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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Oncol.</journal-id>
<journal-title>Frontiers in Oncology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Oncol.</abbrev-journal-title>
<issn pub-type="epub">2234-943X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fonc.2023.1115835</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Oncology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The associated risk of <italic>Blastocystis</italic> infection in cancer: A case control study</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Labania</surname>
<given-names>Lena</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2100170"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zoughbor</surname>
<given-names>Sumaya</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2192753"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ajab</surname>
<given-names>Suad</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2192801"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Olanda</surname>
<given-names>Marie</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shantour</surname>
<given-names>Sulaiman N. M.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Al Rasbi</surname>
<given-names>Zakeya</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2097890"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Microbiology and Immunology, College of Medicine and Health Sciences, United Arab Emirates University</institution>, <addr-line>Abu Dhabi</addr-line>, <country>United Arab Emirates</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Zayed Bin Sultan Center for Health Sciences, College of Medicine and Health Sciences, United Arab Emirates University</institution>, <addr-line>Abu Dhabi</addr-line>, <country>United Arab Emirates</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Institute of Public Health, College of Medicine and Health Sciences, United Arab Emirates University</institution>, <addr-line>Abu Dhabi</addr-line>, <country>United Arab Emirates</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>General Surgery Division, Surgery Department, Tawam Hospital</institution>, <addr-line>Abu Dhabi</addr-line>, <country>United Arab Emirates</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Michael Linnebacher, University Medical Center Rostock, Germany</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Muhammad Jameel, George Washington University, United States; Katie Lynn Summers, USDA, United States</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Zakeya Al Rasbi, <email xlink:href="mailto:rasbi@uaeu.ac.ae">rasbi@uaeu.ac.ae</email>
</p>
</fn>
<fn fn-type="equal" id="fn003">
<p>&#x2020;These authors have contributed equally to this work</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Gastrointestinal Cancers: Colorectal Cancer, a section of the journal Frontiers in Oncology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>20</day>
<month>02</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>13</volume>
<elocation-id>1115835</elocation-id>
<history>
<date date-type="received">
<day>12</day>
<month>12</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>27</day>
<month>01</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Labania, Zoughbor, Ajab, Olanda, Shantour and Al Rasbi</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Labania, Zoughbor, Ajab, Olanda, Shantour and Al Rasbi</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<sec>
<title>Background</title>
<p>
<italic>Blastocystis</italic> is an anaerobic intestinal protozoan. Nine <italic>Blastocystis</italic> subtypes (STs) were detected in humans. A subtype-dependent association between <italic>Blastocystis</italic> and different cancer types has been debated in many studies. Thus, this study aims to assess the possible association between <italic>Blastocystis</italic> infection and cancer, especially colorectal cancer (CRC). We also screened the presence of gut fungi and their association with <italic>Blastocystis</italic>.</p>
</sec>
<sec>
<title>Methods</title>
<p>We used a case-control design; cancer patients and cancer-free (CF) participants. The cancer group was further sub-group into CRC group and cancers outside the gastrointestinal tract (COGT) group. Macroscopic and microscopic examinations were performed to identify intestinal parasites in participants&#x2019; stool samples. Molecular and phylogenetic analyses were conducted to identify and subtype <italic>Blastocystis</italic>. Furthermore, gut fungi were investigated molecularly.</p>
</sec>
<sec>
<title>Results</title>
<p>104 stool samples were collected and matched between CF (n=52) and cancer patients (n=52); CRC (n=15) and COGT (n=37). As anticipated, <italic>Blastocystis</italic> prevalence was significantly higher among CRC patients (60%, P=0.002) and insignificant in COGT patients (32.4%, <italic>P</italic>=0.161) compared to CF group (17.3%). The most common subtypes were ST2 among cancer group and ST3 in the CF group.</p>
</sec>
<sec>
<title>Conclusion</title>
<p>Cancer patients have a higher risk of <italic>Blastocystis</italic> infection compared to CF individuals (OR=2.98, <italic>P</italic>=0.022). Increased risk of <italic>Blastocystis</italic> infection was associated with CRC patients (OR=5.66, <italic>P</italic>=0.009). Nevertheless, further studies are required to understand the underlying mechanisms of <italic>Blastocystis</italic> and cancer association.</p>
</sec>
</abstract>
<kwd-group>
<kwd>colorectal cancer</kwd>
<kwd>ST subtypes</kwd>
<kwd>phylogenetic analysis</kwd>
<kwd>UAE</kwd>
<kwd>
<italic>Blastocystis</italic> infection</kwd>
<kwd>cancer</kwd>
<kwd>Fungi</kwd>
</kwd-group>
<contract-sponsor id="cn001">College of Medicine and Health Sciences, United Arab Emirates University<named-content content-type="fundref-id">10.13039/501100006014</named-content>
</contract-sponsor>
<counts>
<fig-count count="2"/>
<table-count count="4"/>
<equation-count count="0"/>
<ref-count count="66"/>
<page-count count="10"/>
<word-count count="4418"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>
