AUTHOR=Li Caichen , He Qihua , Liang Hengrui , Cheng Bo , Li Jianfu , Xiong Shan , Zhao Yi , Guo Minzhang , Liu Zhichao , He Jianxing , Liang Wenhua 

TITLE=Diagnostic Accuracy of Droplet Digital PCR and Amplification Refractory Mutation System PCR for Detecting EGFR Mutation in Cell-Free DNA of Lung Cancer: A Meta-Analysis

JOURNAL=Frontiers in Oncology

VOLUME=Volume 10 - 2020

YEAR=2020

URL=https://www.frontiersin.org/journals/oncology/articles/10.3389/fonc.2020.00290

DOI=10.3389/fonc.2020.00290

ISSN=2234-943X

ABSTRACT=Background: Epidermal growth factor receptor (EGFR) mutation testing in plasma cell-free DNA (cfDNA) from advanced lung cancer patients is an emerging clinical tool. This meta-analysis was designed to determine the diagnostic accuracy of two common PCR systems, droplet digital PCR (ddPCR) and amplification refractory mutation system PCR (ARMS-PCR), for detecting EGFR mutation in cfDNA.
Patients and methods: A systematic search was carried out based on electronic databases. Data from eligible studies were extracted and pooled to calculate the sensitivity, specificity, diagnostic odds ratio (DOR), area under the summary receiver-operating characteristic curve (AUROC), using tissue biopsy results as the standard method. Subgroup analyses were performed regarding EGFR mutation type, tumor stage and EGFR-TKI treatment.
Results: Twenty-three studies involving 4,725 cases were included. The plasma testing sensitivity, specificity, DOR and AUROC, compared with the matched tumor tissues, were 71.7%, 96.4%, 39.3, 0.87 for ddPCR, and 65.3%, 98.2%, 52.8, 0.71 for ARMS-PCR, respectively; by indirect comparison, significant difference could be found in sensitivity (P=0.006) but not in specificity (P=0.068). Furthermore, significant difference was found in sensitivity between tumor stage subgroups (IIIB-IV subgroup vs. IA-IV subgroup) in ARMS-PCR (73.7% vs. 64.2%, P=0.008), but not in ddPCR (72.5% vs. 71.2%, P=0.756).
Conclusions: This study demonstrates that ddPCR and ARMS-PCR have a high specificity with a practical sensitivity for detecting EGFR mutation in cfDNA, which supports their application as a supplement or an alternative to tissue biopsy in clinical practice for genotyping. It seems that ddPCR has a higher sensitivity than ARMS-PCR, especially in early stage.