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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Oncol.</journal-id>
<journal-title>Frontiers in Oncology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Oncol.</abbrev-journal-title>
<issn pub-type="epub">2234-943X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fonc.2023.1087852</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Oncology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>A model for predicting degree of malignancy in patients with intraductal papillary mucinous neoplasm</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>He</surname>
<given-names>Xiangyi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2037705"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Fan</surname>
<given-names>Rong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Sun</surname>
<given-names>Jing</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2126274"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ren</surname>
<given-names>Yanhao</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2081123"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname>
<given-names>Xuesong</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1330512"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Rui</surname>
<given-names>Weiwei</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Yuan</surname>
<given-names>Yaozong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2037717"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Zou</surname>
<given-names>Duowu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Gastroenterology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine</institution>, <addr-line>Shanghai</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>School of Mathematical Sciences, Fudan University</institution>, <addr-line>Shanghai</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Departments of Radiology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine</institution>, <addr-line>Shanghai</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Departments of Pathology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine</institution>, <addr-line>Shanghai</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Alberto Brolese, Department of General Surgery and HPB Unit - APSS, Italy</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Stefano Francesco Crin&#xf2;, University of Verona, Italy; Pedro Jos&#xe9; Carlos Rondot Rad&#xed;o, University of Buenos Aires, Argentina; Giovanni Morana, ULSS2 Marca Trevigiana, Italy</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Yaozong Yuan, <email xlink:href="mailto:yyz28@medmail.com.cn">yyz28@medmail.com.cn</email>; Duowu Zou, <email xlink:href="mailto:zdw_pi@126.com">zdw_pi@126.com</email>
</p>
</fn>
<fn fn-type="equal" id="fn003">
<p>&#x2020;These authors have contributed equally to this work</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Gastrointestinal Cancers: Hepato Pancreatic Biliary Cancers, a section of the journal Frontiers in Oncology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>24</day>
<month>01</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>13</volume>
<elocation-id>1087852</elocation-id>
<history>
<date date-type="received">
<day>02</day>
<month>11</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>05</day>
<month>01</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 He, Fan, Sun, Ren, Zhao, Rui, Yuan and Zou</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>He, Fan, Sun, Ren, Zhao, Rui, Yuan and Zou</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<sec>
<title>Background/Objectives</title>
<p>There is no predictive model available to address early stage malignant intraductal papillary mucinous neoplasm (IPMN) including high grade dysplasia (HGD) and pT1a (invasive component&#x2264;0.5 cm). The aim of this study was to establish an objective and sufficient model to predict the degree of malignancy in patients with IPMN, which can be easily applied in daily practice and adopted for any type of lesion.</p>
</sec>
<sec>
<title>Methods</title>
<p>A retrospective cohort study of 309 patients who underwent surgical resection for IPMN was performed. Members of the cohort were randomly allocated to the training or testing set. A detection tree model and random forest model were used for a 3-class classification to distinguish low grade dysplasia (LGD), HGD/pT1a IPMN, and invasive intraductal papillary mucinous cancer (I-IPMC) beyond pT1a.</p>
</sec>
<sec>
<title>Results</title>
<p>Of the 309 patients, 54 (17.4%) had early stage malignancy (19 HGD, 35 pT1a), 49 (15.9%) had I-IPMC beyond pT1a, and 206 (66.7%) had LGD IPMN. We proposed a 3-class classification model using a random forest algorithm, and the model had an accuracy of 99.5% with the training set, and displayed an accuracy of 96.0% with the testing set. We used SHAP for interpretation of the model and showed the top five factors (mural nodule size, main pancreatic duct diameter, CA19-9 levels, lesion edge and common bile duct dilation) were most likely to influence the 3-class classification results in terms of interpretation of the random forest model.</p>
</sec>
<sec>
<title>Conclusions</title>
<p>This predictive model will help assess an individual&#x2019;s risk for different stages of IPMN malignancy and may help identify patients with IPMN who require surgery.</p>
</sec>
</abstract>
<kwd-group>
<kwd>high grade dysplasia</kwd>
<kwd>PT1a</kwd>
<kwd>intraductal papillary mucinous neoplasm</kwd>
<kwd>model</kwd>
<kwd>pancreas</kwd>
</kwd-group>
<contract-num rid="cn001">19ZR1432000</contract-num>
<contract-sponsor id="cn001">Natural Science Foundation of Shanghai<named-content content-type="fundref-id">10.13039/100007219</named-content>
</contract-sponsor>
<counts>
<fig-count count="5"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="53"/>
<page-count count="11"/>
<word-count count="5941"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Intraductal papillary mucinous neoplasms (IPMNs) are precursor lesions of pancreatic adenocarcinoma (<xref ref-type="bibr" rid="B1">1</xref>). Classification of low grade dysplasia (LGD), high grade dysplasia (HGD), and invasive intraductal papillary mucinous carcinoma (I-IPMC) is based on the degree of cyto-architectural dysplasia in accordance with the World Health Organization (WHO) classification system published in 2019 (<xref ref-type="bibr" rid="B2">2</xref>). Several reports have shown that I-IPMC has characteristics similar to pancreatic ductal adenocarcinoma (PDAC), including potential lymph node (LN) or distant metastasis, postoperative recurrence, and poor survival (<xref ref-type="bibr" rid="B3">3</xref>&#x2013;<xref ref-type="bibr" rid="B9">9</xref>). Depending on the grade of IPMN during the progression from noninvasive IPMN to invasive IPMC, the choice of treatment varies from a conservative approach to radical pancreatectomy with LN dissection (<xref ref-type="bibr" rid="B10">10</xref>). Therefore, it is important to determine the grade of IPMN accurately to optimize the therapy and follow-up strategy. Preoperative distinction of IPMN grade is not easy, even when multiple modalities are used (<xref ref-type="bibr" rid="B10">10</xref>&#x2013;<xref ref-type="bibr" rid="B17">17</xref>). Several guidelines propose radiological and clinical criteria to assess the risk of HGD and cancer in patients affected by IPMN (<xref ref-type="bibr" rid="B18">18</xref>&#x2013;<xref ref-type="bibr" rid="B21">21</xref>), such as the International Consensus Guidelines (ICG) published in 2012, in which predictors of malignancy were categorized as high risk stigmata and worrisome features (<xref ref-type="bibr" rid="B18">18</xref>). However, the predicting model still does not identify the degree of malignancy in patients with IPMN.</p>
