x20;al. (2002)</xref>
</td>
<td rowspan="2" align="center">Human</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td>Binds and inhibits bacterial DNA-dependent RNA polymerase <xref ref-type="bibr" rid="B144">Puyskens et&#x20;al. (2020)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Tryptophan metabolite</td>
<td align="left">
<bold>Kynurenine</bold>
</td>
<td rowspan="2" align="left">Lower estimated glomerular filtration rate was related to higher plasma kynurenine levels in a meta-analysis <xref ref-type="bibr" rid="B27">Cheng et&#x20;al. (2020)</xref>
</td>
<td rowspan="2" align="center">Human</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Anti-inflammatory <xref ref-type="bibr" rid="B112">Mezrich et&#x20;al. (2010)</xref>
</td>
</tr>
<tr>
<td rowspan="3" align="left">Tryptophan metabolite</td>
<td align="left">
<bold>Indole sulfate</bold>
</td>
<td rowspan="3" align="left">Induces glomerular lesions in mice, alters podocyte function and increases inflammation <xref ref-type="bibr" rid="B70">Ichii et&#x20;al. (2014)</xref> Levels are associated with increased mortality in hospital-acquired acute kidney injury <xref ref-type="bibr" rid="B177">Wang et&#x20;al. (2019)</xref>
</td>
<td rowspan="3" align="center">Mouse Human</td>
<td rowspan="3" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Pro-inflammatory</td>
</tr>
<tr>
<td align="left">Uremic toxin <xref ref-type="bibr" rid="B155">Schroeder et&#x20;al. (2010)</xref>
</td>
</tr>
<tr>
<td rowspan="4" align="left">Tryptophan metabolite</td>
<td align="left">
<bold>Indole-3-acetic acid</bold>
</td>
<td rowspan="4" align="left">Blood levels are increased with chronic kidney disease stage 5D and fell substantially after kidney transplantation <xref ref-type="bibr" rid="B91">Liabeuf et&#x20;al. (2020)</xref>
</td>
<td rowspan="4" align="center">Human</td>
<td rowspan="4" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Pro-inflammatory</td>
</tr>
<tr>
<td align="left">Pro-thrombotic</td>
</tr>
<tr>
<td align="left">Uremic toxin <xref ref-type="bibr" rid="B1">Addi et&#x20;al. (2019)</xref>
</td>
</tr>
<tr>
<td rowspan="3" align="left">Tryptophan metabolite</td>
<td align="left">
<bold>Indoxyl glucuronide</bold>
</td>
<td rowspan="3" align="left">Serum levels are elevated in hemodialysis patients <xref ref-type="bibr" rid="B73">Itoh et&#x20;al. (2013)</xref>
</td>
<td rowspan="3" align="center">Human</td>
<td rowspan="3" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Hypoxic transcription factor antagonist</td>
</tr>
<tr>
<td align="left">Uremic toxin <xref ref-type="bibr" rid="B4">Asai et&#x20;al. (2018)</xref>
</td>
</tr>
<tr>
<td rowspan="4" align="left">Tryptophan photo-oxidation product</td>
<td align="left">
<bold>6-formylindolo (3,2-b) carbazole (FICZ)</bold>
</td>
<td rowspan="4" align="left">Intraperitoneally FICZ administered (100&#xa0;&#x3bc;g/kg/d for 4&#xa0;days) to mice with rhabdomyolysis and ischemia/reperfusion-induced acute kidney injury attenuated kidney damage <xref ref-type="bibr" rid="B169">Tao et&#x20;al. (2021)</xref>
</td>
<td rowspan="4" align="center">Mouse</td>
<td rowspan="4" align="center">Inhibits</td>
</tr>
<tr>
<td align="left">Promotes IL-22 production</td>
</tr>
<tr>
<td align="left">Regulates Th17 and T regulatory cell development</td>
</tr>
<tr>
<td align="left">Concentration-dependent activity <xref ref-type="bibr" rid="B148">Rannug and Rannug (2018)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Polycyclic aromatic hydrocarbons (PAHs)</td>
<td align="left">
<bold>Benzo (a) pyrene (B[a]P)</bold>
</td>
<td rowspan="2" align="left">Intraperitoneal injection produces oxidative stress, DNA damage and reduced kidney function <xref ref-type="bibr" rid="B38">Deng et&#x20;al. (2018)</xref>
</td>
<td rowspan="2" align="center">Mouse</td>
<td rowspan="2" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Carcinogen <xref ref-type="bibr" rid="B160">Shimizu et&#x20;al. (2000)</xref>
</td>
</tr>
<tr>
<td rowspan="3" align="left">
<italic>Pseudomonas aeruginosa</italic> bacterial pigments</td>
<td align="left">
<bold>Phenazines</bold> (1-hydroxyphenazine, phenazine-1-carboxylic acid, phenazine-1-carboxamide, pyocyanin)</td>
<td rowspan="3" align="left">
<italic>Pseudomonas aeruginosa</italic> urinary tract infections are associated with high mortality in hospitalized patients <xref ref-type="bibr" rid="B86">Lamas Ferreiro et&#x20;al. (2017)</xref>
</td>
<td rowspan="3" align="center">Human</td>
<td rowspan="3" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Pro-inflammatory</td>
</tr>
<tr>
<td align="left">Cytotoxic <xref ref-type="bibr" rid="B117">Moura-Alves et&#x20;al. (2014)</xref>
</td>
</tr>
<tr>
<td rowspan="3" align="left">
<italic>Mycobacterium tuberculosis</italic> bacterial pigment</td>
<td align="left">
<bold>Naphthoquinone phthiocol</bold>
</td>
<td rowspan="3" align="left">Interstitial nephritis and acute renal failure occur in response to disseminated infection or a localized genitourinary disease <xref ref-type="bibr" rid="B36">Daher Ede et&#x20;al. (2013)</xref>
</td>
<td rowspan="3" align="center">Human</td>
<td rowspan="3" align="center">Promotes</td>
</tr>
<tr>
<td align="left">Pro-inflammatory</td>
</tr>
<tr>
<td align="left">Cytotoxic <xref ref-type="bibr" rid="B117">Moura-Alves et&#x20;al. (2014)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">Epstein-Barr virus (EBV) latent protein</td>
<td align="left">
<bold>EBV nuclear antigen 3</bold>
</td>
<td rowspan="2" align="left">EBV genome is present in proximal tubule epithelial cells of patients with chronic interstitial nephritis <xref ref-type="bibr" rid="B13">Becker et&#x20;al. (1999)</xref>
</td>
<td rowspan="2" align="center">Human</td>
<td rowspan="2" align="center">N/A</td>
</tr>
<tr>
<td align="left">Function not significantly explored <xref ref-type="bibr" rid="B82">Kashuba et&#x20;al. (2006)</xref>
</td>
</tr>
<tr>
<td rowspan="3" align="left">Bioactive compound found in cruciferous vegetables</td>
<td align="left">
<bold>Indole-3-carbinol (I3C)</bold>
</td>
<td rowspan="3" align="left">Oral pre-treatment (20&#xa0;mg/kg/day) improves cisplatin-induced acute nephrotoxicity indices in rats <xref ref-type="bibr" rid="B44">El-Naga and Mahran (2016)</xref>
</td>
<td rowspan="3" align="center">Rat</td>
<td rowspan="3" align="center">Inhibits</td>
</tr>
<tr>
<td align="left">Anti-inflammatory</td>
</tr>
<tr>
<td align="left">Anti-angiogenic (<xref ref-type="bibr" rid="B141">Popolo et&#x20;al., 2017</xref>)</td>
</tr>
<tr>
<td rowspan="4" align="left">Polyphenolic compound present in grapes</td>
<td align="left">
<bold>Resveratrol</bold>
</td>
<td rowspan="4" align="left">Oral administration (5&#xa0;mg/day/100&#xa0;g) at the initiation of a rat anti-glomerular basement membrane nephritis model reduces proteinuria, hypoalbuminemia and hyperlipidemia <xref ref-type="bibr" rid="B126">Nihei et&#x20;al. (2001)</xref>
</td>
<td rowspan="4" align="center">Rat</td>
<td rowspan="4" align="center">Inhibits</td>
</tr>
<tr>
<td align="left">Antagonizes AHR transcriptional responses in an estrogen receptor-&#x3b1;-dependent manner</td>
</tr>
<tr>
<td align="left">Chemoprotective</td>
</tr>
<tr>
<td align="left">Cardioprotective <xref ref-type="bibr" rid="B136">Perdew et&#x20;al. (2010)</xref>
</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Legend. Shown are 12 classes of compounds that bind aryl hydrocarbon receptors (AHR), either activating or suppressing AHR activity. Some compounds affect kidney function. Compounds with negative effects tend to speed chronic kidney disease (CKD) progression, while those with positive effects tend to slow CKD progression in animal models and/or human patients.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>Independent of the inciting cause of kidney damage, subsequent progression of CKD is associated with metabolic disturbances, oxidative stress, and inflammation, all of which promote fibrogenesis, irreversible nephron loss, and ultimately reduce the glomerular filtration rate (<xref ref-type="bibr" rid="B150">Ruiz-Ortega et&#x20;al., 2020</xref>). Reduced kidney function leads to the retention of various metabolic products, particularly nitrogenous compounds and often excess fluid, sodium, potassium and phosphate, among many small molecules. These metabolic alterations are characteristic of uremia, and some of these in turn, promote cardiovascular disease (<xref ref-type="bibr" rid="B55">Ghoshal and Freedman, 2019</xref>).</p>
