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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Pharmacol.</journal-id>
<journal-title>Frontiers in Pharmacology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Pharmacol.</abbrev-journal-title>
<issn pub-type="epub">1663-9812</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">770524</article-id>
<article-id pub-id-type="doi">10.3389/fphar.2021.770524</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Pharmacology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Study on the Molecular Basis of Huanglian Jiedu Decoction Against Atopic Dermatitis Integrating Chemistry, Biochemistry, and Metabolomics Strategies</article-title>
<alt-title alt-title-type="left-running-head">Chen et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">Molecular Basis of HLJDD Against AD</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Jing</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1044120/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Saizhen</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Jinguang</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shen</surname>
<given-names>Bixin</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Jiang</surname>
<given-names>Zhengli</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Xu</surname>
<given-names>Yubin</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1071087/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<label>
<sup>1</sup>
</label>Department of Pharmacy, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, <addr-line>Lin Hai</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<label>
<sup>2</sup>
</label>Department of Pharmacy, Taizhou Central Hospital (Taizhou University Hospital), <addr-line>Taizhou</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<label>
<sup>3</sup>
</label>Department of Dermatology, Taizhou Central Hospital (Taizhou University Hospital), <addr-line>Taizhou</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<label>
<sup>4</sup>
</label>Department of Pharmaceutics, School of Pharmaceutical Sciences, Wenzhou Medical University, <addr-line>Wenzhou</addr-line>, <country>China</country>
</aff>
<author-notes>
<corresp id="c001">&#x2a;Correspondence: Yubin Xu, <email>xuyubin1988@126.com</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Ethnopharmacology, a section of the journal Frontiers in Pharmacology</p>
</fn>
<fn fn-type="equal" id="fn1">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this&#x20;work</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/361848/overview">D&#xe2;maris Silveira</ext-link>, University of Brasilia, Brazil</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/25240/overview">Helen Skaltsa</ext-link>, National and Kapodistrian University of Athens, Greece</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1170535/overview">Leonardo Borges</ext-link>, State University of Goi&#xe1;s, Brazil</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>14</day>
<month>12</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>12</volume>
<elocation-id>770524</elocation-id>
<history>
<date date-type="received">
<day>07</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>24</day>
<month>11</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Chen, Chen, Chen, Shen, Jiang and Xu.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Chen, Chen, Chen, Shen, Jiang and Xu</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Atopic dermatitis (AD) is a common chronic relapsing skin inflammation, which severely affect the quality of life of patients. Inhibiting itching and enhancing immunity to mitigate scratching are key elements in the fight against AD. Huanglian Jiedu decoction (HLJDD) has multiple pharmacological effects in the treatment of AD. However, the effective ingredients and underlying molecular mechanisms have not yet been fully explored. Thus, this study integrates chemistry, biochemistry, and metabolomics strategies to evaluate the active substance basis of HLJDD against AD. First, HLJDD was split to five fractions (CPF, 40AEF, 90AEF, PEF and WEF) and 72 chemical components were identified. NSD (Non-similarity degree) among the different fractions showed significant chemical differences (&#x3e;81%). Interleukin IL-13, IL-17A, IL-3, IL-31, IL-33, IL4, IL-5, TSLP, IgE, and histamine in the serum, and IL-4R&#x3b1;, JAK1, and HRH4 levels in skin, participating in inhibiting itching and regulating immunity signaling, were found to be restored to varying degrees in AD treating with HLJDD and its fractions, especially 40AEF and CPF. Untargeted metabolomics analysis demonstrated that forty metabolites were differential metabolites in plasma between the HLJDD-treated group and the AD group, involving in histidine metabolism, arginine biosynthesis, pyrimidine metabolism, and so on. Further, targeted metabolomics analysis revealed that eleven differential metabolites, associating with physiological and biochemical indices, were significant improved in the HLJDD and its fractions groups. In conclusion, HLJDD exhibited anti-AD effects by inhibiting itching and enhancing immunity, which in turn regulating the levels of relative metabolites, and CPF and 40AEF were considered the most important components of HLJDD.</p>
</abstract>
<kwd-group>
<kwd>huanglian jiedu decoction</kwd>
<kwd>atopic dermatitis (AD)</kwd>
<kwd>metabolomics</kwd>
<kwd>molecular basis</kwd>
<kwd>mechanism</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Atopic dermatitis (AD), also known as atopic eczema, is a common chronic relapsing skin inflammation (<xref ref-type="bibr" rid="B45">Serrano et&#x20;al., 2019</xref>). AD has a high incidence in developed countries, with a prevalence of up to 10&#x2013;20% in Korea, Japan, Europe, and United&#x20;States (<xref ref-type="bibr" rid="B23">Kim et&#x20;al., 2016</xref>). As a result of rapid urbanization, the prevalence of AD has increased worldwide (<xref ref-type="bibr" rid="B12">Daya and Barnes, 2019</xref>). In China, a higher regional prevalence has been observed in coastal cities. Although AD is not uniformly lethal, it has a long disease duration and persistent symptoms, such as dryness, itching, and roughness, which severely affect the quality of life of patients, exerting a significant economic burden (<xref ref-type="bibr" rid="B13">Eckert et&#x20;al., 2019</xref>; <xref ref-type="bibr" rid="B35">Olsson et al., 2020</xref>), especially in individuals with skin infections (<xref ref-type="bibr" rid="B43">Sandhu et&#x20;al., 2019</xref>).</p>
<p>AD pathogenesis is a complex disorder that is considered to arise through a combination of genetic, immunological, environmental, skin barrier, and skin microbiota factors. Among these, skin barrier damage and immunologic dysfunction are considered critical factors (<xref ref-type="bibr" rid="B4">Bonamonte et&#x20;al., 2019</xref>). Recent studies have shown that eosinophils and mast cells are the most important effector cells in AD, releasing inflammatory mediators, such as histamine, leukotrienes, and cytokines (IL-3, IL-4, IL-5, and IL-13), which ultimately leads to itching and skin lesions, which are characteristic of AD (<xref ref-type="bibr" rid="B40">Raap et&#x20;al., 2006</xref>; <xref ref-type="bibr" rid="B27">Lam, 2010</xref>). A large number of CD4<sup>&#x2b;</sup> T-cell infiltrates were observed in AD. CD4<sup>&#x2b;</sup> T&#x20;cells exhibit a variety of biological functions, including secretion of cytokines for immune regulation and effector function, which are divided into Th1 and Th2 subsets (<xref ref-type="bibr" rid="B49">Sur et&#x20;al., 2016</xref>). Th2 cells secrete cytokines such as IL-4, IL-5, and IL-13, which are important for AD development, especially in the acute phase of AD. IL-4, IL-5, and IL-13 induce B&#x20;cell activation to produce IgE, and there is a positive correlation between IgE and IL-4 levels. Mast cells were recruited by chemokines and activated by IgE or non-IgE factors. Finally, mast cells produce a range of inflammatory factors, which interact with nerve cells, T&#x20;cells, eosinophils, and keratinocytes, and participate in the process of skin itch and inflammatory reactions in AD. In addition, IL-31 was not only strongly associated with pruritus in AD but also exhibited synergy with the H4 receptor, thus aggravating pruritus and skin lesions (<xref ref-type="bibr" rid="B36">Otsuka et&#x20;al., 2011</xref>). Previous studies have indicated that IL-4R&#x3b1; and JAK1 are key indices of inflammatory chronic itching and non-inflammatory chronic itching, respectively, with IL-4 promoting histamine release and worsening pruritus (<xref ref-type="bibr" rid="B34">Oetjen et&#x20;al., 2017</xref>). Ultimately, skin barrier dysfunction and imbalanced immune function jointly contribute to the development of AD. Therefore, inhibiting itching and enhancing immunity to mitigate scratching are key elements in the fight against AD, which would improve the patient&#x2019;s quality of life. A vast variety of treatments, including emollient, anti-inflammatory, and antimicrobial therapies, have been prescribed for AD. However, even though these treatments seem optimal in many patients, their long-term use carries the risk of severe systemic and cutaneous adverse effects. For these reasons, patients often seek alternative therapies (<xref ref-type="bibr" rid="B3">Blume-Peytavi et&#x20;al., 2019</xref>). Therefore, a cure for AD requires a new treatment strategy to improve the efficacy and reduce the toxicity of short- and long-term therapeutic regimens.</p>
<p>Huanglian Jiedu decoction (HLJDD), a traditional Chinese medicine, is frequently prescribed due to its effectiveness against&#x20;a variety of serious illnesses, including those of the skin (<xref ref-type="bibr" rid="B9">Chen et&#x20;al., 2016</xref>). The formula is composed of four Chinese medicines: <italic>Coptis chinensis</italic> Franch.(Huanglian), <italic>Scutellaria baicalensis</italic> Georgi (huangqin), <italic>Phellodendron amurense</italic> Rupr.(huangbai), and <italic>Gardenia jasminoides</italic> J.&#x20;Ellis (zhizi) at a ratio of 3:2:3:3 (<xref ref-type="bibr" rid="B6">Chen, et&#x20;al., 2017</xref>). Modern pharmacological studies have confirmed that HLJDD has antipyretic, anti-inflammatory, antibacterial, antiulcer, and antitumor properties and promotes phagocytic function. With these properties, HLJDD has a curative effect in the treatment of AD (<xref ref-type="bibr" rid="B39">Qi et&#x20;al., 2019</xref>). Clinical and experimental studies have confirmed that HLJDD is an effective drug for treating AD. However, the effective ingredients and underlying molecular mechanisms have not yet been fully explored (<xref ref-type="bibr" rid="B24">Kobayashi et&#x20;al., 2004</xref>).</p>
<p>Traditional Chinese medicine (TCM) has been used to control and cure diseases for thousands of years. Formulas are a fundamental and unique part of TCM. TCM formulae are designed according to dialectical thinking, holistically and synergistically to maximize their therapeutic effectiveness. TCM formulae contains hundreds of chemical components, wherein each component has a different target, exhibiting extraordinary pharmacological activities (<xref ref-type="bibr" rid="B68">Zhang et&#x20;al., 2017</xref>). In recent decades, decoction or ethanol extracts of Chinese drugs or TCM formulas have been split into different fractions to evaluate their main pharmacodynamic components (<xref ref-type="bibr" rid="B38">Pico-Hern&#xe1;ndez et&#x20;al., 2020</xref>). However, many similar chemical components exist among the splitting fractions, resulting in a dispersion or loss of pharmacological activity. Hence, there is a need to establish a method with which to evaluate the non-similarity degrees of the splitting fractions.</p>
<p>At present, splitting fractions are characterized by HPLC to evaluate the non-similarity degrees among different fractions (<xref ref-type="bibr" rid="B66">Yuansheng et&#x20;al., 2006</xref>). In our previous study, the chemical compositions of <italic>Atractylodes macrocephala</italic> Koidz. were split into five splitting fractions, and non-similarity degrees were evaluated using a variety of analytical methods (<xref ref-type="bibr" rid="B29">Li et&#x20;al., 2014a</xref>). However, the characterization of these chemical constituents is often identified by HPLC techniques combining pure standards (<xref ref-type="bibr" rid="B32">Maimaiti et&#x20;al., 2020</xref>). There are relatively few chemical constituents for characterization by HPLC, which could result in errors or an incomplete evaluation of non-similarity degrees. So far, there have been few reports on the characterization of chemical constituents of fractions of UPLC-Q-TOF/MS/MS, and almost no research on the evaluation of non-similarity degrees among different fractions. In recent years, LC-MS and UPLC-Q-TOF/MS/MS have been used to analyze and determine the chemical constituents of Chinese drugs, particularly UPLC-Q-TOF/MS/MS technology (<xref ref-type="bibr" rid="B5">Cao et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B31">Ma et&#x20;al., 2016</xref>). Currently, UPLC-Q-TOF/MS/MS is widely used for the analysis of the multiple chemical constituents of Chinese drugs, and is highly accurate, highly efficient, and has a wide molecular mass range (<xref ref-type="bibr" rid="B52">Wang et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B62">Yang et&#x20;al., 2015</xref>).</p>
<p>In the present study, the chemical constituents of HLJDD were split using various separation methods, analyzed, and identified by UPLC-Q-TOF/MS/MS technology combined with standard substances and literature. Meanwhile, a DNFB-induced AD model was established and used to explore the effects of HLJDD and its fractions. In addition, untargeted metabolomics analyses were performed to screen potential biomarkers of AD, and targeted metabolomic analyses were performed to elucidate and verify the therapeutic effects of HLJDD and its fractions.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and Methods</title>
<sec id="s2-1">
<title>Chemicals and Reagents</title>
<p>
<italic>Coptis chinensis Franch</italic>.(Huanglian), <italic>Scutellaria baicalensis</italic> Georgi (huangqin), <italic>Phellodendron amurense</italic> Rupr.(huangbai), and <italic>Gardenia jasminoides</italic> J.&#x20;Ellis (zhizi) were purchased from Hangzhou Mintai (Bozhou) Chinese Herbal Medicine Co. Ltd. (Zhejiang, China) and were certified by the standards elaborated in Chinese Pharmacopeia (2020 edition). Portions of the above four herbs were deposited in the Department of Pharmacy of Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang for future reference under reference number Xu1-4. 2,4-dinitrofluorobenzene (DNFB) was purchased from Shanghai McLean Biochemical Technology Co., Ltd. (Shanghai, China).</p>
<p>Methanol, acetonitrile, and formic acid (LC-MS grade) were purchased from CNW Technologies (Germany). Ethanol, petroleum ether, and ethyl acetate (analysis grade) were obtained from Tianjin Damao Chemical Reagent Co., Ltd. (China). The standard substances of baicalin, chrysin, ferulic acid, geniposide, obacunone, wogonin, wogonoside, auraptene, protopine, isochlorogenic acid A, chelerythrine, rutecarpine, palmatine, and berberine were purchased from the resource platform of the National Standard Material (China).</p>
</sec>
<sec id="s2-2">
<title>Preparation of HLJDD and Splitting of the HLJDD Fractions</title>