<p>Although HGD is not malignant, HGD-IPMN has been shown to exhibit an increased risk of subsequent development of pancreatic cancer in a few studies. Therefore, HGD and I-IPMC were studied together in various guidelines (<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B18">18</xref>&#x2013;<xref ref-type="bibr" rid="B24">24</xref>). However, the median overall survival for patients who underwent pancreatic resection for IPMN with HGD was similar to the survival of patients with LGD, and superior to that of patients with IPMN-associated PDAC (<xref ref-type="bibr" rid="B22">22</xref>). Thus, early recognition of HGD is important to improve prognosis of the disease.</p>
<p>The recent consensus is that the malignant potential of IPMN is dependent on the presence and extent of invasive cancer (<xref ref-type="bibr" rid="B24">24</xref>&#x2013;<xref ref-type="bibr" rid="B30">30</xref>). However, I-IPMC categorized by the Armed Forces Institute of Pathology (AFIP) and WHO classifications covers cancer with variable biological behaviors, with the 5-year survival rate varying substantially between 36% and 90% (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B24">24</xref>&#x2013;<xref ref-type="bibr" rid="B30">30</xref>). This may be due to the heterogeneity of I-IPMC, including biological behavior and an invasive component of various sizes. Invasion of &#x2264; 0.5 cm presents with excellent prognosis whereas the prognosis for IPMN at an advanced stage of invasion is as poor as that of conventional PDAC (<xref ref-type="bibr" rid="B2">2</xref>). In addition, no LN metastasis was observed in patients with early stage invasion &#x2264; 5 mm (<xref ref-type="bibr" rid="B31">31</xref>, <xref ref-type="bibr" rid="B32">32</xref>). Thus, it would be more appropriate to stage invasive carcinomas with conventional staging protocols according to WHO (2019) and then further substage the pT1 category (early invasion &#x2264; 2 cm) into pT1a for those with an invasive component &#x2264; 5 mm (<xref ref-type="bibr" rid="B2">2</xref>). This is important for the early detection of pancreatic cancer.</p>
<p>HGD and pT1a are considered as the early stage of malignant IPMN. The ability to distinguish HGD or pT1a IPMN from LGD IPMN will help physicians treat IPMN patients in which it is difficult to identify by clinical and radiological characteristics, allowing for clear surgical indications and the ability to cure pancreatic cancer at an embryonic stage. Many reports have attempted to identify predictive factors for HGD and I-IPMC that might influence the management of IPMN patients by logistic regression analysis and nomogram (<xref ref-type="bibr" rid="B10">10</xref>, <xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B17">17</xref>, <xref ref-type="bibr" rid="B31">31</xref>, <xref ref-type="bibr" rid="B32">32</xref>). However, there have been no reports of a subdivided model to predict HGD/pT1a in patients with IPMN that could be widely applied in clinical practice. Therefore, it is necessary to find a simple and objective method to discriminate LGD or HGD/pT1a IPMN and advanced IPMC accurately based on clinical and radiological data.</p>
<p>Decision tree classification algorithms are an inductive learning method that can produce a tree-type classification model from given training samples. Each non-leaf node in the tree shows which feature is used to judge the category, and each leaf node represents the final category. The root node to each leaf node forms a path for classification.</p>
<p>Model interpretation is often essential to illustrate a machine learning model, especially in medical research. The factors which have strong significance in a classification or regression model can help medical workers attach importance to certain factors. An intuitive interpretation of a model can be easily understood. Scott ML et&#xa0;al. developed the method of calculating the <italic>SHAP value</italic> for interpretation of these models (<xref ref-type="bibr" rid="B33">33</xref>). The significance is illustrated by the absolute SHAP value; larger values have stronger significance.</p>
<p>Ensemble learning is a common method in machine learning. While learning, multiple models or classifiers are produced independently and ensembled into a final prediction model. The ensemble model usually performs better than any independent prediction model. The random forest algorithm is a combination of bagging and decision tree. Each tree is produced by part of the training sample and features. The final random forest model ensembles the decision trees by voting. Therefore, the random forest model has a higher accuracy.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<title>Methods</title>
<sec id="s2_1">
<title>Patients</title>
<p>Between December 2008 and October 2018, 372 consecutive patients underwent surgical resection for pathologically confirmed IPMN of the pancreas at Ruijin Hospital, Shanghai Jiaotong University School of Medicine were included. A total of 63 patients were excluded from the study because they had a histological diagnosis concomitant with PDAC (n = 41) or some essential preoperative examinations were not performed before surgery (n = 22). Finally, a total of 309 patients were included in the study. The patients&#x2019; demographic information, clinicopathological features, and imaging findings were retrieved and systematically entered into a Microsoft Excel spreadsheet. The study was approved by the ethics committee of Ruijin Hospital, Shanghai Jiaotong University School of Medicine.</p>
</sec>
<sec id="s2_2">
<title>Preoperative examinations</title>
<p>All patients underwent clinical evaluation, laboratory testing, including serum tumor marker levels (carcinoembryonic antigen [CEA] and carbohydrate antigen 19-9 [CA19-9], carbohydrate antigen 125 [CA125], and alpha-fetoprotein [AFP]), pancreatic magnetic resonance imaging (MRI)/MRCP, and computed tomography (CT) before surgery. The morphological type, maximum branch duct cyst size, main pancreatic duct (MPD) diameter, mural nodule size, and internal septations were determined by pancreatic MRI/MRCP. In addition, among the patients who had multifocal pancreatic cystic lesions (two or more), only the largest cyst was measured according to the methods in this study. When there is suspicion of malignant IPMN, assessment of vascular involvement, peritoneal, or metastatic disease were determined by CT. Lesion edge is defined as the radiographic boundary between the lesion and surrounding pancreas whether the edge is clear (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1</bold>
</xref>, <xref ref-type="fig" rid="f2">
<bold>2</bold>
</xref>) (<xref ref-type="bibr" rid="B34">34</xref>). Alternative imaging modalities such as endoscopic ultrasound(EUS) and endoscopic retrograde cholangiopancreatography (ERCP) are increasingly being used in the diagnosis of IPMN, but these adjunct diagnostic techniques were not included in this cohort, as data were only available for some of the patients. If surgery is considered, endoscopic ultrasonography-guided fine needle aspiration and biopsy are not routinely performed because of concerns about the possibility of seeding tumor cells along the needle track and high risk of adverse events (intracystic bleeding, acute pancreatitis , fever/infection, et&#xa0;al) (<xref ref-type="bibr" rid="B35">35</xref>&#x2013;<xref ref-type="bibr" rid="B38">38</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>This patient was histologically diagnosed with BD-IPMN. CT with sharp margins of a cystic lesion (blue arrow) in the head of the pancreas.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1087852-g001.tif"/>