<italic>Blastocystis</italic> is an anaerobic intestinal protozoan found in humans and a wide range of animals. Morphological forms of <italic>Blastocystis</italic> include vacuolar, granular, amoeboid, and cyst forms, the vacuolar form is predominant in fresh stool samples and laboratory cultures (<xref ref-type="bibr" rid="B1">1</xref>). The <italic>Blastocystis</italic> prevalence rate is 60% in developing countries, due to poor hygiene and close contact with animals, compared to developed countries (5-20%) (<xref ref-type="bibr" rid="B2">2</xref>). More than 17 subtypes (STs) of <italic>Blastocystis</italic> spp. are known, and only nine subtypes are found in humans (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B4">4</xref>). <italic>Blastocystis</italic> was considered a commensal parasite and caused asymptomatic infections at most. However, there is an increasing number of studies investigating the role and pathogenicity of <italic>Blastocystis</italic> in the gut (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B4">4</xref>).</p>
<p>Some studies showed that <italic>Blastocystis</italic> infections contributed to the severity of multiple conditions, such as AIDs, cancer, IBD, and gut microbiota dysbiosis (<xref ref-type="bibr" rid="B5">5</xref>&#x2013;<xref ref-type="bibr" rid="B7">7</xref>). Conversely, other studies have shown that the presence of <italic>Blastocystis</italic> promotes high diversity of gut microbiota in healthy individuals preventing intestinal disorders (<xref ref-type="bibr" rid="B8">8</xref>, <xref ref-type="bibr" rid="B9">9</xref>). <italic>Blastocystis</italic> culture filtrates did not affect the growth of cancer cell lines in one study (<xref ref-type="bibr" rid="B10">10</xref>). These conflicting findings are probably attributed to the genetic diversity of <italic>Blastocystis</italic>, inter and intra-subtype variations (<xref ref-type="bibr" rid="B7">7</xref>, <xref ref-type="bibr" rid="B11">11</xref>, <xref ref-type="bibr" rid="B12">12</xref>).</p>
<p>Globally, cancer is regarded as one of the leading causes of death with an estimation of 10 million deaths in 2020 (<xref ref-type="bibr" rid="B13">13</xref>). The most common cancers in order are breast, lung, colorectal, prostate, skin, and stomach cancers according to WHO in 2020 (<xref ref-type="bibr" rid="B13">13</xref>). Some of risk factors include age, family history, obesity, diet, and infectious pathogens (<xref ref-type="bibr" rid="B13">13</xref>, <xref ref-type="bibr" rid="B14">14</xref>). Since 30-50% of cancer is preventable by avoiding its risk factors and 30% of cancer are caused by infectious pathogens, it is important to identify all possible cancer-promoting infections to limit progression of existing cases and emergence of new cases (<xref ref-type="bibr" rid="B13">13</xref>). Colorectal cancer (CRC) is the third most common cancer, and the second leading cause of cancer-related deaths worldwide (2020) (<xref ref-type="bibr" rid="B15">15</xref>). CRC cases are detected in males more than females. The majority of CRC cases are diagnosed in the late stages of the disease, partially due to its non-specific symptoms (<xref ref-type="bibr" rid="B16">16</xref>&#x2013;<xref ref-type="bibr" rid="B19">19</xref>). One of the risk factors of CRC is the gut microbiota dysbiosis (<xref ref-type="bibr" rid="B17">17</xref>&#x2013;<xref ref-type="bibr" rid="B20">20</xref>). Several studies have investigated the role of microbiota in different cancers initiation or progression (<xref ref-type="bibr" rid="B21">21</xref>&#x2013;<xref ref-type="bibr" rid="B27">27</xref>). However, previous studies focused on the bacterial content overlooking other micro-organisms such as protozoa and fungi (<xref ref-type="bibr" rid="B28">28</xref>).</p>
<p>Since <italic>Blastocystis spp.</italic> is considered a normal intestinal flora, investigating <italic>Blastocystis</italic> association with cancer, focusing on CRC, is essential to understanding the gut microbiota effect on tumor initiation and progression (<xref ref-type="bibr" rid="B8">8</xref>, <xref ref-type="bibr" rid="B29">29</xref>). Many studies investigated the interaction between <italic>Blastocystis</italic> spp. and gut microbiota, and one study reported an association between <italic>Blastocystis</italic> with increased levels of five gut fungi (Mycobiota) (<xref ref-type="bibr" rid="B7">7</xref>&#x2013;<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B30">30</xref>). Other studies associated gut mycobiota with carcinogenesis, initiation, and development of different cancers (<xref ref-type="bibr" rid="B20">20</xref>, <xref ref-type="bibr" rid="B31">31</xref>&#x2013;<xref ref-type="bibr" rid="B33">33</xref>). Thus, this study aimed to assess the possible association between <italic>Blastocystis</italic> infection and fungi in cancer patients locally. Then, compare <italic>Blastocystis</italic> infection in different cancers&#x2019; patients to cancer-free controls (CF).</p>
</sec>
<sec id="s2">
<label>2</label>
<title>Methods</title>
<sec id="s2_1">
<label>2.1</label>
<title>Study design</title>
<p>In this observational study, a matched case-control study design was used. The case patients affected by cancer were gender and age-group-matched with a CF control group. The study participants were recruited from March 2020 to April 2022. This study followed the STROBE guidelines (<xref ref-type="bibr" rid="B34">34</xref>).</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Study population and variables</title>
<p>All participants signed informed consent (n=104), and the study was performed per the Declaration of Helsinki. Participants of both genders were 18 years old and above. Age was categorized into three groups: Youth (18-24 years old), adults (25-59 years old), and elderly (&#x2265;60 years old). Nationalities were classified into six regions of origin: Africa, Americas, South-East Asia, Europe, Eastern Mediterranean, and Western Pacific. Patients who took any anti-parasitic drug in the last six months, did not provide informed consent, or were unwilling to give a stool sample were excluded from this study. The consumption of antibiotics, gastrointestinal surgery history in the past two years, hospitalization, cancer therapy, and the number of therapy cycles were extracted from patients&#x2019; medical records.</p>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>Case patients</title>
<p>Patients referred to the Oncology Services at Tawam Hospital, United Arab Emirates, with confirmed cancer (n=52) cases histopathologically, in any stage, and undergoing any treatment were included in this study. The cases were further sub-categorized into two groups: CRC (n=15) and cancers outside the gastrointestinal tract (COGT) (n=37) patients.</p>
</sec>
<sec id="s2_4">
<label>2.4</label>
<title>Control participants</title>
<p>Community-based control participants (n=52) were gender- and age-group matched subjects recruited. Excluding subjects with intestinal disorders, immunological or neoplastic disorders, and antibiotics users in the last six months before recruitment.</p>