<p>HLJDD was composed of <italic>Coptis chinensis</italic> Franch. 900&#xa0;g, <italic>Scutellaria baicalensis</italic> Georgi 600&#xa0;g, <italic>Phellodendron amurense</italic> Rupr. 600&#xa0;g, and <italic>Gardenia jasminoides</italic> J.&#x20;Ellis 900&#xa0;g. The above four Chinese medicines were pulverized and decocted twice by refluxing with water (1:12&#xa0;w/v) for 2&#xa0;h, then filtered, and the filtrate was combined and concentrated in vacuum to 0.3&#xa0;g crude drug per 1&#xa0;ml and then stored in 4&#xb0;C for the water decoction of HLJDD. According to the polarity differences of the chemical constituents of HLJDD, the water decoction of HLJDD was split into crude polysaccharide fraction (CPF), petroleum ether fraction (PEF), water eluted fraction (WEF), 40% ethanol eluted fraction (40AEF), and 90% ethanol eluted fraction (90AEF). The specific processes are described in the <xref ref-type="sec" rid="s12">Supplementary Material S1</xref>. Meanwhile, the HPLC fingerprints of four small molecular components (PEF, WEF, 40AEF, and 90AEF) were established using a similarity evaluation system for chromatographic fingerprints of TCM (version 2012A). The chromatographic conditions are described in the <xref ref-type="sec" rid="s12">Supplementary Material&#x20;S1</xref>.</p>
</sec>
<sec id="s2-3">
<title>UPLC-Q-TOF-MS/MS Analysis of HLJDD and its Fractions</title>
<p>The chemical constituents of HLJDD and its fractions were analyzed and identified by UPLC-Q-TOF/MS/MS technology combined with standard substances and the literature. Details&#x20;of the chromatography, mass spectrometry conditions, and data&#x20;processing are described in <xref ref-type="sec" rid="s12">Supplementary Material&#x20;S2</xref>.</p>
</sec>
<sec id="s2-4">
<title>Non-Similarity Degree Evaluation of Chemical Fractions</title>
<p>Given that the overlapping property was small between CPF and other fractions, we only evaluated the NSD of four small molecular components (PEF, WEF, 40AEF, and 90AEF). NSD was evaluated and measured by qualitative analysis and quantitative analysis using HPLC data and UPLC-Q-TOF-MS/MS&#x20;data.</p>
<p>Principal component analysis (PCA) and hierarchical clustering analysis (HCA) were used to evaluate the NSD of the four fractions. Multivariate analysis was performed using a&#x20;combination of PCA and the SIMCA-P software (version 14.0). HCA was performed using the OmicShare tools in RStudio.</p>
<p>Based on a previous study (<xref ref-type="bibr" rid="B30">Li et&#x20;al., 2014b</xref>), the standard degree was defined as the overlapping property or similarity degree, and NSD was defined as the un-overlapping property or non-similarity degree among the four fractions. The sum of the similarity degree and NSD was equal to 1. Furthermore, NSD was introduced to measure the un-overlapping property of four fractions by peak areas of crude drug, angle cosine analysis, and correlation coefficient analysis. NSD among different fractions was calculated using the cross-analysis method of peak areas of crude drug, angle cosine analysis&#x20;method (<xref ref-type="bibr" rid="B54">Wang et&#x20;al., 2002</xref>), and correlation coefficient analysis&#x20;method (<xref ref-type="bibr" rid="B17">Guo et&#x20;al., 2014</xref>). The specific algorithm for the three methods is described in <xref ref-type="sec" rid="s12">Supplementary Material&#x20;S3</xref>.</p>
</sec>
<sec id="s2-5">
<title>AD Model Establishment and Treatment</title>
<p>Male C57BL/6 mice (4&#x2013;6&#xa0;weeks), weighing 20&#x20;&#xb1; 2&#xa0;g, were purchased from Shrek Jinda Laboratory Animals Co., Ltd. (Hunan, China, Laboratory Animal License &#x23;SCXK 2016-0010). The animals were kept under SPF laboratory conditions and provided with a standard laboratory diet and filtered tap water. All animal experimental procedures were approved by the Bioethics Committee of Shanghai Tenth People&#x2019;s Hospital (ID no. SHDSYY-2020-9001). All experimental animals were acclimated for 1&#xa0;week before the experiment.</p>
<p>In the present study, reference-dose HLJDD in mice was selected as the clinically equivalent dose of HLJDD in humans (according to the body surface area exchange algorithm of human and mice: HLJDD clinical dose: 30&#xa0;g/day, adult weight 70&#xa0;kg, the dose of mice was: 30&#xa0;g/70&#xa0;kg &#xd7; 9.1 &#x2248; 3.9&#xa0;g/kg). With this as a reference dose, we have previously shown the effects of different dosages of HLJDD (3.2&#xa0;g/kg, 6.4&#xa0;g/kg, and 12.8&#xa0;g/kg) on the AD model. After the dose-effect experiment, 12.8&#xa0;g/kg was found to be the effective dose (<xref ref-type="sec" rid="s12">Supplementary Material S4</xref>). Therefore, the 12.8&#xa0;g/kg water decoction of HLJDD and the five fractions with the corresponding extracts (CPF: 921.6&#xa0;mg/kg, 40AEF: 458.24&#xa0;mg/kg, 90AEF: 460.8&#xa0;mg/kg, WEF: 1.0086&#xa0;g/kg, PEF: 1.38&#xa0;mg/kg) were used to evaluate the mechanism and substance basis of Huanglian Jiedu decoction against AD. Then, C57BL/6 mice were randomly divided into 8 groups (8 mice per group): normal control group, AD model group, HLJDD group (12.8&#xa0;g/kg), CPF group, 40AEF group, 90AEF group, WEF group, and PEF group. To prepare the 2,4-dinitro-1-fluorobenzene (DNFB) solution, DNFB was dissolved in acetone/olive oil (4:1) and applied to mouse skin. The procedure was performed as previously reported, with some modifications (<xref ref-type="bibr" rid="B8">Chen et&#x20;al, 2020a</xref>). Briefly, an electric shaver was used to remove the hair from the abdominal and back skin of mice on the first day (the area of hair removal was about 2&#x20;&#xd7; 2&#xa0;cm<sup>2</sup>). Then, 200&#xa0;&#x3bc;l of 1% DNFB was used to sensitize the abdominal skin on days 1, 4, and 7, once a day, for a total of three times. The mice were challenged with 200&#xa0;&#x3bc;l of 0.5% DNFB on the back skin on days&#x20;14, 17, 19, 22, 24, 27, and 29 in the model and HLJDD groups, once a day. Mice from the control group were smeared with an equal volume of DNFB matrix solution at the same time points. After being challenged, the mice from the HLJDD groups and its fractions groups were intragastrically administrated with HLJDD (12.8&#xa0;g/kg) and its fractions (CPF: 921.6&#xa0;mg/kg, 40AEF: 458.24&#xa0;mg/kg, 90AEF: 460.8&#xa0;mg/kg, WEF: 1.0086&#xa0;g/kg, PEF: 1.38&#xa0;mg/kg) once a day for 16&#xa0;days, respectively, while the mice from normal control group and AD model group were administrated with an equal volume of saline. After the last administration, each group of mice was anesthetized. Blood samples were collected from the ophthalmic venous plexus, from which serum was separated and stored at &#x2012;80&#xb0;C for future research. Finally, the mice were sacrificed, and the dorsal skin tissue samples were harvested and stored at &#x2012;80&#xb0;C for further analysis.</p>
</sec>
<sec id="s2-6">
<title>Evaluation of Back Skin Lesions</title>
<p>The AD-like symptoms of skin induced by DNFB were scored upon completion of drug treatment. The back lesions were&#x20;evaluated based on clinical presentation criteria (<xref ref-type="bibr" rid="B11">Choi et&#x20;al., 2018</xref>): erythema, edema/papules, epidermal stripping/scratches, and scales (dry), which were categorized into four&#x20;grades: no lesion, light, medium, and severe (recorded as 0, 1, 2, and 3, respectively). Ear thickness was measured using a Vernier caliper, and the difference between the weight of the left and right ears was calculated as the degree of swelling. The swelling rate of the ear was calculated as follows (<xref ref-type="bibr" rid="B28">Li et&#x20;al., 2020</xref>): [(the degree of swelling of ear in AD model group &#x2012; the degree of swelling of ear after treatment)/the degree of ear swelling in the AD model group] &#xd7;&#x20;100%.</p>
</sec>
<sec id="s2-7">
<title>H&#x26;E Staining</title>
<p>The dorsal skin was embedded in paraffin and sliced into 5-&#x3bc;m sections. The pathological sections were stained with hematoxylin and eosin (H&#x26;E), and the sections were examined under an optical microscope.</p>
</sec>
<sec id="s2-8">
<title>Index Measurement</title>
<p>The serum levels of IgE and histamine were determined using the appropriate ELISA kits according to the manufacturer&#x2019;s instructions. The serum levels of IL-13, IL-17A, IL-3, IL-31, IL-33, IL4, IL-5, and TSLP in the serum were measured using Luminex technology (R&#x26;D Systems, Abingdon, United&#x20;Kingdom) on a Luminex 200 instrument.</p>
</sec>
<sec id="s2-9">
<title>Real-Time PCR Analysis</title>
<p>RT-PCR was used to determine the expression levels of JAK1, HRH4, and IL-4R&#x3b1; mRNAs. Total RNA was isolated and extracted from the dorsal skin tissues using TRIzol<sup>&#xae;</sup> reagent (Invitrogen, Thermo Fisher Scientific, Inc.). Reverse transcription was performed to synthesize cDNA using the HiScript II Q RT SuperMix for qPCR (&#x2b;gDNA wiper) (R223-01; Vazyme, Inc.). RT-PCR analysis was performed using 2&#xd7; SYBR Green PCR Master Mix (A4004M; Lifeint) on a CFX Connect&#x2122; PCR instrument (Bio-Rad Laboratories, Shanghai, China) according to the manufacturer&#x2019;s protocol. The primer sequences were as follows: JAK1 specific primer (forward: 5&#x2032;-GGC&#x200b;GTT&#x200b;CTG&#x200b;TGC&#x200b;TAA&#x200b;AAT&#x200b;GA-3&#x2032;, reverse: 5&#x2032;-AGG&#x200b;GCG&#x200b;AAG&#x200b;AGG&#x200b;TTG&#x200b;TGA&#x200b;C-3&#x2032;), IL-4R&#x3b1; specific primer (forward: 5&#x2032;-GGA&#x200b;GGA&#x200b;GGA&#x200b;AGA&#x200b;AGA&#x200b;TGA&#x200b;GAT&#x200b;AG-3&#x2032;, reverse: 5&#x2032;-CCA&#x200b;ACA&#x200b;AGT&#x200b;CGG&#x200b;AAA&#x200b;ACA&#x200b;GG-3&#x2032;), HRH4 specific primer (forward: 5&#x2032;-TGA&#x200b;CTT&#x200b;CCT&#x200b;CGT&#x200b;GGG&#x200b;TTT&#x200b;G-3&#x2032;, reverse: 5&#x2032;-ATT&#x200b;GTA&#x200b;GAC&#x200b;AGA&#x200b;TGC&#x200b;GGT&#x200b;GC-3&#x2032;), and &#x3b2;-actin specific primer (forward: 5&#x2032;-AGG&#x200b;GAA&#x200b;ATC&#x200b;GTG&#x200b;CGT&#x200b;GAC-3&#x2032;, reverse: 5&#x2032;-CAT&#x200b;ACC&#x200b;CAA&#x200b;GAA&#x200b;GGA&#x200b;AGG&#x200b;CT-3&#x2032;). The expression levels of the target mRNAs were calculated based on normalization to &#x3b2;-actin expression.</p>
</sec>
<sec id="s2-10">
<title>Western Blot Analysis</title>
<p>Western blotting was performed to evaluate the protein expression of IL-4R&#x3b1;, JAK1, p-JAK1, and HRH4. Briefly, total protein from dorsal skin tissue was extracted and quantified using the BCA protein quantitative assay. Protein sample buffer was added and heated in a boiling water bath. The denatured protein was separated on a 12% polyacrylamide gel and transferred to a polyvinylidene fluoride membrane. The blot was blocked in 5% skimmed milk at room temperature for 2&#xa0;h, followed by co-incubation with the appropriate proportions of primary and secondary antibodies. The number of target bands was detected using ECL chemiluminescence. The antibodies used for western blotting were anti-IL-4R&#x3b1; (&#x23;DF8567; Affinity), anti-JAK1 (&#x23;66466-1-ap; Proteintech), anti-p-JAK1 (&#x23;AF 2012; Affinity), and anti-HRH4 (&#x23;OM209489; Omnimabs).</p>
</sec>
<sec id="s2-11">
<title>Untargeted Metabolomics</title>
<p>To explore the changes in the metabolomic characteristics of AD, the concentrations of different serum metabolites in AD and HLJDD-treated mice were confirmed by a UPLC-Q-TOF/MS/MS-based metabolomic approach. Details of chromatography, mass spectrometry conditions, and data processing are provided in <xref ref-type="sec" rid="s12">Supplementary Material&#x20;S5</xref>.</p>
</sec>
<sec id="s2-12">
<title>Targeted Metabolomics</title>
<p>To screen for discriminatory metabolites, Pearson&#x2019;s correlation analysis was performed to analyze the correlation between macroscopic indexes and metabolites. Metabolites significantly associated with macroscopic indices were used to further evaluate the mechanism of HLJDD fractions. Meanwhile, considering the accuracy of metabolites and the diversity detected in each sample, we performed a targeted quantification of 14 endogenous metabolites (targeted metabolomics). The standard substances (prostaglandin D1, phosphocreatinine, n-methyl-d-aspartic acid, n-hydroxymethylnorcotinine, malic acid, lysopc (24:1 (15z)), linolelaidic acid, l-alloisoleucine, l-alanine, humulinone, glutaric acid, gamma-linolenic acid, dihydro-o-methylsterigmatocystin, deoxyuridine, d-phenyllactic acid, carnosine, biliverdin, alanyl-glutamine, 4-imidazolone-5-propionic acid, 3,7-dimethylpurine-2,6-dione, 2-hydroxy-2-methylbutanedioic acid, 1h-pyrimidine-2,4-dione, and (z)-tetracos-15-enoic acid) were dissolved in a diluent (methanol/acetonitrile &#x3d; 1:1) for further&#x20;study.</p>
<p>Details of sample processing, chromatography, mass spectrometry conditions, and data processing are described in <xref ref-type="sec" rid="s12">Supplementary Material S6</xref>, and the MRM parameters of standard substances are given in <xref ref-type="sec" rid="s12">Supplementary Table&#x20;S1</xref>.</p>
<p>Furthermore, receiver operating characteristic (ROC) curve analysis and area calculation curve (AUC) under ROC were performed to evaluate the change in the diagnostic ability of potential biomarkers.</p>
</sec>
<sec id="s2-13">
<title>Statistical Analysis</title>
<p>All values are presented as the mean&#x20;&#xb1; standard deviation (SD). The significance of differences among the groups was determined by one-way analysis of variance (ANOVA) using the statistical package for the social science program (SPSS 19.0, Chicago, IL, United&#x20;States). Statistical significance was set at <italic>p</italic>&#x20;&#x3c;&#x20;0.05.</p>
</sec>
</sec>
<sec sec-type="results|discussion" id="s3">
<title>Results and Discussion</title>
<sec id="s3-1">
<title>Splitting HLJDD Fractions and Establishment of HPLC Fingerprints</title>
<p>HLJDD was split into five fractions: CPF (yield, 7.200&#x20;&#xb1; 0.731%, <italic>n</italic>&#x20;&#x3d; 5), PEF (yield, 0.0108&#x20;&#xb1; 0.002%, <italic>n</italic>&#x20;&#x3d; 5), 40AEF (yield, 3.580&#x20;&#xb1; 0.179%, <italic>n</italic>&#x20;&#x3d; 5), 90AEF (yield, 3.60&#x20;&#xb1; 0.752%, <italic>n</italic>&#x20;&#x3d; 5), and WEF (yield, 7.880&#x20;&#xb1; 0.928%, <italic>n</italic>&#x20;&#x3d; 5). The HPLC fingerprints of four fractions (WEF, 40AEF, 90AEF, and PEF) were successfully established, and the similarity of eight batches of samples was above 0.9, suggesting that the stability of the process was relatively good (<xref ref-type="sec" rid="s12">Supplementary Figures S1&#x2013;S4</xref>).</p>
</sec>
<sec id="s3-2">
<title>Qualitative Analysis by UPLC-Q-TOF/MS</title>
<p>According to the analysis of the mass fragment information of each chemical component in the Massbank database, 72 chemical components were identified and compared with the literature data. Among these major constituents, 15 alkaloids, 22 flavonoids, 6 iridoids, 18 organic acids and amino acids, and 11 other constituents were identified in this experiment (<xref ref-type="table" rid="T1">Table&#x20;1</xref>).</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>UPLC-Q-TOF/MS identification of the constituents in HLJDD.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">NO.</th>
<th align="center">t<sub>R</sub> (min)</th>
<th align="left"/>
<th align="center">Positive ion MS</th>
<th align="center">Negative ion MS</th>
<th align="center">Formula</th>
<th align="center">Identifcation</th>
<th align="center">Positive ion MS/MS</th>
<th align="center">Negative ion MS/MS</th>
<th align="center">Relegation</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1</td>