</fig>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>This patient was histologically diagnosed with malignant MT-IPMN. CT with unsharp margins of a cystic lesion (blue arrow) in the uncinate process of the pancreas.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1087852-g002.tif"/>
</fig>
<p>Based on preoperative imaging analyses, we classified tumors as main duct (MD), branch duct (BD), or mixed type (MT) IPMN. MD-IPMN was defined as segmental or diffuse dilation of the MPD (&gt; 5 mm). Branch duct IPMN was defined as pancreatic cysts of &gt; 5 mm in diameter that communicate with the MPD, and MT-IPMN patients meet the criteria for both MD-IPMN and BD-IPMN (<xref ref-type="bibr" rid="B18">18</xref>). The locations of lesions, according to anatomical characteristics, included the pancreatic head and/or uncinate process, pancreatic neck, pancreatic body, pancreatic tail, and diffuse (when the lesions involved more than one segment of the anatomical location) (<xref ref-type="bibr" rid="B39">39</xref>). Common bile duct (CBD) dilatation was defined as dilation greater than 7 mm in patients younger than 60 years, 9 mm in patients older than 60 years, and 10 mm in patients who had undergone a cholecystectomy, with the exception of CBD stones (<xref ref-type="bibr" rid="B39">39</xref>, <xref ref-type="bibr" rid="B40">40</xref>).</p>
</sec>
<sec id="s2_3">
<title>Surgical indications</title>
<p>Surgery was performed in the patients with IPMN who met at least one of the following criteria: (1) presence of symptom (jaundice, abdominal pain, back pain, weight loss); (2) MD-IPMN (<xref ref-type="bibr" rid="B18">18</xref>, <xref ref-type="bibr" rid="B19">19</xref>); (3) MT-IPMN with a MPD diameter of &gt; 7 mm (<xref ref-type="bibr" rid="B41">41</xref>); (4) gradual increase in the BD cyst size (total growth &#x2265;10 mm) during follow-up (<xref ref-type="bibr" rid="B42">42</xref>); (5) BD or MT IPMN with contrast-enhancing mural nodules size greater than 5 mm (<xref ref-type="bibr" rid="B43">43</xref>); and (6) histologically proven invasive IPMN based on EUS-guided biopsy.</p>
</sec>
<sec id="s2_4">
<title>Pathological diagnosis</title>
<p>Pancreatic specimens were serially sectioned at 5-mm intervals, and whole slides were reviewed and graded by a specialized pathologist blinded to clinical outcomes. The grades were LGD, HGD, or I-IPMC, based on the degree of cyto-architectural dysplasia in accordance with the WHO classification system (<xref ref-type="bibr" rid="B2">2</xref>). When more than one pathologic type was present in the same patient, the highest degree of dysplasia was recorded. I-IPMC was defined as the presence of a continuous invasive component from HGD in pathological findings to distinguish it from PDAC concomitant with IPMN. I-IPMC tumors were staged according to the Tumor, Node, and Metastasis Classification of Malignant Tumors published by the International Union against Cancer (<xref ref-type="bibr" rid="B44">44</xref>), and thereafter the substage of the T1 category of I-IPMC was classified as T1a (invasive component &#x2264; 5 mm), T1b (invasive component &gt; 5 mm and &#x2264; 10 mm), or T1c (invasive component &gt; 10 mm and &#x2264; 20 mm), according to the revised ICG in 2012 and the 2019 WHO classification system (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B18">18</xref>). The type of I-IPMC was classified as tubular or colloid based on differentiation of the invasive components (<xref ref-type="bibr" rid="B18">18</xref>).</p>
</sec>
<sec id="s2_5">
<title>Follow-up</title>
<p>In general, patients with I-IPMC and non-invasive IPMN were followed for recurrence or progression every 3&#x2013;6 or 6&#x2013;12 months, respectively, with imaging studies that included at least one of the following: CT scan, MRI, or EUS. Survival time was calculated from the time of surgical resection to death, or the end of follow-up (December 2018), whichever came first. Censoring occurred for patients who were still alive or who died as a result of other reasons at the last follow-up.</p>
</sec>
<sec id="s2_6">
<title>Statistical analysis</title>
<p>To perform model development and testing independently, the cohort was randomly divided into a model development (MD) set and a test set (2:1) in each random seed. Categorical variables are expressed in frequencies and percentages (%) and comparison of ratios was tested by chi-square test. Continuous variables were expressed as mean &#xb1; standard deviation (SD) or median and range depending on data contribution. Continuous variables were compared using the Mann-Whitney U-test or paired Student <italic>t-</italic>test. Postoperative overall survival rates were calculated using the Kaplan&#x2013;Meier method. Bonferroni&#x2019;s correction was used for pairwise comparisons.</p>
<p>For the tree-type model in our study, we calculate the SHAP value of a trained model given certain pairs of input and output. In particular, the categorical features are all transferred into one hot vector and are concatenated with numerical features. To show the components of each one hot vector, we add numbers at the end of the features for each category. We use the Python package SHAP for calculation, and show the top factors that have the largest absolute SHAP value. Python 3.7 and the function TreeExplainer in SHAP 0.38.1 were used.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>Results</title>
<sec id="s3_1">
<title>Patient characteristics</title>
<p>A total of 372 patients underwent pancreatic surgical resection for IPMN. Sixty-three patients were excluded from the study because they had a histological diagnosis concomitant with PDAC (n = 41) or some essential preoperative examinations were not performed before surgery (n = 22). Finally, a total of 309 patients were included in the study. Demographic information, clinicopathological features, and imaging findings of the 309 patients are shown in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>. No one patient had undergone neoadjuvant chemotherapy prior to operation. Their median (range) age was 62 (27&#x2013;84) years, and 170 patients (55.0%) were male. With regard to radiographic morphological types, 167 patients (54.0%) had BD-IPMN, 38 (12.3%) had MD-IPMN, and 104 (33.7%) had MT-IPMN. Total pancreatectomy was performed in 16 (5.2%) patients, pancreatic duodenectomy in 167 (54.0%) patients, distal pancreatectomy in 75 (24.3%) patients, and central pancreatectomy in 51 (16.5%) patients. Final pathological diagnosis showed that 206 (66.7%) patients had LGD, 19 (6.1%) patients had HGD, 35 (11.3%) patients had pT1a IPMC, and 49 (15.9%) patients had I-IPMC beyond pT1a. Among 84 patients with I-IPMC, 18 (21.4%) patients had LN metastasis. No LN metastasis was observed in the pT1a IPMC group.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Clinical characteristics of patients between the training set and testing set.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left"/>
<th valign="middle" align="center">Total</th>
<th valign="middle" align="center">Training set</th>
<th valign="middle" align="center">Testing set</th>