</sec>
<sec id="s2">
<title>Fibrosis in CKD</title>
<p>Tissue damage from injury or disease induces tissue remodeling and repair. Dysregulation of this process causes an imbalance in extracellular matrix (ECM) homeostasis and the formation of fibrotic tissue. Kidney interstitial ECM consists of diverse molecules, of which the principal families are collagen (types I, II, III, V, VI, VII, and XV), glycoproteins (<italic>e.g.,</italic> fibronectin, laminin), proteoglycans (<italic>e.g.,</italic> biglycan, decorin, versican) and glycosaminoglycans (<italic>e.g.,</italic> chondroitin sulfate, dermatan sulfate, heparin sulfate, hyaluronan). Collectively, these molecules anchor cells within tissue (<xref ref-type="bibr" rid="B22">Bulow and Boor, 2019</xref>).</p>
<p>The human genome encodes three isoforms of TGF-&#x3b2; (TGF-&#x3b2;1, TGF-&#x3b2;2, TGF-&#x3b2;3). With regard to extracellular matrix biology; all three isoforms may promote collagen production and tissue fibrosis (<xref ref-type="bibr" rid="B33">Curran and Keely, 2013</xref>; <xref ref-type="bibr" rid="B165">Sun T. et&#x20;al., 2021</xref>; <xref ref-type="bibr" rid="B133">Panizo et&#x20;al., 2021</xref>). Activated inflammatory cells secrete inactive TGF-&#x3b2;1 bound non-covalently to a latency associated peptide (LAP), which is disulfide bound to the latent TGF-&#x3b2; binding protein (LTBP). Tissue transglutaminase-2 binds the released complex of LTBP:LAP:TGF-&#x3b2;1 to the ECM by enzymatically cross-linking LTBP to fibronectin and possibly additional ECM proteins associated with elastic fibers (<xref ref-type="bibr" rid="B129">Nunes et&#x20;al., 1997</xref>). Active TGF-&#x3b2;1 is released from the large latent complex by integrin-mediated mechanical deformation of the ECM and/or through degradation of LAP by proteases (<italic>e.g.,</italic> MMPs, thrombospondin-1, and plasmin) (<xref ref-type="bibr" rid="B33">Curran and Keely, 2013</xref>).</p>
<p>Intracellular signals downstream from the TGF-&#x3b2;1 receptor stimulate interstitial myofibroblast proliferation and secretion of collagen and additional ECM proteins (<xref ref-type="bibr" rid="B133">Panizo et&#x20;al., 2021</xref>), promote anaerobic metabolism (<xref ref-type="bibr" rid="B197">Zhao et&#x20;al., 2020</xref>), regulate immune cell differentiation (<xref ref-type="bibr" rid="B153">Sanjabi et&#x20;al., 2017</xref>), and induce the expression of integrins (<xref ref-type="bibr" rid="B33">Curran and Keely, 2013</xref>) and the nuclear factor-kappa-B (NF-&#x3ba;B) subunit, p65 (<xref ref-type="bibr" rid="B166">Sun et&#x20;al., 2015</xref>). Peroxisome proliferator-activated receptor-gamma (PPAR)-&#x3b3; ligands (<xref ref-type="bibr" rid="B58">Guo et&#x20;al., 2004</xref>), estrogen (<xref ref-type="bibr" rid="B71">Ito et&#x20;al., 2010</xref>), and AHR ligands (<xref ref-type="bibr" rid="B180">Woeller et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B158">Shi et&#x20;al., 2020</xref>) antagonize TGF-&#x3b2;1 cell signaling. The expression of TGF-&#x3b2;1 is induced by hypoxia (<xref ref-type="bibr" rid="B114">Mingyuan et&#x20;al., 2018</xref>), angiotensin II (<xref ref-type="bibr" rid="B81">Kagami et&#x20;al., 1994</xref>), cytokines (interleukin (IL)-4, IL-13), advanced glycation end products (AGEs) (<xref ref-type="bibr" rid="B89">Li et&#x20;al., 2004</xref>), and autocrine cell signals (<xref ref-type="bibr" rid="B16">Bhogal et&#x20;al., 2005</xref>). These factors are therefore likely to contribute to fibrogenesis in&#x20;CKD.</p>
<p>With respect to AHR, the quinoline-3-carboxamide derivative and AHR ligand, paquinimod, inhibits fibrosis in murine models of experimental systemic sclerosis (<xref ref-type="bibr" rid="B162">Stenstrom et&#x20;al., 2016</xref>) and liver fibrosis (<xref ref-type="bibr" rid="B51">Fransen Pettersson et&#x20;al., 2018</xref>). The anti-fibrotic functions of paquinimod in CKD have not been significantly explored. Mice fed a diet supplemented with 0.25% adenine generate increased levels of the AHR ligand, indoxyl sulfate, comparable to human CKD patients, leading to periglomerular fibrosis (<xref ref-type="bibr" rid="B176">Walker et&#x20;al., 2020</xref>). These data are supported in rats administered 200&#xa0;mg/kg indoxyl sulfate drinking water, resulting in the elevated expression of the mesenchymal marker, &#x3b1;-smooth muscle actin, and increased Masson&#x2019;s trichrome-positive fibrosis in the kidney (<xref ref-type="bibr" rid="B18">Bolati et&#x20;al., 2011</xref>). Indoxyl sulfate induces TGF-&#x3b2;1 expression and production in human proximal tubular cells (HK-2 cells) and the antioxidant, indole-3-propionic acid, suppresses this response (<xref ref-type="bibr" rid="B190">Yisireyili et&#x20;al., 2017</xref>). The indole acetic acid derivative, mitochonic acid 5 (MA-5), inhibits mitochondrial reactive oxygen species and improves renal function in an ischemia-reperfusion injury model and a cisplatin&#x2013;induced nephropathy model (<xref ref-type="bibr" rid="B168">Suzuki et&#x20;al., 2016</xref>). Moreover, mice administered MA-5 through osmotic pump in a model of unilateral ureteral obstruction demonstrated reduced expression of TGF-&#x3b2;1, decreased collagen I staining, and reduced renal fibrosis (<xref ref-type="bibr" rid="B159">Shima et&#x20;al., 2017</xref>). Because dioxin-induced AHR promotes mitochondrial reactive oxygen species production and in AHR deficient mice, cellular mitochondrial reactive oxygen species are lower compared to controls (<xref ref-type="bibr" rid="B20">Brinkmann et&#x20;al., 2019</xref>), the type of ligand and presence of AHR are likely important to oxidative stress in&#x20;CKD.</p>
<p>Oxidative stress is associated with the activity of lysyl oxidases (LOX) (<xref ref-type="bibr" rid="B110">Martinez-Revelles et&#x20;al., 2017</xref>) and transglutaminases (<xref ref-type="bibr" rid="B12">Basso et&#x20;al., 2012</xref>), which promote vascular stiffness and neuronal death in murine models, respectively. These pleotropic proteins are involved in cell signaling and post-translational modifications, including the cross-linking of collagen. Calcium-dependent transglutaminases catalyze protein cross-links by introducing glutamyl-lysyl isopeptide bonds between target proteins. LOX catalyzes the formation of aldehydes from lysine residues in collagen and elastin, and this promotes cross-linking of these molecules in tissue (<xref ref-type="bibr" rid="B64">Heck et&#x20;al., 2013</xref>). Transglutaminase-2 and LOX expression are induced by hypoxia and TGF-&#x3b2; (<xref ref-type="bibr" rid="B33">Curran and Keely, 2013</xref>), indicating that these molecules facilitate increased cross-linking and fibrosis in tissues with a compromised blood supply.</p>
<p>Excessive ECM accumulation is prevented by the activity of matrix metalloproteinases (MMPs), which cleave fibrillar collagens (<xref ref-type="bibr" rid="B197">Zhao et&#x20;al., 2020</xref>). The AHR ligands FICZ (<xref ref-type="bibr" rid="B158">Shi et&#x20;al., 2020</xref>), kynurenine (<xref ref-type="bibr" rid="B90">Li et&#x20;al., 2014</xref>) and dioxin (<xref ref-type="bibr" rid="B171">Tsai et&#x20;al., 2014</xref>) promote MMP-1 <italic>in&#x20;vitro.</italic> The AHR ligand indole-3-carbinol inhibits MMP-2 and MMP-9 <italic>in&#x20;vitro</italic> (<xref ref-type="bibr" rid="B182">Wu et&#x20;al., 2005</xref>) and in a murine model of liver fibrosis, the AHR ligand paquinimod reduced the expression of MMP-2 (<xref ref-type="bibr" rid="B51">Fransen Pettersson et&#x20;al., 2018</xref>), highlighting the diversity of the AHR response in ECM maintenance. Increased production and deposition of type I collagen, primarily by fibroblasts, is associated with increased transglutaminase-2 activity, promoting the formation of a stiff matrix; this can progress to overt kidney fibrosis (<xref ref-type="bibr" rid="B22">Bulow and Boor, 2019</xref>; <xref ref-type="bibr" rid="B197">Zhao et&#x20;al., 2020</xref>).</p>
