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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Pharmacol.</journal-id>
<journal-title>Frontiers in Pharmacology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Pharmacol.</abbrev-journal-title>
<issn pub-type="epub">1663-9812</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">1064472</article-id>
<article-id pub-id-type="doi">10.3389/fphar.2022.1064472</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Pharmacology</subject>
<subj-group>
<subject>Mini Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Exploring the chemotherapeutic potential of currently used kinase inhibitors: An update</article-title>
<alt-title alt-title-type="left-running-head">Naik and Shakya</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fphar.2022.1064472">10.3389/fphar.2022.1064472</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Naik</surname>
<given-names>Rajashri R.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1206653/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Shakya</surname>
<given-names>Ashok K.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1066068/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Faculty of Allied Medical Sciences</institution>, <institution>Pharmacological and Diagnostic Research Center</institution>, <institution>Al-Ahliyya Amman University</institution>, <addr-line>Amman</addr-line>, <country>Jordan</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Faculty of Pharmacy</institution>, <institution>Pharmacological and Diagnostic Research Center</institution>, <institution>Al-Ahliyya Amman University</institution>, <addr-line>Amman</addr-line>, <country>Jordan</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/823285/overview">Muthupandian Saravanan</ext-link>, Saveetha Dental College And Hospitals, India</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1161079/overview">Surya Amarachintha</ext-link>, Georgia Southwestern State University, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Ashok K. Shakya, <email>ashokkumar2811@gmail.com</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Pharmacology of Anti-Cancer Drugs, a section of the journal Frontiers in Pharmacology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>09</day>
<month>01</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>13</volume>
<elocation-id>1064472</elocation-id>
<history>
<date date-type="received">
<day>08</day>
<month>10</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>28</day>
<month>11</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Naik and Shakya.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Naik and Shakya</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Protein kinases are enzymes that transfer phosphate to protein, resulting in the modification of the protein. The human genome encodes approximately 538 kinases. Kinases play a role in maintaining a number of cellular processes, including control of the cell cycle, metabolism, survival, and differentiation. Protein kinase dysregulation causes several diseases, and it has been shown that numerous kinases are deregulated in cancer. The oncogenic potential of these kinases is increased by a number of processes, including overexpression, relocation, fusion point mutations, and the disruption of upstream signaling. Understanding of the mechanism or role played by kinases has led to the development of a large number of kinase inhibitors with promising clinical benefits. In this review, we discuss FDA-approved kinase inhibitors and their mechanism, clinical benefits, and side effects, as well as the challenges of overcoming some of their side effects and future prospects for new kinase inhibitor discovery.</p>
</abstract>
<kwd-group>
<kwd>FDA</kwd>
<kwd>cancer kinase inhibitors</kwd>
<kwd>BCR-ABL</kwd>
<kwd>EGFR</kwd>
<kwd>BRAF</kwd>
<kwd>MEK</kwd>
<kwd>ALK</kwd>
<kwd>BTK inhibitor</kwd>
</kwd-group>
<contract-sponsor id="cn001">Al-Ahliyya Amman University<named-content content-type="fundref-id">10.13039/501100016299</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Kinases are enzymes that transfer the phosphate group from ATP to a specific substrate during phosphorylation. Depending on the nature of the chemical, the kinases involved may be protein kinases, lipid kinases, carbohydrate kinases, nucleophosphate kinases, or nucleoside diphosphate kinases. The phosphorylatable sites in eukaryotes include serine (ser) threonine (Thr), and tyrosine (tyr) (<xref ref-type="bibr" rid="B1">Adam and Hunter, 2018</xref>). Other amino acids that are phosphorylatable include arginine (Arg), Lysine (Lys), and cysteine (Cys) (<xref ref-type="bibr" rid="B13">Ciesla et al., 2011</xref>). Phosphorylation alters the substrate&#x2019;s functionality by controlling the signaling pathway through cellular location, amplification, or interactions with regulatory proteins. In the human genome, protein kinases account for approximately 2% of the genetic material. These kinases are further classified into groups, families, and subfamilies (<xref ref-type="bibr" rid="B66">Manning et al., 2002a</xref>; <xref ref-type="bibr" rid="B67">Manning et al., 2002b</xref>). More than 500 protein kinases have been identified and their conformational changes and structure have been identified using x-ray crystallography. Protein kinases play a vital role in various cellular functions, such as metabolism, cell cycle regulation, cell survival, and cell differentiation. The target proteins undergo conformational changes as a result of the kinases&#x2019; activation, which include the phosphorylation of substrates (amino acids) such as serine, threonine, and tyrosine (<xref ref-type="bibr" rid="B44">Johnson and Lewis, 2001</xref>). The process of phosphorylation by kinase on the substrate (target proteins) is a controlled process, and any changes in the regulatory processes leads to disease. There are several mechanisms that lead to kinase dysregulation, such as overexpression, fusion point mutation, and dysregulation of signaling pathway, and these all increase the oncogenic capabilities of the kinases. Deregulation can lead to altered expression of a kinase and change its function, as well as affect its initiation and survival. One example of deregulation is BRAF, a proto-oncogene mutant that encodes serine/threonine protein kinase B-Raf and is found in 40%&#x2013;50% of melanoma cases (<xref ref-type="bibr" rid="B18">Dankner et al., 2018</xref>). V600E is the mutation in BRAF that makes MAPK (mitogen-activated protein kinase) constitutively active, resulting in enhanced cell proliferation of the cell (<xref ref-type="bibr" rid="B97">&#x15a;miech et al., 2020</xref>). Epidermal Growth Factor Receptor (EGFR) is another oncogene that belongs to the ErbB family of tyrosine kinases. Mutation in EGFR and overexpression of EGFR protein leads to the dysregulation of signals that favor tumor cells in terms of proliferation, survival, and metastasis (<xref ref-type="bibr" rid="B102">Thomas and Weihua, 2019</xref>).</p>
</sec>
<sec id="s2">
<title>Kinase inhibitors for cancer treatment</title>
<p>The development of small molecules to target kinases has significantly increased due to the success of imatinib, the first tyrosine kinase inhibitor, which targeted the Bcr-Abl receptor. Since its discovery 20&#xa0;years ago, large numbers of small-molecule kinase inhibitors have been developed to treat cancer. It was the first tyrosine kinase inhibitor to be approved by the US FDA (in 2001) for treating chronic myelogenous leukemia. In this review, we will discuss the different types of KI, examples of FDA-approved kinase inhibitors, some of the clinical trials that led to their approval, their side effects, and their limitations. Finally, we will emphasize how some of these limitations can be overcome by understanding the mechanism that leads to resistance.</p>
</sec>
<sec id="s3">
<title>Types of kinase inhibitors in cancer therapy</title>
<p>There are many kinase inhibitors (<xref ref-type="table" rid="T1">Tables 1</xref>&#x2013;<xref ref-type="table" rid="T3">Tables 3</xref>), which depending on their mode of target binding and mechanism of action can be divided into seven types. The different types of inhibitor, along with an example and mode of action, are summarized in <xref ref-type="table" rid="T4">Table 4</xref>.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Chemical structures of tyrosine kinase inhibitors used in chemotherapy.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Name (alphabetical order)</th>
<th align="left">Chemical structure</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Afatinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx1.tif"/>
</td>
</tr>
<tr>
<td align="left">Axitinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx2.tif"/>
</td>
</tr>
<tr>
<td align="left">Bosutinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx3.tif"/>
</td>
</tr>
<tr>
<td align="left">Cobimetinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx4.tif"/>
</td>
</tr>
<tr>
<td align="left">Crizotinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx5.tif"/>
</td>
</tr>
<tr>
<td align="left">Dacomitinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx6.tif"/>
</td>
</tr>
<tr>
<td align="left">Dasatinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx7.tif"/>
</td>
</tr>
<tr>
<td align="left">Erlotinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx8.tif"/>
</td>
</tr>
<tr>
<td align="left">Everolimus</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx9.tif"/>
</td>
</tr>
<tr>
<td align="left">Gefitinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx10.tif"/>
</td>
</tr>
<tr>
<td align="left">Ibrutinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx11.tif"/>
</td>
</tr>
<tr>
<td align="left">Imatinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx12.tif"/>
</td>
</tr>
<tr>
<td align="left">Lenvatinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx13.tif"/>
</td>
</tr>
<tr>
<td align="left">Neratinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx14.tif"/>
</td>
</tr>
<tr>
<td align="left">Nilotinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx15.tif"/>
</td>
</tr>
<tr>
<td align="left">Pazopanib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx16.tif"/>
</td>
</tr>
<tr>
<td align="left">Ponatinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx17.tif"/>
</td>
</tr>
<tr>
<td align="left">Ruxolitinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx18.tif"/>
</td>
</tr>
<tr>
<td align="left">Sorafenib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx19.tif"/>