<th valign="middle" align="center" colspan="2"/>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left"/>
<td valign="middle" align="center">n=309</td>
<td valign="middle" align="center">n=210</td>
<td valign="middle" align="center">n=99</td>
<td valign="middle" align="center">X2</td>
<td valign="middle" align="center">P value</td>
</tr>
<tr>
<td valign="middle" align="left">Sex</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">0.129</td>
<td valign="middle" align="center">0.806</td>
</tr>
<tr>
<td valign="middle" align="left">Male</td>
<td valign="middle" align="center">170 (55%)</td>
<td valign="middle" align="center">117 (55.7%)</td>
<td valign="middle" align="center">53 (53.5%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Female</td>
<td valign="middle" align="center">139 (45%)</td>
<td valign="middle" align="center">93 (44.3%)</td>
<td valign="middle" align="center">46 (46.5%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">Age (mean&#xb1;SD)</td>
<td valign="middle" align="center">61.80&#xb1;<break/>8.64 (84,27)</td>
<td valign="middle" align="center">61.37&#xb1;8.35 (84,27)</td>
<td valign="middle" align="center">62.72&#xb1;<break/>9.20 (81,30)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center">0.202</td>
</tr>
<tr>
<td valign="middle" align="left">Tumor location</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">5.374</td>
<td valign="middle" align="center">0.071</td>
</tr>
<tr>
<td valign="middle" align="left">Head of pancreas</td>
<td valign="middle" align="center">164 (53.1%)</td>
<td valign="middle" align="center">118 (56.2%)</td>
<td valign="middle" align="center">46 (46.5%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Body and tail of pancreas</td>
<td valign="middle" align="center">97 (31.4%)</td>
<td valign="middle" align="center">66 (31.4%)</td>
<td valign="middle" align="center">31 (31.3%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Grade of differentiation</td>
<td valign="middle" align="center">48 (15.5%)</td>
<td valign="middle" align="center">26 (12.4%)</td>
<td valign="middle" align="center">22 (22.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<th valign="middle" colspan="6" align="left">Pathological diagnosis</th>
</tr>
<tr>
<td valign="middle" align="left">IPMN and Low-grade</td>
<td valign="middle" align="center">206 (66.7%)</td>
<td valign="middle" align="center">139 (66.2%)</td>
<td valign="middle" align="center">67 (67.7%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">High-grade dysplasia</td>
<td valign="middle" align="center">19 (6.1%)</td>
<td valign="middle" align="center">13 (6.2%)</td>
<td valign="middle" align="center">6 (6.1%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">pT1a IPMC</td>
<td valign="middle" align="center">35 (11.3%)</td>
<td valign="middle" align="center">24 (11.4%)</td>
<td valign="middle" align="center">11 (11.1%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Tubular</td>
<td valign="middle" align="center">26</td>
<td valign="middle" align="center">17</td>
<td valign="middle" align="center">9</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Colloid</td>
<td valign="middle" align="center">9</td>
<td valign="middle" align="center">7</td>
<td valign="middle" align="center">2</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Invasion beyond pT1a IPMC</td>
<td valign="middle" align="center">49 (15.9%)</td>
<td valign="middle" align="center">34 (16.2%)</td>
<td valign="middle" align="center">15 (15.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Tubular</td>
<td valign="middle" align="center">38</td>
<td valign="middle" align="center">25</td>
<td valign="middle" align="center">13</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Colloid</td>
<td valign="middle" align="center">11</td>
<td valign="middle" align="center">9</td>
<td valign="middle" align="center">2</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<th valign="middle" colspan="6" align="left">T stage <sup>a</sup>
</th>
</tr>
<tr>
<td valign="middle" align="left">T1a</td>
<td valign="middle" align="center">35 (41.7%)</td>
<td valign="middle" align="center">24 (41.4%)</td>
<td valign="middle" align="center">11 (42.3%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">T1b</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">T1c</td>
<td valign="middle" align="center">9 (10.7%)</td>
<td valign="middle" align="center">4 (6.9%)</td>
<td valign="middle" align="center">5 (19.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">T2</td>
<td valign="middle" align="center">24 (28.6%)</td>
<td valign="middle" align="center">19 (32.8%)</td>
<td valign="middle" align="center">5 (19.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">T3</td>
<td valign="middle" align="center">16 (19.0%)</td>
<td valign="middle" align="center">11 (19.0%)</td>
<td valign="middle" align="center">5 (19.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">T4</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">N stage, N1<sup>b</sup>
</td>
<td valign="middle" align="center">18 (21.4%)</td>
<td valign="middle" align="center">12 (20.7%)</td>
<td valign="middle" align="center">6 (23.1%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">M stage, M1</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center">0 (0%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<th valign="middle" colspan="6" align="left">UICC stage <sup>c</sup>
</th>
</tr>
<tr>
<td valign="middle" align="left">IA</td>
<td valign="middle" align="center">42 (50%)</td>
<td valign="middle" align="center">27 (46.6%)</td>
<td valign="middle" align="center">15 (57.7%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">IB</td>
<td valign="middle" align="center">12 (14.3%)</td>
<td valign="middle" align="center">11 (19.0%)</td>
<td valign="middle" align="center">1 (3.8%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">IIA</td>
<td valign="middle" align="center">12 (14.3%)</td>
<td valign="middle" align="center">8 (13.8%)</td>
<td valign="middle" align="center">4 (15.4%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">IIB</td>
<td valign="middle" align="center">18 (21.4%)</td>
<td valign="middle" align="center">12 (20.7%)</td>
<td valign="middle" align="center">6 (23.1%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">III</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">IV</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center">0</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Morphological types on imaging findings</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">0.415</td>
<td valign="middle" align="center">0.855</td>
</tr>
<tr>
<td valign="middle" align="left">Branch duct</td>
<td valign="middle" align="center">167 (54%)</td>
<td valign="middle" align="center">111 (52.9%)</td>
<td valign="middle" align="center">56 (56.6%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Main duct</td>
<td valign="middle" align="center">38 (12.3%)</td>
<td valign="middle" align="center">27 (12.9%)</td>
<td valign="middle" align="center">11 (11.1%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Mixed</td>
<td valign="middle" align="center">104 (33.7%)</td>
<td valign="middle" align="center">72 (34.3%)</td>
<td valign="middle" align="center">32 (32.3%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Surgical procedures</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">4.477</td>
<td valign="middle" align="center">0.215</td>
</tr>
<tr>
<td valign="top" align="left">Total pancreatectomy</td>
<td valign="top" align="center">16 (5.2%)</td>
<td valign="top" align="center">8 (3.8%)</td>