<p>In a study of 202 kidney disease cases of different etiologies, the levels of serum LOX and tissue LOX in renal biopsies were associated with the presence and degree of kidney fibrosis across diseases (<xref ref-type="bibr" rid="B195">Zhang XQ. et&#x20;al., 2020</xref>). In cyclosporin A-induced nephropathy in mice, treatment with LOX inhibitors attenuated inflammation, fibrosis and uremia (<xref ref-type="bibr" rid="B124">Nguyen et&#x20;al., 2021</xref>). Additionally, rats undergoing 5/6-nephrectomy and treated with transglutaminase inhibitors prevented a decline in kidney function and interstitial fibrosis (<xref ref-type="bibr" rid="B80">Johnson et&#x20;al., 2007</xref>), highlighting these cross-linkers as targets in CKD. A role for AHR in regulating these cross-linkers through MMP production or oxidative responses has not been significantly explored.</p>
</sec>
<sec id="s3">
<title>CKD Therapies</title>
<p>Treatment of CKD involves several approaches. Treating the underlying disease, including systemic diseases (diabetes mellitus, systemic lupus, systemic vasculitis, and others), may slow or halt progression (<xref ref-type="bibr" rid="B115">Moiseev et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B121">Navaneethan et&#x20;al., 2021</xref>). For example, the sodium-glucose transport protein 2 (SGLT2) inhibitor dapgliflozin was recently approved for progressive non-diabetic kidney disease of many etiologies as a result of studies demonstrating efficacy in reducing the risk for a combined endpoint of kidney function decline, kidney failure, cardiovascular death and hospitalization for heart failure (<xref ref-type="bibr" rid="B179">Wheeler et&#x20;al., 2021</xref>). Pathway-targeted treatments are increasingly available or in development for primary renal diseases or syndromes (<italic>e.g.,</italic> focal segmental glomerulosclerosis, membranous nephropathy, and polycystic kidney disease) (<xref ref-type="bibr" rid="B34">Curran and Kopp, 2021</xref>; <xref ref-type="bibr" rid="B49">Finnigan and Leslie, 2021</xref>). At the other end of the frequency scale, there are an estimated 10,000 rare diseases (<xref ref-type="bibr" rid="B61">Haendel et&#x20;al., 2020</xref>) and an unknown fraction of these have renal manifestations; many of these lack targeted therapies.</p>
<p>Non-specific therapies for CKD can slow and even halt progressive loss of kidney function. These include diet and medications for blood pressure control (target &#x3c;130/80) (<xref ref-type="bibr" rid="B48">Faqah and Jafar, 2011</xref>), antifibrotic therapies (inhibitors of renin, angiotensin II, and aldosterone, the latter being a potent profibrotic molecule) (<xref ref-type="bibr" rid="B196">Zhang et&#x20;al., 2019</xref>), and dietary sodium restriction and thiazide diuretics (the latter potentiates the antiproteinuric effects of the renin-angiotensin-aldosterone system antagonists) (<xref ref-type="bibr" rid="B135">Park et&#x20;al., 2014</xref>). SGLT2 inhibitors reduce progression of kidney damage in diabetes (<xref ref-type="bibr" rid="B172">Tuttle et&#x20;al., 2021</xref>) and recently this effect has been shown in non-diabetic kidney disease as well, possibly by reducing proximal tubule stress (<xref ref-type="bibr" rid="B2">Almaimani et&#x20;al., 2021</xref>).</p>
<p>There continues to be considerable interest in developing novel anti-fibrotic therapies for kidney disease, although progress has been slow. Pirfenidone is an anti-fibrotic agent (2014 U.S. FDA approval reference ID: 3642437) that showed efficacy in phase two trials for idiopathic pulmonary fibrosis (<xref ref-type="bibr" rid="B145">Raghu et&#x20;al., 1999</xref>; <xref ref-type="bibr" rid="B106">Maher et&#x20;al., 2020</xref>). Preliminary studies of pirfenidone in studies of focal segmental glomerulosclerosis (<xref ref-type="bibr" rid="B28">Cho et&#x20;al., 2007</xref>) and in diabetic nephropathy (<xref ref-type="bibr" rid="B157">Sharma et&#x20;al., 2011</xref>) were encouraging but further development appears to have stalled. The exact mechanisms of action of pirfenidone are not fully characterized. Recent studies suggest the molecule may be a ligand for peroxisome proliferator-activated receptors (e.g., PPAR-&#x3b1;, PPAR-&#x3b3;) (<xref ref-type="bibr" rid="B62">Hamidi et&#x20;al., 2021</xref>), which appears to inhibit transforming growth factor (TGF)-&#x3b2;1-induced collagen I production (<xref ref-type="bibr" rid="B30">Cui et&#x20;al., 2020</xref>). Pirfenidone may also suppress other profibrotic and pro-inflammatory mediators, including fibroblast growth factor (FGF), platelet-derived growth factor (PDGF), vascular endothelial growth factor (VEGF) (<xref ref-type="bibr" rid="B24">Chaudhary et&#x20;al., 2007</xref>), interleukin-1&#x3b2; (IL-1&#x3b2;) and tumor necrosis factor (TNF) (<xref ref-type="bibr" rid="B45">Evani et&#x20;al., 2020</xref>).</p>
<p>Similarly, ligands of the aryl hydrocarbon receptor (AHR), specifically tryptophan metabolites [<italic>e.g.,</italic> 2-(10&#xa0;H-indole30-carbonyl)-thiazole-4-carboxylic acid methyl ester (ITE) and FICZ], are capable of inhibiting TGF-&#x3b2;1-induced collagen I production in models of systemic sclerosis and thyroid eye disease (<xref ref-type="bibr" rid="B180">Woeller et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B158">Shi et&#x20;al., 2020</xref>). An analog (SZR72) of kynurenic acid, a tryptophan metabolite and AHR ligand, inhibits the production of TNF in human blood cultures (<xref ref-type="bibr" rid="B9">Balog et&#x20;al., 2021</xref>). Also, the plant-derived AHR ligand, indole-3-carbinol (I3C), antagonizes IL-1&#x3b2; production in cell lines (<xref ref-type="bibr" rid="B78">Jiang et&#x20;al., 2013</xref>). AHR expression is induced by growth factors (PDGF, FGF) (<xref ref-type="bibr" rid="B174">Vaziri et&#x20;al., 1996</xref>) and in a murine model of cardiac hypertrophy, AHR antagonizes hypoxia-induced VEGF production and the development of fibrosis (<xref ref-type="bibr" rid="B69">Ichihara et&#x20;al., 2019</xref>). These functions of AHR suggest that AHR may be a therapeutic target in CKD. However, the AHR response is defined by a diverse array of toxins, endogenous molecules, drugs, dietary components, and pathogens that may promote or inhibit CKD (<xref ref-type="table" rid="T1">Table&#x20;1</xref>). AHR may additionally exhibit crosstalk with estrogen receptors, PPAR-&#x3b3;, NF-kB, and cell signals in hypoxia and TGF-&#x3b2;1 pathways. In this regard, AHR has shown considerable, and puzzling, diversity of function in the kidney and manifestations associated with CKD. The effects of AHR in cell signaling pathways that influence fibrosis, the renin angiotensin aldosterone system (RAAS), and metabolism are therefore herein described.</p>
</sec>
<sec id="s4">
<title>AHR Stability, Signaling, and E3 Ubiquitin Ligase Activity</title>
<p>AHR is a ligand-activated transcription factor and E3 ubiquitin ligase with pleotropic functions in mammalian biology. Sequence homology between circadian [period (<italic>PER</italic>)] and neurodevelopment (single-minded (<italic>SIM</italic>) genes in <italic>Drosophila melanogaster</italic> and a gene in the human dioxin signaling pathway (AHR nuclear translocator (<italic>ARNT</italic>)) established the PER-ARNT-SIM (PAS) domain protein superfamily, of which AHR is a member. PAS domains mediate protein-protein and small-molecule-protein interactions. These include AHR dimerization with ARNT and AHR binding interactions with chaperone proteins and ligands (<xref ref-type="bibr" rid="B111">McIntosh et&#x20;al., 2010</xref>).</p>