</sec>
<sec id="s2_5">
<label>2.5</label>
<title>Sample collection and processing</title>
<p>Stool samples were collected using a commercial stool collection kit (alpha laboratories, UK). All stool samples were transported for analysis to the Microbiology Laboratory, College of Medicine and Health Sciences (CMHS), United Arab Emirates University (UAEU). Stool samples were each split into two parts; one was stored at 4&#xb0;C and processed within one to two days for macroscopy, and microscopy, while the second was put in Eppendorf tubes and stored at -20&#xb0;C for molecular work.</p>
</sec>
<sec id="s2_6">
<label>2.6</label>
<title>Macroscopic and microscopic investigation</title>
<p>As mentioned previously (<xref ref-type="bibr" rid="B35">35</xref>), macroscopic and microscopic examinations were performed to define the types of organisms and check for blood and mucus. Stool samples were stained with Wheatley Trichrome for <italic>Blastocystis</italic> detection, following the manufacturer&#x2019;s instructions. Then, smears were examined microscopically under &#xd7;40 and &#xd7;100 magnification objectives. Two microbiologists examined all stool slides independently.</p>
</sec>
<sec id="s2_7">
<label>2.7</label>
<title>Molecular investigation</title>
<p>Genomic DNA was extracted from stool samples as previously published (<xref ref-type="bibr" rid="B35">35</xref>). Primers and PCR conditions used are listed in <xref ref-type="supplementary-material" rid="SM1">
<bold>Table S1</bold>
</xref>. <italic>Blastocystis</italic> spp. and gut fungi DNAs were amplified by Polymerase Chain Reaction (PCR). A mix of 5&#xb5;l of 5x Q-Solution, 2.5&#xb5;l of 10x CoralLoad PCR buffer, 1&#xb5;l of each primer (10mM), 0.5&#xb5;l of QIAGEN Taq DNA Polymerase (250U),1&#xb5;l of dNTP Blend (100mM) (Applied Biosystems, USA), and 2&#xb5;l of stool genomic DNA diluted in free-nuclease water to reach final volume of 25&#xb5;l. For the ITS reaction mixtures, an extra 0.5&#xb5;l of MgCl<sub>2</sub> was added.</p>
</sec>
<sec id="s2_8">
<label>2.8</label>
<title>Sequencing and phylogenetic analysis</title>
<p>Gel and PCR Clean-Up System (Promega, Madison, Wisconsin, USA) was used following the manufacturer&#x2019;s instructions. Barcode region and ITS primers were used to sequence the purified products in both directions <italic>via</italic> capillary electrophoresis using a Big DyeTM Terminator Cycle Sequencing Kit (Applied Biosystems, Foster City, CA, USA) in ABI PRISM 3130xI Genetic Analyzer. The confirmed <italic>Blastocystis</italic>-positive sequences were assigned to the best-matched <italic>Blastocystis</italic> subtype by aligning them to reference sequences in the GenBank database using nBLAST program (<xref ref-type="bibr" rid="B36">36</xref>). Query cover and per identity of &#x2265;97% were used to determine subtypes matches. The ClustalW algorithm of MEGA-X was used to align the sequences (<xref ref-type="bibr" rid="B37">37</xref>). Acquired sequences were submitted to PubMLST database to confirm subtypes and identify relevant alleles (<xref ref-type="bibr" rid="B38">38</xref>). The established fungi-positive sequences were assigned to the best-match fungi species by aligning them to reference sequences in the GenBank database. Query cover of &#x2265;80% and 97-100% per identity were used to determine the most probable match.</p>
<p>
<italic>Blastocystis</italic> samples and reference sequences along with an outgroup species (<italic>Proteromonas lacertae</italic>, GenBank accession no. U37108) went through phylogenetic analysis. The best substitution models were determined <italic>via</italic> the Bayesian information criterion. The maximum Likelihood (ML) method and Bayesian Inference (BI) were used to construct the tree. ML tree was constructed using MEGA-X. Tamura 3-parameter with gamma distribution was used, and Bootstrapping analysis with 1000 replicates was performed. For the BI method, Jmodeltest v2.1.10 and MrBayes v3.2.7 were used (<xref ref-type="bibr" rid="B39">39</xref>, <xref ref-type="bibr" rid="B40">40</xref>). Hasegawa-Kishino-Yano model with gamma distribution was used, and four Markov chains were run for 5 million generations, with a sampling frequency of 100 and a 25% burn-in. Tree Graph 2 combined the two constructed trees (<xref ref-type="bibr" rid="B41">41</xref>).</p>
</sec>
<sec id="s2_9">
<label>2.9</label>
<title>Statistical analysis</title>
<p>Data were analyzed by IBM SPSS Statistics v26.0. Qualitative variables were expressed as numbers and percentages, while quantitative variables were expressed as means and medians. The chi-square, Fisher&#x2019;s Exact, and Fisher-Freeman-Halton tests for categorical variables. Logistic regression was used to predict factors associated with <italic>Blastocystis</italic> prevalence, and a <italic>p</italic>-value of &#x2264;&#x2009;0.05 indicated statistical significance.</p>
</sec>
<sec id="s2_10">
<label>2.10</label>
<title>Ethical approval</title>
<p>The study was approved by the Tawam Human Research Ethics Committee (T-HREC) of Tawam Hospital, Al Ain, Abu Dhabi, UAE (THREC-678).</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results</title>
<p>In this case-control study, a total of 104 matched participants were recruited. The controls were CF participants (n=52), and the cases were cancer patients (n=52) (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S2</bold>
</xref>). The study participants consisted of 44 males (42.3%) and 60 females (57.7%). CF participants&#x2019; mean age was 43.3 (median: 41.5, range: 23-87). Cancer patients&#x2019; mean age was 49.3 (median: 51, range: 22-75). There was no statistical association between <italic>Blastocystis</italic> infection and gender (<italic>P</italic>=0.147) nor <italic>Blastocystis</italic> infection and age groups (<italic>P</italic>=0.277). The prevalence of <italic>Blastocystis</italic> among regions differed but was statistically insignificant (<italic>P</italic>=0.056).</p>
<p>Of the cancer patients, 37 patients were COGT, while 15 individuals were CRC patients. COGT patients were of 19 different cancer types reclassified into 8 categories based on tumor site (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S2</bold>
</xref>). The majority of patients had breast cancer (n=16, 15.4%), and hematologic cancer (n=9, 8.7%). The <italic>Blastocystis</italic> prevalence within cancer types was statistically insignificant (<italic>P</italic>=0.440). Also, antibiotics usage, GIT surgery history, number of chemotherapy cycles and hospitalization were statistically insignificant to <italic>Blastocystis</italic> infection (<italic>P</italic>=0.721, <italic>P</italic>=0.07, <italic>P</italic>=0.705, and <italic>P</italic>=0.241) in cancer group (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S3</bold>