<td valign="top" align="center">8 (8.1%)</td>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Pancreaticoduodenectomy</td>
<td valign="middle" align="center">167 (54%)</td>
<td valign="middle" align="center">117 (55.7%)</td>
<td valign="middle" align="center">50 (50.5%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Distal pancreatectomy</td>
<td valign="middle" align="center">75 (24.3%)</td>
<td valign="middle" align="center">54 (25.7%)</td>
<td valign="middle" align="center">21 (21.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Central pancreatectomy</td>
<td valign="middle" align="center">51 (16.5%)</td>
<td valign="middle" align="center">31 (14.8%)</td>
<td valign="middle" align="center">20 (20.2%)</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="fnT1_1">
<label>a</label>
<p>T stage indicates the depth of the invasive component. T1a was defined as a depth of 5 mm; T1b as &gt; 5 mm and &lt;10 mm; and T1c as &#x2265; 10 mm and &#x2264; 20 mm.</p>
</fn>
<fn id="fnT1_2">
<label>b</label>
<p>No lymph node metastasis in the pT1a IPMC group.</p>
</fn>
<fn id="fnT1_3">
<label>c</label>
<p>The pathological stage was determined by the 7<sup>th</sup> edition of the Tumor, Node, and Metastasis.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s3_2">
<title>Training and testing subgroups</title>
<p>The training and testing sets contained 210 (68%) and 99 (32%) patients, respectively. No clinical or pathological variables were statistically different between the training and test sets, suggesting similarity in the cohorts. Complete demographic and pathological results stratified by training and testing subgroups can be found in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>.</p>
</sec>
<sec id="s3_3">
<title>Postoperative survival in the training subgroup</title>
<p>In the training set, 41 (13%) patients died with a median follow-up time of 99 months (IQR, 2&#x2013;120). The estimated overall 5-year survival rate was 95.1% for patients with IPMN with LGD, 61.5% for patients with HGD, 55.0% for patients with pT1a, and 40.6% for patients with I-IPMC beyond pT1a. There was no difference in median OS between HGD IPMN and pT1a IPMC (65.39 vs. 68.62 months, P = 0.178) (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>). So, HGD and pT1a were integrated into the HGD/pT1a group for analysis. When the median OS of HGD/pT1a IPMN was compared with that of LGD IPMN, there was a marked significant difference (71.55 vs. 108.87 months, P = 0.000,). There was also a marked significant difference when the median OS of HGD/pT1a IPMN was compared with that of I-IPMC beyond pT1a (71.55 vs. 50.57 months, P = 0.005) (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3B</bold>
</xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>
<bold>(A)</bold>. Kaplan&#x2013;Meier survival estimates of patients with LGD, HGD, pT1a, or I-IPMC beyond the pT1a group undergoing surgical resection of IPMN (Graph 1). <bold>(B)</bold>. Kaplan&#x2013;Meier survival estimates of patients with LGD, HGD/pT1a, or I-IPMC beyond the pT1a group undergoing surgical resection of IPMN (Graph 2). <bold>(C)</bold>. Confusion matrix of the decision tree model <bold>(A)</bold> and the random forest model <bold>(B)</bold> on the testing set. The confusion matrix of on the testing set.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1087852-g003.tif"/>
</fig>
</sec>
<sec id="s3_4">
<title>Factors associated with subtypes of IPMN in the training set in univariate analyses</title>
<p>The variables included in the univariate analysis are shown in <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>. For IPMN, HGD, pT1a, and invasive malignancy beyond pT1a were more prevalent in patients who presented with mixed type, presence of mural nodules, MPD, and common bile duct dilatation than LGD IPMN whereas LGD IPMN was more common with branch duct type (P &lt; 0.05). I-IPMC beyond the pT1a group was significantly more prevalent when presented with concomitant new-onset diabetes mellitus (DM), unclear focus boundary, elevated serum CA19-9, and obstructive jaundice as compared with LGD, HGD, and pT1a IPMN groups for which there was no statistical difference among LGD, HGD and pT1a IPMN groups. Our study showed no significant differences in all variables between patients with HGD IPMN and pT1a IPMC, except for distal pancreatic atrophy which was more common in pT1a IPMC.</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Univariate analysis of preoperative (clinical or radiological) findings associated with subtypes of IPMNs in the training set.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">Pathological Diagnosis</th>
<th valign="middle" align="center">(1)Patients With LGD IPMN (n=139)</th>
<th valign="middle" align="center">(2)Patients With HGD IPMN (n=13)</th>
<th valign="middle" align="center">(3) Patients With p1Ta IPMN (n=24)</th>
<th valign="middle" align="center">(4)Patients With I-IPMC beyond pT1a (n=34)</th>
<th valign="middle" align="center">P Value</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">Mean age (range), yrs</td>
<td valign="middle" align="center">60.3 (80,27)a</td>
<td valign="middle" align="center">66.0 (70,56)</td>
<td valign="middle" align="center">64.5 (76,41)</td>
<td valign="middle" align="center">65.3 (84,53)a</td>
<td valign="middle" align="center">0.014</td>
</tr>
<tr>
<td valign="middle" align="left">Male %</td>
<td valign="middle" align="center">80 (57.6%)</td>
<td valign="middle" align="center">5 (38.5%)</td>
<td valign="middle" align="center">16 (66.7%)</td>
<td valign="middle" align="center">16 (47.1%)</td>
<td valign="middle" align="center">0.266</td>
</tr>
<tr>
<td valign="middle" align="left">BMI,kg/m2 (range)</td>
<td valign="middle" align="center">22.3 (30.0,14.4)</td>
<td valign="middle" align="center">21.3 (24.6,17.3)</td>
<td valign="middle" align="center">21.8 (26.3,16.4)</td>
<td valign="middle" align="center">21.6 (27.2,15.2)</td>
<td valign="middle" align="center">0.466</td>
</tr>
<tr>
<td valign="middle" align="left">Initial symptoms</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">0.01</td>
</tr>
<tr>
<td valign="middle" align="left">Jaundice</td>
<td valign="middle" align="center">2 (1.4%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">2 (5.9%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Weight loss</td>
<td valign="middle" align="center">5 (3.6%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">3 (12.5%)</td>
<td valign="middle" align="center">2 (5.9%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Abdominal pain</td>
<td valign="middle" align="center">69 (49.6%)</td>
<td valign="middle" align="center">10 (76.9%)d</td>
<td valign="middle" align="center">9 (37.5%)d</td>
<td valign="middle" align="center">20 (58.8%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Back pain</td>
<td valign="middle" align="center">4 (2.9%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">3 (12.5%)</td>
<td valign="middle" align="center">4 (11.8%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">No chief complaints</td>
<td valign="middle" align="center">59 (42.4%)a</td>
<td valign="middle" align="center">3 (23.1%)</td>
<td valign="middle" align="center">11 (45.8%)</td>
<td valign="middle" align="center">6 (17.6%)a</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Duration of symptoms, months</td>
<td valign="middle" align="center">10.8 (120,0.1)</td>
<td valign="middle" align="center">8.8 (60.0,0.3)</td>
<td valign="middle" align="center">4.9 (30,0.3)</td>
<td valign="middle" align="center">3.7 (24,0.3)</td>