<p>Inactive AHR exists in the cytosol in a multi-protein complex, which includes a heat shock protein-90 (Hsp90) dimer, a co-chaperone (p23), an AHR interacting protein (AIP/XAP2/ARA9), and various co-activators, including members of Src family of non-receptor tyrosine kinases (<xref ref-type="bibr" rid="B7">Avilla et&#x20;al., 2020</xref>). AIP (<xref ref-type="bibr" rid="B88">Lees et&#x20;al., 2003</xref>) and p23 (<xref ref-type="bibr" rid="B134">Pappas et&#x20;al., 2018</xref>) block ubiquitination of AHR, possibly by inhibiting AHR binding interactions with the E3 ubiquitin ligase C-terminal hsp70-interacting protein (STUB1/CHIP) (<xref ref-type="bibr" rid="B116">Morales and Perdew, 2007</xref>). E3 ubiquitin ligases provide a platform for ubiquitin enzymes to transfer ubiquitin to proteins. Ubiquitin binding can either alter protein signaling or target the protein to the proteasome for degradation (<xref ref-type="bibr" rid="B21">Buetow and Huang, 2016</xref>). Both ligand-bound and unliganded AHR can be targeted to the proteasome for degradation (<xref ref-type="bibr" rid="B104">Ma and Baldwin, 2000</xref>; <xref ref-type="bibr" rid="B116">Morales and Perdew, 2007</xref>).</p>
<p>Ligand binding to AHR in the multi-protein complex induces conformational changes in AHR and reorganization of the chaperones to facilitate nuclear localization of the complex (<xref ref-type="bibr" rid="B7">Avilla et&#x20;al., 2020</xref>). AHR activation induces Src kinase phosphorylation (<xref ref-type="bibr" rid="B185">Xie et&#x20;al., 2012</xref>) and cell signals that promote the production of IL-10 (<xref ref-type="bibr" rid="B198">Zhu et&#x20;al., 2018</xref>). Release of active AHR from the complex allows AHR to partner with ARNT, which can also either dimerize with and activate hypoxia inducible transcription factors (HIFs) or the AHR repressor (AHRR). HIFs compete with AHR for ARNT dimerization and promote transcription of genes expressing enzymes in the glycolytic pathway (<xref ref-type="bibr" rid="B57">Goda and Kanai, 2012</xref>). AHR-induced AHRR not only competes with AHR for ARNT but also suppresses AHR function as a transcription factor by binding AHR responsive elements (AHREs) (<xref ref-type="bibr" rid="B7">Avilla et&#x20;al., 2020</xref>) (<xref ref-type="fig" rid="F1">Figure&#x20;1</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>AHR-initiated cell signaling pathways. (1) The aryl hydrocarbon receptor (AHR) forms a complex with chaperone molecules in the cytoplasm. Ligand binding may promote transport of the complex into the nucleus. Alternatively, release of AHR from the complex may promote interactions with an E3 ligase (<italic>e.g.,</italic> STUB1) which acts as a platform for AHR ubiquitination and targeted degradation <italic>via</italic> the proteasome. Both ligand-bound and unliganded AHR can be targeted to the proteasome. (2) AHR dissociates from its cytoplasmic complex to bind the AHR nuclear translocator (ARNT), which alternatively may dimerize with hypoxia inducible transcription factors (HIFs). AHR induces activation of signal-transducer and activator of transcription (STAT3) through Src signaling, acting as a tyrosine protein kinase involved in the production of IL-10. (3) AHR promotes the expression of the AHR repressor (AHRR), which also dimerizes with ARNT and negatively regulates AHR functions by competing with AHR binding sites in DNA regulatory sequences. (4) Activation of AHR or HIFs induces transcription and translation of PARP7 (poly ADP-ribosyl transferase 7), also known as TIPARP (TCDD-inducible poly-ADP-ribose polymerase). TIPARP further promotes polyADP-ribosylation and subsequent degradation of AHR and HIFs (5) Downstream responses of AHR can include activation of the biotransformation enzymes, including cytochrome P450 enzymes (P450s), UDP-gluconosyltransferases (UGTs), and ATP-binding cassette transporters (ABCs). Downstream responses of HIFs can include increased glycolysis and the expression of immunomodulatory genes that provoke inflammation.</p>
</caption>
<graphic xlink:href="fphar-13-782199-g001.tif"/>
</fig>
</sec>
<sec id="s5">
<title>AHR in Drug Metabolism</title>
<p>AHR has a pivotal role in regulating the clearance of xenobiotics and particular endogenous compounds (<italic>e.g.,</italic> metabolites of tryptophan, arachidonic acid and hemoglobin), which also bind and activate AHR during various processes, including development (<xref ref-type="bibr" rid="B7">Avilla et&#x20;al., 2020</xref>), hematopoiesis (<xref ref-type="bibr" rid="B3">Angelos and Kaufman, 2018</xref>) and disease pathogenesis (<xref ref-type="bibr" rid="B31">Curran et&#x20;al., 2018</xref>; <xref ref-type="bibr" rid="B32">Curran et&#x20;al., 2019</xref>). In the clearance of these molecules, the AHR:ARNT heterodimer induces the expression of proteins involved each of the three metabolic biotransformation pathways. These proteins neutralize the activity of endogenous and xenobiotic molecules and promote the efflux of these molecules from the cell (<xref ref-type="fig" rid="F2">Figure&#x20;2</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>AHR-initiated biotransformation. AHR induces the transcription of certain genes whose products are involved in each of the three phases of drug metabolism.</p>
</caption>
<graphic xlink:href="fphar-13-782199-g002.tif"/>
</fig>
<p>Phase I metabolism includes oxidation, reduction and hydrolysis of substrates, to generate more water-soluble, but generally still active, xenobiotic molecules (<xref ref-type="bibr" rid="B138">Phang-Lyn and Llerena, 2021</xref>). AHR-induced cytochrome P450 enzymes are a common measure of AHR activation in the liver. Their relevance in the kidney (<xref ref-type="bibr" rid="B85">Knights et&#x20;al., 2013</xref>) and the immune system (<xref ref-type="bibr" rid="B43">Effner et&#x20;al., 2017</xref>) are subjects of on-going study. Cytochrome P450 enzymes oxidize substrates and therefore contribute to phase I metabolism (<xref ref-type="bibr" rid="B192">Zanger and Schwab, 2013</xref>).</p>
<p>Phase II metabolism is carried out by conjugating enzymes, which add a hydrophilic group to targeted molecules; these protein modifications include glucuronidation, sulfation, acetylation, and methylation (<xref ref-type="bibr" rid="B138">Phang-Lyn and Llerena, 2021</xref>). UDP-gluconosyltransferase (UGT)-1A5, UTG1A6, UGT1A7, UGT1A9, UGT2B4, UGT2B4, and UGT2B17 are expressed in the kidney (<xref ref-type="bibr" rid="B85">Knights et&#x20;al., 2013</xref>). AHR can induce UGT1A1 (<xref ref-type="bibr" rid="B191">Yueh et&#x20;al., 2005</xref>) and UGT1A6 (<xref ref-type="bibr" rid="B17">Bock and Bock-Hennig, 2010</xref>) in human cell&#x20;lines.</p>
<p>Phase III metabolism includes ATP-binding cassette (ABC) and solute carrier (SLC) transporters that facilitate xenobiotic efflux (<xref ref-type="bibr" rid="B138">Phang-Lyn and Llerena, 2021</xref>). Exposing rat brain capillaries to the AHR ligand, <italic>2,3,7,8-tetrachlorodibenzo-p-dioxin</italic> (TCDD, dioxin), induced production of the ABC transporter, P-glycoprotein, also known as multidrug resistance protein (MRP)-1 (<xref ref-type="bibr" rid="B178">Wang et&#x20;al., 2011</xref>). P-glycoprotein and additional ABC transporters [<italic>e.g.,</italic> MRP2, MRP4, breast cancer resistance protein (BCRP)] are also induced in dioxin exposed killifish renal proximal tubules (<xref ref-type="bibr" rid="B107">Mahringer et&#x20;al., 2019</xref>). Further testing of these responses in human kidney cells would enhance our knowledge of AHR kidney function.</p>
</sec>
<sec id="s6">
<title>AHR Function in ADP-Ribosylation</title>
<p>Both activated AHR (<xref ref-type="bibr" rid="B105">MacPherson et&#x20;al., 2013</xref>) and HIF-1&#x3b1; (<xref ref-type="bibr" rid="B193">Zhang L. et&#x20;al., 2020</xref>) promote transcription of the <italic>TCDD-inducible poly(ADP-ribose) polymerase (TIPARP/PARP7/ARTD14)</italic> gene. Poly-ADP-ribose polymerases (PARPs) post-translationally add a single ADP-ribosyl group (mono-ADP-ribosylation/MARylation) or multiple groups (poly-ADP-ribosylation/PARylation) to substrates (<italic>e.g</italic>., protein, DNA, and RNA) in regulating DNA repair, transcription, and cell signaling (<xref ref-type="bibr" rid="B152">Sanderson and Cohen, 2020</xref>). While the functional attributes of PARPs continue to be characterized, TIPARP uniquely is capable of negatively regulating its transcriptional activators (AHR, HIF-1&#x3b1;) (<xref ref-type="fig" rid="F1">Figure&#x20;1</xref>). The mechanisms appear to involve TIPARP co-localization with the particular transcription factor and the recruitment of an E3 ligase for ubiquitin-mediated proteasome degradation of the transcription factor (<xref ref-type="bibr" rid="B105">MacPherson et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B193">Zhang L. et&#x20;al., 2020</xref>). These integrated networks involving AHR and HIFs implicate AHR in basic metabolic processes and hypoxic responses during the development and progression of diseases such as CKD (<xref ref-type="bibr" rid="B53">Fu et&#x20;al., 2016</xref>).</p>