</td>
</tr>
<tr>
<td align="left">Sunitinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx20.tif"/>
</td>
</tr>
<tr>
<td align="left">Tacrolimus</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx21.tif"/>
</td>
</tr>
<tr>
<td align="left">Temsirolimus</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx22.tif"/>
</td>
</tr>
<tr>
<td align="left">Trametinib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx23.tif"/>
</td>
</tr>
<tr>
<td align="left">Vemurafenib</td>
<td align="left">
<inline-graphic xlink:href="FPHAR_fphar-2022-1064472_wc_tfx24.tif"/>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Therapeutic uses of FDA-approved kinase inhibitors.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">S.N.</th>
<th align="left">Name and type</th>
<th align="left">Inhibitor</th>
<th align="left">Therapeutic use</th>
<th align="left">FDA approval</th>
<th align="left">References</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1</td>
<td align="left">Dasatinib type I</td>
<td align="left">Bcr-Abl, c-Kit, PDGFRA B, ephrin, Src kinases</td>
<td align="left">Ph-positive CML. It is resistant to the other Bcr-Abl inhibitors</td>
<td align="left">FDA approved</td>
<td align="left">
<xref ref-type="bibr" rid="B46">Kantarjian et al. (2009)</xref>
</td>
</tr>
<tr>
<td align="left">2</td>
<td align="left">Bosutinib type 1</td>
<td align="left">Src &#x2013;Abl kinase</td>
<td align="left">Newly diagnosed CML</td>
<td align="left">FDA December 2017</td>
<td align="left">
<xref ref-type="bibr" rid="B15">Cortes et al. (2018)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">3</td>
<td rowspan="2" align="left">Crizotinib</td>
<td rowspan="2" align="left">c met, ALK tyrosine kinase</td>
<td rowspan="2" align="left">EML4-ALK fusion gene-positive NSCLC and ROS1 gene rearrangement-positive NSCLC</td>
<td align="left">FDA approved 2011</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B55">Lim et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">FDA approved 2016</td>
</tr>
<tr>
<td align="left">4</td>
<td align="left">Gefitinib</td>
<td align="left">EFGRs</td>
<td align="left">Against non-small cell lung cancer</td>
<td align="left">FDA approved 2003</td>
<td align="left">
<xref ref-type="bibr" rid="B70">Molina et al. (2008)</xref>
</td>
</tr>
<tr>
<td align="left">5</td>
<td align="left">Erlotinib</td>
<td align="left">EFGRs</td>
<td align="left">Against non-small cell lung cancer</td>
<td align="left">FDA approved 2004</td>
<td align="left">
<xref ref-type="bibr" rid="B70">Molina et al. (2008)</xref>
</td>
</tr>
<tr>
<td align="left">6</td>
<td align="left">Sunitinib</td>
<td align="left">VEGFR, VEGFR2, PDGFR&#x3b2;, KIT, RET, CSF1R, and FLT3</td>
<td align="left">Imatinib-resistant GIST, adjuvant therapy in adult patients at high risk of RCC following nephrectomy</td>
<td align="left">FDA approved 2006</td>
<td align="left"/>
</tr>
<tr>
<td rowspan="2" align="left">7</td>
<td rowspan="2" align="left">Lapatinib</td>
<td rowspan="2" align="left">EGFR, HER2 TKI</td>
<td rowspan="2" align="left">Patients with a combination of HER2-positive advanced and metastatic breast cancer with letrozole as a first-line agent, treatment of patients with HER2-positive advanced breast cancer</td>
<td align="left">FDA approved 2007</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B10">Cameron and Stein, (2008)</xref>
</td>
</tr>
<tr>
<td align="left">FDA approved 2010</td>
</tr>
<tr>
<td rowspan="2" align="left">8</td>
<td rowspan="2" align="left">Pazopanib</td>
<td rowspan="2" align="left">VEGFR, PDGFR (A and B), c-Kit, and FGFR</td>
<td rowspan="2" align="left">Metastatic RCC and treatment of advanced-stage soft tissue sarcoma</td>
<td align="left">FDA approved 2009</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B100">Sternberg et al. (2010)</xref>
</td>
</tr>
<tr>
<td align="left">FDA approved 2012</td>
</tr>
<tr>
<td rowspan="2" align="left">9</td>
<td rowspan="2" align="left">Ruxolitinib</td>
<td rowspan="2" align="left">JAK2, Janus kinase family (a non-receptor TK)</td>
<td rowspan="2" align="left">For intermediate to high-risk MF. Hydroxyurea-resistant or -intolerant PV; intermediate to high risk of MK; hydroxyurea-resistant or -intolerant PV</td>
<td align="left">FDA approved 2011</td>
<td rowspan="2" align="left">(<xref ref-type="bibr" rid="B43">James et al. (2005)</xref>, <xref ref-type="bibr" rid="B51">Kralovics et al., (2005)</xref>
</td>
</tr>
<tr>
<td align="left">FDA approved 2014</td>
</tr>
<tr>
<td align="left">10</td>
<td align="left">Vemurafenib</td>
<td align="left">BRAF kinase inhibitor</td>
<td align="left">For patients with BRAF mutant V600E metastatic melanoma</td>
<td align="left">FDA approved 2011</td>
<td align="left">
<xref ref-type="bibr" rid="B11">Chapman et al. (2011)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">11</td>
<td rowspan="2" align="left">Imatinib type II</td>
<td rowspan="2" align="left">Bcr-Abl kinase</td>
<td rowspan="2" align="left">As the first line therapy in the treatment of chronic CML. Rare hematologic malignancies and proto-oncogene c-Kit- or tyrosine-protein kinase kit (c-Kit)-mutated GIST</td>
<td align="left">FDA approved</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B22">Druker et al. (2001)</xref>, <xref ref-type="bibr" rid="B49">Kantarjian et al. (2012)</xref>
</td>
</tr>
<tr>
<td align="left">FDA approved 2008</td>
</tr>
<tr>
<td align="left">12</td>
<td align="left">Nilotinib</td>
<td align="left">Bcr-Abl kinase inhibitor</td>
<td align="left">As a front-line therapy for patients with chronic-stage CML and in patients who have developed resistance or are intolerant to imatinib</td>
<td align="left">FDA approved</td>
<td align="left">
<xref ref-type="bibr" rid="B109">Weisberg et al. (2005)</xref>
</td>
</tr>
<tr>
<td align="left">13</td>
<td align="left">Sorafenib</td>
<td align="left">VEGFR TKIs, VEGFRs, PDGFRs, and FLT3R</td>
<td align="left">For the treatment of metastatic renal cell carcinoma. Second-line agent for treating patients with metastatic RCC. For HCC. For metastatic thyroid cancer</td>
<td align="left">FDA approved 2005, 2007, 2013</td>
<td align="left">
<xref ref-type="bibr" rid="B25">Escudier et al. (2007)</xref>, <xref ref-type="bibr" rid="B26">Escudier et al. (2009)</xref>, <xref ref-type="bibr" rid="B7">Brose et al. (2014)</xref>
</td>
</tr>
<tr>
<td align="left">14</td>
<td align="left">Ponatinib</td>
<td align="left">Binds to T315I mutant kinases</td>
<td align="left">For patients with chronic-phase myeloid leukemia who are resistant or intolerant to at least two prior kinase inhibitors</td>
<td align="left">FDA in 2014 narrowed down the recommended use for adult patients with T315I-positive CML or ALL patients</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Lipton et al. (2016)</xref>, <xref ref-type="bibr" rid="B75">Nicolini et al. (2017)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">15</td>
<td rowspan="2" align="left">Trametinib Type III</td>
<td rowspan="2" align="left">MEK inhibitor</td>
<td rowspan="2" align="left">For the treatment of BRAF-mutated V600E metastatic melanoma. Combination of trametinib with dabrafenib as a first-line therapy. BARF V600E-mutated metastatic melanoma</td>
<td align="left">FDA approved 2013</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B79">Odogwu et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">FDA approved 2014</td>
</tr>
<tr>
<td align="left">16</td>
<td align="left">Cobimetinib</td>
<td align="left">Inhibitor of MEK</td>
<td align="left">Combination of vemurafenib (BRAF inhibitor) and MEK inhibitor cobimetinib for treating patients with mutant BRAF V600E metastatic melanoma</td>
<td align="left">FDA approved</td>
<td align="left">
<xref ref-type="bibr" rid="B24">Eroglu and Ribas, (2016)</xref>
</td>
</tr>
<tr>
<td rowspan="4" align="left">17</td>
<td rowspan="4" align="left">Afatinib type VI</td>
<td align="left">EGFR TK</td>
<td rowspan="4" align="left">Used as a first-line therapy in patients with NSCLC. Second-line therapy in patients with advanced squamous cell carcinoma</td>
<td rowspan="4" align="left">FDA approved</td>
<td rowspan="4" align="left">
<xref ref-type="bibr" rid="B99">Soria et al. (2015)</xref>, <xref ref-type="bibr" rid="B110">Wind et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">ErbB group</td>
</tr>
<tr>
<td align="left">HER 2, HER4</td>
</tr>
<tr>
<td align="left">T790M mutation of EGFR, and wild-type EGFR</td>
</tr>
<tr>
<td align="left">18</td>
<td align="left">Dacomitinib</td>
<td align="left">EGFR kinase inhibitor</td>
<td align="left">As the first-line therapy for patients with metastatic NSCLC and EGFR exon 19 deletion (Del19) or exon 21 L852R substitution mutation</td>
<td align="left">FDA approved 27 September 2018</td>
<td align="left">
<xref ref-type="bibr" rid="B86">Reckamp et al. (2014)</xref>; <xref ref-type="bibr" rid="B112">Wu et al. (2017b)</xref>
</td>
</tr>
<tr>
<td align="left">19</td>
<td align="left">Neratinib</td>
<td align="left">EGFR tyrosine kinase</td>
<td align="left">As an adjuvant therapy in patients with early-stage HER2-positive breast cancer</td>
<td align="left">FDA approved</td>
<td align="left">
<xref ref-type="bibr" rid="B68">Martin et al. (2017)</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<table-wrap id="T3" position="float">
<label>TABLE 3</label>
<caption>
<p>Mechanism of action, results of clinical trials, and side effects of kinase inhibitors.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="center">S.No.</th>
<th align="center">Name</th>
<th align="center">Route of administration and MOA</th>
<th align="center">Clinical trial</th>
<th align="center">Side effects</th>
<th align="center">References</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1</td>
<td align="left">Dasatinib</td>
<td align="left">Oral, binds to active conformation of the kinase Bcr-Abl</td>
<td align="left">Multiple phase III trial. Effective cytogenic response</td>
<td align="left"/>
<td align="left">
<xref ref-type="bibr" rid="B14">Conchon et al. (2011)</xref>
</td>
</tr>
<tr>
<td align="left">2</td>
<td align="left">Bosutinib</td>
<td align="left">Oral</td>
<td align="left">Multinational phase III (BFORE). Higher efficiency in molecular and cytogenic response</td>
<td align="left">Diarrhea results in leftover level of liver enzymes. Cardiovascular toxicity uncommon</td>
<td align="left">
<xref ref-type="bibr" rid="B15">Cortes et al. (2018)</xref>, <xref ref-type="bibr" rid="B9">Brummendorf et al. (2022)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">3</td>