</xref>).</p>
<sec id="s3_1">
<label>3.1</label>
<title>Stool analysis</title>
<p>Stool samples macroscopic parameters had an insignificant association with <italic>Blastocystis</italic> infection. Thirteen samples were positive for <italic>Blastocystis via</italic> microscopy (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Moreover, eight other protozoans and three helminths were identified in participants&#x2019; stool samples, and the majority of infections were identified in CF group. The most common protozoa found were <italic>Entamoeba</italic>, <italic>Cryptosporidium</italic>, and <italic>Retortamonas intestinalis</italic> (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S4</bold>
</xref>), and the most common helminths infection were <italic>Enterobius vermicularis</italic> and <italic>Ascaris lumbricoides</italic> (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S4</bold>
</xref>). <italic>Blastocystis</italic> co-infection was studied; however, there was no significant association with other intestinal parasites.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>
<italic>Blastocystis</italic> cyst (black arrow) in stool sample stained with Trichrome stain at 100x magnification objectives using light microscopy.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1115835-g001.tif"/>
</fig>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Molecular investigation: Blastocystis infection</title>
<p>Twenty-four samples were <italic>Blastocystis</italic>-positive <italic>via</italic> PCR and 13 <italic>via</italic> microscopy (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S5</bold>
</xref>). In total, 30 samples were <italic>Blastocystis</italic>-positive regardless of the detection method (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). As anticipated, <italic>Blastocystis</italic> prevalence was significantly higher among all cancer types (40.4%) compared to CF group (17.3%) (<italic>P</italic>=0.009). Also, <italic>Blastocystis</italic> prevalence was significantly higher in CRC sub-group (60%) compared to CF group (<italic>P</italic>=0.002). However, COGT sub-group (32.4%) was insignificant compared to CF group (<italic>P</italic>=0.161).</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Logistic regression and Pearson chi-square test of <italic>Blastocystis</italic> infection among the study population (n = 104).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="2" align="left">Study groups</th>
<th valign="middle" colspan="4" align="center">
<italic>Blastocystis</italic> infection</th>
<th valign="middle" colspan="3" align="center">Logistic Regression Analysis</th>
</tr>
<tr>
<th valign="middle" align="center">No. Examined</th>
<th valign="middle" align="center">Positive<break/>n (%)</th>
<th valign="middle" align="center">Negative<break/>n (%)</th>
<th valign="middle" align="center">&#x3c7;<sup>2/</sup>P-value</th>
<th valign="middle" align="center">aOR*</th>
<th valign="middle" align="center">95% CI</th>
<th valign="middle" align="center">P-value</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">Cancer-free</td>
<td valign="middle" align="center">52</td>
<td valign="middle" align="center">9 (17.3)</td>
<td valign="middle" align="center">43 (82.7)</td>
<td valign="middle" align="center">Ref.</td>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">
<italic>Ref.</italic>
</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="left">Cancer</td>
<td valign="middle" align="center">52</td>
<td valign="middle" align="center">21 (40.4)</td>
<td valign="middle" align="center">31 (59.6)</td>
<td valign="middle" align="center">0.009</td>
<td valign="middle" align="center">2.98</td>
<td valign="middle" align="center">1.169-7.577</td>
<td valign="middle" align="center">0.022</td>
</tr>
<tr>
<th valign="middle" colspan="8" align="left">Cancer patients&#x2019; sub-groups</th>
</tr>
<tr>
<td valign="middle" align="left">COGT</td>
<td valign="middle" align="center">37</td>
<td valign="middle" align="center">12 (32.4)</td>
<td valign="middle" align="center">25 (67.6)</td>
<td valign="middle" align="center">0.161</td>
<td valign="middle" align="center">2.28</td>
<td valign="middle" align="center">0.825-6.291</td>
<td valign="middle" align="center">0.112</td>
</tr>
<tr>
<td valign="middle" align="left">CRC</td>
<td valign="middle" align="center">15</td>
<td valign="middle" align="center">9 (60)</td>
<td valign="middle" align="center">6 (40)</td>
<td valign="middle" align="center">0.002</td>
<td valign="middle" align="center">5.66</td>
<td valign="middle" align="center">1.531-20.895</td>
<td valign="middle" align="center">0.009</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>P-value &#x2264;&#x2009;0.05: indicates a statistical significance.</p>
</fn>
<fn>
<p>CI, confidence interval.</p>
</fn>
<fn>
<p>*aOR, odds ratio adjusted for age and gender, goodness of fit test: Hosmer and Lemeshow Test p&gt;0.05.</p>
<p>-, NA or Zero value.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>The odds of <italic>Blastocystis</italic> infection were almost threefold higher in cancer group than in the CF group (OR=2.98, <italic>P=</italic>0.022) and more than fivefold higher in the CRC group (OR= 5.66, <italic>P=</italic>0.009). In contrast, the <italic>Blastocystis</italic> infection odds in COGT to CF group were insignificant (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). <italic>Blastocystis</italic> fold change between CRC and COGT groups was insignificant (OR=2.35, <italic>P=</italic>0.209), even though the prevalence of <italic>Blastocystis</italic> spp. in CRC group alone was high (60%) (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>).</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Logistic regression and Pearson chi-square test of <italic>Blastocystis</italic> infection among cases, COGT vs. CRC group.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="2" align="left">Cancer groups</th>
<th valign="middle" colspan="4" align="center">
<italic>Blastocystis</italic> infection</th>
<th valign="middle" colspan="3" align="center">Logistic Regression Analysis</th>
</tr>
<tr>
<th valign="middle" align="center">No. Examined</th>
<th valign="middle" align="center">Positive<break/>n (%)</th>
<th valign="middle" align="center">Negative<break/>n (%)</th>
<th valign="middle" align="center">&#x3c7;<sup>2/</sup>P-value</th>