<td align="char" char=".">0.58</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">191.0558</td>
<td align="left">C<sub>7</sub>H<sub>12</sub>O<sub>6</sub>
</td>
<td align="left">Quinic acid</td>
<td align="center">-</td>
<td align="center">191.0554, 127.0395, 85.0289</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">2</td>
<td align="char" char=".">0.63</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="left">-</td>
<td align="char" char=".">133.0142</td>
<td align="left">C<sub>4</sub>H<sub>6</sub>O<sub>5</sub>
</td>
<td align="left">Malic acid</td>
<td align="center">-</td>
<td align="center">115.0030, 71.0134</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">3</td>
<td align="char" char=".">0.63</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">175.1187</td>
<td align="center">-</td>
<td align="left">C<sub>6</sub>H<sub>14</sub>N<sub>4</sub>O<sub>2</sub>
</td>
<td align="left">Arginine</td>
<td align="center">70.0649</td>
<td align="center">-</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">4</td>
<td align="char" char=".">0.65</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">116.0699</td>
<td align="center">-</td>
<td align="left">C<sub>5</sub>H<sub>9</sub>NO<sub>2</sub>
</td>
<td align="left">Proline</td>
<td align="center">70.0648</td>
<td align="center">-</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">5</td>
<td align="char" char=".">0.79</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">182.081</td>
<td align="center">-</td>
<td align="left">C<sub>9</sub>H<sub>11</sub>NO<sub>3</sub>
</td>
<td align="left">Tyrosine</td>
<td align="center">96.0437</td>
<td align="center">-</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">6</td>
<td align="char" char=".">0.81</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">191.0201</td>
<td align="left">C<sub>6</sub>H<sub>8</sub>O<sub>7</sub>
</td>
<td align="left">Citric acid</td>
<td align="center">-</td>
<td align="center">173.0077, 111.0079. 87.0080</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">7</td>
<td align="char" char=".">0.86</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">268.1041</td>
<td align="left">-</td>
<td align="left">C<sub>10</sub>H<sub>13</sub>N<sub>5</sub>O<sub>4</sub>
</td>
<td align="left">Adenosine</td>
<td align="center">136.0310, 119.0341</td>
<td align="center">-</td>
<td align="left">Nitrogen glycosides</td>
</tr>
<tr>
<td align="left">8</td>
<td align="char" char=".">1.02</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">132.1011</td>
<td align="center">-</td>
<td align="left">C<sub>6</sub>H<sub>13</sub>NO<sub>2</sub>
</td>
<td align="left">Isoleucine</td>
<td align="center">86.0960, 69.0688</td>
<td align="center">-</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">9</td>
<td align="char" char=".">1.51</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">139.0384</td>
<td align="center">-</td>
<td align="left">C<sub>7</sub>H<sub>6</sub>O<sub>3</sub>
</td>
<td align="left">3.4.Dihydroxybenzaldehyde</td>
<td align="center">136.0181, 119.0160, 108.0228. 81.0360</td>
<td align="center">-</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">10</td>
<td align="char" char=".">1.53</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">166.0859</td>
<td align="center">-</td>
<td align="left">C<sub>9</sub>H<sub>11</sub>NO<sub>2</sub>
</td>
<td align="left">Phenylalanine</td>
<td align="center">120.0801, 103.0534. 91.0538. 77.0380</td>
<td align="center">-</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">11</td>
<td align="char" char=".">1.6</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">127.0383</td>
<td align="center">-</td>
<td align="left">C<sub>6</sub>H<sub>6</sub>O<sub>3</sub>
</td>
<td align="left">Maltol</td>
<td align="center">103.0548. 77.0385</td>
<td align="left">-</td>
<td align="left">Saccharides</td>
</tr>
<tr>
<td align="left">12</td>
<td align="char" char=".">1.64</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">197.0458</td>
<td align="left">C<sub>9</sub>H<sub>10</sub>O<sub>5</sub>
</td>
<td align="left">danshensu</td>
<td align="center">-</td>
<td align="center">179.0351, 135.0453</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">13</td>
<td align="char" char=".">1.71</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">391.1240</td>
<td align="left">C<sub>16</sub>H<sub>24</sub>O<sub>11</sub>
</td>
<td align="left">Shanzhiside</td>
<td align="center">-</td>
<td align="center">229.0714, 185.0821, 167.0714</td>
<td align="left">Iridoid</td>
</tr>
<tr>
<td align="left">14</td>
<td align="char" char=".">1.78</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">373.1135</td>
<td align="left">C<sub>16</sub>H<sub>22</sub>O<sub>10</sub>
</td>
<td align="left">Geniposidic acid</td>
<td align="center">-</td>
<td align="center">211.0611, 149.0609, 123.0446</td>
<td align="left">Iridoid</td>
</tr>
<tr>
<td align="left">15</td>
<td align="char" char=".">2.21</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">208.0974</td>
<td align="center">-</td>
<td align="left">C<sub>11</sub>H<sub>13</sub>NO<sub>3</sub>
</td>
<td align="left">Hydrastinine</td>
<td align="center">190.086, 175.0612, 147.0432</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">16</td>
<td align="char" char=".">2.28</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">192.0419</td>
<td align="center">-</td>
<td align="left">C<sub>10</sub>H<sub>8</sub>O<sub>4</sub>
</td>
<td align="left">7,8-Dihydroxy-4-methylcoumarin</td>
<td align="center">175.0386, 147.0428, 119.0482, 91.0543</td>
<td align="center">-</td>
<td align="left">Coumarin</td>
</tr>
<tr>
<td align="left">17</td>
<td align="char" char=".">2.98</td>
<td align="left">[M &#x2b; Na]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">427.1201</td>
<td align="center">-</td>
<td align="left">C<sub>17</sub>H<sub>24</sub>O<sub>11</sub>
</td>
<td align="left">Gardenoside</td>
<td align="center">265.0683, 247.0575, 233.6419, 215.0310</td>
<td align="center">-</td>
<td align="left">Iridoid</td>
</tr>
<tr>
<td align="left">18</td>
<td align="char" char=".">2.33</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">188.0704</td>
<td align="center">-</td>
<td align="left">C<sub>11</sub>H<sub>9</sub>NO<sub>2</sub>
</td>
<td align="left">3-Indoleacrylic acid</td>
<td align="center">143.0727, 118.0647</td>
<td align="center">-</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">19</td>
<td align="char" char=".">2.33</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">205.0969</td>
<td align="center">-</td>
<td align="left">C<sub>11</sub>H<sub>12</sub>N<sub>2</sub>O<sub>2</sub>
</td>
<td align="left">Tryptophan</td>
<td align="center">188.0694</td>
<td align="center">-</td>
<td align="left">Amino acid</td>
</tr>
<tr>
<td align="left">20</td>
<td align="char" char=".">2.41</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">272.1279</td>
<td align="center">-</td>
<td align="left">C<sub>16</sub>H<sub>17</sub>NO<sub>3</sub>
</td>
<td align="left">Higenamine</td>
<td align="center">255.1015, 161.0590, 107.0488</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">21</td>
<td align="char" char=".">2.67</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">153.0194</td>
<td align="left">C<sub>7</sub>H<sub>6</sub>O<sub>4</sub>
</td>
<td align="left">Gentisic acid</td>
<td align="center">-</td>
<td align="center">108.0229. 81.0348. 53.0394</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">22</td>
<td align="char" char=".">2.89</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">369.1516</td>
<td align="left">C<sub>16</sub>H<sub>26</sub>O<sub>8</sub>
</td>
<td align="left">Jasminoside B</td>
<td align="center">-</td>
<td align="center">339.1420</td>
<td align="left">Monoterpenoids</td>
</tr>
<tr>
<td align="left">23</td>
<td align="char" char=".">2.9</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">355.102</td>
<td align="char" char=".">353.0874</td>
<td align="left">C<sub>16</sub>H<sub>18</sub>O<sub>9</sub>
</td>
<td align="left">Chlorogenic acid</td>
<td align="left">163.0380, 145.0279, 135.0437</td>
<td align="center">353.0874, 91.0561, 179.0358, 35.0448</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">24</td>
<td align="char" char=".">3.09</td>
<td align="left">[M &#x2b; Na]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">395.1305</td>
<td align="center">-</td>
<td align="left">C<sub>17</sub>H<sub>24</sub>O<sub>9</sub>
</td>
<td align="left">Eleutheroside B</td>
<td align="left">364.1139, 232.0708</td>
<td align="center">-</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">25</td>
<td align="char" char=".">3.12</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">353.0873</td>
<td align="left">C<sub>16</sub>H<sub>18</sub>O<sub>9</sub>
</td>
<td align="left">4-Ocaffeoylquinic acid</td>
<td align="center">-</td>
<td align="center">353.0877, 173.0454, 135.0446</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">26</td>
<td align="char" char=".">3.28</td>
<td align="left">[M &#x2b; HCOOH-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">595.1876</td>
<td align="left">C<sub>23</sub>H<sub>34</sub>O<sub>15</sub>
</td>
<td align="left">Genipin gentiobioside</td>
<td align="center">-</td>
<td align="center">517.1567, 323.0988, 225.0769, 207.0663</td>
<td align="left">Iridoid</td>
</tr>
<tr>
<td align="left">27</td>
<td align="char" char=".">3.29</td>
<td align="left">[M &#x2b; Na]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">573.1782</td>
<td align="center">-</td>
<td align="left">C<sub>23</sub>H<sub>34</sub>O<sub>15</sub>
</td>
<td align="left">Genipin-1-gentiobioside</td>
<td align="center">541.1509, 511.1411, 365.1031, 347.0937, 305.0835</td>
<td align="center">-</td>
<td align="left">Iridoid</td>
</tr>
<tr>
<td align="left">28</td>
<td align="char" char=".">3.38</td>
<td align="left">[M &#x2b; Na]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">411.1264</td>
<td align="center">-</td>
<td align="left">C<sub>17</sub>H<sub>24</sub>O<sub>10</sub>
</td>
<td align="left">Geniposide<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">379.0960, 349.0902, 249.0728, 231.0618,217.0467, 203.0527, 185.0415, 147.0411</td>
<td align="center">-</td>
<td align="left">Iridoid</td>
</tr>
<tr>
<td align="left">29</td>
<td align="char" char=".">3.76</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">169.0755</td>
<td align="center">-</td>
<td align="left">C<sub>11</sub>H<sub>8</sub>N<sub>2</sub>
</td>
<td align="left">Norharmane</td>
<td align="center">115.0539</td>
<td align="center">-</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">30</td>
<td align="char" char=".">3.77</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">341.1622</td>
<td align="left">C<sub>20</sub>H<sub>24</sub>NO<sub>4</sub>
</td>
<td align="left">Phellodendrine</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">31</td>
<td align="char" char=".">4.8</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">195.0657</td>
<td align="center">-</td>
<td align="left">C<sub>10</sub>H<sub>10</sub>O<sub>4</sub>
</td>
<td align="left">Ferulic Acid<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">145.0279, 117.0326. 89.0379</td>
<td align="center">-</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">32</td>
<td align="char" char=".">5.14</td>
<td align="left">[M &#x2b; NH<sub>4</sub>]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">207.0646</td>
<td align="center">-</td>
<td align="left">C<sub>11</sub>H<sub>12</sub>O<sub>5</sub>
</td>
<td align="left">3,5-Dimethoxy-4-hydroxycinnamic acid</td>
<td align="center">192.0410, 147.0445, 119.0498</td>
<td align="center">-</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">33</td>
<td align="char" char=".">5.18</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>/[M-H]<sup>-</sup>
</td>
<td align="char" char=".">611.1601</td>
<td align="char" char=".">609.1458</td>
<td align="left">C<sub>27</sub>H<sub>30</sub>O<sub>16</sub>
</td>
<td align="left">Rutin</td>
<td align="center">303.0491</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">34</td>
<td align="char" char=".">5.18</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">303.0494</td>
<td align="center">-</td>
<td align="left">C<sub>15</sub>H<sub>10</sub>O<sub>7</sub>
</td>
<td align="left">Quercetin</td>
<td align="center">-</td>
<td align="center">285.0409, 257.0419, 229.0484</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">35</td>
<td align="char" char=".">4.8</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">322.1069</td>
<td align="center">-</td>
<td align="left">C<sub>19</sub>H<sub>15</sub>NO<sub>4</sub>
</td>
<td align="left">Berberrubine</td>
<td align="center">307.0814, 294.1114, 279.0865</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">36</td>
<td align="char" char=".">5.54</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">509.1281</td>
<td align="center">-</td>
<td align="left">C<sub>23</sub>H<sub>24</sub>O<sub>13</sub>
</td>
<td align="left">Syringetin 3-glucoside</td>
<td align="center">347.0758, 332.0528</td>
<td align="center">-</td>
<td align="left">Phenylethanoid glycoside</td>
</tr>
<tr>
<td align="left">37</td>
<td align="char" char=".">5.76</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">352.1174</td>
<td align="center">-</td>
<td align="left">C<sub>20</sub>H<sub>17</sub>NO<sub>5</sub>
</td>
<td align="left">8-O-berberine</td>
<td align="center">337.0929, 308.0900</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">38</td>
<td align="char" char=".">5.78</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">515.1188</td>
<td align="left">C<sub>25</sub>H<sub>24</sub>O<sub>12</sub>
</td>
<td align="left">Isochlorogenic acid A<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="left">Organic acid</td>
</tr>
<tr>
<td align="left">39</td>
<td align="char" char=".">5.83</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">356.1846</td>
<td align="center">-</td>
<td align="left">C<sub>21</sub>H<sub>25</sub>NO<sub>4</sub>
</td>
<td align="left">Tetrahydropalmatine</td>
<td align="center">192.1004, 177.0770, 165.0915</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">40</td>
<td align="char" char=".">5.89</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">623.1974</td>
<td align="left">C<sub>29</sub>H<sub>36</sub>O<sub>15</sub>
</td>
<td align="left">Methyl hesperidin</td>
<td align="center">-</td>
<td align="center">461.1673, 415.1035, 295.0622, 161.0248</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">41</td>
<td align="char" char=".">5.99</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">354.1337</td>
<td align="center">-</td>
<td align="left">C<sub>20</sub>H<sub>19</sub>NO<sub>5</sub>
</td>
<td align="left">Protopine<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">42</td>
<td align="char" char=".">6.14</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">336.1221</td>
<td align="center">-</td>
<td align="left">C<sub>20</sub>H<sub>18</sub>NO<sub>4</sub>
</td>
<td align="left">Epiberberine</td>
<td align="center">320.0892, 292.0942</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">43</td>
<td align="char" char=".">6.25</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">338.1393</td>
<td align="center">-</td>
<td align="left">C<sub>20</sub>H<sub>20</sub>NO<sub>4</sub>
</td>
<td align="left">Dihydroberberine</td>
<td align="center">322.1048, 294.1098</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">44</td>
<td align="char" char=".">6.28</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">461.1071</td>