<td rowspan="2" align="left">Crizotinib</td>
<td rowspan="2" align="left">Oral</td>
<td align="left">Open-label phase II trial&#x2014;significant increase in the median PFS of 7.7 months (HR on progression death 49% and response rate 65%)</td>
<td rowspan="2" align="left">Vision disorders, nausea, vomiting, diarrhea, constipation, and elevated liver enzymes</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B96">Shaw et al. (2013)</xref>, <xref ref-type="bibr" rid="B98">Solomon et al. (2014)</xref>
</td>
</tr>
<tr>
<td align="left">Open-label phase III trial&#x2014;significantly improved median PFS of 10.9 months</td>
</tr>
<tr>
<td align="left">4</td>
<td align="left">Gefitinib</td>
<td align="left">Oral competitive antagonist that binds to the ATP site of EFGRs</td>
<td align="left">Clinical trial&#x2014;progression-free survival 10.8 months; survival mean 30.5 months</td>
<td align="left">Acne rash, nausea, diarrhea, anorexia, stomatitis, and dehydration</td>
<td align="left">
<xref ref-type="bibr" rid="B31">Forsythe and Faulkner, (2004)</xref>, <xref ref-type="bibr" rid="B74">Nakamura et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">5</td>
<td align="left">Erlotinib</td>
<td align="left">Oral competitive antagonist that binds to the ATP site of EFGRs</td>
<td align="left">PFS 13.1 months; overall survival 24.68 months</td>
<td align="left">High rates of severe skin rashes, diarrhea, nausea, and vomiting stomatitis</td>
<td align="left">(<xref ref-type="bibr" rid="B118">Zhou et al. (2011a)</xref>, <xref ref-type="bibr" rid="B114">Xiong et al. (2019)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">6</td>
<td rowspan="2" align="left">Sunitinib</td>
<td rowspan="2" align="left">Oral multi-target ATP competitive TKIs</td>
<td align="left">phase III randomized trial&#x2014;disease-free survival of 16.8 years</td>
<td rowspan="2" align="left">Grade 3 neutropenia, leukopenia, diarrhea, fatigue, nausea, hypertension, and hand-foot mouth syndrome</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B19">Demetri et al. (2006)</xref>, <xref ref-type="bibr" rid="B73">Motzer et al. (2007)</xref>, <xref ref-type="bibr" rid="B85">Ravaud et al. (2016)</xref>
</td>
</tr>
<tr>
<td align="left">Landmark phase III trial&#x2014;significantly longer PFS (11 months)</td>
</tr>
<tr>
<td rowspan="2" align="left">7</td>
<td rowspan="2" align="left">Lapatinib</td>
<td rowspan="2" align="left">Inhibits the activity of HER2 TK in HER2-positive breast cancer patients</td>
<td align="left">Phase III randomized open-label study&#x2014;median time to progression significantly increased to 8.4 months</td>
<td rowspan="2" align="left">Diarrhea (68%) and rash (46%). The cardiac side effect observed with trastuzumab was not observed with letrozole</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B32">Geyer et al., (2006)</xref>, <xref ref-type="bibr" rid="B92">Schwartzberg et al. (2010)</xref>
</td>
</tr>
<tr>
<td align="left">Double-blind controlled randomized phase III trial&#x2014;significantly prolonged PFS, overall response rate of 28%, clinical benefits at 48%</td>
</tr>
<tr>
<td rowspan="2" align="left">8</td>
<td rowspan="2" align="left">Pazopanib</td>
<td rowspan="2" align="left">Oral multi TK inhibitors</td>
<td align="left">Placebo-controlled randomized phase III trial&#x2014;PFS of 9.2 months</td>
<td rowspan="2" align="left">Diarrhea, change in hair color, and increase in liver enzymes</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B100">Sternberg et al. (2010)</xref>, <xref ref-type="bibr" rid="B27">Escudier et al. (2014)</xref>
</td>
</tr>
<tr>
<td align="left">Double-blind phase III trial (PISCES)&#x2014;70% preferred pazopanib</td>
</tr>
<tr>
<td align="left">9</td>
<td align="left">Ruxolitinib</td>
<td align="left">JAK2</td>
<td align="left">Phase III trials&#x2014;discontinuation rate was 30% and 50% for 3 and 5&#xa0;years, respectively</td>
<td align="left">Anemia, thrombocytopenia, and herpes zoster infection</td>
<td align="left">
<xref ref-type="bibr" rid="B38">Harrison et al. (2012)</xref>, <xref ref-type="bibr" rid="B106">Verstovsek et al. (2012)</xref>, <xref ref-type="bibr" rid="B105">Vannucchi et al. (2015)</xref>
</td>
</tr>
<tr>
<td align="left">10</td>
<td align="left">Vemurafenib</td>
<td align="left">BRAF inhibitor</td>
<td align="left">Landmark phase III randomized BRIM-3&#x2014;OS increased significantly by 84%, median PFS of 5.3&#xa0;months</td>
<td align="left"/>
<td align="left">
<xref ref-type="bibr" rid="B11">Chapman et al. (2011)</xref>
</td>
</tr>
<tr>
<td align="left">11</td>
<td align="left">Imatinib</td>
<td align="left">Kinase inhibitors against PDGFR</td>
<td align="left">Phase III international randomized study (IRIS)&#x2014;complete hematologic response of 95.3%, cytogenic response 85.2%</td>
<td align="left">Neutropenia, thrombocytopenia, anemia, elevated liver enzymes, and other drug-related adverse events</td>
<td align="left">
<xref ref-type="bibr" rid="B76">O&#x27;Brien et al. (2003)</xref>; <xref ref-type="bibr" rid="B21">Druker et al. (2006)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">12</td>
<td rowspan="2" align="left">Nilotinib</td>
<td rowspan="2" align="left">Bcr-Abl kinase inhibitor</td>
<td align="left">Phase III multicenter randomized clinical trial (ENESTnd)&#x2014;a high twofold response rate increase (44%), cytogenic response of 80%</td>
<td rowspan="2" align="left">Rashes, headache, diarrhea, retention of fluid, cardiovascular events, cytopenia, and biochemical abnormalities</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B89">Saglio et al. (2010)</xref>, <xref ref-type="bibr" rid="B48">Kantarjian et al. (2011)</xref>, <xref ref-type="bibr" rid="B41">Hochhaus et al. (2016)</xref>
</td>
</tr>
<tr>
<td align="left">24-month twofold increase of 71%, cytogenic response of 26%</td>
</tr>
<tr>
<td rowspan="3" align="left">13</td>
<td rowspan="3" align="left">Sorafenib</td>
<td rowspan="3" align="left">VEGFR</td>
<td align="left">Phase III randomized trial (TARGET)&#x2014;median PFS of 5.5&#xa0;months overall survival</td>
<td rowspan="3" align="left">Hypertension, fatigue, anemia, vomiting, and diarrhea</td>
<td rowspan="3" align="left">
<xref ref-type="bibr" rid="B25">Escudier et al. (2007)</xref>, <xref ref-type="bibr" rid="B26">Escudier et al. (2009)</xref>, <xref ref-type="bibr" rid="B7">Brose et al. (2014)</xref>
</td>
</tr>
<tr>
<td align="left">Multicenter phase III trial of sorafenib (SHARP)&#x2014;significantly increased the median OS (10.7&#xa0;months)</td>
</tr>
<tr>
<td align="left">Phase III multicenter randomized placebo-controlled trial (DECISION)&#x2014;PFS of 10.8&#xa0;months</td>
</tr>
<tr>
<td rowspan="2" align="left">14</td>
<td rowspan="2" align="left">Ponatinib</td>
<td rowspan="2" align="left">Binds to T315I mutant kinases</td>
<td align="left">Phase III trial (EPIC)&#x2014;owing to arterial embolism in an earlier report, the use of ponatinib was not established</td>
<td rowspan="2" align="left">Rash (47%), abdominal pain (46%), dry skin (42%), thrombocytopenia (46%) headache (43%), constipation (41%), diarrhea, pyrexia, myocardial infarction, anemia, neutropenia, and pancytopenia. Owing to arterial embolism, the FDA narrowed down its use in 2014</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B56">Lipton et al. (2016)</xref>, <xref ref-type="bibr" rid="B75">Nicolini et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">Philadelphia Positive Acute Lymphoblastic Leukemia and Chronic Myeloid leukemia Evaluation Trial (PACE)&#x2014;significantly longer OSR at 24&#xa0;months (84%)</td>
</tr>
<tr>
<td rowspan="4" align="left">15</td>
<td rowspan="4" align="left">Trametinib</td>
<td rowspan="4" align="left">Inhibitor of MEK</td>
<td align="left">Phase III randomized clinical trial (METRIC)&#x2014;significantly increased median PFS of 4.8&#xa0;months</td>
<td rowspan="4" align="left">Rash, diarrhea, and peripheral edema. Secondary skin neoplasm was not observed with a combination of MEK inhibitors, but was observed with BRAF kinase inhibitor</td>
<td rowspan="4" align="left">
<xref ref-type="bibr" rid="B64">Lugowska et al. (2015)</xref>, <xref ref-type="bibr" rid="B60">Long et al. (2017b)</xref>, <xref ref-type="bibr" rid="B23">Dummer et al. (2020)</xref>
</td>
</tr>
<tr>
<td align="left">COMBI-d trial&#x2014;median PFS of 9.3&#xa0;months, OS was 25.1&#xa0;months</td>
</tr>
<tr>
<td align="left">Another trial (COMBI-v)- OS and media PFS of 12&#xa0;months of 72%</td>
</tr>
<tr>
<td align="left">Phase III control randomized trial (COMBI-AD)- 3 years relapse free survival rate 58%</td>
</tr>
<tr>
<td align="left">16</td>
<td align="left">Cobimetinib</td>
<td align="left">Inhibitor of MEK</td>
<td align="left">Phase III randomized control trial comparison study&#x2014;prolonged median PFS of 9.9 months</td>
<td align="left">Pyrexia and elevated levels of liver enzymes</td>
<td align="left">
<xref ref-type="bibr" rid="B54">Larkin et al. (2014)</xref>, <xref ref-type="bibr" rid="B61">Long et al. (2017a)</xref>
</td>
</tr>
<tr>
<td rowspan="2" align="left">17</td>
<td rowspan="2" align="left">Afatinib</td>
<td rowspan="2" align="left">Irreversible ERBB</td>
<td align="left">In patients for whom chemotherapy failed significantly increased PFS by 18%, and OS improved by 19%</td>
<td align="left">Diarrhea, skin rash/acne</td>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B82">Paz-Ares et al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">Phase III randomized clinical trial (LUX-Lung 8)</td>
<td align="left">and fatigue</td>
</tr>
<tr>
<td align="left">18</td>
<td align="left">Dacomitinib</td>
<td align="left">Inhibits ERBB family members irreversibly, covalently binds to the receptor, and blocks the downstream signaling pathway</td>
<td align="left">Dacomitinib is used to treat non-small cell lung cancer that has spread (metastatic) with an epidermal growth factor receptor (EGFR) exon 19 deletion or exon 21&#xa0;L858R&#xa0;substitution mutation gene</td>
<td align="left">Dose-limiting toxicity in the skin and gastrointestinal tract because they inhibit wild-type EGFRs</td>
<td align="left">
<xref ref-type="bibr" rid="B101">Sullivan and Planchard, (2016)</xref>
</td>
</tr>
<tr>
<td align="left">19</td>
<td align="left">Neratinib</td>
<td align="left">Inhibits EGFR tyrosine kinase</td>
<td align="left">HER2-positive breast cancer</td>
<td align="left">Diarrhea, nausea, and vomiting</td>
<td align="left">
<xref ref-type="bibr" rid="B68">Martin et al. (2017)</xref>