<th valign="middle" align="center">aOR*</th>
<th valign="middle" align="center">95% CI</th>
<th valign="middle" align="center">P-value</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">COGT</td>
<td valign="middle" align="center">37</td>
<td valign="middle" align="center">12 (32.4)</td>
<td valign="middle" align="center">25 (67.6)</td>
<td valign="middle" align="center">Reference</td>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">Reference</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="left">CRC</td>
<td valign="middle" align="center">15</td>
<td valign="middle" align="center">9 (60)</td>
<td valign="middle" align="center">6 (40)</td>
<td valign="middle" align="center">0.128</td>
<td valign="middle" align="center">2.35</td>
<td valign="middle" align="center">0.620-8.868</td>
<td valign="middle" align="center">0.209</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>P-value &#x2264;&#x2009;0.05: indicates a statistical significance.</p>
</fn>
<fn>
<p>CI, confidence interval.</p>
</fn>
<fn>
<p>*aOR: odds ratio adjusted for age and gender, goodness of fit test: Hosmer and Lemeshow Test p&gt;0.05.</p>
<p>-, NA or Zero value.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Molecular investigation: Gut fungi</title>
<p>Via gel electrophoresis, amplicon size of ~450-800bp using ITS primers was considered positive for gut fungi. Sixty individuals (57.7%) were tested positive for gut fungi, of which 30 were from CF group (57.7%), and 30 were from the cancer group (57.7%). Twenty-two individuals (59.5%) of the COGT subgroup had gut fungi, and 8 (53.3%) of the CRC subgroup.</p>
<p>Thirty-nine fungi-positive samples were sequenced. Eleven types of fungi were identified; eight were gut mycobiome, and three were environmental fungal species (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>). <italic>Saccharomyces cerevisiae</italic> was the most common gut fungi (n=25, 62.5%). <italic>S. cerevisiae</italic> was detected in 17 samples (77.3%) from CF group and 8 samples (44.4%) from the cancer group. However, <italic>S. cerevisiae</italic> prevalence was not significantly associated with cancer (<italic>P</italic>=0.193) nor <italic>Blastocystis</italic> spp.(<italic>P</italic>=0.478).</p>
<table-wrap id="T3" position="float">
<label>Table&#xa0;3</label>
<caption>
<p>Fungal species detected among the study population (n = 104).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="2" align="left">Fungi species</th>
<th valign="middle" rowspan="2" align="center">Cancer-free<break/>n (%)</th>
<th valign="middle" colspan="2" align="center">Cancer n (%)</th>
<th valign="middle" rowspan="2" align="center">Total n (%)</th>
</tr>
<tr>
<th valign="middle" align="center">COGT<break/>n (%)</th>
<th valign="middle" align="center">CRC<break/>n (%)</th>
</tr>
</thead>
<tbody>
<tr>
<th valign="middle" colspan="5" align="left">Gut fungi</th>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Saccharomyces cerevisiae</italic>
</td>
<td valign="middle" rowspan="2" align="center">17 (77.3)</td>
<td valign="middle" colspan="2" align="center">
<bold>8 (44.4)</bold>
</td>
<td valign="middle" rowspan="1" align="center">25 (62.5)</td>
</tr>
<tr>
<td valign="middle" align="center">7 (50)</td>
<td valign="middle" align="center">1 (25)</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Candida glabrata</italic>
</td>
<td valign="middle" rowspan="2" align="center">&#x2013;</td>
<td valign="middle" colspan="2" align="center">
<bold>3 (16.7)</bold>
</td>
<td valign="middle" rowspan="1" align="center">3 (7.5)</td>
</tr>
<tr>
<td valign="middle" align="center">2 (14.3)</td>
<td valign="middle" align="center">1 (25)</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Penicillium species</italic>
</td>
<td valign="middle" rowspan="2" align="center">&#x2013;</td>
<td valign="middle" colspan="2" align="center">
<bold>1 (5.6)</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">1 (7.1)</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Pichia Kudriavzevii/ Candida kruzei</italic>
</td>
<td valign="middle" rowspan="2" align="center">1 (4.5)</td>
<td valign="middle" colspan="2" align="center">
<bold>-</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Aspergillus species</italic>
</td>
<td valign="middle" rowspan="2" align="center">&#x2013;</td>
<td valign="middle" colspan="2" align="center">
<bold>2 (11.1)</bold>
</td>
<td valign="middle" rowspan="1" align="center">2 (5)</td>
</tr>
<tr>
<td valign="middle" align="center">1 (7.1)</td>
<td valign="middle" align="center">1 (25)</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Galactomyces geotrichum</italic>
</td>
<td valign="middle" rowspan="2" align="center">&#x2013;</td>
<td valign="middle" colspan="2" align="center">
<bold>1 (5.6)</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">1 (7.1)</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Candida albicans</italic>
</td>
<td valign="middle" rowspan="2" align="center">2 (9.1)</td>
<td valign="middle" colspan="2" align="center">
<bold>1 (5.6)</bold>
</td>
<td valign="middle" rowspan="1" align="center">3 (7.5)</td>
</tr>
<tr>
<td valign="middle" align="center">1 (7.1)</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Candida tropicalis</italic>
</td>
<td valign="middle" rowspan="2" align="center">&#x2013;</td>
<td valign="middle" colspan="2" align="center">
<bold>1 (5.6)</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">1 (7.1)</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<th valign="middle" colspan="5" align="left">Environmental fungi</th>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Torulaspora delbruckii</italic>
</td>
<td valign="middle" rowspan="2" align="center">&#x2013;</td>
<td valign="middle" colspan="2" align="center">
<bold>1 (5.6)</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">1 (25)</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Hanseniaspora uvarum</italic>
</td>
<td valign="middle" rowspan="2" align="center">1 (4.5)</td>
<td valign="middle" colspan="2" align="center">
<bold>-</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">
<italic>&#x2003;Kazachstania servazzii</italic>
</td>
<td valign="middle" rowspan="2" align="center">1 (4.5)</td>
<td valign="middle" colspan="2" align="center">
<bold>-</bold>
</td>
<td valign="middle" rowspan="1" align="center">1 (2.5)</td>
</tr>
<tr>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" rowspan="2" align="left">Total n (%)</td>
<td valign="middle" rowspan="2" align="center">22 (55)</td>
<td valign="middle" colspan="2" align="center">
<bold>18 (45)</bold>
</td>
<td valign="middle" rowspan="1" align="center">40 (100)</td>