<td align="center">-</td>
<td align="left">C<sub>22</sub>H<sub>21</sub>O<sub>11</sub>
</td>
<td align="left">Oroxylin A 7-O-glucuronide</td>
<td align="center">285.0761, 270.0530</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">45</td>
<td align="char" char=".">6.28</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">523.1435</td>
<td align="left"/>
<td align="left">C<sub>24</sub>H<sub>26</sub>O<sub>13</sub>
</td>
<td align="left">Iridin</td>
<td align="center">361.0900, 331.0438</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">46</td>
<td align="char" char=".">6.35</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">320.0913</td>
<td align="left">-</td>
<td align="left">C<sub>19</sub>H<sub>14</sub>NO<sub>4</sub>
</td>
<td align="left">Coptisine</td>
<td align="center">292.0592</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">47</td>
<td align="char" char=".">6.53</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">352.1197</td>
<td align="center">-</td>
<td align="left">C<sub>21</sub>H<sub>22</sub>NO<sub>4</sub>
</td>
<td align="left">Palmatine<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">336.1232, 308.1289</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">48</td>
<td align="char" char=".">6.71</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">336.1222</td>
<td align="center">-</td>
<td align="left">C<sub>20</sub>H<sub>18</sub>NO<sub>4</sub>
</td>
<td align="left">Berberine<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">320.0876, 306.0749, 304.0956, 292.0942, 278.0787</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">49</td>
<td align="char" char=".">6.8</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">463.0861</td>
<td align="center">-</td>
<td align="left">C<sub>21</sub>H<sub>18</sub>O<sub>12</sub>
</td>
<td align="left">Scutellarin</td>
<td align="center">287.0548, 269.0444, 241.0488</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">50</td>
<td align="char" char=".">6.88</td>
<td align="center">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">417.1173</td>
<td align="center">-</td>
<td align="left">C<sub>21</sub>H<sub>20</sub>O<sub>9</sub>
</td>
<td align="left">Chrysin 8-C-glucopyranoside</td>
<td align="center">399.1088, 297.0758, 267.0653</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">51</td>
<td align="char" char=".">7.08</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">273.0748</td>
<td align="center">-</td>
<td align="left">C<sub>15</sub>H<sub>12</sub>O<sub>5</sub>
</td>
<td align="left">Dihydronorwogonin</td>
<td align="center">169.0124</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">52</td>
<td align="char" char=".">7.17</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">447.0917</td>
<td align="center">-</td>
<td align="left">C<sub>21</sub>H<sub>19</sub>O<sub>11</sub>
</td>
<td align="left">Baicalin<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">271.0581, 169.0123</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">53</td>
<td align="char" char=".">7.22</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">593.1871</td>
<td align="center">-</td>
<td align="left">C<sub>28</sub>H<sub>32</sub>O<sub>14</sub>
</td>
<td align="left">Linarin</td>
<td align="center">447.1269, 285.0755</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">54</td>
<td align="char" char=".">7.42</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">459.0923</td>
<td align="left">C<sub>22</sub>H<sub>20</sub>O<sub>11</sub>
</td>
<td align="left">Wogonoside<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="left"/>
<td align="center">459.0907, 268.0370, 239.0349</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">55</td>
<td align="char" char=".">7.46</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">429.0816</td>
<td align="left">C<sub>21</sub>H<sub>18</sub>O<sub>10</sub>
</td>
<td align="left">Chrysin-7-O-&#x3b2;-d-glucuronide</td>
<td align="center">-</td>
<td align="center">253.0508, 175.0249, 113.0255</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">56</td>
<td align="char" char=".">7.6</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">475.0874</td>
<td align="left">C<sub>22</sub>H<sub>20</sub>O<sub>12</sub>
</td>
<td align="left">Hydroxyl oroxylin A-7-O-&#x3b2;-d-glucutonide</td>
<td align="left"/>
<td align="left">299.0555, 284.0316, 255.0298,175.0246, 113.0241</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">57</td>
<td align="char" char=".">7.75</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="char" char=".">331.0806</td>
<td align="center">-</td>
<td align="left">C<sub>17</sub>H<sub>14</sub>O<sub>7</sub>
</td>
<td align="left">5, 7, 4&#x27; -trihydroxy-3 &#x2032;, 5&#x27; -dimethoxy flavone</td>
<td align="center">-</td>
<td align="center">316.0588, 270.0507</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">58</td>
<td align="char" char=".">8.02</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">299.0555</td>
<td align="left">C<sub>16</sub>H<sub>12</sub>O<sub>6</sub>
</td>
<td align="left">Hispidulin</td>
<td align="left"/>
<td align="center">284.0342, 269.0359, 239.0371, 136.9880</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">59</td>
<td align="char" char=".">8.26</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">260.0906</td>
<td align="left">-</td>
<td align="left">C<sub>14</sub>H<sub>13</sub>NO<sub>4</sub>
</td>
<td align="left">Skimmianine</td>
<td align="center">245.0663, 227.0557</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">60</td>
<td align="char" char=".">8.49</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">975.3713</td>
<td align="left">C<sub>44</sub>H<sub>64</sub>O<sub>24</sub>
</td>
<td align="left">Crocin</td>
<td align="center">-</td>
<td align="center">651.2661, 327.1600</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">61</td>
<td align="char" char=".">9.2</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">299.0557</td>
<td align="left">C<sub>16</sub>H<sub>12</sub>O<sub>6</sub>
</td>
<td align="left">4 -Hydroxywogonina</td>
<td align="center">-</td>
<td align="center">284.0342, 239.0372,136.9880</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">62</td>
<td align="char" char=".">9.28</td>
<td align="left">[M]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">470.1962</td>
<td align="center">-</td>
<td align="left">C<sub>26</sub>H<sub>30</sub>O<sub>8</sub>
</td>
<td align="left">Obaculactone</td>
<td align="center">425.1936, 409.2004</td>
<td align="center">-</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">63</td>
<td align="char" char=".">9.66</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">375.1045</td>
<td align="center">-</td>
<td align="left">C<sub>19</sub>H<sub>18</sub>O<sub>8</sub>
</td>
<td align="left">Casticin</td>
<td align="center">375.0572</td>
<td align="center">-</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">64</td>
<td align="char" char=".">9.72</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">285.0748</td>
<td align="char" char=".">283.0612</td>
<td align="left">C<sub>16</sub>H<sub>12</sub>O<sub>5</sub>
</td>
<td align="left">Wogonin<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">270.0502</td>
<td align="center">283.0608, 163.0027</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">65</td>
<td align="char" char=".">9.81</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">255.0638</td>
<td align="char" char=".">253.0506</td>
<td align="left">C<sub>15</sub>H<sub>10</sub>O<sub>4</sub>
</td>
<td align="left">Chrysin<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">-</td>
<td align="center">209.0616 183.0472, 143.0509, 107.0143</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">66</td>
<td align="char" char=".">9.88</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">315.0852</td>
<td align="center">-</td>
<td align="left">C<sub>17</sub>H<sub>14</sub>O<sub>6</sub>
</td>
<td align="left">3,7-Dihydroxy-3&#x2032;,4&#x2032;-dimethoxyflavone</td>
<td align="center">300.0613, 285.0372, 257.0426</td>
<td align="center">-</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">67</td>
<td align="char" char=".">10.28</td>
<td align="left">[M-H]<sup>-</sup>
</td>
<td align="center">-</td>
<td align="char" char=".">343.0818</td>
<td align="left">C<sub>18</sub>H<sub>16</sub>O<sub>7</sub>
</td>
<td align="left">5, 7-dihydroxy-2 &#x2032;,6 &#x2032;, 8-trimethoxylflavone</td>
<td align="center">-</td>
<td align="center">313.0351, 285.0405, 269.0402</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">68</td>
<td align="char" char=".">10.39</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">286.1431</td>
<td align="center">-</td>
<td align="left">C<sub>17</sub>H<sub>19</sub>NO<sub>3</sub>
</td>
<td align="left">Piperine</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">69</td>
<td align="char" char=".">10.5</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">455.2051</td>
<td align="center">-</td>
<td align="left">C<sub>26</sub>H<sub>30</sub>O<sub>7</sub>
</td>
<td align="left">Obacunone<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">437.1929, 409.2004</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">70</td>
<td align="char" char=".">10.32</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">288.1585</td>
<td align="center">-</td>
<td align="left">C<sub>18</sub>H<sub>13</sub>N<sub>3</sub>O</td>
<td align="left">Rutecarpine<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="left">Alkaloids</td>
</tr>
<tr>
<td align="left">71</td>
<td align="char" char=".">12.49</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">299.1604</td>
<td align="center">-</td>
<td align="left">C<sub>19</sub>H<sub>22</sub>O<sub>3</sub>
</td>
<td align="left">Auraptene<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="left">Flavonoid</td>
</tr>
<tr>
<td align="left">72</td>
<td align="char" char=".">18.82</td>
<td align="left">[M &#x2b; H]<sup>&#x2b;</sup>
</td>
<td align="char" char=".">397.3814</td>
<td align="center">-</td>
<td align="left">C<sub>29</sub>H<sub>50</sub>O</td>
<td align="left">&#x3b2;-Sitosterol</td>
<td align="center">147.123</td>
<td align="center">-</td>
<td align="left">Sterols</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="Tfn1">
<label>a</label>
<p>Indicates comparison with reference substance.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<sec id="s3-2-1">
<title>Alkaloids</title>
<p>
<italic>Coptis chinensis</italic> Franch. and <italic>Phellodendron amurense</italic> Rupr. were found to be the main drugs of HLJDD, and contained large quantities of alkaloids, including coptisine, palmatine, and berberine. These ingredients of HLJDD exhibit a wide range of pharmacological effects and biological activities (<xref ref-type="bibr" rid="B8">Chen et&#x20;al., 2020a</xref>). A total of 15 alkaloid chemical components (compound 15, 20, 30, 35, 37, 39, 41-43, 46-48, 59, 66, and 70) were identified in this study: hydrastinine, higenamine, phellodendrine, berberrubine, 8-O-berberine, tetrahydropalmatine, protopine, epiberberine, dihydroberberine, coptisine, palmatine, berberine, skimmianine, piperine, and rutecarpine. Berberine was used an example to evaluate the possible cleavage pathway of alkaloids. Compound 48 was determined as berberine using pure standard data and combining the fragmentation rules with data reported in the literature. First, berberine showed fragment ions at <italic>m/z</italic> 336.1222 [M]<sup>&#x2b;</sup>, 320.0876&#x20;[M-CH<sub>4</sub>]<sup>&#x2b;</sup>, 306.0749&#x20;[M-CH<sub>4</sub>-CH<sub>2</sub>]<sup>&#x2b;</sup>, 292.0942&#x20;[M-CH<sub>4</sub>-CO]<sup>&#x2b;</sup>, and 278.0787 [MCH<sub>4</sub>-CO-CH<sub>2</sub>]<sup>&#x2b;</sup>. The fragmentation at <italic>m/z</italic> 320.0876&#x20;[M-CH<sub>4</sub>]<sup>&#x2b;</sup> was acquired at <italic>m/z</italic> 336.1222 [M]<sup>&#x2b;</sup> through the loss of a molecule of CH<sub>3</sub> and a rearrangement reaction. Further, this fragmentation lost the methyl group at the end site to form fragment ions at <italic>m/z</italic> 306.0749&#x20;[M-CH<sub>4</sub>-CH<sub>2</sub>]<sup>&#x2b;</sup>; on the other hand, this fragmentation also resulted in the formation fragment ions at <italic>m/z</italic> 292.0942&#x20;[M-CH<sub>4</sub>-CO]<sup>&#x2b;</sup> by the cracking of the side benzene ring and the loss of a molecule of CO, and continued to lose of the side ring-CH<sub>2</sub> fragment and formed fragment ions at <italic>m/z</italic> 278.0787 [MCH<sub>4</sub>-CO-CH<sub>2</sub>]<sup>&#x2b;</sup>. Combined with standard substance analysis and the literature (<xref ref-type="bibr" rid="B70">Zuo et&#x20;al., 2014</xref>) this was inferred as berberine (<xref ref-type="sec" rid="s12">Supplementary Figure&#x20;S5</xref>).</p>
</sec>
<sec id="s3-2-2">
<title>Flavonoids</title>
<p>Flavonoids are the main active components in the form of either sugar glucoside or free molecules in natural plants. They possess many bio-activities, including lipid-lowering (<xref ref-type="bibr" rid="B64">Yao et&#x20;al., 2014</xref>), antitumor (<xref ref-type="bibr" rid="B51">Wang et&#x20;al., 2020</xref>), anti-oxidation (<xref ref-type="bibr" rid="B55">Wang et&#x20;al., 2021</xref>), and anti-bacterial (<xref ref-type="bibr" rid="B41">Rasouli et&#x20;al., 2019</xref>). Scutellariae Radix in HLJDT contains a large amount of flavonoids, such as quercetin, rutin, baicalin, wogonin, and chrysin (<xref ref-type="bibr" rid="B63">Yang et&#x20;al., 2020</xref>). A total of 22 flavonoids (compound 33-34, 40, 44-45, 49-58, 60-61, 64-65, 67, 69, and 71) were identified in this study: rutin, quercetin, methyl hesperidin, oroxylin A 7-O-glucuronide, iridin, scutellarin, chrysin 8-C-glucopyranoside, dihydronorwogonin, baicalin, linarin, wogonoside, chrysin-7-O-&#x3b2;-d-glucuronide, Hydroxyl oroxylin A-7-O-&#x3b2;-d-glucutonide, 5,7,4&#x2032;-trihydroxy-3&#x2032;, 5&#x2032;-dimethoxy, hispidulin, crocin, 4-hydroxywogonina, wogonin, chrysin, 5, 7-dihydroxy-2&#x2032;,6&#x2032;, 8-trimethoxylflavone, obacunone, and auraptene. Of these, baicalin, wogonoside, wogonin, chrysin, obacunone, and auraptene were identified using pure standards. Flavonoids often exist in the form of flavonoid glycosides. Therefore, the fragmentation regularity of flavonoids mainly includes the breakage of glycosidic bonds and flavonoid aglycon (<xref ref-type="bibr" rid="B14">Ferreres et&#x20;al., 2004</xref>). For example, in the positive ion mode, baicalin (compound 19), excimer ions broke the glycosidic bond and formed fragment ions <italic>at m/z</italic> 271.0581 [M &#x2b; H-GlucA]<sup>&#x2b;</sup>. Furthermore, the flavonoid aglycon was opened and cleaved to <italic>m/z</italic> 169.0123 [M &#x2b; H-GlucA-C<sub>7</sub>H<sub>2</sub>O]<sup>&#x2b;</sup>. The mass spectrometry cleavage pathway is illustrated in <xref ref-type="sec" rid="s12">Supplementary Figure&#x20;S6</xref>.</p>
</sec>
<sec id="s3-2-3">
<title>Iridoids</title>