</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Results featured in the table are from clinical trials of the inhibitors only.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="T4" position="float">
<label>TABLE 4</label>
<caption>
<p>Targets and mechanism of action of different types of FDA-approved tyrosine kinase inhibitors.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">S.N.</th>
<th align="left">Types of inhibitor</th>
<th align="center">Targets</th>
<th align="left">Mechanism of action</th>
<th align="left">Examples of FDA-approved drugs</th>
<th align="left">References</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1</td>
<td align="center">Type I</td>
<td align="left">Binds to the active site in the kinase at the active conformation in the ATP (DFG-Asp in, &#x3b1;C-helix in)</td>
<td align="left">Alters the active conformation and delays phosphorylation</td>
<td align="left">Bosutinib, crizotinib, dasatinib, erlotinib, gefitinib, lapatinib, pazopanib, ruxolitinib, sunitinib, and vemurafenib</td>
<td align="left">
<xref ref-type="bibr" rid="B87">Roskoski, (2016)</xref>
</td>
</tr>
<tr>
<td align="left">2</td>
<td align="center">Type II</td>
<td align="left">DGF out confirmation, enzyme inactive form. Occupies part of the adenine-binding pocket and forms hydrogen bonds with the hinge region, connecting the small and large lobes of the enzyme</td>
<td align="left">Interacts reversibly with targets by forming a hydrogen bond with the lipophilic hinge region. Interacts with the DFG out confirmation</td>
<td align="left">Imatinib, sorafenib, axitinib, nilotinib, ponatinib, and Sunitinib</td>
<td align="left">
<xref ref-type="bibr" rid="B87">Roskoski, (2016)</xref>
</td>
</tr>
<tr>
<td align="left">3</td>
<td align="center">Type III</td>
<td align="left">Site adjacent to the ATP-binding pocket and mediates kinase activity</td>
<td align="left">Binds to a specific enzyme, causing conformational change, which results in blocking the function of the kinase</td>
<td align="left">Trametinib and cobimetinib</td>
<td align="left">
<xref ref-type="bibr" rid="B87">Roskoski, (2016)</xref>
</td>
</tr>
<tr>
<td align="left">4</td>
<td align="center">Type IV</td>
<td align="left">Targets outside the binding site without overlapping type III inhibitors</td>
<td align="left">Do not bind to the binding site</td>
<td align="left">Everolimus, sirolimus, temsirolimus</td>
<td align="left">
<xref ref-type="bibr" rid="B37">Gumireddy et al. (2005)</xref>
</td>
</tr>
<tr>
<td align="left">5</td>
<td align="center">Type V</td>
<td align="left">Bivalent inhibitor that binds to two different regions of the protein kinase domain</td>
<td align="left">Irreversibly binds at the active site of the kinase</td>
<td align="left">Lenvatinib</td>
<td align="left">
<xref ref-type="bibr" rid="B81">Okamoto et al. (2015)</xref>
</td>
</tr>
<tr>
<td align="left">6</td>
<td align="center">Type VI</td>
<td align="left">Binds to their target kinase</td>
<td align="left">Interaction between the electrophilic groups of the inhibitors with nucleophilic cysteine</td>
<td align="left">Afatinib, dacomitinib, and neratinib</td>
<td align="left">
<xref ref-type="bibr" rid="B87">Roskoski, (2016)</xref>
</td>
</tr>
<tr>
<td align="left">7</td>
<td align="center">Type VII</td>
<td align="left">Targets the extracellular domain of tyrosine kinase inhibitor</td>
<td align="left"/>
<td align="left">SSR128129E and WRG-28</td>
<td align="left">
<xref ref-type="bibr" rid="B39">Herbert et al. (2013)</xref>, <xref ref-type="bibr" rid="B36">Grither and Longmore, (2018)</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<sec id="s3-1">
<title>Type I kinase inhibitors</title>
<p>Type I inhibitors bind to the active conformation of the kinase in the ATP (DFG-IN). This binding can alter the active conformation and delay phosphorylation. Currently, there are 10 FDA-approved tyrosine kinase inhibitors: bosutinib, crizotinib, dasatinib, erlotinib, gefitinib, lapatinib, pazopanib, ruxolitinib, sunitinib, and vemurafenib.</p>
</sec>
<sec id="s3-2">
<title>Type II kinase inhibitors</title>
<p>Type II inhibitors target the DFG-out conformation, the inactive form of the enzyme (<xref ref-type="bibr" rid="B52">Kufareva and Abagyan, 2008</xref>). They interact reversibly with the targets by forming a hydrogen bond with the lipophilic hinge region. The high specificity of type II inhibitors is due to their lipophilic interactions, which contribute to the decreased toxicity of type II inhibitors compared with type I inhibitors (<xref ref-type="bibr" rid="B6">Bhullar et al., 2018</xref>). Imatinib, sorafenib, axitinib, nilotinib, ponatinib, and sunitinib are examples of type II kinase inhibitors.</p>
</sec>
<sec id="s3-3">
<title>Type III or allosteric inhibitors</title>
<p>Type III inhibitors bind to the site adjacent to the ATP-binding pocket and mediate kinase activity (<xref ref-type="bibr" rid="B2">Amato et al., 2014</xref>). They are non-competitive inhibitors and bind to a specific kinase and exhibit high specificity. Binding to a specific enzyme causes conformational change that blocks the function of kinase. Type III inhibitors are classified into two subtypes: Type IIIA inhibitors bind to the adenine-binding site next to the ATP-binding site, and type IIIB inhibitors bind to other sites, then the site elsewhere. MEK1/2 are well-known type III inhibitors that bind to the cavity adjacent to the binding site of ATP. FDA-approved type III kinase inhibitors include trametinib and cobimetinib (<xref ref-type="bibr" rid="B29">Fasano et al., 2014</xref>).</p>
</sec>
<sec id="s3-4">
<title>Type IV inhibitors or substrate-directed inhibitors</title>
<p>This type of inhibitor binds sites that are far removed from the ATP-binding site without overlapping with type III inhibitors. Everolimus, sirolimus, and temsirolimus are all examples of FDA-approved type IV kinase inhibitors (<xref ref-type="bibr" rid="B37">Gumireddy et al., 2005</xref>).</p>
</sec>
<sec id="s3-5">
<title>Type V inhibitors</title>
<p>Type V inhibitors are bivalent and bind to the active site of the kinase irreversibly. These types of inhibitors are generally specific and potent.</p>
</sec>
<sec id="s3-6">
<title>Type VI inhibitors</title>
<p>This type of inhibitor binds to their target kinase through interaction between the electrophilic groups of the inhibitors with a nucleophilic cysteine. FDA-approved drugs that belong to this group include afatinib, dacomitinib, and neratinib, which all target EGFR (<xref ref-type="bibr" rid="B88">Roskoski, 2019</xref>). Neratinib is a recently approved kinase inhibitor that inhibits human epidermal growth factor receptor two and prevents the recurrence of early stage HER2-positive breast cancer in patients (<xref ref-type="bibr" rid="B84">Rabindran et al., 2004</xref>).</p>
</sec>
<sec id="s3-7">
<title>Type VII inhibitor</title>
<p>These types of inhibitors are defined as non-classical allosteric inhibitors that target the extracellular domain of tyrosine kinase inhibitors. They do not directly block the binding of the kinase domain/ligand-polypeptide site and are smaller than other inhibitors. Type VII inhibitors include SSR128129E (<xref ref-type="bibr" rid="B39">Herbert et al., 2013</xref>), which targets the fibroblast growth factor receptor, and WRG-28, which inhibits discoidin domain receptors (DDRs) (<xref ref-type="bibr" rid="B36">Grither and Longmore, 2018</xref>).</p>
</sec>
<sec id="s3-8">
<title>Type I inhibitors</title>
<sec id="s3-8-1">
<title>Dasatinib</title>
<p>Since the discovery of imatinib, several TKIs have been developed to inhibit Bcr-Abl kinases. These second generation TKIs were found to be more effective in treating patients whose treatment with imatinib failed or are resistant to imatinib (<xref ref-type="bibr" rid="B95">Shah et al., 2004</xref>). They are more potent at inhibiting Bcr-Abl than imatinib and nilotinib. Along with Bcr-Abl, c-Kit, PDGFRA, and B (the ephrin kinases), dasatinib also inhibits Src-kinase, which is associated with imatinib resistance. Dasatininb binds to the active conformation of the kinase Bcr-Abl. <italic>In vitro</italic> studies have shown that it can inhibit the activity of 14 out of 15 Bcr-Abl kinases, except for the mutant kinase T315I; therefore, it should be more efficient than imatinib. It may also be more efficient against imatinib-resistant CML (<xref ref-type="bibr" rid="B95">Shah et al., 2004</xref>). Dasatinib is approved by the FDA for treating Ph-positive CML, which is resistant to other Bcr-Abl inhibitors developed earlier. Various phase III clinical trials have shown a beneficial effect of dasatinib in CML patients who were resistant or intolerant to imatinib. Dasatinib and imatinib have been compared as first-line treatments (<xref ref-type="bibr" rid="B46">Kantarjian et al., 2009</xref>). Dasatinib was shown to have superior cytogenic responses to nilotinib, less efficient transformation to rapid or blast phase transformation, and higher PFS and OS rates (<xref ref-type="bibr" rid="B46">Kantarjian et al., 2009</xref>).</p>
</sec>
<sec id="s3-8-2">
<title>Bosutinib (Bosulif, SKI606)</title>
<p>Bosutinib is an orally administered third generation tyrosine kinase inhibitor. It is an Src-Abl kinase inhibitor like dasatinib but is more potent in inhibiting Bcr-Abl than imatinib. However, it does not have the potency to inhibit the activity of c-Kit or PDGFR kinase. The side effects of imatinib are caused by its inhibitory activity of c-Kit and PDGFR. A third generation TKI called bosutinib was designed as a result and has the same effectiveness as imatinib but with lesser side effects and a better safety profile than earlier Bcr-Abl inhibitors (<xref ref-type="bibr" rid="B33">Golas et al., 2003</xref>; <xref ref-type="bibr" rid="B49">Kantarjian et al., 2012</xref>). Bosutinib was efficacious at treating patients who were resistant to imatinib or intolerant to imatinib in phase I and II clinical trials (<xref ref-type="bibr" rid="B47">Kantarjian et al., 2014</xref>).</p>
<p>Bosutinib and imatinib were compared for their efficacy in treating newly diagnosed CML patients in a multinational phase III trial of the bosutinib-line in first-line chronic myelogenous leukemia treatment (B-FORE). Over 12&#xa0;months, bosutinib exhibited higher efficiency with respect to the rate of molecular response (47.2% in the bosutinib group vs 39.9% in the imatinib group, <italic>p</italic> &#x3d; 0.02). Similar results were observed in the complete cytogenic response (77.2% in the bosutinib group vs. 66.4% in the imatinib group, <italic>p</italic> &#x3d; 0.0078). Based on the encouraging results of this trial, in December 2017, the FDA approved bosutinib for the treatment of newly diagnosed CML (<xref ref-type="bibr" rid="B8">Br&#xfc;mmendorf et al., 2015</xref>; <xref ref-type="bibr" rid="B15">Cortes et al., 2018</xref>).</p>