</sec>
<sec id="s7">
<title>AHR Regulatory Mechanisms in CKD Signaling Networks</title>
<p>CKD manifests hypertension (<xref ref-type="bibr" rid="B133">Panizo et&#x20;al., 2021</xref>), progressive kidney fibrosis (<xref ref-type="bibr" rid="B22">Bulow and Boor, 2019</xref>), and tissue hypoxia (<xref ref-type="bibr" rid="B53">Fu et&#x20;al., 2016</xref>). Biochemical features include increased circulating plasma levels of extracellular nicotinamide phosphoribosyltransferase (eNAMPT/visfatin) (<xref ref-type="bibr" rid="B67">Hsu et&#x20;al., 2016</xref>) and elevated blood levels of kynurenine (<xref ref-type="bibr" rid="B27">Cheng et&#x20;al., 2020</xref>) (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). These pathologic processes and biomarkers are regulated by the RAAS, TGF-&#x3b2;1 cell signals, and metabolism. The roles of AHR in each of these systems is yet to be fully characterized.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Networks in CKD pathogenesis. <bold>TGF-&#x3b2;1 pathway:</bold> TGF-&#x3b2;1 signaling is initiated through serine/threonine kinase receptors, TGF-&#x3b2;1 receptor (T&#x3b2;R)-I and T&#x3b2;RII. TGF-&#x3b2; binding to T&#x3b2;RII recruits T&#x3b2;RI to form a receptor heterodimer, which is phosphorylated. SMAD2 and SMAD3 are recruited to the receptor heterodimer and are also phosphorylated. SMAD2 and SMAD3&#x20;co-localize with SMAD4 and translocate to the nucleus to activate genes, such as collagen and TGF-&#x3b2;1. ACE2 activity promotes the production of SMAD7, potentially <italic>via</italic> Ang-(1&#x2013;7)-induced Mas or AT<sub>2</sub>R receptor signals. SMAD7 is a negative regulator of TGF-&#x3b2;1 by recruiting E3 ligases to T&#x3b2;RI and blocking T&#x3b2;RI-induced SMAD2/3 phosphorylation. Ligand activated AHR antagonizes TGF-&#x3b2;1 and collagen gene expression and protein production, which are associated with fibrosis. Ligand activated AHR also induces the degradation of collagen through the production of matrix metalloproteinase-1 (MMP1). <bold>Renin angiotensin aldosterone system (RAAS):</bold> Angiotensin I (Ang I) is cleaved by angiotensin converting enzyme (ACE) into Ang II. The binding of Ang II to AT<sub>1</sub>R or AT<sub>2</sub>R promotes the stable expression of HIF-1&#x3b1; and hypoxic responses. The ACE homolog, ACE2, inactivates Ang II by cleaving and processing Ang I and Ang II into Ang-(1&#x2013;7), which is a ligand for the Mas receptor and AT<sub>2</sub>R. AHR regulates the expression of ACE2 and Mas. AT<sub>2</sub>R activation promotes T&#x3b2;RII degradation, inhibiting TGF-&#x3b2;1 signals. <bold>NAD de novo biosynthesis pathway (also known as the kynurenine pathway):</bold> Tryptophan catabolism is the defining feature of this pathway. The rate limiting enzymes are indoleamine dioxygenase (IDO) and tryptophan dioxygenase (TDO). IDO1 is induced by AHR:ARNT transcriptional activation of the IDO promoter and promotes the production of kynurenine, which can be released as a cytokine. A series of additional enzymes (highlighted in white) catalyze the production of immunomodulatory and neuroregulatory molecules that are further processed into NAD. <bold>Anaerobic metabolism:</bold> The production of adenosine triphosphate (ATP) in the absence of oxygen occurs through enzymatic reactions in glycolysis and results in the production of lactate and the increased formation of NADH relative to NAD. Enzymes in this pathway are regulated by HIF-1&#x3b1; activated genes (highlighted in orange), which can be stabilized by the RAAS. <bold>NAD salvage pathway:</bold> The primary source of mammalian NAD is from the recycling nicotinamide, which is the amide version of vitamin B3 and a by-product from the enzymatic activity of Poly-ADP-ribose polymerases (PARPs) and sirtuins. The rate limiting enzyme is nicotinamide phosphoribosyltransferase (NAMPT), which is transcriptionally activated by HIF-2&#x3b1; and functions as an extracellular cytokine. <bold>Indicators of disruption in homeostasis:</bold> Factors and conditions along these pathways are induced during CKD pathogenesis.</p>
</caption>
<graphic xlink:href="fphar-13-782199-g003.tif"/>
</fig>
</sec>
<sec id="s8">
<title>RAAS and AHR</title>
<p>The RAAS pathway involves a series of enzymatic reactions that contribute to the homeostatic control of extracellular fluid volume, arterial pressure, tissue perfusion, electrolyte balance, and wound healing. Renin, released from glomerular juxtaglomerular cells, processes liver-produced angiotensinogen into angiotensin I (Ang I), which is further cleaved by a soluble ectoprotein, angiotensin converting enzyme (ACE), into Ang II. The binding of Ang II to the Ang II type 1 receptor (AT1R) promotes vasoconstriction and also induces the production of aldosterone, which promotes renal tubular sodium reabsorption and promotes fibrogenesis. The ACE homolog, ACE2, inactivates Ang II by cleaving and processing Ang I and Ang II into Ang (1&#x2013;7), which binds the Mas receptor and the AT<sub>2</sub>R. By these activities, ACE2 antagonizes the vasoconstrictive, inflammatory, prothrombotic, and fibrotic effects associated with ACE/Ang II/AT<sub>1</sub>R activity (<xref ref-type="bibr" rid="B35">Curran et&#x20;al., 2020</xref>).</p>
<p>The functions of AHR in the RAAS signaling pathways appear to depend upon the level of expression of AHR and the AHR ligand. AHR-deficient mice develop cardiac hypertrophy through mechanisms involving HIF-1&#x3b1; cell signals (<xref ref-type="bibr" rid="B170">Thackaberry et&#x20;al., 2002</xref>), Ang II-induced fibrosis (<xref ref-type="bibr" rid="B69">Ichihara et&#x20;al., 2019</xref>), increased plasma levels of endothelin-1, and elevated mean arterial pressures (<xref ref-type="bibr" rid="B102">Lund et&#x20;al., 2003</xref>). In heterozygous AHR (&#x2b;/&#x2212;) mice, blood pressure remains normal, and AHR (&#x2b;/&#x2212;) mice are more responsive to ACE inhibition and an endothelin-1 receptor antagonist compared to AHR (&#x2212;/&#x2212;) null mice (<xref ref-type="bibr" rid="B194">Zhang et&#x20;al., 2010</xref>).</p>
<p>The effects of overexpression of AHR on RAAS activity have not been extensively examined. AHR overexpression in adipocytes shortens the half-life of PPAR-&#x3b3; by recruiting PPAR-&#x3b3; to the cullin 4b (CUL4B)-RING E3 ubiquitin ligase complex (<xref ref-type="bibr" rid="B41">Dou et&#x20;al., 2019</xref>), leading to PPAR-&#x3b3; degradation in the proteasome. Because reduced PPAR-&#x3b3; activity induces AT<sub>1</sub> expression and signaling in human fibroblasts (<xref ref-type="bibr" rid="B6">Auclair et&#x20;al., 2013</xref>), overexpression of AHR may also affect the ACE/Ang II/AT<sub>1</sub>R pathway. Estrogen receptor (ER)-&#x3b1; can also be recruited by AHR to the CUL4B-RING E3 ubiquitin ligase complex resulting in ubiquitination (<xref ref-type="bibr" rid="B101">Luecke-Johansson et&#x20;al., 2017</xref>) or targeted by TIPARP ADP-ribosylation (<xref ref-type="bibr" rid="B193">Zhang L. et&#x20;al., 2020</xref>). These post-translational modifications that promote ER-&#x3b1; proteasome degradation indicate a potential role of AHR in sex-related differences in RAAS activity (<xref ref-type="bibr" rid="B151">Sabbatini and Kararigas, 2020</xref>) (<xref ref-type="fig" rid="F4">Figure&#x20;4</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>AHR degradative functions. AHR participates in the cullin/RING ubiquitin ligase (CRL-type E3 ligase) complex involving chaperones [<italic>e.g.</italic>, cullin 4b (CUL4B)] to promote ubiquitination of estrogen receptor (ER)-&#x3b1; or peroxisome proliferator-activated receptor (PPAR)-&#x3b3;. Activation of AHR or HIFs induces transcription and translation of PARP7 (poly ADP-ribosyl transferase 7), also known as TIPARP (TCDD-inducible poly-ADP-ribose polymerase). TIPARP promotes polyADP-ribosylation and subsequent degradation of ER-&#x3b1;.</p>
