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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mol. Biosci.</journal-id>
<journal-title>Frontiers in Molecular Biosciences</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mol. Biosci.</abbrev-journal-title>
<issn pub-type="epub">2296-889X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">991612</article-id>
<article-id pub-id-type="doi">10.3389/fmolb.2022.991612</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Molecular Biosciences</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Transforming growth factor-&#x3b2; in tumour development</article-title>
<alt-title alt-title-type="left-running-head">Trelford et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fmolb.2022.991612">10.3389/fmolb.2022.991612</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Trelford</surname>
<given-names>Charles B.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1937479/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Dagnino</surname>
<given-names>Lina</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1290384/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Di Guglielmo</surname>
<given-names>Gianni M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1344608/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Physiology and Pharmacology</institution>, <institution>Schulich School of Medicine and Dentistry</institution>, <institution>Western University</institution>, <addr-line>London</addr-line>, <addr-line>ON</addr-line>, <country>Canada</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Oncology</institution>, <institution>Children&#x2019;s Health Research Institute and Lawson Health Research Institute</institution>, <addr-line>London</addr-line>, <addr-line>ON</addr-line>, <country>Canada</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/894763/overview">Birija Sankar Patro</ext-link>, Bhabha Atomic Research Centre (BARC), India</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/858464/overview">Bing Shen</ext-link>, Shanghai General Hospital, China</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/706447/overview">Sujit Kumar Bhutia</ext-link>, National Institute of Technology Rourkela, India</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Gianni M. Di Guglielmo, <email>John.diguglielmo@schulich.uwo.ca</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Cellular Biochemistry, a section of the journal Frontiers in Molecular Biosciences</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>04</day>
<month>10</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>9</volume>
<elocation-id>991612</elocation-id>
<history>
<date date-type="received">
<day>11</day>
<month>07</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>15</day>
<month>09</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Trelford, Dagnino and Di Guglielmo.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Trelford, Dagnino and Di Guglielmo</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Transforming growth factor-&#x3b2; (TGF&#x3b2;) is a ubiquitous cytokine essential for embryonic development and postnatal tissue homeostasis. TGF&#x3b2; signalling regulates several biological processes including cell growth, proliferation, apoptosis, immune function, and tissue repair following injury. Aberrant TGF&#x3b2; signalling has been implicated in tumour progression and metastasis. Tumour cells, in conjunction with their microenvironment, may augment tumourigenesis using TGF&#x3b2; to induce epithelial-mesenchymal transition, angiogenesis, lymphangiogenesis, immune suppression, and autophagy. Therapies that target TGF&#x3b2; synthesis, TGF&#x3b2;-TGF&#x3b2; receptor complexes or TGF&#x3b2; receptor kinase activity have proven successful in tissue culture and in animal models, yet, due to limited understanding of TGF&#x3b2; biology, the outcomes of clinical trials are poor. Here, we review TGF&#x3b2; signalling pathways, the biology of TGF&#x3b2; during tumourigenesis, and how protein quality control pathways contribute to the tumour-promoting outcomes of TGF&#x3b2; signalling.</p>
</abstract>
<kwd-group>
<kwd>transforming growth factor-b (TGFb)</kwd>
<kwd>Smad</kwd>
<kwd>receptor trafficking</kwd>
<kwd>epithelial-mesenchymal transition (EMT)</kwd>
<kwd>autophagy</kwd>
<kwd>protein 62/sequestosome 1 (p62/SQSTM1)</kwd>
</kwd-group>