<p>Iridoids mainly come from gardeniae fructus and have hypoglycemic, anti-inflammatory, and anti-tumor effects (<xref ref-type="bibr" rid="B20">Hung et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B25">Koo et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B59">Xu and Hao, 2004</xref>). A total of six iridoids (compounds 13, 14, 17, 26, 27, and 28) were identified in this study. These were shanzhiside, geniposidic acid, gardenoside, genipin gentiobioside, genipin-1-gentiobioside, and geniposide by combining the fragmentation rules with data from the literature. Geniposide was identified using a standard. For example, the mass spectrometry cleavage pathway of geniposide (compound 28) is shown in <xref ref-type="sec" rid="s12">Supplementary Figure S7</xref>. The molecular ion peak of <italic>m/z</italic> 411.1264 [M &#x2b; Na]<sup>&#x2b;</sup> was obtained in positive mode, and hydrogen on the double bond appeared lively due to the influence of oxygen atoms, combining with the oxygen on the ester bond. After fracturing, the mother nucleus lost a molecule of CH<sub>3</sub>OH to form a fragment ion at <italic>m/z</italic> 379.0960, which continued to lose glucose or formaldehyde molecules to form fragment ions at <italic>m/z</italic> 217.0467 or 349.0902. The glycosidic bond of geniposide has two cleavage pathways. On the one hand, active hydrogen on the mother nucleus transferred and formed fragment ions at <italic>m/z</italic> 231.0618 and complete glucose fragment ions at <italic>m/z</italic> 203.0527. On the other hand, the active hydrogen on the glucose transferred and formed fragment ions at <italic>m/z</italic> 249.0728 and complete glucose fragment ions at <italic>m/z</italic> 185.0415. In summary, combined with standard substances and the literature, it was inferred as geniposide (<xref ref-type="bibr" rid="B70">Zuo et&#x20;al., 2014</xref>).</p>
</sec>
<sec id="s3-2-4">
<title>Organic Acids and Amino Acid</title>
<p>Many organic acid compounds are mainly classified into small molecule phenolic acid compounds and acylated organic acid compounds according to their structure (<xref ref-type="bibr" rid="B26">Krzymi&#x144;ska et&#x20;al., 2020</xref>). A total of 18 organic acid and amino acid chemical components (compound 1-6, 8-10, 12, 18-19, 21, 23, 25, 31-32, and 70) were identified in this study: quinic acid, malic acid, arginine, proline, tyrosine, citric acid, isoleucine, 3,4-dihydroxybenzaldehyde, phenylalanine, danshensu, 3-indoleacrylic acid, tryptophan, 3,5-dimethoxy-4-hydroxycinnamic acid, gentisic acid, chlorogenic acid, 4-ocaffeoylquinic acid, ferulic acid, and isochlorogenic acid. In negative ion mode, the parent ion of the small-molecule phenolic acid compound easily lost the H<sub>2</sub>O and CO<sub>2</sub> groups, and the acylated organic acid easily produced fragment ions at <italic>m/z</italic> 191 [C<sub>7</sub>H<sub>11</sub>O<sub>6</sub>]<sup>&#x2212;</sup>, 179 [C<sub>9</sub>H<sub>7</sub>O<sub>4</sub>]<sup>&#x2212;</sup>, 173 [C<sub>7</sub>H<sub>9</sub>O<sub>5</sub>]<sup>&#x2212;</sup>, 163 [C<sub>9</sub>H<sub>7</sub>O<sub>3</sub>]<sup>&#x2212;</sup>, and 135 [C<sub>8</sub>H<sub>7</sub>O<sub>2</sub>]<sup>&#x2212;</sup>. Similarly, for compound 25, ions at <italic>m/z</italic> 353.0878&#x20;[M-H]<sup>&#x2212;</sup>, 335.0730 [M-H-H<sub>2</sub>O]<sup>&#x2212;</sup>, 191.0558 [M-H-Caffeoyl]<sup>&#x2212;</sup>, 179.0348 [M-H-Quinic]<sup>&#x2212;</sup>, 173.0454 [M-H-Caffeoyl-H<sub>2</sub>O]<sup>&#x2212;</sup>, 135.0447 [M-H-Quinic-CO<sub>2</sub>]<sup>&#x2212;</sup> were acquired in negative mode, and those at <italic>m/z</italic> 335.0730 [M-H-H<sub>2</sub>O]<sup>&#x2212;</sup>, 191.0558 [M-H-Caffeoyl]<sup>&#x2212;</sup>, and 179.0348 [M-H-Quinic]<sup>&#x2212;</sup>, corresponding to NLs of 18&#xa0;Da (H2O), 162&#xa0;Da (caffeoyl), 174&#xa0;Da (quinic), and the parent ion for <italic>m/z</italic> 353.0878&#x20;[M-H]<sup>&#x2212;</sup>, were indicative of 4-ocaffeoylquinic acid (<xref ref-type="bibr" rid="B17">Guo et&#x20;al., 2014</xref>), indicating formula C<sub>16</sub>H<sub>18</sub>O<sub>9</sub>. The cleavage pathway is shown in Figure&#x20;S8.</p>
</sec>
<sec id="s3-2-5">
<title>Others</title>
<p>A total of 11 other components (compounds 7, 11, 16, 22, 24, 29, 36, 62, 63, 66, and 72) were identified in this study: adenosine, maltol, 7,8-dihydroxy-4-methylcoumarin, jasminoside B, eleutheroside B, norharmane, syringetin 3-glucoside, obaculactone, casticin, 3,7-dihydroxy-3&#x2032;,4&#x2032;-dimethoxyflavone, and &#x3b2;-sitosterol.</p>
</sec>
</sec>
<sec id="s3-3">
<title>Non-similarity Degree Evaluation of Chemical Fractions</title>
<sec id="s3-3-1">
<title>Qualitative Analysis</title>
<p>The accumulative variance contributions of the first three principal components were 94.95% (positive ion mode) and 94.34% (negative ion mode), respectively, indicating that the PCA method achieved a higher recognition rate. As shown in <xref ref-type="sec" rid="s12">Supplementary Figure S9A,B</xref>, a clear separation was observed among the four chemical fractions, indicating that the degree of similarity of the chemical fractions was small. Furthermore, HCA was performed using the data of 72 chemical components, and a clear separation was observed among the four chemical fractions as well. In addition, we intuitively understood the main components of the four chemical fractions. As shown in <xref ref-type="sec" rid="s12">Supplementary Figure S10</xref>, the main components of 40AEF, 90AEF, PEF, and WEF were alkaloids, flavonoids, and a few alkaloids, iridoids, organic acids, and amino&#x20;acids.</p>
</sec>
<sec id="s3-3-2">
<title>Quantitative Analysis</title>
<p>Further, the non-similarity degree (NSD) was measured by the cross-analysis of the peak areas of crude drug, angle cosine analysis method, and correlation coefficient analysis method, and was used to quantitatively analyze the non-overlapping property of the chemical fractions. As shown in <xref ref-type="sec" rid="s12">Supplementary Table S2</xref>, the results showed that NSD was higher than 96.27% among the different fractions.</p>
<p>In this study, 72 chemical components were identified, and the main components of 40AEF, 90AEF, PEF, and WEF were alkaloids, flavonoids, alkaloids, iridoids, organic acids, and amino acids. Meanwhile, the non-overlapping property of the chemical fractions was measured by cross-analysis of the peak areas of the crude drug, angle cosine analysis method, and correlation coefficient analysis method, which was used to verify the results of the HPLC data. As shown in <xref ref-type="sec" rid="s12">Supplementary Table S3</xref>, the analysis results showed that NSD was higher than 81.00% among the different fractions.</p>
</sec>
</sec>
<sec id="s3-4">
<title>Evaluation of Skin Lesions on AD Mice Model Treated With HLJDD and its Fractions</title>
<p>The AD model was established with DNFB and used to investigate the therapeutic effects of HLJDD (12.8&#xa0;g/kg) and its fractions (CPF, 40AEF, 90AEF, WEF, and PEF). In comparison with the normal control group, dorsal skin from the AD model group demonstrated severe lesions and showed typical allergic responses, including itching, increased ear and epidermal thickness, swelling, dryness, and erythema. After treatment, the above symptoms in the dorsal skin of mice in the HLJDD group and groups treated with its fractions were remarkably improved (<xref ref-type="fig" rid="F1">Figures 1A&#x2013;H</xref>), especially in the HLJDD, 40AEF, and 90AEF groups. Furthermore, the results of clinical scores indicated that the scores of the AD model group were significantly higher than those of the normal control group, while the HLJDD, CPF, and 40AEF groups showed significantly lower scores (<italic>p</italic>&#x20;&#x3c; 0.01) (<xref ref-type="fig" rid="F1">Figure&#x20;1I</xref>). In addition, the inhibitory rate of ear swelling was significantly increased in the HLJDD, CPF, and 40AEF groups compared to the AD model group (<xref ref-type="fig" rid="F1">Figure&#x20;1J</xref>). These results indicated that HLJDD and its fractions had significant ameliorating effects on AD model mice, especially HLJDD, 40AEF, and&#x20;CPF.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>The atopic dermatitis animal model and HLJDD and its fractions treatment. (a) normal control group, (b) AD model group, (c) HLJDD group, (d) CPF group, (e) 40AEF group, (f) 90AEF group, (g) WEF group, (h) PEF group. Date was mean&#x20;&#xb1; SEM (<italic>n</italic>&#x20;&#x3d; 8). <sup>&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.05, <sup>&#x23;&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs.</italic> normal group; &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs</italic>. AD model group. <bold>(A&#x2013;H)</bold> Clinical features of dorsal skin lesions in each group; <bold>(I)</bold> The score of dorsal skin lesions in each group; <bold>(J)</bold> The difference in thickness of left and right ears of mice in each group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g001.tif"/>
</fig>
</sec>
<sec id="s3-5">
<title>Histological Examination</title>
<p>To further demonstrate the therapeutic effect of HLJDD and its fractions, we compared the pathology of DNFB-induced skin lesions with or without HLJDD and its fractions (<xref ref-type="fig" rid="F2">Figure&#x20;2</xref>). In the normal control group, the subcutaneous structure was intact and lined with a thin epithelial layer, showing no signs of inflammatory cell infiltration. In the AD model group, thickening of the epidermis was obvious, where hyperkeratosis and thickening of the spinous cell layer had occurred. Inflammatory cells infiltrating the dermis were also observed in the AD model group. A similar pathology was observed in the 90AEF, WEF, and PEF groups, however, the thickening of epidermis and the infiltration of inflammatory cells were significantly reduced in the HLJDD, CPF, and 40AEF groups, suggesting that HLJDD, CPF, and 40AEF could indeed improve DNFB-induced skin lesions.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Hematoxylin and eosin (H&#x26;E) staining. <bold>(A)</bold> normal control group, <bold>(B)</bold> AD model group, <bold>(C)</bold> HLJDD group, <bold>(D)</bold> CPF group, <bold>(E)</bold> 40AEF group, <bold>(F)</bold> 90AEF group, <bold>(G)</bold> WEF group, <bold>(H)</bold> PEF&#x20;group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g002.tif"/>
</fig>
</sec>
<sec id="s3-6">
<title>Analysis of HLJDD and its Fractions on Total Serum IgE, Histamine, and Relative Cytokines</title>
<p>To assess the therapeutic effects of HLJDD and its fractions on AD model mice, the total serum IgE and histamine levels were detected by ELISA, and the levels of IL-13, IL-17A, IL-3, IL-31, IL-33, IL4, IL-5, and TSLP were detected using Luminex 200&#x2122;. The serum IL-13, IL-17A, IL-3, IL-31, IL-33, IL4, IL-5, TSLP, IgE, and histamine levels were significantly increased in the AD model group compared to the normal control group. However, HLJDD markedly decreased serum IL-13, IL-17A, IL-3, IL-31, IL-33, IL4, IL-5, TSLP, and histamine levels; CPF and 40AEF markedly decreased serum IL-13, IL-17A, IL-3, IL-31, IL-33, IL4, IL-5, TSLP, IgE, and histamine levels; 90AEF markedly decreased serum IL-13, IL-17A, IL-3, IL-31, IL4, IL-5, TSLP, IgE, and histamine levels; WEF markedly decreased serum IL-13, IL-17A, IL-3, IL4, IL-5, TSLP, and histamine levels; PEF markedly decreased serum IL-3, IL-33, IL4, IL-5, and IgE levels. These results indicate that HLJDD and its fractions (especially HLJDD, 40AEF, and 90AEF) had significant ameliorating effects on AD model mice by downregulating the total serum IgE, histamine, and relative cytokines (<xref ref-type="fig" rid="F3">Figures 3A&#x2013;J</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>The atopic dermatitis animal model and HLJDD and its fractions treatment <bold>(A&#x2013;J)</bold>. (a) normal group, (b) AD model group, (c) WD group, (d) CPF (300&#xa0;mg/kg) group, (e) 40AEF group, (f) 90AEF group, (g) WEF group, (h) PEF group. Date was mean&#x20;&#xb1; SEM (<italic>n</italic>&#x20;&#x3d; 8). &#x23;&#x23;<italic>p</italic>&#x20;&#x3c; 0.01 vs. normal group; &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01 vs. AD model&#x20;group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g003.tif"/>
</fig>
</sec>
<sec id="s3-7">
<title>The Effect of HLJDD and its Fractions on HRH4, IL-4R&#x3b1;, and JAK1 mRNA Levels</title>
<p>Real-time PCR analysis was performed to examine whether HLJDD affected HRH4, IL-4R&#x3b1;, and JAK1 mRNA expression. As shown in <xref ref-type="fig" rid="F4">Figure&#x20;4A</xref>, the relative content of HRH4 mRNA in the AD model group was increased compared to that in the normal control group (<italic>p</italic>&#x20;&#x3c; 0.01), and the HLJDD, CPF, and 40AEF groups were significantly decreased compared with the AD model group (<italic>p</italic>&#x20;&#x3c; 0.01). As illustrated in <xref ref-type="fig" rid="F4">Figure&#x20;4B</xref>, the relative content of IL-4R&#x3b1; mRNA in the AD model group was increased compared to that in the normal control group (<italic>p</italic>&#x20;&#x3c; 0.01), and the HLJDD, CPF, 40AEF, 90AEF, WEF, and PEF groups were significantly decreased compared with the AD model group (<italic>p</italic>&#x20;&#x3c; 0.01). However, as illustrated in <xref ref-type="fig" rid="F4">Figure&#x20;4C</xref>, HLJDD and its fractions did not show an inhibitory effect on the expression of JAK1&#x20;mRNA.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Effects of HLJDD and its fractins on mRNA expression of HRH4&#x20;<bold>(A)</bold>, IL-4R&#x3b1; <bold>(B)</bold>, and JAK1&#x20;<bold>(C)</bold> in the mice. (a) normal control group, (b) AD model group, (c) HLJDD group, (d) CPF group, (e) 40AEF group, (f) 90AEF group, (g) WEF group, (h) PEF group. Date was mean&#x20;&#xb1; SEM (<italic>n</italic>&#x20;&#x3d; 8). <sup>&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.05, <sup>&#x23;&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs.</italic> normal group; &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs</italic>. AD model&#x20;group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g004.tif"/>
</fig>
</sec>
<sec id="s3-8">
<title>HLJDD and its Fractions Decreased HRH4, IL-4R&#x3b1;, and JAK1 Protein Expression in AD Model Mice</title>
<p>In addition, HRH4, IL-4R&#x3b1;, JAK1, and p-JAK1 protein expression was detected by western blotting. As shown in <xref ref-type="fig" rid="F5">Figures 5A&#x2013;E</xref>, HRH4, IL-4R&#x3b1;, and p-JAK1 protein expression was significantly upregulated in the AD model group (<italic>p</italic>&#x20;&#x3c; 0.01). After treatment, HLJDD, CPF, and 40AEF significantly reduced the levels of HRH4, IL-4R&#x3b1;, and p-JAK1 (<italic>p</italic>&#x20;&#x3c; 0.01), and 90AEF, WEF, and PEF significantly reduced the levels of IL-4R&#x3b1; and p-JAK1 (<italic>p</italic>&#x20;&#x3c; 0.01). Interestingly, there were no significant changes in the protein expression of&#x20;JAK1.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Effects of HLJDD and its fractions on protein expression of HRH4, IL-4R&#x3b1;, JAK1, and p-JAK1 in dorsal skin tissues. The protein expression of HRH4, IL-4R&#x3b1;, JAK1, and p-JAK1 were detected by Western blotting, and quantified by densitometry <bold>(E)</bold>. Relative expressions of HRH4, IL-4R&#x3b1;, JAK1 and p-JAK1 were normalized to GAPDH internal control <bold>(A&#x2013;D)</bold>. Data were presented as the means&#x20;&#xb1; SEM, &#x23;&#x23;<italic>p</italic>&#x20;&#x3c; 0.01 vs. normal group; &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01 vs. AD model group. (a) normal group, (b) AD model group, (c) WD group, (d) CPF group, (e) 40AEF group, (f) 90AEF group, (g) WEF group, (h) PEF&#x20;group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g005.tif"/>
</fig>
</sec>
<sec id="s3-9">
<title>Untargeted Metabolomics</title>
<sec id="s3-9-1">
<title>PLS-DA Analysis</title>