</caption>
<graphic xlink:href="fphar-13-782199-g004.tif"/>
</fig>
<p>Various AHR ligands increase in abundance during CKD pathogenesis and may affect RAAS activity. Reduced kidney function causes blood retention of a heterogeneous mix of metabolites (uremic solutes), which may be more effectively removed by continuous ambulatory peritoneal dialysis compared to low-flux hemodialysis (<xref ref-type="bibr" rid="B186">Xie et&#x20;al., 2019</xref>). Tryptophan metabolites are uremic solutes and are AHR ligands, which promote CKD progression (<xref ref-type="table" rid="T1">Table&#x20;1</xref>). In a small study of CKD patients, an increased ratio of the tryptophan metabolite, kynurenine, to tryptophan was associated with macroalbuminuria and responsiveness to AT<sub>1</sub>R blockers (ARBs) (<xref ref-type="bibr" rid="B183">Wu et&#x20;al., 2020</xref>). This study suggests upregulation of the ACE/Ang II/AT<sub>1</sub>R pathway in these individuals. However, <italic>in&#x20;vitro</italic> examination of kynurenine-exposed BEAS-2B lung epithelial cells revealed AHR-induced production of ACE2 (<xref ref-type="bibr" rid="B103">Lv et&#x20;al., 2021</xref>).</p>
<p>Because ACE2 activity antagonizes ACE/Ang II/AT<sub>1</sub>R cell signaling (<xref ref-type="bibr" rid="B35">Curran et&#x20;al., 2020</xref>), additional factors in the RAAS pathway may be affected by AHR. One such factor is the Mas receptor. In normotensive and hypertensive rats, oral administration of the uremic solute, indoxyl sulfate, reduced kidney Mas receptor expression. This study further demonstrated that indoxyl sulfate-exposed human kidney-2 (HK-2) proximal tubular cells reduced Mas receptor expression and this response was antagonized by Ang-(1&#x2013;7) pre-treatment or by the absence of AHR (<xref ref-type="bibr" rid="B123">Ng et&#x20;al., 2014</xref>). Thus, AHR expression and activation are integral to the RAAS homeostatic function.</p>
</sec>
<sec id="s9">
<title>Metabolism and AHR</title>
<p>Ischemia and oxidative stress induce metabolic stressors (<italic>e.g.,</italic> hypoxia) and the production of pro-inflammatory mediators (e.g., IL-1&#x3b2;, TNF, IL-6) during the progression of CKD. In a comprehensive pathway map analysis of gene sets from 157 European patients with nine different types of CKD, metabolism and inflammation were identified as the two main pathways in the pathology leading to CKD progression (<xref ref-type="bibr" rid="B163">Stenvinkel et&#x20;al., 2021</xref>). Transcription factors, such as NF-&#x3ba;B and HIFs, regulate these responses and exhibit crosstalk with&#x20;AHR.</p>
<p>There are three isoforms of HIF-&#x3b1;: HIF-1&#x3b1;, HIF-2&#x3b1;, and HIF-3&#x3b1;, encoded by distinct genes: <italic>HIF1A</italic>, <italic>EPAS1</italic>, <italic>HIF3A</italic>. HIF-1&#x3b1; and HIF-2&#x3b1; are expressed in the kidney, compete with AHR for the dimer partner ARNT, and can be degraded in either the proteasome or the lysosome (<xref ref-type="bibr" rid="B68">Hubbi et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B79">Jochmanova et&#x20;al., 2013</xref>). Oxidative stress, hypoxia, Ang II, and certain peptides (<italic>e.g.</italic>, human epidermal growth factor receptor-2 (HER-2), IL-1&#x3b2;, insulin) (<xref ref-type="bibr" rid="B181">Wolf, 2005</xref>; <xref ref-type="bibr" rid="B33">Curran and Keely, 2013</xref>) reduce HIF post-translational modifications that target the protein for degradation and thereby stabilize HIF expression.</p>
<p>The most well-described HIF-1&#x3b1; transcriptional responses involve the expression of genes whose products are involved in glycolysis and the production of lactate (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). Specifically, the HIF-1&#x3b1;: ARNT heterodimer promotes transcription of <italic>SLC2A1</italic> (Solute Carrier Family two Member 1, GLUT1), <italic>HK1</italic> (hexokinase 1), <italic>HK2</italic> (hexokinase 2), <italic>PFK</italic> (phosphofructokinase), <italic>ALDOA</italic> (aldolase, fructose-bisphosphate A), <italic>GAPDH</italic> (glyceraldehyde-3-phosphate dehydrogenase), <italic>PGK1</italic> (phosphoglycerate kinase 1), and <italic>LDHA</italic> (lactate dehydrogenase A) (<xref ref-type="bibr" rid="B156">Semenza et&#x20;al., 1996</xref>; <xref ref-type="bibr" rid="B79">Jochmanova et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B37">Del Rey et&#x20;al., 2017</xref>). Anaerobic metabolism decreases the levels of nicotinamide adenine dinucleotide (NAD) and increases the formation of the reduced form, NADH (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). Despite their differential functions in the RAAS, AT<sub>1</sub>R and AT<sub>2</sub>R can both induce HIF-1&#x3b1; stabilization in response to Ang II (<xref ref-type="bibr" rid="B181">Wolf, 2005</xref>; <xref ref-type="bibr" rid="B93">Liu et&#x20;al., 2014</xref>). Understanding the roles of AT<sub>1</sub>R and AT<sub>2</sub>R HIF-1&#x3b1; cell signals in CKD requires further&#x20;study.</p>
<p>The von Hippel-Lindau tumor suppressor (VHL) is an E3 Ubiquitin Ligase Which Ubiquitylates and targets the &#x3b1;-subunit of HIFs for oxygen-dependent proteolysis (<xref ref-type="bibr" rid="B60">Haase, 2009</xref>). Deletion of the <italic>VHL</italic> gene or increased production of HIF-2&#x3b1; in mouse podocytes leads to rapidly progressive glomerulonephritis that can be prevented by targeted deletion of the <italic>ARNT</italic> gene (<xref ref-type="bibr" rid="B39">Ding et&#x20;al., 2013</xref>). Understanding whether AHR functions in the absence of ARNT in these cells may not only offer insight to the functions of podocytes, but also mechanisms in NAD metabolism, particularly since ARNT is a factor in both NAD salvage and <italic>de novo</italic> biosynthesis pathways.</p>
<p>The HIF-2&#x3b1;: ARNT heterodimer activates the transcription of nicotinamide phosphoribosyltransferase (NAMPT/visfatin) (<xref ref-type="bibr" rid="B167">Sun et&#x20;al., 2020</xref>), the rate limiting enzyme in the NAD salvage pathway (<xref ref-type="bibr" rid="B54">Garten et&#x20;al., 2015</xref>). Plasma levels of NAMPT are negatively correlated with glomerular filtration rate in nondiabetic hypertensive patients (<xref ref-type="bibr" rid="B67">Hsu et&#x20;al., 2016</xref>), chronic glomerulonephritis patients, and diabetic nephropathy patients (<xref ref-type="bibr" rid="B8">Axelsson et&#x20;al., 2007</xref>). As a cytokine, NAMPT promotes the production of inflammatory mediators, upregulates the expression of adhesion receptors and induces endothelial dysfunction (<xref ref-type="bibr" rid="B149">Romacho et&#x20;al., 2013</xref>). Inside the cell, NAMPT catalyzes the production of nicotinamide mononucleotide (NMN) (<xref ref-type="bibr" rid="B54">Garten et&#x20;al., 2015</xref>) (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). In HK-2 cells exposed to 1&#xa0;mM hydrogen peroxide plus 1% oxygen, NMN increased cell viability and reduced collagen IV protein production. Similar results were obtained in a murine ischemia-reperfusion injury model, manifesting reduced tubular DNA damage, cellular injury, and fibrosis in response to intraperitoneal NMN therapy (<xref ref-type="bibr" rid="B77">Jia et&#x20;al., 2021</xref>). These data suggest that neutralizing extracellular NAMPT or activating intracellular NAMPT production of NMN may be therapeutic strategies in treating&#x20;CKD.</p>