</tr>
<tr>
<td valign="middle" align="center">14 (35)</td>
<td valign="middle" align="center">4 (10)</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Bold values indicates no.(%) of each fungus found in the cancer group.</p>
<fn>
<p>-, NA or Zero value.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s3_4">
<label>3.4</label>
<title>Blastocystis subtyping and phylogenetic analysis</title>
<p>Eighteen samples were <italic>Blastocystis</italic>-subtyped <italic>via</italic> sequencing. The most common <italic>Blastocystis</italic> subtype was ST3 (n=8, 44.4%), then ST2 (n=6, 33.3%) (<xref ref-type="table" rid="T4">
<bold>Table&#xa0;4</bold>
</xref>), In our study, the most common subtype was ST3 (n=5, 55.6%) in CF group and ST2 (n=5, 55.6%) in the cancer group, and only one ST7 was detected in a breast cancer patient.</p>
<table-wrap id="T4" position="float">
<label>Table&#xa0;4</label>
<caption>
<p>Distribution of <italic>Blastocystis</italic> subtypes among cancer-free and cancer groups.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">Study groups</th>
<th valign="middle" align="center">Subtype 1</th>
<th valign="middle" align="center">Subtype 2</th>
<th valign="middle" align="center">Subtype 3</th>
<th valign="middle" align="center">Subtype 7</th>
<th valign="middle" align="center">Total n (%)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">Cancer-free <bold>n (%)</bold>
</td>
<td valign="middle" align="center">3 (33.3)</td>
<td valign="middle" align="center">1 (11.1)</td>
<td valign="middle" align="center">5 (55.6)</td>
<td valign="middle" align="center">0 (0)</td>
<td valign="middle" align="center">9 (50)</td>
</tr>
<tr>
<td valign="middle" align="left">Cancer <bold>n (%)</bold>
</td>
<td valign="middle" align="center">0 (0)</td>
<td valign="middle" align="center">5 (55.6)</td>
<td valign="middle" align="center">3 (33.3)</td>
<td valign="middle" align="center">1 (11.1)</td>
<td valign="middle" align="center">9 (50)</td>
</tr>
<tr>
<td valign="middle" align="left">&#x2003;COGT <bold>n (%)</bold>
</td>
<td valign="middle" align="center">0 (0)</td>
<td valign="middle" align="center">2 (40)</td>
<td valign="middle" align="center">2 (40)</td>
<td valign="middle" align="center">1 (20)</td>
<td valign="middle" align="center">5 (27.8)</td>
</tr>
<tr>
<td valign="middle" align="left">&#x2003;CRC <bold>n (%)</bold>
</td>
<td valign="middle" align="center">0 (0)</td>
<td valign="middle" align="center">3 (75)</td>
<td valign="middle" align="center">1 (25)</td>
<td valign="middle" align="center">0 (0)</td>
<td valign="middle" align="center">4 (22.2)</td>
</tr>
<tr>
<td valign="middle" align="left">
<bold>Total</bold>
</td>
<td valign="middle" align="center">
<bold>3 (16.7)</bold>
</td>
<td valign="middle" align="center">
<bold>6 (33.3)</bold>
</td>
<td valign="middle" align="center">
<bold>8 (44.4)</bold>
</td>
<td valign="middle" align="center">
<bold>1 (5.6)</bold>
</td>
<td valign="middle" align="center">
<bold>18 (100)</bold>
</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Bold values indicates no.(%) of each subtype in the study population.</p>
</table-wrap-foot>
</table-wrap>
<p>Fifteen <italic>Blastocystis</italic>-subtyped samples were assigned an accession number <italic>via</italic> GenBank. Allele sequence analyses showed allele 4 in all ST1-positive samples, allele 15 in three ST2-positive samples, and allele 12 in one ST2-positive sample (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S6</bold>
</xref>). In ST3-positive samples, allele 34 (n=2) and allele 36 (n=3) were identified. Allele 137 was identified in the ST7-positive sample.</p>
<p>The ML and BI trees include 15 sample sequences submitted to NCBI GenBank with the accession numbers (OM478515-OM478518, OM478527-OM478529, OM976632, OM976635-OM976638, and ON185813-ON185815) (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). The topologies between the original reconstructed trees with ML (<xref ref-type="supplementary-material" rid="SM1">
<bold>Figure S1</bold>
</xref>) and BI (<xref ref-type="supplementary-material" rid="SM1">
<bold>Figure S2</bold>
</xref>) were broadly consistent. <xref ref-type="supplementary-material" rid="SM1">
<bold>Figure S3</bold>
</xref> shows the branch lengths of the combined tree.</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Dendrogram representing combined (ML+BI) phylogenetic tree inferred using the Barcode region of SSU rRNA gene sequences. This tree includes 15 isolated samples, 19 reference sequences from the GenBank (isolates from Cancer-free participants and CRC patients), 5 sequences of different alleles from PubMLST (AB107968.1, KT438693.1, AB070987.1, AB091234.1, and AB107965.1), and an outgroup (Proteromonas lacertae). The best tree of ML analysis was with Tamura 3-parameter model, while Bayesian tree best model was Hasegawa-Kishino-Yano model. Bootstrapping Proportions of more than 50% are shown on the left side of the branch. Bayesian posterior probability was also performed (ngen=5 million, samplefreq=100 and Burn-in 25%) and values of more than 50% are shown on the right side of the branch. A solid triangle indicates an isolate from a CRC patient, a solid circle indicates an isolate from a COGT patient and a solid square indicates an isolate from a cancer-free patient.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1115835-g002.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<label>4</label>
<title>Discussion</title>
<p>Cancer is one of the most common causes of death worldwide (<xref ref-type="bibr" rid="B15">15</xref>, <xref ref-type="bibr" rid="B42">42</xref>). The majority of new cases in the UAE are among women compared to men. (<xref ref-type="bibr" rid="B42">42</xref>). Colorectal, skin, and prostate cancers are the most prevalent in men, whereas breast, thyroid, and colorectal cancers are the most common in women. (<xref ref-type="bibr" rid="B42">42</xref>). In our study, <italic>Blastocystis</italic> spp. was significantly higher in cancer patients (OR=2.98). Similarly, a regional study from the Kingdom of Saudi Arabia (KSA) reported a significant association between <italic>Blastocystis</italic> infection and patients with cancer (OR=2.15) (<xref ref-type="bibr" rid="B43">43</xref>).</p>