<td valign="middle" align="center">0.11</td>
</tr>
<tr>
<td valign="middle" align="left">Family history of pancreatic<break/>cancer</td>
<td valign="middle" align="center">6 (4.3%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">1 (4.2%)</td>
<td valign="middle" align="center">1 (2.9%)</td>
<td valign="middle" align="center">0.875</td>
</tr>
<tr>
<td valign="middle" align="left">Diabetes</td>
<td valign="middle" align="center">37 (26.6%)a</td>
<td valign="middle" align="center">2 (15.4%)</td>
<td valign="middle" align="center">8 (33.4%)</td>
<td valign="middle" align="center">18 (53.0%)a</td>
<td valign="middle" align="center">0.005</td>
</tr>
<tr>
<td valign="middle" align="left">New-onset DM</td>
<td valign="middle" align="center">23 (16.5%)a</td>
<td valign="middle" align="center">1 (7.7%)</td>
<td valign="middle" align="center">4 (16.7%)</td>
<td valign="middle" align="center">16 (47.1%)a</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Long-standing DM</td>
<td valign="middle" align="center">14 (10.1%)</td>
<td valign="middle" align="center">1 (7.7%)</td>
<td valign="middle" align="center">4 (16.7%)</td>
<td valign="middle" align="center">2 (5.9%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">HBV</td>
<td valign="middle" align="center">14 (10.1%)</td>
<td valign="middle" align="center">2 (5.4%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">3 (8.8%)</td>
<td valign="middle" align="center">0.362</td>
</tr>
<tr>
<td valign="middle" align="left">Acute pancreatitis</td>
<td valign="middle" align="center">22 (15.8%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">5 (20.8%)</td>
<td valign="middle" align="center">6 (18.2%)</td>
<td valign="middle" align="center">0.386</td>
</tr>
<tr>
<td valign="middle" align="left">tumor location</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">0.003</td>
</tr>
<tr>
<td valign="middle" align="left">Non diffuse</td>
<td valign="middle" align="center">128 (92.1%)</td>
<td valign="middle" align="center">12 (92.3%)</td>
<td valign="middle" align="center">15 (62.5%)</td>
<td valign="middle" align="center">29 (85.3%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Head</td>
<td valign="middle" align="center">78 (56.1%)</td>
<td valign="middle" align="center">7 (53.8%)</td>
<td valign="middle" align="center">11 (45.8%)</td>
<td valign="middle" align="center">22 (64.7%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Body/tail</td>
<td valign="middle" align="center">50 (36.0%)</td>
<td valign="middle" align="center">5 (38.5%)</td>
<td valign="middle" align="center">4 (16.7%)</td>
<td valign="middle" align="center">7 (20.6%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Diffuse</td>
<td valign="middle" align="center">11 (7.9%)a</td>
<td valign="middle" align="center">1 (7.7%)</td>
<td valign="middle" align="center">9 (37.5%)</td>
<td valign="middle" align="center">5 (14.7%)a</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Morphological types on imaging findings</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Main duct/Mixed</td>
<td valign="middle" align="center">45 (32.4%)</td>
<td valign="middle" align="center">11 (84.6%)</td>
<td valign="middle" align="center">21 (87.5%)</td>
<td valign="middle" align="center">22 (64.7%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Main duct</td>
<td valign="middle" align="center">14 (10.1%)</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">5 (20.8%)</td>
<td valign="middle" align="center">8 (23.5%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Mixed</td>
<td valign="middle" align="center">31 (22.3%)bf</td>
<td valign="middle" align="center">11 (84.6%)f</td>
<td valign="middle" align="center">16 (66.7%)b</td>
<td valign="middle" align="center">14 (41.2%)</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Branch duct</td>
<td valign="middle" align="center">94 (67.6%)abf</td>
<td valign="middle" align="center">2 (15.4%)f</td>
<td valign="middle" align="center">3 (12.5%)b</td>
<td valign="middle" align="center">12 (35.3%)a</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">Maximum size, median<break/> (range), cm</td>
<td valign="middle" align="center">2.8 (19.6,1.0)b</td>
<td valign="middle" align="center">3.6 (5.8,0.7)</td>
<td valign="middle" align="center">4.0 (8.5,1.2)b</td>
<td valign="middle" align="center">3.2 (8.8,1.73)</td>
<td valign="middle" align="center">0.027</td>
</tr>
<tr>
<td valign="middle" align="left">Presence of mural<break/>nodule, %</td>
<td valign="middle" align="center">32 ( 23.0%)abf</td>
<td valign="middle" align="center">10 (76.9%)f</td>
<td valign="middle" align="center">21 (87.5%)b</td>
<td valign="middle" align="center">30 (88.2%)a</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Maximum size of<break/>mural nodule, median<break/> (range), mm</td>
<td valign="middle" align="center">2.0 (4.3,0.0)abf</td>
<td valign="middle" align="center">0.9 (1.9,0.0)cf</td>
<td valign="middle" align="center">1.1 (3.5,0.0)be</td>
<td valign="middle" align="center">1.6 (4.5,0.0)ace</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Lesion edge Clear,%</td>
<td valign="middle" align="center">120 (86.3%) ab</td>
<td valign="middle" align="center">10 (76.9%)c</td>
<td valign="middle" align="center">11 (45.8%)b</td>
<td valign="middle" align="center">5 (14.7%)ac</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Maximum diameter of main pancreatic duct, median (range), cm</td>
<td valign="middle" align="center">0.4 (2.9,0.1)abf</td>
<td valign="middle" align="center">1.1 (4.3,0.4)f</td>
<td valign="middle" align="center">1.3 (3.9,0.5)be</td>
<td valign="middle" align="center">0.84 (3.0,0.2)ae</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">CBD dilatation,%</td>
<td valign="middle" align="center">1 (0.7%) ab</td>
<td valign="middle" align="center">1 (7.7%)c</td>
<td valign="middle" align="center">9 (37.5%)b</td>
<td valign="middle" align="center">17 (50%)ac</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Distal pancreatic atrophy,%</td>
<td valign="middle" align="center">25 (18.0%)ab</td>
<td valign="middle" align="center">4 (30.8%)d</td>
<td valign="middle" align="center">20 (83.3%)bd</td>
<td valign="middle" align="center">22 (64.7%)a</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Serum CA19-9, U/mL</td>
<td valign="middle" align="center">28.0 (1141.9,0.2)a</td>
<td valign="middle" align="center">20.3 (136.0,3.3)c</td>
<td valign="middle" align="center">63.6 (460.4,5.0)e</td>
<td valign="middle" align="center">348.8 (4446.2,1.1)ace</td>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Serum CEA, ng/Ml</td>
<td valign="middle" align="center">2.6 (17.1,0.6)a</td>
<td valign="middle" align="center">4.2 (20.4,1.0)</td>
<td valign="middle" align="center">4.8 (15.9,0.7)</td>
<td valign="middle" align="center">7.4 (96.0,1.2)a</td>
<td valign="middle" align="center">0.006</td>
</tr>
<tr>
<td valign="middle" align="left">Serum CA125, U/mL</td>
<td valign="middle" align="center">10.3 (62.8,2.0)a</td>
<td valign="middle" align="center">16.8 (70.6,7.7)</td>
<td valign="middle" align="center">14.9 (41.1,4.2)</td>
<td valign="middle" align="center">21.2 (269.9,4.4)a</td>
<td valign="middle" align="center">0.029</td>
</tr>
<tr>
<td valign="middle" align="left">Serum AFP, ng/mL</td>
<td valign="middle" align="center">3.5 (41.9,0.8)</td>
<td valign="middle" align="center">3.4 (6,1.2)</td>
<td valign="middle" align="center">3.2 (7.9,1.2)</td>
<td valign="middle" align="center">3.3 (24.0,1.0)</td>
<td valign="middle" align="center">0.963</td>
</tr>
<tr>