<p>The AHR: ARNT heterodimer promotes the transcription of indoleamine 2,3- dioxygenase (IDO1) (<xref ref-type="bibr" rid="B15">Bessede et&#x20;al., 2014</xref>), the rate limiting enzyme in the NAD <italic>de novo</italic> biosynthesis pathway. This pathway catabolizes tryptophan into NAD through a series of enzymatic reactions, which are also part of the kynurenine pathway (<xref ref-type="bibr" rid="B147">Ralto et&#x20;al., 2020</xref>) (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). In a small study of CKD patients, plasma IDO1 activity level and its downstream metabolites (kynurenine, kynurenic-acid, quinolinic-acid) correlated with disease severity (<xref ref-type="bibr" rid="B154">Schefold et&#x20;al., 2009</xref>). This finding concurs with conclusions from a subsequent study correlating serum IDO1 and kynurenine levels with disease severity (<xref ref-type="bibr" rid="B10">Bao et&#x20;al., 2013</xref>). A meta-analysis indicates that the lower estimated glomerular filtration rate in these patients is associated with higher blood metabolite levels of tryptophan metabolites, including kynurenine, C-glycosyltryptophan (glycosylated amino acid), 3-indoxyl sulfate, and indole-3-lactate (<xref ref-type="bibr" rid="B27">Cheng et&#x20;al., 2020</xref>). Each of these studies demonstrate an increase in the production of AHR ligands and a decrease in the production of NAD from the <italic>de novo</italic> biosynthesis pathway.</p>
<p>Quinolinate phosphoribosyltransferase (QPRT) is the final enzyme in the <italic>de novo</italic> biosynthesis pathway (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). In QPRT<sup>&#x2b;/&#x2212;</sup>mice, lower levels of NAD in the kidney and higher urinary levels of quinolinate are identified. In response to renal ischemia-reperfusion injury in wild-type mice, kidney QRPT expression levels are reduced and urinary quinolinate levels are elevated. These models were supplemented with intraperitoneal injections of 400&#xa0;mg/kg nicotinamide, which ameliorated kidney function (<xref ref-type="bibr" rid="B143">Poyan Mehr et&#x20;al., 2018</xref>), presumably through the production of NAD in the salvage pathway (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>). In a small study of patients with COVID-19-related acute kidney injury, 1&#xa0;g oral nicotinamide/day over 7&#xa0;days, reduced mortality and renal replacement therapy, highlighting a potential therapeutic function in promoting NAD via the salvage pathway (<xref ref-type="bibr" rid="B146">Raines et&#x20;al., 2021</xref>). Because a primary AHR-induced gene and regulator, TIPARP, also requires NAD for full activation (<xref ref-type="bibr" rid="B193">Zhang L. et&#x20;al., 2020</xref>), further exploration of TIPARP in CKD progression may provide insight into the therapeutic functions of intracellular&#x20;NAD.</p>
</sec>
<sec id="s10">
<title>The TGF-&#x03b2;1 Pathway and AHR</title>
<p>AHR is an integral regulator of extracellular matrix assembly and remodeling. AHR competition with HIF-1&#x3b1; for ARNT may be a mechanism which antagonizes three pro-fibrotic processes: hypoxia induction of TGF-&#x3b2;1, leading to suppressed collagen expression (<xref ref-type="bibr" rid="B114">Mingyuan et&#x20;al., 2018</xref>); hypoxia-induced collagen prolyl hydroxylases (P4HA1 and P4HA2) required for collagen maturation and deposition (<xref ref-type="bibr" rid="B56">Gilkes et&#x20;al., 2013</xref>); and hypoxia-induced enzymes (<italic>e.g.</italic>, LOX, transglutaminases, lysyl hydroxylases) involved in collagen cross-linking (<xref ref-type="bibr" rid="B33">Curran and Keely, 2013</xref>; <xref ref-type="bibr" rid="B56">Gilkes et&#x20;al., 2013</xref>). The mechanisms by which ligand activated AHR inhibits alpha-smooth muscle actin and collagen I expression and promotes MMP-1 expression are not fully known but may involve AHR crosstalk with various signaling pathways (<xref ref-type="bibr" rid="B140">Poormasjedi-Meibod et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B158">Shi et&#x20;al., 2020</xref>).</p>
<p>Two key signaling pathways in renal fibrosis include the TGF-&#x3b2;1 pathway and the NF-&#x3ba;B pathway, which can also exhibit crosstalk between each other and with AHR. TGF-&#x3b2;1, &#x3b2;2 and &#x3b2;3 initiate cell signals through activation of TGF-&#x3b2; receptor (T&#x3b2;R)-I and T&#x3b2;RII heterodimers. T&#x3b2;RII phosphorylates T&#x3b2;RI, which recruits and phosphorylates signaling transducer molecules. These receptor-regulated SMADs (<italic>e.g.,</italic> SMAD2, SMAD3) co-localize with the common partner SMAD (SMAD4) prior to localizing to the nucleus and binding to target genes (<xref ref-type="bibr" rid="B26">Chen et&#x20;al., 2018</xref>). SMAD3 also strongly interacts with both AHR and ARNT and promotes dissociation between AHR and ARNT, inhibiting AHR signals (<xref ref-type="bibr" rid="B120">Nakano et&#x20;al., 2020</xref>).</p>
<p>SMAD7 is an inhibitor SMAD that is activated by TGF-&#x3b2; signaling, providing negative-feedback. SMAD7 is recruited to T&#x3b2;RI and prevents receptor-regulated SMAD docking and phosphorylation. SMAD7 also recruits E3 ubiquitin ligases to degrade T&#x3b2;RI, SMAD2 and SMAD3, creating a regulatory feedback loop in TGF-&#x3b2; signaling (<xref ref-type="bibr" rid="B26">Chen et&#x20;al., 2018</xref>).</p>
<p>The RAAS pathway is integrated with the TGF-&#x3b2; cell signal pathway. In an animal model involving Ang II-induced renal fibrosis, Smad7 knockout mice exhibit elevated TGF-&#x3b2;/Smad3 signaling, more severe renal injury and increased progressive fibrosis compared to the wild-type (<xref ref-type="bibr" rid="B94">Liu et&#x20;al., 2013</xref>). However, in Smad3 knockout mice, Ang-II-induced renal fibrosis and NF-&#x3ba;B-driven renal inflammation was significantly lower compared to the wild-type (<xref ref-type="bibr" rid="B97">Liu et&#x20;al., 2012b</xref>), highlighting functions of Ang II in promoting TGF-&#x3b2; cell signals.</p>
<p>Moreover, in mice with unilateral ureteral obstruction nephropathy, deletion of ACE2 results in a fourfold increase in the ratio of intrarenal Ang II/Ang 1-7, which was associated with increased tubulointerstitial fibrosis and inflammation (<xref ref-type="bibr" rid="B96">Liu et&#x20;al., 2012a</xref>). Subsequent mechanistic studies in Ace2 knockout mice subjected to chronic subcutaneous angiotensin II infusion revealed an increase in Smad-specific E3 ubiquitin protein ligase 2 (SMURF2), a decrease in renal SMAD7, and increased TGF-&#x3b2; and NF-&#x3ba;B (<xref ref-type="bibr" rid="B95">Liu et&#x20;al., 2017</xref>).</p>
<p>Because ACE2 is not known to directly transduce signals, a product of ACE2 activity, Ang (1&#x2013;7), may function in the regulation of TGF-&#x3b2; cell signaling. Ang (1&#x2013;7) binds the AT<sub>2</sub>R and the Mas receptor (<xref ref-type="bibr" rid="B35">Curran et&#x20;al., 2020</xref>). The AT<sub>2</sub>R agonist, CGP42112A, promotes AT<sub>2</sub>R co-localization with T&#x3b2;RII for subsequent T&#x3b2;RII degradation (<xref ref-type="bibr" rid="B59">Guo et&#x20;al., 2016</xref>). Possibly, Ang (1&#x2013;7) activation of AT<sub>2</sub>R also induces the production of SMAD7. Because AHR induces ACE2 production (<xref ref-type="bibr" rid="B103">Lv et&#x20;al., 2021</xref>) AHR may play a role in each of these responses (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>).</p>
</sec>
<sec id="s11">
<title>The NF-KB Pathway and AHR</title>