<p>CRC is among the most diagnosed malignancies and mortalities globally (<xref ref-type="bibr" rid="B15">15</xref>). Most incident cancers among Emirati males were related to CRC (<xref ref-type="bibr" rid="B16">16</xref>). In the current study, approximately 60% of CRC patients were infected with <italic>Blastocystis</italic>, which was higher than in previous studies in Iran (23.9%), KSA (29.7%), Egypt (52%), Turkey (7.5%), and Poland (12%) (<xref ref-type="bibr" rid="B43">43</xref>&#x2013;<xref ref-type="bibr" rid="B47">47</xref>). The disparities might be attributed to the <italic>Blastocystis</italic> detection method or the population&#x2019;s diversity (<xref ref-type="bibr" rid="B48">48</xref>). Consistent with the results of other studies, our study reported significantly high odds of <italic>Blastocystis</italic> in CRC patients (<xref ref-type="bibr" rid="B43">43</xref>&#x2013;<xref ref-type="bibr" rid="B46">46</xref>).</p>
<p>
<italic>Blastocystis</italic> spp. prevalence in the COGT group (32.4%) was insignificant compared to CF group (17.3%), similar to previous studies (<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B49">49</xref>). On the other hand, Ta&#x15f;ova et&#xa0;al. reported a significant difference in <italic>Blastocystis</italic> prevalence between hematologic cancer patients (13%) and the non-cancer GIT patients group (1%) (<xref ref-type="bibr" rid="B50">50</xref>).</p>
<p>
<italic>Blastocystis</italic> prevalence did not significantly differ within the cancer types included in our study (<italic>P</italic>=0.440). Furthermore, <italic>Blastocystis</italic> prevalence between CRC (60%) and COGT (32.4%) groups was insignificant (<italic>P</italic>=0.128), in agreement with previous studies on cancer groups (<xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B51">51</xref>, <xref ref-type="bibr" rid="B52">52</xref>). While Yersal and colleagues reported significantly higher <italic>Blastocystis</italic> prevalence in lung cancer (38.1%) compared to other cancer types (7.2-8.9%) (<xref ref-type="bibr" rid="B47">47</xref>).</p>
<p>In this study, patients&#x2019; medical records were assessed to identify potential risk factors associated with <italic>Blastocystis</italic> in cancer patients. <italic>Blastocystis</italic> prevalence association with risk factors tested was found insignificant (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S3</bold>
</xref>), as reported in other studies (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B52">52</xref>).</p>
<p>Except for two patients (breast and hematologic/blood malignancies), all cancer patients in our study had received cancer therapy. Twenty-four cancer patients received chemotherapy, of which 18 (75%) were COGT, and 6 (25%) were CRC. The potential association of the number of completed chemotherapy cycles with <italic>Blastocystis</italic> prevalence was insignificant (<italic>P</italic>=0.705). In contrast, other studies reported that patients receiving at least eight chemotherapy cycles had a significantly higher <italic>Blastocystis</italic> prevalence than patients receiving fewer cycles (<xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B53">53</xref>). Generally, <italic>Blastocystis</italic> infections were detected consistently in patients receiving &#x2265;8 chemotherapy cycles compared to earlier cycles, and compared to patients who did not start treatment (<xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B53">53</xref>, <xref ref-type="bibr" rid="B54">54</xref>). Interestingly, current study findings and previous studies suggest that CRC patients had a significantly higher <italic>Blastocystis</italic> prevalence than healthy participants, regardless of their treatment status (<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B45">45</xref>, <xref ref-type="bibr" rid="B46">46</xref>). Also, COGT patients receiving multiple chemotherapy cycles presented a significantly higher <italic>Blastocystis</italic> infection than healthy participants (<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B50">50</xref>). These findings may help in understanding the complex relationship between <italic>Blastocystis</italic> and cancer and the effects of chemotherapy on <italic>Blastocystis</italic> prevalence.</p>
<p>We have detected more <italic>Blastocystis</italic> infection in males (36.4%) compared to females (23.3%), in agreement with previous studies which have reported that <italic>Blastocystis</italic> was higher in males (11.8-53.8%) versus females (0-46.2%) (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B45">45</xref>, <xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B53">53</xref>). Ali et&#xa0;al. linked the previous findings to more outdoor activities and exposure to infection sources in male patients (<xref ref-type="bibr" rid="B44">44</xref>).</p>
<p>Reportedly, the gut fungi <italic>Aspergillus flavus</italic>, <italic>Debaryomyces hansenii</italic>, <italic>Mucor mucedo</italic>, <italic>Mucor racemosus</italic>, and <italic>Issatchenkia terricola</italic> were significantly higher in the presence of <italic>Blastocystis</italic> (<xref ref-type="bibr" rid="B30">30</xref>). Therefore, we investigated the relationship between <italic>Blastocystis</italic> and gut fungi in cancer patients. Fungal sequences were identified <italic>via</italic> nBLAST and confirmed as gut fungi <italic>via</italic> the human gut mycobiome database published previously (<xref ref-type="bibr" rid="B28">28</xref>, <xref ref-type="bibr" rid="B36">36</xref>, <xref ref-type="bibr" rid="B55">55</xref>, <xref ref-type="bibr" rid="B56">56</xref>). However, none of the aforementioned fungi were detected in our fungi-positive samples. We have detected <italic>S. cerevisiae</italic> in most gut fungi-positive samples 25 (62.5%). Various studies saw <italic>S. cerevisiae</italic> to inhibit CRC progression and metastasis and stimulate apoptosis of cancer cells (<xref ref-type="bibr" rid="B57">57</xref>, <xref ref-type="bibr" rid="B58">58</xref>). <italic>S. cerevisiae</italic> was more prevalent in CF group (77.3%) compared to cancer patients (44.4%) with an insignificant difference (<italic>P</italic>=0.193). The latter observation was consistent with previous studies, except the association was statistically significant (<xref ref-type="bibr" rid="B59">59</xref>, <xref ref-type="bibr" rid="B60">60</xref>).</p>
<p>The predominant <italic>Blastocystis</italic> subtype in this study was ST3 (n=5) in CF group and ST2 (n=5) in cancer patients. In accordance with studies from Egypt and the UAE, where ST3 was the most common subtype in control participants (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B61">61</xref>). On the other hand, studies in KSA and France showed ST2 and ST4 are the most common subtypes in a healthy population (<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B62">62</xref>). Moreover, ST2 was the most common sub-type in cancer group (n=5) and CRC patients(n=3), unlike other studies where ST3 and ST1 were the most predominant sub-type in cancer patients (<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B46">46</xref>, <xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B51">51</xref>, <xref ref-type="bibr" rid="B53">53</xref>).</p>