<td valign="middle" align="left">Liver function</td>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center"/>
<td valign="middle" align="center">&lt;0.001</td>
</tr>
<tr>
<td valign="middle" align="left">Obstructive jaundice</td>
<td valign="middle" align="center">1 (0.7%)a</td>
<td valign="middle" align="center">0 (0.0%)</td>
<td valign="middle" align="center">2 (14.3%)</td>
<td valign="middle" align="center">11 (32.4%)a</td>
<td valign="middle" align="center"/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Categorical values are expressed as percentages, and P values calculated with Chi square analysis. Continuous variables are shown as median and interquartile ranges and compared with ANOVA. P-values denote comparisons among the four groups. ab and cdef signify P &lt; 0.05 for pairwise comparisons. a:1-4, b:1-3, c:2-4, d:2-3, e:3-4, and f:1-2.</p>
</fn>
<fn>
<p>BMI, body mass index; DM, diabetes mellitus; HBV, hepatitis B virus; CBD, common bile duct; CA19-9, carbohydrate antigen 19-9; CEA, carcinoembryonic antigen; CA125, carbohydrate antigen 125; AFP, alpha-fetoprotein; LGD, low grade dysplasia; HGD, high grade dysplasia; p1Ta, invasive component &#x2264; 5 mm; IPMN, intraductal papillary mucinous neoplasm; I-IPMC, invasive intraductal papillary mucinous carcinoma; NA, not applicable.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s3_5">
<title>The 3-class classification results of training and testing sets including LGD, HGD/pT1a IPMN and IPMC beyond pT1a</title>
<p>In the decision tree model, we used cross entropy as the information gain and set the maximum depth of the tree as 5. In the training set, an accuracy of 92.4% was reported (194 of 210 correct), and with the testing set, an accuracy of 86.9% (86 of 99 correct). The confusion matrix of the decision tree model on the testing set is shown in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3C</bold>
</xref>. On the decision tree model, we have made an internal validation on our own dataset by a 10-fold cross validation experiment, and an average accuracy of 78.1% is reported.</p>
<p>In the random forest model, we used cross entropy as the information gain and set the number of trees as 30, and the random features chosen for each tree is set as the square root of the total number of features. The random forest model has an accuracy of 99.5% (209 of 210 correct) and 96.0% with the testing set (95 of 99 correct). The confusion matrix of the random forest model on the testing set is also shown in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3C</bold>
</xref>. An internal cross validation is also conducted on the random forest model, and the average accuracy is 90.6%.</p>
<p>The decision tree model has strong interpretation; our trained decision tree model is shown in <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>. The nodes at the top part of the trees, as the mural nodule size, CBD dilation, and serum CA19-9 levels, were the most important factors of the model. For interpretability of the random forest model with respect to the input factors, we used the estimated SHAP value, which is shown in <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>. The blue, green, and pink bars represent the mean |SHAP value| for the classes LGD IPMN, HGD/pT1a IPMN, and I-IPMC beyond pT1a, respectively. Longer bars imply stronger significance, and only the top 15 factors in order are shown. Among them, the mural nodule size, MPD diameter, serum CA19-9 levels, lesion edge clear, and CBD dilation were the most important factors that influenced the classification results in the interpretation of the random forest model. There were some discrepancies in the range of the importance of factors for the random forest model between the decision tree model, which a higher accuracy indicated a more comprehensive interpretation than a single decision tree.</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Illustration of the decision tree model.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1087852-g004.tif"/>
</fig>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Illustration of the interpretation model of the decision tree. The bar lengths represent the mean |SHAP value|, which shows the significance of a single factor in the classification model. Different colors show the significance of different classes, where the blue, green, and pink bars represent the mean |SHAP value| for the categories LGD IPMN, HGD/pT1a IPMN, and I-IPMC beyond pT1a, respectively.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-13-1087852-g005.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<title>Discussion</title>
<p>The current consensus regarding the malignant potential of IPMN is that its aggressiveness is dependent on the presence of invasive cancer, the extent of cancer invasion, and the biological characteristics of cancer cells (<xref ref-type="bibr" rid="B24">24</xref>&#x2013;<xref ref-type="bibr" rid="B30">30</xref>). These findings suggest that the therapeutic strategy for IPMN should differ according to the grade. Therefore, it is becoming more important to accurately categorize IPMN preoperatively into its corresponding pathological subtypes. Previous studies have focused on I-IPMC, but did not focus on the early stage of malignant IPMN. However, in the clinic, such patients are the most difficult to identify in time, and if identified earlier, the prognosis of patients will be greatly improved. In our study, HGD IPMN shows similar optimistic postoperative outcome to pT1a IPMC, whereas I-IPMC beyond pT1a has a poorer outcome compared with HGD/pT1a IPMN. The postoperative survival and 5-year survival rate of IPMN were nearly consistent with previous reports (<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B45">45</xref>). Moreover, there were no significant differences between most variables between HGD IPMN and pT1a IPMC in the present study. Therefore, we believe that pT1a and HGD behave similarly and both have excellent prognoses; thus, we integrated both pT1a and HGD into HGD/pT1a IPMN in the present study. However, performing grade classification preoperatively is generally difficult, and preoperative discrimination between IPMN with HGD/pT1a and LGD is nearly impossible. Several predictive factors for malignant IPMN have been reported, including dilated branch (30 mm), MPD dilatation, the presence of mural nodules, elevated CEA, and elevated CA19-9. These factors, however, were not able to differentiate HGD/pT1a from LGD lesions. Similarly, Kang et&#xa0;al. found that adding diffusion-weighted images to MRCP improved the ability to detect invasive malignancy in IPMN (<xref ref-type="bibr" rid="B46">46</xref>). In a recent study, the authors found that the use of contrast-enhanced harmonic EUS (CH-EUS) provided an increased diagnostic yield in the identification of malignant features of mural nodules within pancreatic cystic neoplasms (PCNs) (<xref ref-type="bibr" rid="B47">47</xref>). However, defining the degree of dysplasia in IPMN was not possible with imaging and classical tumor markers or EUS characteristics alone. In this study, we focused on establishing a pioneering system that combines the features into a patient-specific risk using unique clinical and standardized preoperative examination modalities and standardized pathological diagnostic criteria by tree models to perform accurate grade classification preoperatively.</p>