<contract-sponsor id="cn001">Cancer Research Society<named-content content-type="fundref-id">10.13039/100009326</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Transforming growth factor-&#x3b2; (TGF&#x3b2;), a central modulator of development, growth, proliferation, immune function, apoptosis, and homeostasis, plays key roles in cellular communication (<xref ref-type="bibr" rid="B80">Hajek et al., 2012</xref>). TGF&#x3b2; is secreted as a latent cytokine that is sequestered by extracellular matrix (ECM) proteins (<xref ref-type="bibr" rid="B101">Isogai et al., 2003</xref>). Following enzymatic or allosteric-mediated release and subsequent activation of TGF&#x3b2;, TGF&#x3b2; ligands bind to ubiquitously expressed cell surface receptors (<xref ref-type="bibr" rid="B94">Horiguchi et al., 2012</xref>). Autocrine or paracrine TGF&#x3b2; signalling modulates cell function by regulating transcription, translation, and post-translational modifications of several proteins (<xref ref-type="bibr" rid="B169">Massagu&#xe9;, 2012</xref>). Alterations in TGF&#x3b2; signalling pathways have been implicated in numerous pathologies, including congenital diseases, fibrotic disorders, immune dysfunction, and tumourigenesis (<xref ref-type="bibr" rid="B168">Massagu&#xe9;, 2008</xref>; <xref ref-type="bibr" rid="B193">Neuzillet et al., 2015</xref>). The regulation of TGF&#x3b2; signalling in cancer is complex, as it generally plays a tumour suppressive role in normal tissues and early tumour development (<xref ref-type="bibr" rid="B217">Principe et al., 2014</xref>). In contrast, mutations or abnormalities in the tumour suppressive arms of TGF&#x3b2; signalling are common in advanced cancers (<xref ref-type="bibr" rid="B85">Harradine and Akhurst, 2006</xref>). In tumour cells, this cytokine drives tumourigenesis by inducing epithelial-mesenchymal transition (EMT), metastasis, angiogenesis, autophagy, and immune supression (<xref ref-type="bibr" rid="B19">Bierie and Moses, 2006</xref>). In this review, we will discuss TGF&#x3b2; signalling pathways and how TGF&#x3b2; may progress tumourigenesis.</p>
</sec>
<sec id="s2">
<title>Transforming growth factor-&#x3b2; pathways</title>
<p>The TGF&#x3b2; superfamily consists of 33-members of secreted cytokines that are ubiquitously expressed in vertebrates and invertebrates. This superfamily includes TGF&#x3b2; proteins, bone morphogenetic proteins (BMPs), activins, inhibins, nodal, lefty1, lefty2, anti-muellerian hormone (AMH), growth differentiation factors (GDFs), myostatin, and glial cell-derived neurotrophic factor (GDNF) (<xref ref-type="bibr" rid="B146">Lichtman et al., 2016</xref>). On the basis of their biological functions and mature protein structure, these members can be subclassified into four subfamilies (<xref ref-type="bibr" rid="B42">David and Massagu&#xe9;, 2018</xref>). In humans, the TGF&#x3b2; subfamily consists of TGF&#x3b2;1, TGF&#x3b2;2, TGF&#x3b2;3, the activin/inhibin/nodal subfamily consists of activinA, activinB, nodal, lefty1, lefty2, inhibin&#x3b1;, inhibin&#x3b2;, the BMP/GDF subfamily consists of nine BMPs, and nine GDFs, and the fourth subfamily that has no defined relationship includes AMH, BMP15, GDF9, GDF15, and GDNF (<xref ref-type="bibr" rid="B191">Mueller and Nickel, 2012</xref>).</p>
<p>As homodimers or heterodimers, TGF&#x3b2; superfamily members signal through heteromeric TGF&#x3b2; receptor complexes. Seven different type I receptors, five type II receptors, and betaglycan and endoglin type III receptors have been described in vertebrates and invertebrates (<xref ref-type="bibr" rid="B273">Weiss and Attisano, 2013</xref>). Receptor activation leads to signalling cascades modulated by several classes of Sma-mothers against decapentaplegic (Smad) proteins, such as receptor regulated Smads (R-Smads), common Smads (co-Smads), and inhibitory Smads (I-Smads) (<xref ref-type="bibr" rid="B169">Massagu&#xe9;, 2012</xref>) as well as non-Smad signalling proteins (<xref ref-type="bibr" rid="B190">Mu et al., 2012</xref>). Although an extensive number of TGF&#x3b2; superfamily members activate specific subsets of receptors and signalling molecules, this review will focus on the TGF&#x3b2; subfamily.</p>
<sec id="s2-1">
<title>Synthesis and post-translational modifications of TGF&#x3b2;</title>
<p>In most metazoans, three genes encoding TGF&#x3b2; isoforms have been described, and in humans the <italic>TGFB1</italic>, <italic>TGFB2</italic>, and <italic>TGFB3</italic> genes are located on chromosomes 19, 1, and 14, respectively (<xref ref-type="bibr" rid="B195">Nishimura et al., 1993</xref>; <xref ref-type="bibr" rid="B39">Cruts et al., 1995</xref>; <xref ref-type="bibr" rid="B76">Green et al., 2001</xref>). Although <italic>TGFB1</italic>, <italic>TGFB2</italic>, and <italic>TGFB3</italic> genes are highly conserved across species, there are some exceptions. For instance, <italic>TGFB4</italic> has been identified in avian species; however, genetic mapping of chicken <italic>TGFB4</italic> suggested that it is orthologous to human <italic>TGFB1</italic> (<xref ref-type="bibr" rid="B83">Halper et al., 2004</xref>)<italic>.