<p>To identify chemical differences between high-dimensional mass spectra data measured for different groups, we used partial least squares discrimination analysis (PLS-DA) to evaluate the metabolomics datasets. In the PLS-DA analysis, for the positive ion mode, R<sup>2</sup>Y (cum) &#x3d; 0.993 and Q<sup>2</sup> (cum) &#x3d; 0.858; for the negative ion mode, R<sup>2</sup>Y (cum) &#x3d; 0.989 and Q<sup>2</sup> (cum) &#x3d; 0.846. Both <italic>R</italic>
<sup>2</sup> and Q<sup>2</sup> exceeded 0.5, indicating that the statistical model had a good fit and predictive ability. There were differences between the three major clusters: the AD model group was set aside from the normal group and the HLJDD group (<xref ref-type="fig" rid="F6">Figures 6A&#x2013;D</xref>). Therefore, the metabolite profiles were distinctively altered by treatment with HLJDD, suggesting that HLJDD can be an effective treatment for AD. This result is also consistent with the experimental data, where HLJDD showed significant therapeutic efficacy in AD models. Additionally, we observed that the metabolite profile of the control group was very different from that of the model group, suggesting that AD may have caused irreversible metabolic disorders in animals.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>PLS-DA score chart of mice serum samples in positive and negative modes. <bold>(A)</bold> PLS-DA score plots in positive mode, <bold>(B)</bold> PLS-DA score plots in negative mode, <bold>(C)</bold> permutation plots of the PLS-DA models in positive mode, <bold>(D)</bold> permutation plots of the PLS-DA models in negative&#x20;mode.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g006.tif"/>
</fig>
</sec>
<sec id="s3-9-2">
<title>Identification of Potential Biomarkers</title>
<p>Biomarkers were screened according to a threshold of variable importance in the projection (VIP) value (VIP &#x3e; 1) that was generated after PLS-DA processing. The <italic>p</italic>-value for significantly differential metabolites was set to 0.05. According to the above criteria, 40 significant biomarkers were identified and selected for further study (<xref ref-type="table" rid="T2">Table&#x20;2</xref>). Compared with normal control group, the levels of 25 metabolites (L-alloisoleucine, 2-hydroxy-2-methylbutanedioic acid, linolelaidic acid, (2S)-2-aminopentanedioic acid, L-alanine, carnosine, (Z)-tetracos-15-enoic acid, malic acid, gamma-linolenic acid, octadecanedioic acid, (5Z,8Z,11Z,14Z,16E)-18-hydroxyicosa-5,8,11,14,16-pentaenoic acid, D-phenyllactic acid, deoxyuridine, 2-(5-hydroxy-1H-indol-3-yl)acetic acid, orotic acid, prostaglandin D1, N&#x2032;-hydroxymethylnorcotinine, biliverdin, lysoPE (20:4 (8Z,11Z,14Z,17Z)/0:0), N-[(3R,4R,5S,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide, N-a-acetyl-L-arginine, L-hypoglycin A, dihydro-O-methylsterigmatocystin, 6-lactoyltetrahydropterin, and phosphocreatinine) were significantly upregulated and 15 metabolites (N-methyl-D-aspartic acid, 3,7-dimethylpurine-2,6-dione, indole-3-propionic acid, 1H-pyrimidine-2,4-dione, docosahexaenoic acid, L-glutamic acid, gamma-glutamylvaline, lysoPC(24:1 (15Z)), humulinone, 4-imidazolone-5-propionic acid, alanyl-glutamine, PC(P-18:1 (11Z)/20:5 (5Z,8Z,11Z,14Z,17Z)), cytosine, glutaminylphenylalanine, and gamma-glutamylleucine)) were significantly downregulated in the AD model group. After treatment, these metabolites were restored to varying degrees in the HLJDD&#x20;group.</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Mass databases of 40 potential differential metabolites.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">No</th>
<th align="center">R.T.(s)</th>
<th align="center">
<italic>m/z</italic>
</th>
<th align="center">Ion mode</th>
<th align="center">Identification results (MS2)</th>
<th align="center">Control group (peak area abundance)</th>
<th align="center">Model group (peak area abundance)</th>
<th align="center">HJDD (peak area abundance)</th>
<th align="center">VIP</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1</td>
<td align="char" char=".">311.56</td>
<td align="char" char=".">131.0356</td>
<td align="center">N</td>
<td align="left">L-Alloisoleucine</td>
<td align="char" char="plusmn">14.21&#x20;&#xb1; 2.31</td>
<td align="char" char="plusmn">6.43&#x20;&#xb1; 1.7<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">8.39&#x20;&#xb1; 1.29<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.19</td>
</tr>
<tr>
<td align="left">2</td>
<td align="char" char=".">353.64</td>
<td align="char" char=".">146.0824</td>
<td align="center">N</td>
<td align="left">2-hydroxy-2-methylbutanedioic acid</td>
<td align="char" char="plusmn">3.1&#x20;&#xb1; 0.92</td>
<td align="char" char="plusmn">5.67&#x20;&#xb1; 0.67<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">4.83&#x20;&#xb1; 0.56<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.19</td>
</tr>
<tr>
<td align="left">3</td>
<td align="char" char=".">45.51</td>
<td align="char" char=".">279.2325</td>
<td align="center">N</td>
<td align="left">Linolelaidic acid</td>
<td align="char" char="plusmn">384.69&#x20;&#xb1; 50.49</td>
<td align="char" char="plusmn">674.06&#x20;&#xb1; 65.02<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">512.09&#x20;&#xb1; 133.43&#x2a;&#x2a;</td>
<td align="char" char=".">1.19</td>
</tr>
<tr>
<td align="left">4</td>
<td align="char" char=".">404.55</td>
<td align="char" char=".">146.0460</td>
<td align="center">N</td>
<td align="left">(2S)-2-aminopentanedioic acid</td>
<td align="char" char="plusmn">42.57&#x20;&#xb1; 4.46</td>
<td align="char" char="plusmn">50.39&#x20;&#xb1; 9.34<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">41.51&#x20;&#xb1; 6.68&#x2a;&#x2a;</td>
<td align="char" char=".">1.24</td>
</tr>
<tr>
<td align="left">5</td>
<td align="char" char=".">349.66</td>
<td align="char" char=".">88.0420</td>
<td align="center">N</td>
<td align="left">L-Alanine</td>
<td align="char" char="plusmn">21.34&#x20;&#xb1; 3.27</td>
<td align="char" char="plusmn">28.47&#x20;&#xb1; 5.13<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">22.66&#x20;&#xb1; 5.56<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.30</td>
</tr>
<tr>
<td align="left">6</td>
<td align="char" char=".">384.33</td>
<td align="char" char=".">226.0482</td>
<td align="center">N</td>
<td align="left">Carnosine</td>
<td align="char" char="plusmn">0.95&#x20;&#xb1; 0.16</td>
<td align="char" char="plusmn">1.82&#x20;&#xb1; 0.1<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">1.14&#x20;&#xb1; 0.32&#x2a;&#x2a;</td>
<td align="char" char=".">1.32</td>
</tr>
<tr>
<td align="left">7</td>
<td align="char" char=".">313.56</td>
<td align="char" char=".">146.0461</td>
<td align="center">N</td>
<td align="left">N-Methyl-D-aspartic acid</td>
<td align="char" char="plusmn">22.14&#x20;&#xb1; 3.37</td>
<td align="char" char="plusmn">13.39&#x20;&#xb1; 1.49<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">18.32&#x20;&#xb1; 4.08&#x2a;&#x2a;</td>
<td align="char" char=".">1.04</td>
</tr>
<tr>
<td align="left">8</td>
<td align="char" char=".">272.39</td>
<td align="char" char=".">179.0558</td>
<td align="center">N</td>
<td align="left">3,7-dimethylpurine-2,6-dione</td>
<td align="char" char="plusmn">39.29&#x20;&#xb1; 9.98</td>
<td align="char" char="plusmn">15.91&#x20;&#xb1; 4.57<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">22.15&#x20;&#xb1; 6.17<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.14</td>
</tr>
<tr>
<td align="left">9</td>
<td align="char" char=".">26.91</td>
<td align="char" char=".">365.0324</td>
<td align="center">N</td>
<td align="left">(Z)-tetracos-15-enoic acid</td>
<td align="char" char="plusmn">7.56&#x20;&#xb1; 4.22</td>
<td align="char" char="plusmn">13.47&#x20;&#xb1; 2.94<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">6.51&#x20;&#xb1; 1.58&#x2a;&#x2a;</td>
<td align="char" char=".">1.15</td>
</tr>
<tr>
<td align="left">10</td>
<td align="char" char=".">423.32</td>
<td align="char" char=".">132.0308</td>
<td align="center">N</td>
<td align="left">Malic acid</td>
<td align="char" char="plusmn">1.62&#x20;&#xb1; 0.68</td>
<td align="char" char="plusmn">6.15&#x20;&#xb1; 2.29<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">2.98&#x20;&#xb1; 1.04&#x2a;&#x2a;</td>
<td align="char" char=".">1.27</td>
</tr>
<tr>
<td align="left">11</td>
<td align="char" char=".">95.55</td>
<td align="char" char=".">187.1338</td>
<td align="center">N</td>
<td align="left">Indole-3-propionic acid</td>
<td align="char" char="plusmn">6.53&#x20;&#xb1; 2.11</td>
<td align="char" char="plusmn">3.67&#x20;&#xb1; 2.9<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">7.32&#x20;&#xb1; 3.14&#x2a;&#x2a;</td>
<td align="char" char=".">1.06</td>
</tr>
<tr>
<td align="left">12</td>
<td align="char" char=".">324.89</td>
<td align="char" char=".">110.0991</td>
<td align="center">N</td>
<td align="left">1H-pyrimidine-2,4-dione</td>
<td align="char" char="plusmn">0.44&#x20;&#xb1; 0.07</td>
<td align="char" char="plusmn">0.16&#x20;&#xb1; 0.08<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">0.32&#x20;&#xb1; 0.15&#x2a;&#x2a;</td>
<td align="char" char=".">1.34</td>
</tr>
<tr>
<td align="left">13</td>
<td align="char" char=".">45.69</td>
<td align="char" char=".">278.2204</td>
<td align="center">N</td>
<td align="left">&#x3b3;-Linolenic acid</td>
<td align="char" char="plusmn">11.87&#x20;&#xb1; 2.45</td>
<td align="char" char="plusmn">23.29&#x20;&#xb1; 3.3<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">17.32&#x20;&#xb1; 6.13&#x2a;&#x2a;</td>
<td align="char" char=".">1.13</td>
</tr>
<tr>
<td align="left">14</td>
<td align="char" char=".">98.97</td>
<td align="char" char=".">327.1076</td>
<td align="center">N</td>
<td align="left">Docosahexaenoic acid</td>
<td align="char" char="plusmn">6.52&#x20;&#xb1; 2.9</td>
<td align="char" char="plusmn">3.91&#x20;&#xb1; 1.13<sup>&#x23;</sup>
</td>
<td align="char" char="plusmn">10.94&#x20;&#xb1; 4.37&#x2a;&#x2a;</td>
<td align="char" char=".">1.38</td>
</tr>
<tr>
<td align="left">15</td>
<td align="char" char=".">384.81</td>
<td align="char" char=".">131.0547</td>
<td align="center">N</td>
<td align="left">L-Glutamic acid</td>
<td align="char" char="plusmn">3.84&#x20;&#xb1; 0.63</td>
<td align="char" char="plusmn">1.53&#x20;&#xb1; 0.6<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">2.32&#x20;&#xb1; 0.3&#x2a;&#x2a;</td>
<td align="char" char=".">1.23</td>
</tr>
<tr>
<td align="left">16</td>
<td align="char" char=".">77.65</td>
<td align="char" char=".">313.2376</td>
<td align="center">N</td>
<td align="left">octadecanedioic acid</td>
<td align="char" char="plusmn">5.46&#x20;&#xb1; 1.24</td>
<td align="char" char="plusmn">9.35&#x20;&#xb1; 4.51<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">4.71&#x20;&#xb1; 1.19&#x2a;&#x2a;</td>
<td align="char" char=".">1.17</td>
</tr>
<tr>
<td align="left">17</td>
<td align="char" char=".">39.25</td>
<td align="char" char=".">317.1903</td>
<td align="center">N</td>
<td align="left">(5Z,8Z,11Z,14Z,16E)-18-hydroxyicosa-5,8,11,14,16-pentaenoic acid</td>
<td align="char" char="plusmn">0.24&#x20;&#xb1; 0.14</td>
<td align="char" char="plusmn">1.31&#x20;&#xb1; 0.53<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">0.76&#x20;&#xb1; 0.27&#x2a;&#x2a;</td>
<td align="char" char=".">1.28</td>
</tr>
<tr>
<td align="left">18</td>
<td align="char" char=".">109.13</td>
<td align="char" char=".">165.0145</td>
<td align="center">N</td>
<td align="left">D-Phenyllactic acid</td>
<td align="char" char="plusmn">3.62&#x20;&#xb1; 1.47</td>
<td align="char" char="plusmn">9.1&#x20;&#xb1; 3.46<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">5.23&#x20;&#xb1; 3.09&#x2a;&#x2a;</td>
<td align="char" char=".">1.17</td>
</tr>
<tr>
<td align="left">19</td>
<td align="char" char=".">151.45</td>
<td align="char" char=".">226.1446</td>
<td align="center">N</td>
<td align="left">Deoxyuridine</td>
<td align="char" char="plusmn">1.84&#x20;&#xb1; 0.36</td>
<td align="char" char="plusmn">5.41&#x20;&#xb1; 0.99<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">3.61&#x20;&#xb1; 1.61&#x2a;&#x2a;</td>
<td align="char" char=".">1.22</td>
</tr>
<tr>
<td align="left">20</td>
<td align="char" char=".">186.79</td>
<td align="char" char=".">189.0665</td>
<td align="center">N</td>
<td align="left">2-(5-hydroxy-1H-indol-3-yl)acetic acid</td>
<td align="char" char="plusmn">0.38&#x20;&#xb1; 0.11</td>
<td align="char" char="plusmn">2.69&#x20;&#xb1; 0.97<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">1.8&#x20;&#xb1; 0.72&#x2a;&#x2a;</td>
<td align="char" char=".">1.13</td>
</tr>
<tr>
<td align="left">21</td>
<td align="char" char=".">244.55</td>
<td align="char" char=".">155.0102</td>
<td align="center">N</td>
<td align="left">Orotic acid</td>
<td align="char" char="plusmn">2.55&#x20;&#xb1; 0.71</td>
<td align="char" char="plusmn">7.55&#x20;&#xb1; 3.37<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">5.49&#x20;&#xb1; 1.99&#x2a;</td>
<td align="char" char=".">1.39</td>
</tr>
<tr>
<td align="left">22</td>
<td align="char" char=".">115.78</td>
<td align="char" char=".">353.2324</td>
<td align="center">N</td>
<td align="left">Prostaglandin D1</td>
<td align="char" char="plusmn">3.53&#x20;&#xb1; 1.82</td>
<td align="char" char="plusmn">19.11&#x20;&#xb1; 3.56<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">15.88&#x20;&#xb1; 1.96&#x2a;</td>
<td align="char" char=".">1.26</td>
</tr>
<tr>
<td align="left">23</td>
<td align="char" char=".">405.92</td>
<td align="char" char=".">246.1332</td>
<td align="center">P</td>
<td align="left">gamma-Glutamylvaline</td>
<td align="char" char="plusmn">3.93&#x20;&#xb1; 0.99</td>
<td align="char" char="plusmn">2.01&#x20;&#xb1; 0.54<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">2.89&#x20;&#xb1; 0.46&#x2a;&#x2a;</td>
<td align="char" char=".">1.23</td>
</tr>
<tr>
<td align="left">24</td>
<td align="char" char=".">189.75</td>
<td align="char" char=".">606.4496</td>
<td align="center">P</td>
<td align="left">LysoPC(24:1 (15Z))</td>
<td align="char" char="plusmn">9.97&#x20;&#xb1; 0.72</td>
<td align="char" char="plusmn">7.93&#x20;&#xb1; 1.49<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">9.34&#x20;&#xb1; 1.06<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.32</td>
</tr>
<tr>
<td align="left">25</td>
<td align="char" char=".">294.90</td>
<td align="char" char=".">192.9058</td>
<td align="center">P</td>
<td align="left">N&#x2032;-Hydroxymethylnorcotinine</td>
<td align="char" char="plusmn">2.35&#x20;&#xb1; 0.25</td>
<td align="char" char="plusmn">3.28&#x20;&#xb1; 0.65<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">2.64&#x20;&#xb1; 0.2<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.05</td>
</tr>
<tr>
<td align="left">26</td>
<td align="char" char=".">204.67</td>
<td align="char" char=".">582.3182</td>
<td align="center">P</td>
<td align="left">Biliverdin</td>
<td align="char" char="plusmn">1.64&#x20;&#xb1; 0.33</td>
<td align="char" char="plusmn">2.72&#x20;&#xb1; 0.36<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">1.68&#x20;&#xb1; 0.37&#x2a;&#x2a;</td>
<td align="char" char=".">1.24</td>
</tr>
<tr>
<td align="left">27</td>
<td align="char" char=".">403.25</td>
<td align="char" char=".">287.1212</td>
<td align="center">P</td>
<td align="left">Humulinone</td>
<td align="char" char="plusmn">4.59&#x20;&#xb1; 0.63</td>
<td align="char" char="plusmn">2.58&#x20;&#xb1; 0.63<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">4.15&#x20;&#xb1; 0.96&#x2a;&#x2a;</td>
<td align="char" char=".">1.37</td>
</tr>
<tr>
<td align="left">28</td>
<td align="char" char=".">373.29</td>
<td align="char" char=".">157.0599</td>
<td align="center">P</td>
<td align="left">4-Imidazolone-5-propionic acid</td>
<td align="char" char="plusmn">17.26&#x20;&#xb1; 2.67</td>