<p>Bosutinib has been found to be superior to other tyrosine kinase inhibitors because of its distinct side effects. The commonly encountered side effect with bosutinib is diarrhea, which can be addressed by a supportive measure, and leftover liver enzymes. Additionally, it is noteworthy that cardiovascular toxicity is rare with bosutinib (<xref ref-type="bibr" rid="B8">Br&#xfc;mmendorf et al., 2015</xref>; <xref ref-type="bibr" rid="B15">Cortes et al., 2018</xref>).</p>
</sec>
<sec id="s3-8-3">
<title>Crizotinib</title>
<p>Crizotinib was originally developed to inhibit c-Met. It also inhibits ALK tyrosine kinase activity and has been shown to be effective in NCSLC patients with an ALK fusion gene (<xref ref-type="bibr" rid="B53">Kwon and Meagher, 2012</xref>). Crizotinib has a beneficial effect on ROS-1 gene rearrangement, resulting in positive NSCLC due to its sequence similarity to the AKL and c-ros oncogene (ROS1) (<xref ref-type="bibr" rid="B55">Lim et al., 2017</xref>). Crizotinib was authorized by the FDA in 2011 for NSCLC with the EML4-ALK fusion gene, and again in 2016 for NSCLC with the ROS1 gene rearrangement.</p>
<p>In an open-label phase II trial, crizotinib was tested against pemetrexed in patients with NSCLC positive for the EML4-ALK fusion gene. A significant increase was observed in the median PFS in the crizotinib group (7.7&#xa0;months) compared with pemetrexed (3&#xa0;months). The HR on progression death with crizotinib was 49% and the response rate was 65%, compared with 20% for pemetrexed (<xref ref-type="bibr" rid="B96">Shaw et al., 2013</xref>).</p>
<p>Criozotinib was compared with chemotherapy (pemetrex plus cisplatin or carboplatin) in an open-label phase III randomized clinical trial in patients with ALK-positive NSCLC (profile 1,014). Crizotinib significantly improved the median PFS (10.9&#xa0;months) compared with chemotherapy (7&#xa0;months), and it had a risk of progression or death of 0.45 (CI 0.35&#x2013;0.60, <italic>p</italic> &#x3c; 0.001) (<xref ref-type="bibr" rid="B98">Solomon et al., 2014</xref>). This kinase inhibitor can cause vision problems, nausea, vomiting, diarrhea, constipation, and elevated liver enzyme levels (<xref ref-type="bibr" rid="B96">Shaw et al., 2013</xref>).</p>
</sec>
<sec id="s3-8-4">
<title>Gefitinib</title>
<p>Gefitinib and erlotinib are competitive antagonists that bind to the ATP site of EGFRs and are first-generation EGFR-TKIs. Both drugs are used against non-small cell lung cancer, which accounts for 80% of lung cancers (<xref ref-type="bibr" rid="B70">Molina et al., 2008</xref>). In May 2003 and November 2004, the FDA approved gefitinib and erlotinib, respectively. Many studies are being conducted to examine the reuse of these drugs in cancers that involve the activation of EGFRs.</p>
<p>These TKIs are well-established treatments for NSCLC and are used as a first-line treatment for patients with EGFR-mutated NSCLC (<xref ref-type="bibr" rid="B93">Sebastian et al., 2014</xref>). EGFR mutation is common in the Asian population, especially in female non-smokers and non-smokers in general (<xref ref-type="bibr" rid="B103">Tseng et al., 2017</xref>; <xref ref-type="bibr" rid="B35">Graham et al., 2018</xref>). Anti-apoptotic properties and uncontrolled cell growth are all associated with EGFR mutation. Adenocarcinoma is the most common type of NSCLS and the most common type of EGFR-mutated NSCLS. Gefitinib was initially approved for treating NSCLS but was later withdrawn from the market due to a lack of evidence that it had a beneficial effect on survival rate in unselected patients. However, it was approved once again, as the mutation is key to the response of gefitinib. Gefitinib is significantly more efficacious against NSCLC than chemotherapy; the progression-free survival rate was 10.8 months vs. 5.4&#xa0;months, respectively, and the survival mean was 30.5&#xa0;months vs. 23.6&#xa0;months (<xref ref-type="bibr" rid="B65">Maemondo et al., 2010</xref>), respectively. In combination with chemotherapy, gefitinib was superior to gefitinib monotherapy (<xref ref-type="bibr" rid="B74">Nakamura et al., 2018</xref>).</p>
<p>Erlotinib was significantly superior to chemotherapy in advanced EGFR-positive NSCLC (PFS 13.1 vs. 4.6&#xa0;months, respectively) (<xref ref-type="bibr" rid="B118">Zhou et al., 2011a</xref>), but its overall survival was lower than chemotherapy (24.68 vs. 26.16&#xa0;months, respectively); it was superior to chemotherapy compared with chemotherapy with enhanced PS but not OS. A meta-analysis of gefitinib and erlotinib revealed that the efficacy of these two TKIs was comparable, although erlotinib caused more adverse effects.</p>
<p>Although they have not yet received therapy approval, gefitinib and erlotinib are being tested for their effectiveness against different malignancies. Although gefitinib was approved in 2005 for the treatment of pancreatic cancer in combination with chemotherapy, much of the research is still at the preclinical stage and the results are not promising. Gefitinib and erlotinib are being tested as treatments for various cancers, including nasopharyngeal cancer (<xref ref-type="bibr" rid="B12">Chua et al., 2008</xref>), gastric cancer (<xref ref-type="bibr" rid="B20">Dragovich et al., 2006</xref>), esophageal cancer (<xref ref-type="bibr" rid="B107">Wainberg et al., 2011</xref>), cervical cancer (<xref ref-type="bibr" rid="B90">Schilder et al., 2009</xref>), renal cell carcinoma (<xref ref-type="bibr" rid="B34">Gordon et al., 2009</xref>), and hepatocellular carcinoma (HCC) (<xref ref-type="bibr" rid="B58">Llovet and Hernandez-Gea, 2014</xref>). They have yet to receive approval for treatment and the results are not encouraging.</p>
<p>The most common side effects associated with gefitinib include acne rash, nausea, diarrhea, anorexia, stomatitis, and dehydration. These side effects were well tolerated by patients and the drug was withdrawn from patients who could not tolerate it. Overall, gefitinib is one of the more well-tolerated cytotoxic drugs (<xref ref-type="bibr" rid="B31">Forsythe and Faulkner, 2004</xref>).</p>
<p>Erlotinib has more severe adverse effects than gefitinib; however, like gefitinib, it is well tolerated. Dose reduction due to intolerance to side effects was more frequent with Erlotinib. According to reports, this drug caused significantly high rates of severe skin rashes, diarrhea, nausea, and vomiting, as well as stomatitis (<xref ref-type="bibr" rid="B117">Zhang et al., 2018</xref>).</p>
</sec>
<sec id="s3-8-5">
<title>Sunitinib (Sutent, SU11248)</title>
<p>Sunitinib is a first-generation VEGFR TKI and is a multi-target ATP competitive TKI. In various solid tumors, VEGFR is overexpressed and induces angiogenesis by binding to the vascular endothelium. Sunitinib is known to inhibit various tyrosine kinases, such as VEGFR2, PDGFR&#x3b2;, KIT, RET, CSF1R, and FLT3 (<xref ref-type="bibr" rid="B77">O&#x2019;Farrell et al., 2003</xref>; <xref ref-type="bibr" rid="B28">Faivre et al., 2007</xref>; <xref ref-type="bibr" rid="B83">Polyzos, 2008</xref>). In 2006, the FDA approved sunitinib for the treatment of metastatic RCC (mRCC) based on a phase III trial in which sunitinib exhibited superiority over IFN therapy. Sunitinib has also been approved for the treatment of imatinib-resistant gastrointestinal stromal tumors (GISTs). Furthermore, sunitinib was approved by the FDA in 2017 as an adjuvant therapy for adult patients at high risk of CCR after nephrectomy. In addition, in a phase III randomized trial, sunitinib was evaluated in patients who had nephrectomy and loco-regional RCC. Sunitinib patients exhibited a significant increase in disease-free survival compared with the placebo group (HR-0.76; 6.8 vs. 5.6&#xa0;years, respectively [95% CI 0.59&#x2013;0.98; <italic>p</italic> &#x3d; 0.03]) (<xref ref-type="bibr" rid="B85">Ravaud et al., 2016</xref>).</p>
<p>In another landmark phase III trial, sunitinib was tested against interferon-&#x3b1; in patients with advanced metastatic RCC. Sunitinib patients showed significantly longer PFS compared with interferon patients (11 months vs. 5&#xa0;months, respectively (HR-0.42 [95% CI 0.32&#x2013;0.54; <italic>p</italic> &#x3c; 0&#xb7;0001]) (<xref ref-type="bibr" rid="B73">Motzer et al., 2007</xref>). Common side effects associated with sunitinib include grade 3 neutropenia, leukopenia, diarrhea, fatigue, nausea, hypertension, and hand-foot mouth syndrome (<xref ref-type="bibr" rid="B19">Demetri et al., 2006</xref>).</p>
</sec>
<sec id="s3-8-6">
<title>Lapatinib</title>
<p>Lapatinib is a next-generation inhibitor that also targets HER2 TK in addition to EGFR. Lapatinib was designed and developed to inhibit the action of HER2 TK in patients with HER2-positive breast cancer (<xref ref-type="bibr" rid="B10">Cameron and Stein, 2008</xref>). FDA approval was given to lapatinib in 2007 to treat HER2 patients with metastatic and advanced breast cancer. This approval was followed by a phase III open-label study that compared the use of lapatinib and capecitabine with capecitabine alone in HER2 patients with advanced metastatic breast cancer who had previously been treated with anthracycline, taxanes, and trastuzumab. With the combination therapy, the median time to progression increased significantly to 8.4&#xa0;months from 4.4&#xa0;months, without increasing the toxic effect or systematic cardiac effect (<xref ref-type="bibr" rid="B32">Geyer et al., 2006</xref>). In 2010, lapatinib was approved for the treatment of patients with HER2-positive advanced breast cancer in combination with letrozole as a first-line agent. This approval was based on the results of a double-blind randomized phase III trial in postmenopausal women with HER2-positive advanced breast cancer. PFS was significantly prolonged in the combination therapy group compared with the letrozole and placebo groups, and the total response rate was 28% vs. 15%, respectively. Additionally, the combination therapy group had a clinical advantage of 48%, compared with 29% for letrozole alone, and experienced diarrhea 68% of the time and a rash 46% of the time. The cardiac side effect observed in trastuzumab was not observed in the letrozole group (<xref ref-type="bibr" rid="B92">Schwartzberg et al., 2010</xref>).</p>
</sec>
<sec id="s3-8-7">