<p>In our study, the predominant <italic>Blastocystis</italic> subtypes are ST2 and ST3 in COGT group, with the same percentage (40%). Similarly, in Mohamed et&#xa0;al. work, <italic>Blastocystis</italic> ST2 was predominantly seen in COGT patients (43.7%) (<xref ref-type="bibr" rid="B43">43</xref>). Also, we found ST7 in one breast cancer patient while Ali et&#xa0;al. and Poirier et&#xa0;al. found ST7 in two CRC patients and one hematologic cancer patient, respectively (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B62">62</xref>). Those difference in subtyping is possibly due to detection methods variation (<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B63">63</xref>).</p>
<p>To our knowledge, this is the first study in the UAE to investigate <italic>Blastocystis</italic> intra-subtypes (alleles) variations in cancer patients. Few studies examined <italic>Blastocystis</italic> alleles prevalence in healthy individuals (<xref ref-type="bibr" rid="B61">61</xref>, <xref ref-type="bibr" rid="B64">64</xref>). In our research, <italic>Blastocystis</italic> ST3 alleles (34 and 36) were identified in 3 cancer patients and 2 CF participants (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table S6</bold>
</xref>). These alleles were also identified in studies conducted on healthy individuals (<xref ref-type="bibr" rid="B61">61</xref>, <xref ref-type="bibr" rid="B64">64</xref>). We detected <italic>Blastocystis</italic> ST1 allele 4 in CF participants, and ST2 alleles 15 and 12 in cancer patients. While AbuOdeh et&#xa0;al., in the UAE, reported ST1 allele 4, and ST2 allele 9 in healthy subjects (<xref ref-type="bibr" rid="B61">61</xref>). We identified <italic>Blastocystis</italic> ST7 allele 137, a similar finding was reported in Rezaei et&#xa0;al. study (<xref ref-type="bibr" rid="B65">65</xref>). A study from Turkey reported alleles 2, 4, and 88 of ST1, and alleles 34 and 36 of ST3 in cancer patients (<xref ref-type="bibr" rid="B66">66</xref>).</p>
<p>We submitted <italic>Blastocystis</italic> allele sequences OM478515 ST2 and OM478527 ST3 to PubMLST and 15 of the first UAE <italic>Blastocystis</italic> isolates. In this study, <italic>Blastocystis</italic>-ST1-positive controls (n=4) were all of allele 4, ST2-positive controls (n=2) were of allele 9, and ST3-positive controls (n=2) were of allele 34 and allele 36.</p>
<p>In conclusion, <italic>Blastocystis</italic> infection was significantly associated with cancer, with ST2 being the most common subtype. Furthermore, CRC patients had a higher risk of <italic>Blastocystis</italic> infection than CF. Since <italic>Blastocystis</italic> infection is more common among cancer patients than CF individuals, further studies are needed to understand the association between <italic>Blastocystis</italic> infection and cancer in general, and CRC in particular. Thus, routine <italic>Blastocystis</italic> infection screening in cancer patients might be a useful tool to be added to the usual patient&#x2019;s care in the future.</p>
</sec>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478529 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478517 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478518 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478516 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478528 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478526 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank</uri>/, OM478525 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478521 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478519 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478513 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478520 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478514 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478512 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM478511 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976635 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976632 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976639 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, ON185815 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, ON185814 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976638 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976637 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976636 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, ON185813 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976633 <uri xlink:href="https://www.ncbi.nlm.nih.gov/genbank/">https://www.ncbi.nlm.nih.gov/genbank/</uri>, OM976634.</p>
</sec>
<sec id="s6" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The studies involving human participants were reviewed and approved by Tawam Human Research Ethics Committee (T-HREC) of Tawam Hospital, Al Ain, Abu Dhabi, UAE (THREC-678). The patients/participants provided their written informed consent to participate in this study.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>LL: Methodology, data curation, analysis, interpretation, visualization, writing, and editing. SZ: Conception and design, methodology, data analysis, interpretation, revision, and writing. SA: Methodology, interpretation, writing, revision, and editing. MO: Methodology, analysis, and revision. SS: Study design and methodology. ZR: Conception and design, supervision, funding acquisition, methodology, data analysis, interpretation, revision, and editing. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>This work received a grant from the College of Medicine and Health Sciences, United Arab Emirates University (Fund number:12M081)</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>The authors thank Dr. Khalid Balaraj, and Mr. Khaled Al Qawasmeh from Tawam Oncology Center; Dr. Ziad Peerwani, Dr. Timothy Anthony Collyns, Ms. Shiekha Awad Al Kaabi, and Mr. Edmendo Garcia from Tawam Laboratory Divisions; for their enormous help in samples and data collection.</p>
</ack>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fonc.2023.1115835/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fonc.2023.1115835/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet_1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
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