<td align="char" char="plusmn">9.13&#x20;&#xb1; 2.32<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">15&#x20;&#xb1; 2.76&#x2a;&#x2a;</td>
<td align="char" char=".">1.36</td>
</tr>
<tr>
<td align="left">29</td>
<td align="char" char=".">203.46</td>
<td align="char" char=".">502.2923</td>
<td align="center">P</td>
<td align="left">LysoPE (20:4 (8Z,11Z,14Z,17Z)/0:0)</td>
<td align="char" char="plusmn">42.07&#x20;&#xb1; 12.12</td>
<td align="char" char="plusmn">174.45&#x20;&#xb1; 19.51<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">148.54&#x20;&#xb1; 21&#x2a;&#x2a;</td>
<td align="char" char=".">1.34</td>
</tr>
<tr>
<td align="left">30</td>
<td align="char" char=".">282.69</td>
<td align="char" char=".">221.1206</td>
<td align="center">P</td>
<td align="left">N-[(3R,4R,5S,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide</td>
<td align="char" char="plusmn">0.8&#x20;&#xb1; 0.13</td>
<td align="char" char="plusmn">1.2&#x20;&#xb1; 0.31<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">0.97&#x20;&#xb1; 0.21<sup>&#x2a;</sup>
</td>
<td align="char" char=".">1.05</td>
</tr>
<tr>
<td align="left">31</td>
<td align="char" char=".">321.38</td>
<td align="char" char=".">218.0418</td>
<td align="center">P</td>
<td align="left">Alanyl-Glutamine</td>
<td align="char" char="plusmn">1.66&#x20;&#xb1; 0.28</td>
<td align="char" char="plusmn">1.22&#x20;&#xb1; 0.17<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">1.74&#x20;&#xb1; 0.28&#x2a;&#x2a;</td>
<td align="char" char=".">1.35</td>
</tr>
<tr>
<td align="left">32</td>
<td align="char" char=".">93.14</td>
<td align="char" char=".">790.5752</td>
<td align="center">P</td>
<td align="left">PC(P-18:1 (11Z)/20:5 (5Z,8Z,11Z,14Z,17Z))</td>
<td align="char" char="plusmn">5.53&#x20;&#xb1; 1.7</td>
<td align="char" char="plusmn">3.54&#x20;&#xb1; 0.78<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">6.48&#x20;&#xb1; 1.92&#x2a;&#x2a;</td>
<td align="char" char=".">1.29</td>
</tr>
<tr>
<td align="left">33</td>
<td align="char" char=".">216.41</td>
<td align="char" char=".">112.0505</td>
<td align="center">P</td>
<td align="left">Cytosine</td>
<td align="char" char="plusmn">7.16&#x20;&#xb1; 0.74</td>
<td align="char" char="plusmn">4.83&#x20;&#xb1; 1.47<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">7.02&#x20;&#xb1; 0.34&#x2a;&#x2a;</td>
<td align="char" char=".">1.49</td>
</tr>
<tr>
<td align="left">34</td>
<td align="char" char=".">394.61</td>
<td align="char" char=".">217.0658</td>
<td align="center">P</td>
<td align="left">N-a-Acetyl-L-arginine</td>
<td align="char" char="plusmn">0.11&#x20;&#xb1; 0.06</td>
<td align="char" char="plusmn">0.19&#x20;&#xb1; 0.02<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">0.12&#x20;&#xb1; 0.03&#x2a;&#x2a;</td>
<td align="char" char=".">1.29</td>
</tr>
<tr>
<td align="left">35</td>
<td align="char" char=".">434.06</td>
<td align="char" char=".">294.1542</td>
<td align="center">P</td>
<td align="left">Glutaminylphenylalanine</td>
<td align="char" char="plusmn">6.9&#x20;&#xb1; 1.3</td>
<td align="char" char="plusmn">4.89&#x20;&#xb1; 1.58<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">6.57&#x20;&#xb1; 1.57&#x2a;</td>
<td align="char" char=".">1.08</td>
</tr>
<tr>
<td align="left">36</td>
<td align="char" char=".">417.04</td>
<td align="char" char=".">261.1436</td>
<td align="center">P</td>
<td align="left">gamma-Glutamylleucine</td>
<td align="char" char="plusmn">9.44&#x20;&#xb1; 2.92</td>
<td align="char" char="plusmn">6.57&#x20;&#xb1; 1.56<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">8.71&#x20;&#xb1; 2.98&#x2a;</td>
<td align="char" char=".">1.15</td>
</tr>
<tr>
<td align="left">37</td>
<td align="char" char=".">407.92</td>
<td align="char" char=".">142.0859</td>
<td align="center">P</td>
<td align="left">L-Hypoglycin A</td>
<td align="char" char="plusmn">1.99&#x20;&#xb1; 0.26</td>
<td align="char" char="plusmn">4.81&#x20;&#xb1; 1.74<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">3.48&#x20;&#xb1; 0.49&#x2a;</td>
<td align="char" char=".">1.02</td>
</tr>
<tr>
<td align="left">38</td>
<td align="char" char=".">309.92</td>
<td align="char" char=".">341.8941</td>
<td align="center">P</td>
<td align="left">Dihydro-O-methylsterigmatocystin</td>
<td align="char" char="plusmn">0.56&#x20;&#xb1; 0.21</td>
<td align="char" char="plusmn">1.01&#x20;&#xb1; 0.25<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">0.72&#x20;&#xb1; 0.2&#x2a;&#x2a;</td>
<td align="char" char=".">1.47</td>
</tr>
<tr>
<td align="left">39</td>
<td align="char" char=".">496.99</td>
<td align="char" char=".">240.1098</td>
<td align="center">P</td>
<td align="left">6-Lactoyltetrahydropterin</td>
<td align="char" char="plusmn">0.65&#x20;&#xb1; 0.1</td>
<td align="char" char="plusmn">1.49&#x20;&#xb1; 0.53<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">1.07&#x20;&#xb1; 0.53&#x2a;</td>
<td align="char" char=".">1.11</td>
</tr>
<tr>
<td align="left">40</td>
<td align="char" char=".">213.38</td>
<td align="char" char=".">194.0358</td>
<td align="center">P</td>
<td align="left">Phosphocreatinine</td>
<td align="char" char="plusmn">0.35&#x20;&#xb1; 0.15</td>
<td align="char" char="plusmn">0.94&#x20;&#xb1; 0.19<sup>&#x23;&#x23;</sup>
</td>
<td align="char" char="plusmn">0.62&#x20;&#xb1; 0.23&#x2a;</td>
<td align="char" char=".">1.17</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Compared to control group, <sup>&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.05, <sup>&#x23;&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.01; Compared to model group, &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01; N: negative mode, P: positive&#x20;mode.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>Additionally, clustering heatmaps were used to show an intuitive visualization of the difference and clustering degree of metabolites among the three groups. Heatmaps of 40 metabolites were constructed and visualized using MetaboAnalyst software. As shown in <xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, the metabolites in the AD model group, normal control group, and HLJDD group achieved distinct clusters.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Hierarchical clustering results of 40 metabolites in ESI&#x2b; <bold>(A)</bold> and ESI&#x2212; <bold>(B)</bold> mode. Note: The standard concentration was the abscissa, with the metabolites name regarded as the ordinate. Each of lattice represents a concentration in corresponding sample. The color ranges from blue to red and the shades of color represent different concentration magnitudes. <sup>&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.05, <sup>&#x23;&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs.</italic> normal group; &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs</italic>. AD model&#x20;group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g007.tif"/>
</fig>
</sec>
<sec id="s3-9-3">
<title>Metabolic Pathway Analysis</title>
<p>Metabolic pathway analysis was performed with MetPA using the identified biomarkers as input, which revealed 21 metabolic pathways that may be involved in the dysregulation of metabolism in AD (<xref ref-type="fig" rid="F8">Figure&#x20;8</xref>). Pathways with impact values over 0.1 were considered as candidate target pathways. Among them, four pathways, namely, histidine metabolism, arginine biosynthesis, pyrimidine metabolism, and alanine, aspartic acid, and glutamate metabolism, have been suggested to be subject to perturbation by HLJDD to improve the endogenous metabolism of&#x20;AD.</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>Pathway analysis of 40 potential biomarkers with MetPA. 1. Nitrogen metabolism, 2. Biosynthesis of unsaturated fatty acids, 3. Caffeine metabolism, 4. Aminoacyl-tRNA biosynthesis, 5. Butanoate metabolism, 6. Pantothenate and CoA biosynthesis, 7. Selenocompound metabolism, 8. Folate biosynthesis, 9. Glyoxylate and dicarboxylate metabolism, 10. Glutathione metabolism, 11. Glycerophospholipid metabolism, 12. Tryptophan metabolism, 13. Amino sugar and nucleotide sugar metabolism, 14. beta-Alanine metabolism, 15. Porphyrin and chlorophyll metabolism, 16. Arginine and proline metabolism, 17. Arginine biosynthesis, 18. Histidine metabolism, 19. Pyrimidine metabolism, 20. Alanine, aspartate and glutamate metabolism, 21. D-Glutamine and D-glutamate metabolism.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g008.tif"/>
</fig>
</sec>
</sec>
<sec id="s3-10">
<title>Targeted Metabolomics</title>
<sec id="s3-10-1">
<title>Selection of Metabolites for Targeted Metabolomics and Construction of a Standard Curves</title>
<p>For the screening diagnostic biomarkers, pearson&#x2019;s correlation analysis was used for the correlation analysis of 17 physiological and biochemical indices (skin lesion score, IL-13, IL-17, IL-3, IL-31, IL-33, IL-4, IL-5, TSLP, histamine, HRH4 mRNA, IL-4R&#x3b1; mRNA, JAK1 mRNA, IgE, IL-4R&#x3b1;, JAK1, p-JAK1, and HRH4) and 40 potential biomarkers. First, in the normal control group and AD model group, a total of 190 metabolites were significantly associated with physiological and biochemical indices (<xref ref-type="sec" rid="s12">Supplementary Figure S11</xref>), which could act as diagnostic biomarkers for AD. Second, in the AD model group and HLJDD group, a total of 190 metabolites were significantly associated with macroscopic indexes (<xref ref-type="sec" rid="s12">Supplementary Figure S12</xref>), which could act as a potential biomarker for AD treated with HLJDD. To increase the diagnostic capability of the potential biomarkers, we took the intersection of the two sets of predictions. Finally, 23 metabolites (prostaglandin D1, phosphocreatinine, n-methyl-d-aspartic acid, n-hydroxymethylnorcotinine, malic acid, lysopc (24:1 (15z)), linolelaidic acid, l-alloisoleucine, l-alanine, humulinone, glutaric acid, gamma-linolenic acid, dihydro-o-methylsterigmatocystin, deoxyuridine, d-phenyllactic acid, carnosine, biliverdin, alanyl-glutamine, 4-imidazolone-5-propionic acid, 3,7-dimethylpurine-2,6-dione, 2-hydroxy-2-methylbutanedioic acid, 1h-pyrimidine-2,4-dione, and (z)-tetracos-15-enoic acid) were selected as diagnostic biomarkers of AD. Considering the accuracy of metabolites and the diversity detected in each sample, 14 endogenous metabolites (DL-malic acid, glutaric acid, N-methyl-D-aspartic acid, linolelaidic acid, gamma-linolenic acid, L-alloisoleucine, L-carnosine, phosphocreatinine, L-alanine, 2&#x2032;-deoxyuridine, prostaglandin D1, 1H-pyrimidine-2,4-dione, L-alanyl-L-glutamine, and biliverdine) were selected for targeted metabolomics analysis. As shown in <xref ref-type="fig" rid="F9">Figure&#x20;9</xref>, a standard curve of 14 endogenous metabolites was established. The curve fit all values of <italic>R</italic>
<sup>
<italic>2</italic>
</sup> &#x3e; 0.9, indicating that the concentration calculation based on these curves was accurate.</p>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>Standard curves of 14 different metabolites of DL-Malic acid, Glutaric acid, N-Methyl-D-aspartic acid, linolelaidic acid, &#x3b3;-Linolenic acid, L-Alloisoleucine, L-Carnosine, phosphocreatinine, L-Alanine, 2&#x2032;-Deoxyuridine, Prostaglandin D1, 1H-pyrimidine-2,4-dione, L-Alanyl-L-Glutamine, and Biliverdine.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g009.tif"/>
</fig>
</sec>
<sec id="s3-10-2">
<title>Assessment of 14 Metabolites in HLJDD and its Fractions by Targeted Metabolomics</title>
<p>As shown in <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>, compared with the normal control group, L-alloisoleucine, L-alanyl-L-glutamine, glutaric acid, 1H-pyrimidine-2,4-dione, and N-methyl-D-aspartic acid were significantly downregulated, and glutaric acid, N-methyl-D-aspartic acid, linolelaidic acid, gamma-linolenic acid, L-carnosine, phosphocreatinine, L-alanine, 2&#x2032;-deoxyuridine, prostaglandin D1, L-alanyl-L-glutamine, biliverdine, and DL-malic acid were significantly upregulated in the AD model group. After treatment, these metabolites were restored to varying degrees in the HLJDD group, which was also consistent with the findings of the untargeted metabolomics analysis. Meanwhile, we found that these metabolites were also restored to varying degrees in the CPF, 40AEF, 90AEF, WEF, and PEF groups, indicating that CPF, 40AEF, 90AEF, WEF, and PEF exhibited different degrees of therapeutic activity against AD, especially HLJDD, 40AEF, and CPF. Hierarchical clustering analysis was performed using MetaboAnalyst software, the results of which revealed that there were two clusters (AD model group, WEF, PEF; normal control group, HLJDD, CPF, 40AEF, 90AEF), which further validated the therapeutic effects of HLJDD and its fractions, especially HLJDD, 40AEF, and CPF. Therefore, 40AEF and CPF are considered the most important components of HLJDD for ameliorating&#x20;AD.</p>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption>
<p>Hierarchical clustering results of 14 metabolites in target metabolomics. Note: The standard concentration was the abscissa, with the metabolites name regarded as the ordinate. Each of lattice represents a concentration in corresponding sample. The color ranges from blue to red and the shades of color represent different concentration magnitudes. <sup>&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.05, <sup>&#x23;&#x23;</sup>
<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs.</italic> normal group; &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01&#x20;<italic>vs</italic>. AD model&#x20;group.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g010.tif"/>
</fig>
</sec>
<sec id="s3-10-3">
<title>Evaluation of Diagnostic Efficacy of Potential Biomarkers</title>
<p>ROC curves were used to assess the sensitivity and specificity of the diagnostic performance of potential biomarkers (<xref ref-type="bibr" rid="B19">Hao et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B29">Li, et&#x20;al., 2014a</xref>). Diagnostic accuracy was analyzed by area under curve (AUC) of ROC, and AUC was considered to be of good accuracy when AUC &#x3e; 0.7 (<xref ref-type="bibr" rid="B1">Abdel-Gawad et&#x20;al., 2009</xref>). Classical univariate ROC curve analyses and multivariate ROC curve based exploratory analysis (Explorer) were performed using MetaboAnalyst 5.0 (<ext-link ext-link-type="uri" xlink:href="https://www.metaboanalyst.ca/">https://www.metaboanalyst.ca/</ext-link>). The results of classical univariate ROC curve analyses indicated that the AUC of 14 metabolites was greater than 0.7 (<xref ref-type="fig" rid="F11">Figures 11A&#x2013;N</xref>). The results of the multivariate ROC curve based exploratory analysis indicated that the AUC was greater than 0.9 (<xref ref-type="fig" rid="F11">Figure&#x20;11O</xref>). Therefore, these metabolites may be potential candidate biomarkers for predicting&#x20;AD.</p>
<fig id="F11" position="float">
<label>FIGURE 11</label>
<caption>
<p>Classical univariate and multivariate ROC curve analyses. <bold>(A)</bold>, 1H-pyrimidine-2,4-dione (AUC &#x3d; 1); <bold>(B)</bold>, biliverdine (AUC &#x3d; 0.828); <bold>(C)</bold>, carnosine (AUC&#x20;&#x3d; 0.844); <bold>(D)</bold>, deoxyuridine (AUC &#x3d; 0.953); <bold>(E)</bold>, DL-malic acid (AUC &#x3d; 0.953); <bold>(F)</bold>, gamma-linolenic acid (AUC &#x3d; 1); <bold>(G)</bold>, glutaric acid (AUC &#x3d; 0.906); <bold>(H)</bold>, L-alanine (AUC &#x3d; 0.875); <bold>(I)</bold>, L-alanyl-L-glutamine (AUC &#x3d; 0.906); <bold>(J)</bold>, L-alloisoleucine (AUC &#x3d; 1); <bold>(K)</bold>, linolelaidic acid (AUC, 0.922); <bold>(L)</bold>, N-methyl-D-aspartic acid (AUC, 1); <bold>(M)</bold>, Phosphocreatine (AUC &#x3d; 0.891); <bold>(N)</bold>, prostaglandin D1 (AUC &#x3d; 0.781); <bold>(O)</bold>, multivariate ROC curve analyses.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g011.tif"/>