<title>Pazopanib</title>
<p>Pazopanib is a multi TKI. It is an inhibitor of VEGFR, PDGFR (A and B), c-Kit, and fibroblast growth factor receptor (FGFR) (<xref ref-type="bibr" rid="B104">van Geel et al., 2012</xref>). For metastatic RCC, pazopanib was approved by the FDA in 2009, and in 2012 it was approved by the FDA for the treatment of advanced-stage soft tissue sarcoma. A global multicenter placebo-controlled randomized phase III double-blind trial was conducted with patients with locally advanced and metastatic RCC. Pazopanib significantly improved PFS compared with the control group (9.2&#xa0;months vs. 4.2&#xa0;months, respectively), with a median duration response of more than 1&#xa0;year (<xref ref-type="bibr" rid="B100">Sternberg et al., 2010</xref>). The FDA approved pazopanib as a first-line therapy for patients with metastatic RCC based on the findings of this study. By contrast, in a placebo-controlled phase III randomized trial, in which adjuvant sunitinib or sorafenib was tested in patients with high-risk non-metastatic RCC (ASSURE), pazopanib did not outperform the placebo (<xref ref-type="bibr" rid="B71">Motzer et al., 2017</xref>).</p>
<p>In a randomized controlled double-blind phase III trial that studied the preference of treatments in patients with metastatic RCC (PISCES), more patients preferred pazopanib (approximately 70%) than sunitinib (22%), whereas approximately 8% had no preference (<xref ref-type="bibr" rid="B27">Escudier et al., 2014</xref>). This proved that there was a clinical preference for pazopanib, which had the same therapeutical potentials but with a different profile of side effects. The side effects exhibited with pazopanib include diarrhea, change in hair color, and increased enzymes in the liver (<xref ref-type="bibr" rid="B100">Sternberg et al., 2010</xref>).</p>
</sec>
<sec id="s3-8-8">
<title>Ruxolitinib</title>
<p>A mutation in the JAK2 kinase domain is found in approximately 95% of patients with polycythemia vera (PV) and 50% of patients with essential thrombocytosis (ET) and myelofibrosis (MF), which causes pathogenesis at the molecular level (<xref ref-type="bibr" rid="B43">James et al., 2005</xref>; <xref ref-type="bibr" rid="B51">Kralovics et al., 2005</xref>). Ruxolitinib is a non-receptor TKI of JAK2 and Janus kinase. Several studies have tested the efficacy of ruxolitinib in all three myeloproliferative diseases. Ruxolitinib is approved for treating polycythemia vera (PV) patients who have hydroxyurea resistance or intolerance. Additionally, in 2011, ruxolitinib was approved for patients with intermediate to high-risk myelofibrosis (MF) and who were PV resistant or intolerant to hydroxyurea (2014). However, it has been noted that a significant number of patients receiving ruxolitinib lose their hair, experience a subpar response, or develop cytopenia, and this causes them to stop taking the medication after a few months. In fact, in some of the phase III trials, the discontinuation rate was 50% and 70% at 3 and 5&#xa0;years, respectively. Some of the side effects reported for this drug include anemia, thrombocytopenia, and herpes zoster infection (<xref ref-type="bibr" rid="B38">Harrison et al., 2012</xref>; <xref ref-type="bibr" rid="B106">Verstovsek et al., 2012</xref>; <xref ref-type="bibr" rid="B105">Vannucchi et al., 2015</xref>).</p>
</sec>
<sec id="s3-8-9">
<title>Vemurafenib</title>
<p>Vemurafenib was the first BRAF kinase inhibitor approved (by the FDA in 2011) for the treatment of metastatic melanoma patients with the BRAF V600E mutation. A landmark phase III randomized control trial compared Vemurafenib (RO5185426) with dacarbazine in patients with BRAF V600E mutant metastatic melanoma who had not previously received any treatment. At 6 months, the OS in the vemurafenib group increased significantly to 84% (95% CI 78&#x2013;89) compared with 64% in the dacarbazine group (95% CI 56&#x2013;73, HR-0.37; 95% CI 0.26&#x2013;0.55; <italic>p</italic> &#x3c; 0.001), and the median PFS for vemurafenib was 5.3&#xa0;months compared with 1.6&#xa0;months for dacarbazine (<xref ref-type="bibr" rid="B11">Chapman et al., 2011</xref>). In the extended study, there was a significant increase in the median OS in the vemurafenib group (95% CI 12.0&#x2013;15.2) compared with the dacarbazine group (13.6&#xa0;months vs. 9.6&#xa0;months, respectively; 95% CI 7.9&#x2013;12.8; HR-0.70; 95% CI 0.57&#x2013;0.87; <italic>p</italic> &#x3d; 0.0008). The median PFS also increased significantly in the vemurafenib group (6.9&#xa0;months; 95% CI 6.1&#x2013;7.0) compared with the dacarbazine group (1.6&#xa0;months; 95% CI 1.6&#x2013;2.1; HR-0.38; 95% CI 0.32&#x2013;0.46, <italic>p</italic> &#x3c; 0.0001 (<xref ref-type="bibr" rid="B11">Chapman et al., 2011</xref>; <xref ref-type="bibr" rid="B69">McArthur et al., 2014</xref>).</p>
</sec>
</sec>
<sec id="s3-9">
<title>Type II inhibitors</title>
<sec id="s3-9-1">
<title>Imatinib</title>
<p>Ciba-Geigy discovered imatinib while screening for platelet-derived growth factor receptor (PDGFR) kinase inhibitors. Interestingly, the compound CGP53,716 demonstrated significant activity against Abl-kinase; further modification of this compound to specifically target Bcr-Abl kinase resulted in the development and discovery of imatinib (ST571) (<xref ref-type="bibr" rid="B111">Wong and Witte, 2004</xref>). Owing to previous studies demonstrating its efficacy in patients for whom first-line therapy failed, imatinib was tested against standard therapy (interferon and cytarabine) in patients with previously untreated CML (<xref ref-type="bibr" rid="B22">Druker et al., 2001</xref>; <xref ref-type="bibr" rid="B50">Kantarjian et al., 2002</xref>). The FDA later approved imatinib as a first-line therapy for chronic CML. Additionally, it has since been approved for treating rare hematologic malignancies, as well as proto-oncogene c-Kit or tyrosine-protein kinase Kit-mutated GIST (<xref ref-type="bibr" rid="B42">Imatinib, 2008</xref>).</p>
<p>In a landmark phase III international multicenter crossover randomized study of interferon and STI571 (IRIS), imatinib was compared with a combination of interferon and cytarabine in patients with chronic CML. There was a significant increase in complete hematologic response in the imatinib group (95.3%; 95% CI 93.2&#x2013;96.9) compared with the combination therapy group (interferon and cytarabine) (27.3%; 95% CI 6.0&#x2013;61.0). Additionally, there was a major cytogenic response in the imatinib group (85.2%; 95% CI 81.9&#x2013;88.0) compared with the combination group (22.1%; 95% CI 18.7&#x2013;25.8). Although there was no significant difference in OS, it should be noted that around 89.2% (493 out of 553) patients, either discontinued or shifted to other group (<xref ref-type="bibr" rid="B76">O&#x27;Brien et al., 2003</xref>). Sixty-month follow-up showed that only 3% of the patients remained in the combination group. Furthermore, the follow-up showed a complete hematologic response of 98%, a cytogenic response of 92%, and an overall survival rate (OSR) of 89% (95% CI 86&#x2013;92) in the imatinib group (<xref ref-type="bibr" rid="B21">Druker et al., 2006</xref>). Follow-up at 120&#xa0;months showed that 48.3% of patients who were randomly assigned to the imatinib group completed the treatment regime assigned to them, whereas 1.3% completed the treatment regime in the interferon and cytarabine group. The OSR in the imatinib group was 83.3% (95% CI 80.1&#x2013;86.6) (<xref ref-type="bibr" rid="B40">Hochhaus et al., 2017</xref>). Neutropenia, thrombocytopenia, anemia, elevated liver enzymes, and other drug-related adverse events were observed (<xref ref-type="bibr" rid="B21">Druker et al., 2006</xref>). In a 10-year follow-up study, no new additional side effects were observed (<xref ref-type="bibr" rid="B40">Hochhaus et al., 2017</xref>).</p>
</sec>
<sec id="s3-9-2">
<title>Nilotinib</title>
<p>Nilotinib is a second-generation Bcr-Abl kinase inhibitor that was developed to overcome the imatinib mutant. Nilotinib is 20-fold more efficacious than imatinib. An <italic>in vitro</italic> study of the inhibitory activity of nilotinib suggested that it was able to inhibit most of the 15 Bcr-Abl mutant resistant receptors (<xref ref-type="bibr" rid="B109">Weisberg et al., 2005</xref>). It was designed to be more efficacious than imatinib and with lesser side effects than its counterpart. Nilotinib was approved by the FDA as a first-line therapy for patients with chronic CML and for patients who develop resistance or are intolerant to imatinib. In a phase III multicenter randomized clinical trial (ENESTnd), the safety and efficacy of 300&#xa0;mg BID and 400&#xa0;mg BID of nilotinib was compared with 400&#xa0;mg BID of imatinib in patients with advanced-stage CML. The 12-month study revealed that 300&#xa0;mg BID of nilotinib resulted in a response rate (44%) double that of imatinib 400&#xa0;mg BID (22%). The cytogenic response was 80% in the 300&#xa0;mg BID nilotinib group and 65% in the imatinib group; a similar response was observed in a 24-month follow-up, which showed a twofold increase of 71% in the nilotinib group and 44% in the imatinib group. Complete cytogenic response was 26% in the nilotinib group and 10% in the imatinib group. However, although there was a lower rate of death related to CML, there was no improvement in OS in the nilotinib group (<xref ref-type="bibr" rid="B89">Saglio et al., 2010</xref>; <xref ref-type="bibr" rid="B48">Kantarjian et al., 2011</xref>). The molecular response in the 300&#xa0;mg BID nilotinib group was significantly higher in the 60-month follow-up study (<xref ref-type="bibr" rid="B41">Hochhaus et al., 2016</xref>). Rashes, headaches, diarrhea, fluid retention, cardiovascular events, cytopenia, and biochemical abnormalities were all reported as side effects (<xref ref-type="bibr" rid="B41">Hochhaus et al., 2016</xref>).</p>
</sec>
<sec id="s3-9-3">
<title>Sorafenib</title>
<p>Sorafenib, like sunitinib, is a first-generation VEGFR TKI. It inhibits VEGFRs, PDGFRs, and Fms-related tyrosine kinase/Flk2/Stk-2-receptor (FLT3R). It was the first TKI to be approved for the treatment of metastatic RCC in 2005, and it is currently used as a second-line agent in the treatment of patients with metastatic RCC. Sorafenib was approved for HCC in 2007, and for metastatic thyroid cancer in 2013.</p>