<p>AHR interacts with both the canonical and non-canonical NF-&#x3ba;B pathways. The NF-&#x3ba;B transcription factor family consists of five proteins: p65 (RelA), RelB, c-Rel, p105/p50 (NF-&#x3ba;B1), and p100/p52 (NF-&#x3ba;B2). NF-&#x3ba;B1 and NF-&#x3ba;B2 are produced as inactive precursors, p105 and p100, respectively. RelB additionally associates with p100. Cell signals induce proteolytic processing of the inactive precursors, generating functional subunits p50 and p52. The Rel proteins, p65 and c-Rel, are similarly bound to inhibitory protein kinases (<italic>e.g.,</italic> I&#x3ba;B&#x3b1;, I&#x3ba;B&#x3b2; and I&#x3ba;B&#x3b5;). Cell signal-induced phosphorylation of inhibitory kinases targets the kinases for degradation and release p65 or c-Rel. The various NF-&#x3ba;B proteins form transcriptionally active homo- and heterodimeric complexes. The p65 transcription factor most commonly associates with p50 but can also form homodimers or associate with c-Rel and p52. RelB is only known to form heterodimers with either p50 or p52. The canonical pathway involves the activation of p65/p50 whereas the non-canonical pathway involves RelB (<xref ref-type="bibr" rid="B63">Hayden and Ghosh, 2004</xref>; <xref ref-type="bibr" rid="B131">Oeckinghaus and Ghosh, 2009</xref>). In mouse embryonic fibroblasts, p65 and RelB exhibit negative crosstalk (<xref ref-type="bibr" rid="B109">Marienfeld et&#x20;al., 2003</xref>; <xref ref-type="bibr" rid="B74">Jacque et&#x20;al., 2005</xref>) and in mouse kidney fibroblasts, RelB suppresses the production of TNF (<xref ref-type="bibr" rid="B184">Xia et&#x20;al., 1999</xref>), which is a common mediator in CKD (<xref ref-type="bibr" rid="B163">Stenvinkel et&#x20;al., 2021</xref>) (<xref ref-type="fig" rid="F5">Figure&#x20;5</xref>).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Regulation of NF-&#x3ba;B in CKD. (1) Common NF-&#x3ba;B dimer pairs include p65/RelA and p50 in the canonical pathway and RelB and p52 in the non-canonical pathway. Non-canonical cell signals may antagonize canonical cell signals in fibroblasts. (2) AHR dimerizes with RelB in the production of IL-8. AHR or PPAR-&#x3b3; activation promotes ubiquitination and degradation of p65/RelA. (3) Estrogen activates estrogen receptors (ER-&#x3b1;/&#x3b2;) to produce the NF-&#x3ba;B inhibitor, I&#x3ba;B&#x3b1;, and promotes the recruitment of ER-&#x3b2; to p65 binding sites, which blocks p65 transcriptional activity. (4) Heat shock protein (HSP)-90 is a chaperone shared by ER-&#x3b1;/&#x3b2;, PPAR-&#x3b3;, AHR, and canonical NF-&#x3ba;B. (5) Elevated levels of p65/RelA, RelB, and HSP90 are found in CKD patient&#x20;serum.</p>
</caption>
<graphic xlink:href="fphar-13-782199-g005.tif"/>
</fig>
<p>In the canonical NF-&#x3ba;B pathway, dioxin-activated AHR promotes p65 ubiquitination for degradation by either the proteasome or lysosome in mouse peritoneal macrophages, (<xref ref-type="bibr" rid="B40">Dominguez-Acosta et&#x20;al., 2018</xref>). AHR also promotes the degradation of ER-&#x3b1; (<xref ref-type="bibr" rid="B101">Luecke-Johansson et&#x20;al., 2017</xref>) and PPAR-&#x3b3; (<xref ref-type="bibr" rid="B41">Dou et&#x20;al., 2019</xref>), which are both involved in p65 inhibition. Specifically, PPAR-&#x3b3; promotes p65 ubiquitination for targeted proteasome degradation (<xref ref-type="bibr" rid="B66">Hou et&#x20;al., 2012</xref>) whereas estrogen induces the production of the NF-&#x3ba;B inhibitor, I&#x3ba;B&#x3b1;, and promotes the recruitment of ER-&#x3b2; to p65 binding sites, which blocks p65 transcriptional activity (<xref ref-type="bibr" rid="B187">Xing et&#x20;al., 2012</xref>) (<xref ref-type="fig" rid="F5">Figure&#x20;5</xref>). Because animal models of glomerulosclerosis treated with 17&#x3b2;-estradiol (<xref ref-type="bibr" rid="B108">Maric et&#x20;al., 2004</xref>) or pioglitazone (<xref ref-type="bibr" rid="B122">Nemeth et&#x20;al., 2019</xref>) exhibit reduced tubulointerstitial fibrosis, estrogen and PPAR-&#x3b3; cell signals may regulate CKD pathogenesis by inhibiting canonical NF-&#x3ba;B signaling.</p>
<p>A common factor in ER-&#x3b1;/&#x3b2; (<xref ref-type="bibr" rid="B142">Powell et&#x20;al., 2010</xref>), PPAR-&#x3b3; (<xref ref-type="bibr" rid="B125">Nguyen et&#x20;al., 2013</xref>) and AHR (<xref ref-type="bibr" rid="B161">Soshilov and Denison, 2011</xref>) cell signaling is heat shock protein (HSP)-90. This chaperone contributes to the stabilization of I&#x3ba;B kinase (IKK), which is needed for the dissociation of I&#x3ba;B from NF-&#x3ba;B (<xref ref-type="bibr" rid="B130">O&#x2019;Neill et&#x20;al., 2015</xref>). In chronic glomerulonephritis patients, serum levels of HSP90 and NF-&#x3ba;B are higher than those in healthy individuals. (<xref ref-type="bibr" rid="B25">Chebotareva et&#x20;al., 2020</xref>). The HSP90 inhibitor, geldanamycin, significantly suppresses angiotensin II-induced p65 nuclear translocation in cardiac cells (<xref ref-type="bibr" rid="B87">Lee et&#x20;al., 2010</xref>) and in a murine renal ischemia-reperfusion injury model, pre-treatment with the HSP90 inhibitor, AT13387, improved renal function compared to controls (<xref ref-type="bibr" rid="B130">O&#x27;Neill et&#x20;al., 2015</xref>). Understanding the potential competition for HSP90 in the ER-&#x3b1;/&#x3b2;, PPAR-&#x3b3;, NF-&#x3ba;B, and AHR pathways may help in identifying novel therapeutics for CKD (<xref ref-type="fig" rid="F5">Figure&#x20;5</xref>).</p>
<p>In the non-canonical NF-&#x3ba;B pathway, dioxin-activated AHR can dimerize with RelB and promote IL-8 production in U937 macrophages. RelB:AHR complexes bind RelB:p52 response elements as well as AHR response elements (<xref ref-type="bibr" rid="B175">Vogel et&#x20;al., 2007</xref>), highlighting the complexity of AHR in the non-canonical pathway. RelB is expressed in renal tubular epithelial cells and levels gradually increase with progressive fibrosis in a mouse renal fibrosis model with unilateral ureteral obstruction. RelB immunohistochemical staining in renal tubular epithelial cells was also positively correlated with the intensity of kidney fibrosis in biopsy specimens in a study of 34 CKD patients. Interestingly, the serum RelB levels from CKD patients also correlated with the intensity of renal fibrosis compared healthy controls (<xref ref-type="bibr" rid="B164">Sun D. et&#x20;al., 2021</xref>). This dysregulated RelB response may also reflect changes in AHR cell signals that regulate fibrosis. Further investigation of RelB:AHR initiated cell signals, particularly in response to uremic AHR ligands, may offer insight into CKD pathogenesis.</p>
</sec>
<sec sec-type="conclusion" id="s12">
<title>Conclusion</title>
<p>AHR is a pleotropic cell signaling molecule with diverse ligand-specific functions. The elevated levels of uremic solutes that act as AHR ligands during the progression of CKD highlight the significance of AHR activity in these diseases. AHR contributes to the biotransformation of molecules in the clearance of xenobiotics, and these processes deserve further exploration in kidney pathophysiology. AHR competition with HIF-1&#x3b1; for binding to ARNT in pro-inflammatory and anaerobic responses, together with AHR antagonism of TGF-&#x3b2;1 cell signaling in fibrogenesis, support potential targeting of AHR to slow CKD progression. In the NAD <italic>de novo</italic> biosynthesis pathway, AHR stimulates RNA expression and protein production of the rate-limiting enzyme, IDO1, and binds molecules along this pathway that accumulate in CKD. NAD is required for the activity of TIPARP, which is involved in the recruitment of an E3 ligase for ubiquitin-mediated proteasome degradation of AHR. It is possible that the extracellular release of kynurenine and NAMPT, rather than intracellular metabolic catabolism of these molecules into NAD, alters the functions of AHR in CKD. Further investigation of AHR regulation of ACE2 and the downstream effects of the ACE2 cleavage product, Ang-(1&#x2013;7), on Mas and AT<sub>2</sub>R may identify novel therapeutic targets in hypertension and fibrosis. Because each of these AHR functions may be regulated by crosstalk with ER-&#x3b1;, PPAR-&#x3b3;, or NF-&#x3ba;B subunits, a more refined assessment of the binding affinity and availability of HSP90 in these cell signaling pathways during CKD is warranted.</p>
</sec>
</body>
<back>
<sec id="s13">
<title>Author Contributions</title>
<p>Wrote or contributed to the writing of the manuscript: CC and JK. Illustrations: CC. Developed tables: CC and&#x20;JK.</p>
</sec>
<sec id="s14">
<title>Funding</title>
<p>This work was supported in part by the National Institute of Diabetes and Digestive and Kidney Diseases Intramural Research Program and the National Institutes of Health Clinical Center.</p>
</sec>
<sec sec-type="COI-statement" id="s15">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s16">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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