</fig>
</sec>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>HLJDD is a traditional Chinese medicine composed of four herbs, <italic>Coptis chinensis</italic> Franch., <italic>Scutellaria baicalensis</italic> Georgi, <italic>Phellodendron amurense</italic> Rupr., and <italic>Gardenia jasminoides</italic> J.&#x20;Ellis. It is frequently prescribed due to its effectiveness against serious illness, including those of the skin (<xref ref-type="bibr" rid="B6">Chen et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B9">Chen et&#x20;al., 2016</xref>). With these properties, HLJDD has a curative effect in the treatment of AD (<xref ref-type="bibr" rid="B39">Qi et&#x20;al., 2019</xref>). Clinical and experimental studies have confirmed that HLJDD is an effective drug for the treatment of AD. However, the effective ingredients and underlying molecular mechanisms have not yet been fully explored (<xref ref-type="bibr" rid="B24">Kobayashi et&#x20;al., 2004</xref>). Previous studies have shown that the major constituents of HLJDD include alkaloids, flavonoids, iridoids, organic acids, and amino acids (<xref ref-type="bibr" rid="B51">Wang et&#x20;al., 2020</xref>). Therefore, further research is needed to elucidate the possible active ingredients responsible for the anti-AD action of HLJDD.</p>
<p>Traditional Chinese medicine always exhibits &#x201c;multi-component&#x201d; and &#x201c;multi-target&#x201d; characteristics in the treatment of diseases, which is a big challenge to clarify the pharmacodynamic components of Chinese drugs. In general, decoctions or alcoholic extracts of Chinese drugs were split into multiple fractions, which were used to clarify its substance basis (<xref ref-type="bibr" rid="B29">Li et&#x20;al., 2014a</xref>). Based on previous laboratory research (<xref ref-type="bibr" rid="B7">Chen et&#x20;al., 2021</xref>; <xref ref-type="bibr" rid="B18">Han et&#x20;al., 2020</xref>), we developed a reliable method for the rapid screening of chemical constituents and the evaluation of non-similarity degrees of splitting fractions of HLJDD using HPLC and UPLC-Q-TOF/MS/MS techniques. In this study, HLJDD was split into five fractions, and a total of 72 chemical constituents were analyzed and identified, where the different fractions showed significant chemical differences (&#x3e;81%). The main components of 40AEF, 90AEF, PEF, and WEF were alkaloids, flavonoids, and a few alkaloids, iridoids, organic acids, and amino acids, respectively, which provides insights into understanding the complex compounds of HLJDD and further analyzing the pharmacological studies of different fractions.</p>
<p>Furthermore, a DNFB-induced AD mouse model was used to explore the therapeutic effects of HLJDD and its fractions on AD. Owing to its simplicity and ease of use, high repeatability, and easy quantization of clinical scores, the model has been widely used for anti-AD drug discovery and development (<xref ref-type="bibr" rid="B46">Shiohara et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B58">Xiong et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B67">Zeng et&#x20;al., 2021</xref>). Our results showed that typical allergic responses, including itching, increased ear and epidermal thickness, swelling, dryness, and erythema were observed in the AD model, which was consistent with a previous study (<xref ref-type="bibr" rid="B58">Xiong et&#x20;al., 2020</xref>). However, the above symptoms in the dorsal skin of mice in the HLJDD group and the groups treated with its fractions were remarkably improved. The results indicated that HLJDD and its fractions had therapeutic effects on AD, especially 40AEF and CPF. Furthermore, combined with the results of physiological and biochemical indices and metabolomics, the amelioration mechanism of HLJDD in AD was proposed, as shown in <xref ref-type="fig" rid="F12">Figure&#x20;12</xref>.</p>
<fig id="F12" position="float">
<label>FIGURE 12</label>
<caption>
<p>The amelioration mechanism of HLJDD and its fractions in AD. Compared with normal control group, &#x201c;&#x2191;&#x201d; represents upward trend in normal group, &#x201c;&#x2193;&#x201d; represents downward trend in normal group. Compared with AD model group, &#x201c;(&#x2191;)&#x201d; represents upward trend in HLJDD group and its fractions groups, &#x201c;(&#x2193;)&#x201d; represents downward trend in HLJDD group and its fractions groups.</p>
</caption>
<graphic xlink:href="fphar-12-770524-g012.tif"/>
</fig>
<p>Pruritus is a major clinical feature of AD, and AD is considered a prototype of chronic pruritic dermatosis (<xref ref-type="bibr" rid="B48">St&#xe4;nder and Steinhoff, 2010</xref>). The pathogenesis of AD mainly occurs as a result of immune system disorders and epidermal barrier dysfunction, which may be related to genetic, immune, and environmental changes (<xref ref-type="bibr" rid="B48">St&#xe4;nder and Steinhoff, 2010</xref>). Skin barrier damage and immunological dysfunction are key pathogenic components of AD. Th2 cells secrete cytokines, such as IL-4, IL-5, and IL-13, which are important for AD development, especially in the acute phase of AD. Skin barrier damage induces the release of large amounts of keratinocyte-derived proinflammatory cytokines, such as IL-33 and TSLP, from keratinocytes. It also activates the inflammatory cascade, mainly involving Th2 cytokines, such as IL-4, IL-13, and IL-5 (<xref ref-type="bibr" rid="B56">Weidinger et&#x20;al., 2018</xref>). The results of our study indicated that the levels of IL-33, TSLP, IL-4, IL-13, and IL-5 were significantly upregulated in the AD model group, and that HLJDD and its fractions could reverse these effects. Histamine is the first and most well-known pruritogen (<xref ref-type="bibr" rid="B47">Simons and Simons, 2011</xref>). Itching sensation can be transmitted by the histamine pathway. In our study, the levels of histamine and IL-31 were significantly upregulated in the AD model group, and higher levels of IL-4R&#x3b1;, JAK1, and HRH4 expression were detected in the AD model group by PCR and WB analysis. HLJDD and its fractions could also reverse these effects. Previous studies have indicated that IL-31, IL-4R&#x3b1;, JAK1, and HRH4 are strongly associated with pruritus in AD (<xref ref-type="bibr" rid="B34">Oetjen et&#x20;al., 2017</xref>). Therefore, HLJDD exhibited anti-AD effects by regulating IL-4R&#x3b1;, JAK1, HRH4, histamine, and relative cytokines (IL-33, TSLP, IL-4, IL-13, and IL-5). 40AEF and CPF had much greater therapeutic action, which was considered the most important component of HLJDD for ameliorating&#x20;AD.</p>
<p>Diseases often impair the normal metabolism of the body, and disordered metabolic conditions can be effectively measured by metabolomics studies, aiding in the diagnosis and treatment of diseases (<xref ref-type="bibr" rid="B65">Yu et&#x20;al., 2021</xref>). Therefore, in the current study, we propose to use the untargeted and targeted metabolomics method to systematically explore the therapeutic mechanism of HLJDD and its fractions in the treatment of AD, which will allow us to specifically understand how the signaling has been altered during the treatment, and how changes in signaling can attenuate metabolic disorders in the body. Forty significant biomarkers were identified and selected using untargeted metabolomics. Metabolic pathway analysis indicated that these differential metabolites may be involved in histidine metabolism, arginine biosynthesis, pyrimidine metabolism, and alanine, aspartic acid, and glutamate metabolism, have been suggested to be subject to perturbation by HLJDD to improve the endogenous metabolism of AD. Further, for screening diagnostic biomarkers, Pearson&#x2019;s correlation analysis was used for the correlation analysis of 17 physiological and biochemical indices and 40 potential biomarker data. Fourteen endogenous metabolites (DL-malic acid, glutaric acid, N-methyl-D-aspartic acid, linolelaidic acid, gamma-linolenic acid, L-alloisoleucine, L-carnosine, phosphocreatinine, L-alanine, 2&#x2032;-deoxyuridine, prostaglandin D1, 1H-pyrimidine-2,4-dione, L-alanyl-L-glutamine, and biliverdine) were selected for targeted metabolomic analysis. The results of targeted metabolomics analysis indicated that these metabolites were restored to varying degrees in the HLJDD group, which was also consistent with the findings of untargeted metabolomics analysis. Meanwhile, we found that these metabolites were also restored to varying degrees in the CPF, 40AEF, 90AEF, WEF, and PEF groups, especially HLJDD, 40AEF, and CPF. Interestingly, 40AEF and CPF had much greater therapeutic action, which further validated that 40AEF and CPF were the most important components of HLJDD for ameliorating AD. In addition, the results of univariate and multivariate ROC curve-based exploratory analysis indicated that these metabolites may be potential candidate biomarkers for predicting&#x20;AD.</p>
<p>Among these differential metabolites, fatty acids, including gamma-linolenic acid and linolelaidic acid, were increased in the AD model group. Fatty acids have been considered to play a critical role in inflammatory responses because they are a source of various lipid mediators (<xref ref-type="bibr" rid="B42">Sala-Vila et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B44">Schafer and Kragballe, 1991</xref>; <xref ref-type="bibr" rid="B50">Trak-Fellermeier et&#x20;al., 2004</xref>). Gamma-linolenic acid has been reported to reduce skin water loss and promote skin epidermal cell proliferation. In patients with dry skin and moderate AD, long-term diet treatment with high gamma-linolenic acid has been found to gradually restore skin barrier function, reduce water loss in the skin, and decrease inflammatory factor expression in AD patients (<xref ref-type="bibr" rid="B22">Kawamura et&#x20;al., 2011</xref>). Previous studies have revealed that prostaglandin D1 upregulation is involved in the prevention of AD by suppressing both mast cell and keratinocyte activation, which is one mechanism by which dihomo-g-linolenic acid prevents the development of atopic dermatitis (<xref ref-type="bibr" rid="B2">Amagai et&#x20;al., 2015</xref>). Interestingly, higher levels of gamma-linolenic acid, linolelaidic acid, and prostaglandin D1 in the AD model group were observed in our study. After treatment, the levels of gamma-linolenic acid, linolelaidic acid, and prostaglandin D1 were downregulated in HLJDD and its fractions. Therefore, in the event of AD, there was a need for more gamma-linolenic acid, linolelaidic acid, and prostaglandin D1 in order to combat mast cell and keratinocyte activation. After treatment, higher levels of metabolites were also improved over time following the symptoms of AD amelioration. Thus, HLJDD may play an anti-inflammatory role during the treatment of AD by downregulating the expression of gamma-linolenic acid. The levels of amino acids, including L-alloisoleucine, N-methyl-D-aspartic acid, and L-alanyl-L-glutamine, were decreased and L-alanine was increased in the AD model group. Specifically, isoleucine is a branched-chain amino acid (BCAA). Changes in the metabolites involved in the BCAA pathway are known to influence the regulation of mTOR (<xref ref-type="bibr" rid="B21">Jewell and Guan, 2013</xref>; <xref ref-type="bibr" rid="B69">Zhenyukh et&#x20;al., 2017</xref>), which plays a vital role in epidermal barrier formation and the signaling axis for the control of filaggrin as the fundamental pathophysiology of AD (<xref ref-type="bibr" rid="B57">Xda et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B61">Yang et&#x20;al., 2014</xref>). Both N-methyl-D-aspartate and L-alanyl-L-glutamine are important excitatory neurotransmitters in the central nervous system and are associated with scratching and pathological modification behavior in AD-like mice (<xref ref-type="bibr" rid="B15">Fujii et&#x20;al., 2018</xref>; <xref ref-type="bibr" rid="B16">Funakushi et&#x20;al., 2011</xref>). The etiology of AD has been linked to deficiencies in the histamine-rich epidermal barrier protein filaggrin (<xref ref-type="bibr" rid="B37">Palmer et&#x20;al., 2006</xref>). Carnosine and histamine are involved in histidine metabolism; their levels were significantly upregulated in the AD model group, demonstrating that histidine metabolism disorders occurred in AD. Similarly, the levels of these amino acids were reversed in the HLJDD and its fraction groups. The tricarboxylic acid (TCA) cycle, reflected in the altered DL-malic acid level found in this study, can shape immune cell responses via changes in the metabolic pathways of immune cells (<xref ref-type="bibr" rid="B33">O&#x2019;Neill et&#x20;al., 2016</xref>). In addition, the other differential metabolites (phosphocreatinine, 2&#x2032;-deoxyuridine, 1H-pyrimidine-2,4-dione, and biliverdine) identified in this study also have implications for AD treatment.</p>
</sec>
<sec sec-type="conclusion" id="s5">
<title>Conclusion</title>
<p>The present study utilized chemistry, biochemistry, and metabolomics analysis to dissect the pharmacological mechanism and substance basis of HLJDD in AD. This paper is the first to report on the development and validation of a multivariate analysis method to qualitatively and quantitatively analyze the non-similarity degree, which was suited to the non-similarity degrees of splitting fractions of HLJDD. Further, HLJDD exhibited anti-AD effects by inhibiting itching and enhancing immunity, which in turn regulating the levels of relative metabolites, and CPF and 40AEF were considered the most important components of HLJDD. This study provided novel insight into how chemistry, biochemistry, and metabolomics could be used as effective tools for elucidating the efficacy of HLJDD on&#x20;AD.</p>
</sec>
</body>
<back>
<sec id="s6">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s12">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7">
<title>Ethics Statement</title>
<p>The animal study was reviewed and approved by the Bioethics Committee of Shanghai Tenth People&#x2019;s Hospital (ID no. SHDSYY-2020-9001).</p>
</sec>
<sec id="s8">
<title>Author Contributions</title>
<p>JC and YX performed the experiments, analyzed the data, and wrote the article. JC and JC provided help with the animal experiments. SC, BS, and ZJ provided help with the data analysis. JC and YX designed the study. JC, SC, and YX modified the final article.</p>
</sec>
<sec id="s9">
<title>Funding</title>
<p>These studies were supported by funding obtained from the Natural Science Foundation of China (81803681), Zhejiang Provincial Medical and Health Science and Technology Plan Project (2020KY370), Zhejiang Province TCM Science and Technology plan (2020ZQ050).</p>
</sec>
<sec sec-type="COI-statement" id="s10">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s11">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>The authors thank Shanghai Biotree Biotech Co., Ltd., for assistance in UPLC-MS data analysis.</p>
</ack>
<sec id="s12">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fphar.2021.770524/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fphar.2021.770524/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.ZIP" id="SM1" mimetype="application/ZIP" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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