<p>In a phase III randomized double-blind placebo-controlled trial of advanced RCC named TARGET (Approaches in Renal Cancer Global Evaluation Trial), sorafenib was compared with placebo. The results showed that sorafenib significantly improved median PFS (5.5&#xa0;months vs. 2.8&#xa0;months; HR-0.44, 95% CI 0.35 to 0.55; <italic>p</italic> &#x3c; 0.01) (<xref ref-type="bibr" rid="B25">Escudier et al., 2007</xref>), but the efficacy and the safety evaluation did not show any benefits with respect to OS. However, when the post crossover placebo survival data were censored, there was a significant improvement in OS in the sorafenib group (17.8 vs. 14.3 in the control; HR-0.78, <italic>p</italic> &#x3c; 0.029) (<xref ref-type="bibr" rid="B26">Escudier et al., 2009</xref>). Additionally, sorafenib was compared with a placebo in a multicenter phase III double-blind placebo trial of sorafenib in patients with advanced HCC (Hepatocellular Carcinoma Assessment Randomized Protocol [SHARP]) and was shown to significantly increase the median OS (7.9&#xa0;months&#x2013;10.7&#xa0;months) (<xref ref-type="bibr" rid="B59">Llovet et al., 2008</xref>).</p>
<p>The efficacy of sorafenib was tested in patients with radioactive iodine-refractory locally advanced or metastatic differentiated thyroid cancer in the multicenter phase III randomized placebo-controlled trial Nexavar <italic>versus</italic> Placebo in Locally Advanced/Metastatic Radio-active Iodine Refractory Differentiated Thyroid Cancer (DECISION). The results showed that sorafenib was associated with a significantly longer PFS than the placebo group (10.8&#xa0;months vs. 5.8&#xa0;months; HR-0.59, 95% CI 0.45&#x2013;0.76; <italic>p</italic> &#x3c; 0.0001) (<xref ref-type="bibr" rid="B7">Brose et al., 2014</xref>). Side effects that are commonly encountered with this inhibitor include hypertension, fatigue, anemia, vomiting, and diarrhea (<xref ref-type="bibr" rid="B25">Escudier et al., 2007</xref>; <xref ref-type="bibr" rid="B26">Escudier et al., 2009</xref>; <xref ref-type="bibr" rid="B7">Brose et al., 2014</xref>).</p>
</sec>
<sec id="s3-9-4">
<title>Ponatinib (Iclusig, IY5511)</title>
<p>Owing to the steric hindrance caused by the bulky isoleucine residue at the 315 position, all previously produced Bcr-Abl kinases find it difficult to bind to this mutant T315I kinase. To overcome this steric hindrance, a computational and structure-based approach was used (<xref ref-type="bibr" rid="B119">Zhou et al., 2011b</xref>). Ponatinib was developed specifically to bind to T315I mutant kinases. The results of <italic>in vitro</italic> studies demonstrated that it was active against all mutant T315I Bcr-Abl kinases (<xref ref-type="bibr" rid="B78">O&#x27;Hare et al., 2009</xref>).</p>
<p>A significant response to ponatinib was observed in patients who did not respond to therapy, patients with a T315I mutation, and patients who exhibited refractory therapy to TKI with an undetectable mutation in Bcr-Abl (<xref ref-type="bibr" rid="B16">Cortes et al., 2012</xref>; <xref ref-type="bibr" rid="B17">Cortes et al., 2013</xref>). In 66% of patients with a T315I mutation, ponatinib was able to induce the cytogenic response, proving its clinical efficacy. However, in generalized CML-CP patients it did not show superior efficacy to previous TKIs. Therefore, this suggests that it may be used as first-line therapy in patients with a T315I mutation or otherwise just as a second-line therapy following the use of first- and second-generation TKIs (<xref ref-type="bibr" rid="B16">Cortes et al., 2012</xref>). The phase III trial for the evaluation of ponatinib vs imatinib in chronic myeloid leukemia (EPIC), designed to study the safety evaluation and clinical efficacy, was terminated due to previous reports of arterial thrombosis (<xref ref-type="bibr" rid="B56">Lipton et al., 2016</xref>). Therefore, the use of ponatinib in patients with newly diagnosed chronic myeloid lymphoma has not yet been established.</p>
<p>Ponatinib was compared with Allo-SCT in the Philadelphia Positive Acute Lymphoblastic Leukemia and Chronic Myeloid Leukemia Evaluation Trial (PACE). Ponatinib exhibited a significantly longer OSR at 24 and 48 months (24&#xa0;months, 84% vs. 60.5%, <italic>p</italic> &#x3d; 0.004; 48&#xa0;months, 72.7% vs. 55.8%, <italic>p</italic> &#x3d; 0.013; HR &#x2212;0.37, 95% CI 0.16&#x2013;0.84; <italic>p</italic> &#x3d; 0.017) (<xref ref-type="bibr" rid="B75">Nicolini et al., 2017</xref>). To overcome the resistance of ponatinib, it is necessary to further understand the mechanism by which resistance occurs (<xref ref-type="bibr" rid="B116">Zabriskie et al., 2014</xref>; <xref ref-type="bibr" rid="B108">Wang et al., 2017</xref>; <xref ref-type="bibr" rid="B4">BCR-ABL1 compound mutations drive ponatinib, 2014</xref>). In 2014, the FDA narrowed the recommended use to ponatinib for adult patients with T315I-positive CML or ALL who had no other TKI options due to the risk of arterial embolism. Ponatinib side effects include rash (47%), abdominal pain (46%), dry skin (42%), thrombocytopenia (46%), and headache (43%). Additionally, constipation (41%), diarrhea, pyrexia, myocardial infarction, anemia, neutropenia, and pancytopenia have been reported. The arterial thrombotic event resulting from the treatment was observed by the onsite investigators in 2.2%, 0.7%, and 1.6% patients (<xref ref-type="bibr" rid="B56">Lipton et al., 2016</xref>). The most severe adverse effect observed in approximately 31% of the patients was arterial occlusive events (<xref ref-type="bibr" rid="B17">Cortes et al., 2013</xref>).</p>
</sec>
</sec>
<sec id="s3-10">
<title>Type III inhibitors</title>
<sec id="s3-10-1">
<title>Trametinib and cobimetinib</title>
<sec id="s3-10-1-1">
<title>Trametinib</title>
<p>Trametinib is an inhibitor of MEK and was developed to treat BRAF-mutated metastatic melanoma by targeting MEK. In 2013, the FDA approved trametinib for the treatment of BRAF V600E mutant metastatic melanoma, and in 2014 the FDA approved its use in combination with dabrafenib. This combination is currently being approved as a first-line treatment for BARF V600E mutant metastatic melanoma.</p>
<p>In a phase III randomized clinical trial (METRIC), the efficacy of trametinib vs. dacarbazine was tested in patients with advanced stage or metastatic BRAF V600&#xa0;E/K mutant-positive melanoma. The results of the clinical trials showed that trametinib significantly increased the median PFS (4.8&#xa0;months in the trametinib group and 1.5&#xa0;months in the dacarbazine group). In the trametinib group, the HR for progression of disease or death was 0.45 (95% CI 0.33&#x2013;0.63; <italic>p</italic> &#x3c; 0.001) (<xref ref-type="bibr" rid="B30">Flaherty et al., 2012</xref>).</p>
<p>In another study, a double-blind phase III randomized control trial, a comparison was made between dabrafenib monotherapy and trametinib and dabrafenib combination therapy in patients with BRAF mutant melanoma (COMBI-d). The results of the primary analysis at 9&#xa0;months follow-up showed a median PFS of 9.3&#xa0;months for combination therapy and 8.8&#xa0;months for dabrafenib monotherapy (HR-0.75; 95% CI 0.57&#x2013;0.99, <italic>p</italic> &#x3d; 0&#xb7;0348) (Long et al., 2014). OS was 47% in the combination group vs., 58% in the monotherapy group (HR-0.71; 95% CI 0.55&#x2013;0.92, <italic>p</italic> &#x3d; 0&#xb7;0107). The median OS was 25.1&#xa0;months for the combination group vs. 18&#xa0;months for the dabrafenib group (<xref ref-type="bibr" rid="B62">Long et al., 2014</xref>).</p>
<p>The results of a double-blind phase III randomized control trial (COMBI-v) of trametinib in combination with dabrafenib against vemurafenib alone were similar for each treatment in patients with unresectable or metastatic BRAF V600&#xa0;E/K cutaneous melanoma. The results showed a significant increase in the OS and median PFS at 12 months in the combination group (72% vs. 65% for vemurafenib alone).</p>
<p>A phase III double-blind placebo controlled randomized trial of dabrafenib with trametinib, an MEK inhibitor, was carried out for adjuvant therapy for patients with high chances of BRAF V600 mutant-positive stage III melanoma after surgical resection (COMBI-AD). The result of the 2.8-year follow-up study showed that the estimated 3-year free survival rate in the combination group was 58% compared with 39% in the placebo control group (<xref ref-type="bibr" rid="B63">Long et al., 2015</xref>; <xref ref-type="bibr" rid="B61">Long et al., 2017a</xref>).</p>
<p>Some of the common side effects associated with trametinib include rash, diarrhea, and peripheral edema. Asymptomatic and reversible reduction in cardiac ejection fraction and toxic ocular effect were not frequent. It may be interesting to note that the secondary skin neoplasm observed in patients with the BRAF KI was not observed in patients who received a combination of MEK inhibitors (<xref ref-type="bibr" rid="B30">Flaherty et al., 2012</xref>).</p>
</sec>
<sec id="s3-10-1-2">
<title>Cobimetinib</title>
<p>The FDA approved the MEK inhibitor cobimetinib in combination with vemurafenib (a BRAF inhibitor) for the treatment of patients with mutant BRAF V600E metastatic melanoma after a phase III controlled randomized trial comparison study between vemurafenib alone and vemurafenib and cobimetinib in combination. In the study, the combination group showed a prolonged median PFS of 9.9&#xa0;months compared with 6.2&#xa0;months in the vemurafenib group (HR for death or disease progression was 0.51; 95% CI 0.39&#x2013;0.68, <italic>p</italic> &#x3c; 0.001) (<xref ref-type="bibr" rid="B61">Long et al., 2017a</xref>). The common side effects observed were pyrexia and elevated levels of liver enzymes (<xref ref-type="bibr" rid="B54">Larkin et al., 2014</xref>; <xref ref-type="bibr" rid="B61">Long et al., 2017a</xref>).</p>
</sec>
</sec>
</sec>
<sec id="s3-11">
<title>Type IV inhibitors</title>
<sec id="s3-11-1">
<title>Temsirolimus</title>
<p>The first mTOR inhibitor approved was rapamycin, also known as sirolimus. It is produced by <italic>Streptomyces hygroscopicus</italic> (<xref ref-type="bibr" rid="B94">Sehgal et al., 1975</xref>) and is an antifungal agent with poor pharmacokinetic properties. However, much of the research has been focused on the development of synthetic analogs of rapamycin that have a good pharmacokinetic profile suitable for therapy (<xref ref-type="bibr" rid="B57">Liu et al., 2009</xref>). These synthetic analogs, such as everolimus, temsirolimus, and radaforolimus, differ from sirolimus at the C-40-O position, resulting in superior pharmacokinetic and pharmacodynamic profiles, with suitable therapeutic potentials. These drugs are used in the treatment of solid tumors, such as RCC, breast cancer, pancreatic neuroendocrine tumors, and tuberous sclerosis complex (<xref ref-type="bibr" rid="B3">Awada et al., 2008</xref>).</p>