<p>The present study found 16 variables to be independently associated with the progression from LGD to HGD and pT1a to invasive carcinoma (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). Among them, accompanied by an unclear focus boundary, DM (especially new-onset DM), elevated serum CA19-9, and obstructive jaundice are obvious in the advanced stage of invasive IPMC, but are not common in HGD or pT1a IPMC. Many previous studies and guidelines have suggested that elevated serum CA19-9, DM, and obstructive jaundice are risk predictors of malignant IPMN (<xref ref-type="bibr" rid="B18">18</xref>, <xref ref-type="bibr" rid="B20">20</xref>, <xref ref-type="bibr" rid="B28">28</xref>, <xref ref-type="bibr" rid="B45">45</xref>, <xref ref-type="bibr" rid="B48">48</xref>, <xref ref-type="bibr" rid="B49">49</xref>). However, HGD and pT1a IPMN have not been previously analyzed separately from malignant IPMN. Thus, in the present study, we found the three factors could not be used as a sign of early malignancy, and their appearance often indicates that the disease is at an advanced stage of invasion. Moreover, our study suggests the presence of mural nodules should be regarded as highly suspicious of invasive carcinoma or HGD in all morphological types, which is consistent with a malignant predictor in several reports (<xref ref-type="bibr" rid="B32">32</xref>, <xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B48">48</xref>, <xref ref-type="bibr" rid="B50">50</xref>, <xref ref-type="bibr" rid="B51">51</xref>). However, we also found that nearly 12&#x2013;23% of cases of IPMN in the HGD and I-IPMC groups had no mural nodules; thus, other factors need to be considered. CBD diameter &#x2265; 15 mm and MPD dilatation are two specific signs of HGD and invasive disease (LGD <italic>vs</italic>. HGD <italic>vs</italic>. pT1a <italic>vs</italic>. I-IPMC beyond pT1a, 1 [0.7%] <italic>vs</italic>. 1 [7.7%] <italic>vs</italic>. 9 [37.5%] <italic>vs</italic>. 17[50.0%], p = 0.000; 0.4 (2.9, 0.1) <italic>vs</italic>. 1.1 (4.3, 0.4) <italic>vs</italic>. 1.3 (3.9, 0.5) <italic>vs</italic>. 0.84 (3.0, 0.2), p = 0.000). Although MT-IPMN was also associated with malignant disease (P = 0.000), the pathology of 35.3% of BD-IPMN was I-IPMC beyond pT1a. Assessing the malignant risk of BD-IPMN will require further investigation.</p>
<p>To observe the influence of high-risk factors, we used the interpretability method for tree models, which can help improve clinician understanding of IPMNs and important characteristics for diagnosis. As shown in <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>, the nearest nodes to the root of the decision tree have the greatest influence on the classification. For a simple analysis, we can see the key to distinguishing benign from malignant IPMN is mural nodules. If the mural nodule size is less than 0.575 cm, LGD IPMN is more likely. If the mural nodule size is greater than 0.575 cm, and CA19-9 is greater than 26.85 U/ml, IPMC is more likely. If the mural nodule size is greater than 0.575 cm, but CA19-9 is less than 26.85 U/ml, no history of diabetes, and CEA is greater than 5.245 ng/ml, HGD/pT1a is more likely; if CEA is less than 5.245 ng/ml, LGD is more likely. From this, we can see the appearance of mural nodules( &gt;0.575 cm) suggests early or advanced stage malignant IPMC and elevated serum CA19-9 reflects an advanced stage of invasive IPMC, which is similar to the recently published paper (<xref ref-type="bibr" rid="B52">52</xref>). In addition, the mural nodules of our decision tree algorithm was 5.75mm, and it can also be considered as a cutoff value, which was closed to previous studies (<xref ref-type="bibr" rid="B4">4</xref>, <xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B53">53</xref>),and the high accuracy of our model showed unique practical significance in our classification of LGD, HGD/pT1a and I-IPMC beyond pT1a. In the random forest model, which had a higher accuracy, the SHAP value was used for interpretation. As in <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>, the mural nodule size, MPD diameter, serum CA19-9 levels, whether the lesion edge was clear, and the presence of CBD dilatation all influenced the random forest classification model. The decision tree provided an outstanding prediction capability for each stage for IPMN, with an accuracy of 86.9% on the testing set. The random forest model also showed high diagnostic ability with an accuracy of 96.0% on the testing set.</p>
<p>The random forest model uses the ensemble learning method, which assembles multiple decision trees, and as a result, is more accurate for this 3-class classification task. Comprehensive classification, including benign, early malignant, and advanced invasive, is convenient for clinical decisions. Additionally, we have made a convenient software for this random forest model for clinicians. By inputting relative captured features, the predicted class of IPMN of a single patient can be shown.</p>
<p>There are some limitations to the present study. First, this model was developed in a population of patients who were subsequently treated surgically. Hence, the cohort may not accurately represent patients with the whole IPMN population, and the cases could have selection bias. Second, prospective investigations conducted at multiple institutions are necessary for validating the results obtained in the current study. Finally, HGD and pT1a IPMN patients were relatively few. Therefore, internal validation (10-fold cross-validation) was used to evaluate the diagnostic performance for the invasion potency of IPMN because we could not collect enough patients to perform AI when patients were separated into groups for training and test data, and the results of the cross-validation have also shown high accuracy in classifying LGD, HGD/pT1a, and I-IPMC beyond pT1a, which better proves the efficiency of our AI models.</p>
<p>Overall, a simple and objective predictive model for IPMN of each stage that can be used for any lesion type was constructed. This predictive model provides important information for clinicians and patients in assessing an individual&#x2019;s risk for early stage malignant IPMN and may help identify masses that appear benign but require surgery.</p>
</sec>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.</p>
</sec>
<sec id="s6" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The studies involving human participants were reviewed and approved by Ruijin hospital Ethics Committee Shanghai Jiaotong University School of Medicine. Written informed consent for participation was not required for this study in accordance with the national legislation and the institutional requirements.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>XH, DZ and YY had full access to all the data in the study and take responsibility for the integrity of the data and the accuracy of the data analysis. Concept and design : XH, RF, DZ. Acquisition, analysis, or interpretation of data: XH, RF, JS, YR. Drafting of the manuscript: XH. Critical revision of the manuscript for important intellectual content: DZ and YY. Statistical analysis: XH. Technical, or material support: XZ, WR. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgments</title>
<p>We thank the National Natural Science Foundation of China(81672448), the Natural Science Foundation of Shanghai (19ZR1432000), and the Guang ci Excellent Youth Program A of Ruijin Hospital (GCQN-2017-A01) for help with funding support.</p>
</ack>
<sec id="s8" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s9" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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