<p>Targeting of mTOR kinase may benefit the management of mRCC, and temsirolimus is one of the available inhibitors. Significant results from phase III trials led, in 2007, to FDA approval of temsirolimus as a single agent in poor rim RCC patients <xref ref-type="bibr" rid="B5">Bergmann et al. (2014)</xref>. The results showed superior OS with temsirolimus compared with IFN-&#x3b1; or temsirolimus plus IFN-&#x3b1;. Additionally, temsirolimus showed benefits against clear cell carcinoma and papillary RCC.</p>
</sec>
</sec>
<sec id="s3-12">
<title>Type V inhibitors</title>
<sec id="s3-12-1">
<title>Lenvatinib</title>
<p>Lenvatinib is a TKI that inhibits VEGFR and various other FGFRs, such as FGFR1, FGFR2, FGFR3, FGFR4, PDGFRs, RET, and c-Kit (<xref ref-type="bibr" rid="B81">Okamoto et al., 2015</xref>; <xref ref-type="bibr" rid="B45">Kannaiyan and Mahadevan, 2018</xref>). It was approved for the treatment of radioactive iodine-refractory differentiated thyroid cancer by the FDA in 2015, and in 2016, the FDA approved it as a second-line therapy in combination with everolimus for treating metastatic RCC after anti-angiogenic therapy.</p>
<p>In a phase II randomized open-label multicenter trial, lenvatinib was tested as a second-line therapy for patients with metastatic RCC who had undergone anti-angiogenic therapy; lenvatinib was compared with everolimus for its efficacy, as well as the combination of everolimus and lenvatinib. The combination of lenvatinib and everolimus increased the median PFS to 14.6&#xa0;months compared with 5.5&#xa0;months for everolimus alone, whereas a significant improvement in the median PFS (7.4&#xa0;months) was observed in the lenvatinib monotherapy group compared with the everolimus group (<xref ref-type="bibr" rid="B72">Motzer et al., 2015</xref>).</p>
<p>In a phase III randomized double-blind trial, lenvetanib was investigated against the placebo in patients with progressive thyroid cancer refractive to radioactive iodine. Lenvatinib showed a median PFS of 18.3&#xa0;months compared with 3.6&#xa0;months with the placebo (HR for progression was 0.21) (<xref ref-type="bibr" rid="B91">Schlumberger et al., 2015</xref>). The side effects that were observed in patients included hypertension, fatigue, nausea, vomiting, lack of appetite, diarrhea, and hand-foot syndrome (<xref ref-type="bibr" rid="B72">Motzer et al., 2015</xref>).</p>
</sec>
</sec>
<sec id="s3-13">
<title>Type VI inhibitors</title>
<sec id="s3-13-1">
<title>Afatinib (Gilotrif, BIBW2992)</title>
<p>Afatinib is an orally available second-generation EGFR TKI. The second-generation EGFR TKIs were designed to target other members of ErbB group, including HER2. They not only target the T790M mutation of EGFR, but other EGFR-activating mutations and wild-type EFGR (<xref ref-type="bibr" rid="B110">Wind et al., 2017</xref>).</p>
<p>Afatinib is an irreversible inhibitor of the ERBB family that includes HER1 (EGFR), HER2, and HER4. Compared with chemotherapy, afatinib was effective in prolonging PFS (11.1&#xa0;months vs. 6.9&#xa0;months, respectively) (<xref ref-type="bibr" rid="B115">Yang et al., 2013</xref>). Like erlotinib, afatinib also increases PFS significantly by 18% (19% OS).</p>
<p>In NSCLC patients for whom chemotherapy failed, afatinib, like erolitinib, significantly increased PFS by 18% and OS by 19%, and it was better in terms of disease control rate (51% vs. 40%). Subsequently, the FDA approved the use of afatinib as a first-line therapy in patients with NSCLC.</p>
<p>In the phase III randomized clinical trial LUX-Lung 8, afatinib was compared with erolitinib in patients with advanced squamous cell carcinoma as a second-line therapy. Subsequently, afatinib was approved as a second-line treatment due to the findings of the study (<xref ref-type="bibr" rid="B99">Soria et al., 2015</xref>). Diarrhea, rashes or pimples on the skin, and weariness are among the side effects frequently reported with afatinib (<xref ref-type="bibr" rid="B82">Paz-Ares et al., 2017</xref>).</p>
</sec>
<sec id="s3-13-2">
<title>Dacomitinib (PF299804)</title>
<p>Dacomitinib is an oral EGFR KI that irreversibly inhibits ERBB family members; it covalently binds to the receptor and blocks the downstream signaling pathway. It is more effective than the first-generation EGFR TKIs against all wild-type EGFRs and EGFR with Del19 or L858R mutations, with broad activity against multiple ErbB receptors, such as EGFR, HER2, and HER4. On 27 September 2018, the FDA approved dacomitinib (Vizimpro, Pfizer) as a first-line therapy for patients with metastatic NSCLC or EGFR with Del19 or exon 21 L858R mutations, as detected by an FDA-approved test (<xref ref-type="bibr" rid="B86">Reckamp et al., 2014</xref>; <xref ref-type="bibr" rid="B113">Wu et al., 2017a</xref>). The dose-limiting toxicity exhibited by second-generation EGFR TKIs is mainly exhibited in the skin and gastrointestinal tract because they also inhibit wild-type EGFRs (<xref ref-type="bibr" rid="B101">Sullivan and Planchard, 2016</xref>).</p>
</sec>
<sec id="s3-13-3">
<title>Neratinib</title>
<p>Neratinib is a TKI that targets all EGFRs and also inhibits EGFR tyrosine kinase. It is approved by the FDA as an adjuvant therapy for patients with early-stage breast cancer who test positive for HER2 after trastuzumab adjuvant therapy. This approval was based on the findings of a phase III randomized clinical trial that looked at the efficacy and safety of neratinib after adjuvant therapy with neoadjuvant and trastuzumab in patients with HER2-positive early-stage (I-III) breast cancer. Some of the side effects observed included diarrhea, nausea, and vomiting (<xref ref-type="bibr" rid="B68">Martin et al., 2017</xref>).</p>
<p>These small molecules interact with different receptors in various proteins. The interaction of these TKIs has been well studied using various molecular modeling software. <xref ref-type="fig" rid="F1">Figure 1</xref> shows one of the options in which molecular modeling and docking studies are carried out using Schrodinger software (Maestro 12.1, United States). In this review, these molecules have been redocked.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Docking poses of different proteins with drugs.<bold>(A)</bold> Imatinib. <bold>(B)</bold> Ponatib. <bold>(C)</bold> Nilotinib docked to human Abl kinase (2HYY). <bold>(D)</bold> Ruxolitinib dock to c-Jun N-terminal kinase (2P33). <bold>(E)</bold> Dasatinib docked to activated ABL kinase domain (2GQG). <bold>(F)</bold> Afatinib with EGFR kinase (4G5J). <bold>(G)</bold> Neratilib docked to HER2(3RCD). <bold>(H)</bold> Temsirolimus with human serum albumin (1AO6).</p>
</caption>
<graphic xlink:href="fphar-13-1064472-g001.tif"/>
</fig>
</sec>
</sec>
</sec>
<sec sec-type="conclusion" id="s4">
<title>Conclusion</title>
<p>The success of imatinib has led to the development of various KIs; currently (as of 29 October 2021) there are approximately 68 FDA-approved KIs in clinical use (<ext-link ext-link-type="uri" xlink:href="http://www.brimr.org/PKI/PKIs.htm">http://www.brimr.org/PKI/PKIs.htm</ext-link>). All of these KIs are delivered orally, with a few exceptions, such as temsirolimus and trilaciclib, and netarsudil, which is available as an ophthalmic solution for eye drops. The development of KIs in cancer has led to a new approach in this regard. It may be noted that they are generally less toxic and have more chemotherapeutic potential than conventional chemotherapy. However, like conventional therapy, KIs have some limitations, such as the development of resistance, and some adverse effects.</p>
<p>Resistance developed during treatment can be addressed through the clonal expansion of cells that do not respond to specific kinase or secondary kinase mutations that render the kinase inhibitor ineffective. Understanding the resistance mechanism has resulted in the design and development of new KIs or combination therapies. For instance, development of the new Bcr-Abl KI ponatinib targeted the T315I mutant gene that was resistance to first- and second-generation Bcr-Abl inhibitors. Understanding the mechanism of resistance of EGFR T790M to the TKI of EGFR has led to the development of osimertinib, which targets the mutant gene of EGFR T790M. Combination therapy is another option for overcoming resistance; for example, understanding the mechanism of the MEK inhibitor that causes reactivation of the MAPK pathway, which in turn activates MEK towards the resistance of the BRAF inhibitors (in melanoma), prompted the use of combination therapy consisting of BRAF and MEK inhibitors, which resulted in better clinical outcomes than single therapy.</p>
<p>One of the main concerns associated with the use of KIs is adverse effects. As mentioned above, owing to the risk of arterial embolism, the FDA had to narrow down the recommended use of ponatinib. This issue can be addressed by choosing more specific KIs. Additionally, understanding the mechanisms of side effects may help to lessen their effect.</p>
<p>The remaining option for overcoming the above concerns is to continuously and thoroughly screen the patient&#x2019;s condition, plasma concentration, and personalized treatment approach. Even if the stage and the cancer are the same, there may be differences depending on the patient&#x2019;s status and tumor, hence a personalized treatment regime may be one of the best approaches.</p>
<p>Owing to the success of KIs, there is a rise in the design and development of new small molecule inhibitors. The use of new technologies, such as mass spectrometry-based proteomics, may help facilitate the development of more specific target-oriented inhibitors.</p>
</sec>
</body>
<back>
<sec id="s5">
<title>Author contributions</title>
<p>All authors listed have made a substantial, direct, and intellectual contribution to the work and approved it for publication.</p>
</sec>
<sec id="s6">
<title>Funding</title>
<p>APC (in part) is supported by the Deanship of University Scientific Research.</p>
</sec>
<ack>
<p>The authors would like to express their gratitude to the Deans of the Faculty of Pharmacy and Allied Medical Sciences and the Dean of Scientific Research at Al-Ahliyya Amman University in Amman, Jordan, for providing the required facilities.</p>
</ack>
<sec sec-type="COI-statement" id="s7">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s8">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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