</italic> Moreover, some South African frogs (<italic>Xenopus laevis</italic>) express a <italic>tgfb5</italic> gene (<xref ref-type="bibr" rid="B129">Kondaiah et al., 1990</xref>). Translation of the <italic>TGFB1, TGFB2</italic>, and <italic>TGFB3</italic> mRNA generates precursor polypeptides termed pre-pro-TGF&#x3b2;, which are composed, respectively of 390, 412, and 412&#xa0;amino acid residues (<xref ref-type="bibr" rid="B116">Khalil, 1999</xref>). The pre-pro-TGF&#x3b2; species are composed of a signal peptide, a large amino-terminal latency-associated peptide (LAP), which ensures proper folding and transportation through the Golgi complex, and the residues of the mature ligand (<xref ref-type="bibr" rid="B217">Principe et al., 2014</xref>). Following signal peptide removal, disulfide isomerase catalyzes the formation of three disulfide bonds between two pre-pro-TGF&#x3b2; monomers, linking cysteine residues at two positions in the LAP and one position in what will become the mature ligand. This modification gives rise to pro-TGF&#x3b2; (<xref ref-type="bibr" rid="B70">Gentry et al., 1988</xref>). Within the Golgi complex membrane, furin and other convertases cleave LAP to generate small latent TGF&#x3b2; complexes. Non-covalent bonds tether LAP to TGF&#x3b2;, rendering the latter inactive (<xref ref-type="bibr" rid="B213">Poniatowski et al., 2015</xref>). Small latent TGF&#x3b2; complexes, composed of a mature 25&#xa0;kDa TGF&#x3b2; dimer and two LAP moieties, are subsequently packaged into secretory vesicles in the Golgi complex (<xref ref-type="bibr" rid="B51">Dubois et al., 1995</xref>). Once secreted from the cell, the small latent TGF&#x3b2; complexes are retained in the extracellular matrix (ECM), bound to latent TGF&#x3b2; binding proteins (LTBPs) to form large latent TGF&#x3b2; complexes (<xref ref-type="bibr" rid="B169">Massagu&#xe9;, 2012</xref>; <xref ref-type="bibr" rid="B217">Principe et al., 2014</xref>). TGF&#x3b2; dimers can subsequently be released from the large latent TGF&#x3b2; complexes through various enzymatic reactions or allosteric mechanisms (<xref ref-type="fig" rid="F1">Figure 1</xref>) (<xref ref-type="bibr" rid="B274">Wipff et al., 2007</xref>; <xref ref-type="bibr" rid="B250">Tatti et al., 2008</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>TGF&#x3b2; ligand maturation. Following <italic>Transforming Growth Factor-&#x3b2;</italic> (<italic>TGFB</italic>) gene (red) transcription and <italic>TGFB</italic> mRNA translation in the nucleus and endoplasmic reticulum, respectively, TGF&#x3b2; is synthesized as a precursor pro-TGF&#x3b2; (pre-pro-TGF&#x3b2;). Pre-pro-TGF&#x3b2; contains an amino (N)-terminal signal peptide latency-associated peptide, and mature ligand. The N terminal signal peptide ensures transportation to the Golgi complex. In the Golgi complex, the signal peptide is cleaved, and disulfide isomerases catalyze disulfide bonds (SS) between two pre-pro-TGF&#x3b2; monomers to generate pro-TGF&#x3b2;. Furin convertases modify the latency-associated peptides, which non-covalently associate with mature ligands to generate a small latent TGF&#x3b2; complex. The small latent TGF&#x3b2; complex is secreted from the cell and attaches to latent TGF&#x3b2; binding proteins in the extracellular matrix to form a large latent TGF&#x3b2; complex. Mature ligands are released from the large latent TGF&#x3b2; complexes <italic>via</italic> allosteric interactions or proteolysis mediated by enzymes.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g001.tif"/>
</fig>
<p>The enzymatic activation of TGF&#x3b2; through proteolysis requires matrix metalloproteinases (MMPs), plasmin, and other proteases (<xref ref-type="bibr" rid="B125">Kobayashi et al., 2014</xref>; <xref ref-type="bibr" rid="B130">Korol et al., 2014</xref>). MMP2 and MMP9 are Ca<sup>2&#x2b;</sup>-dependent Zn<sup>&#x2b;2</sup>-containing endopeptidases that target the LAP-binding domains of LTBPs, releasing TGF&#x3b2; from the large latent TGF&#x3b2; complexes. Plasmin generated at the cell surface, following plasminogen cleavage by urokinase plasminogen, also contributes to TGF&#x3b2; release from LAPs (<xref ref-type="bibr" rid="B289">Yee et al., 1993</xref>; <xref ref-type="bibr" rid="B293">Yu and Stamenkovic, 2000</xref>). Alternatively, allosteric activation of TGF&#x3b2; is dependent on several LAP-binding cell surface proteins, such as thrombospondin-1, mannose 6-phosphate receptors, and integrins, which induce conformational rearrangements of LAP (<xref ref-type="bibr" rid="B45">Dennis and Rifkin, 1991</xref>; <xref ref-type="bibr" rid="B231">Schultz-Cherry and Murphy-Ullrich, 1993</xref>; <xref ref-type="bibr" rid="B229">Sarrazy et al., 2014</xref>; <xref ref-type="bibr" rid="B247">Takasaka et al., 2018</xref>). Modifications of LAP are also induced by reactive oxygen species (<xref ref-type="bibr" rid="B211">Pociask et al., 2004</xref>) as well as acidic (pH &#x3c; 2) or basic (pH &#x3e; 12) environments (<xref ref-type="bibr" rid="B160">Lyons et al., 1988</xref>). Since these diverse LAP conformers no longer favour binding to TGF&#x3b2;, the latter is released from the large latent TGF&#x3b2; complexes.</p>
</sec>
<sec id="s2-2">
<title>Smad-dependent TGF&#x3b2; signalling</title>
<p>After TGF&#x3b2; ligands are released from large latent TGF&#x3b2; complexes, they bind to cognate cell surface receptors. The Type I and II TGF&#x3b2; receptors (TGF&#x3b2;RI and TGF&#x3b2;RII) exhibit serine-threonine kinase activity, and initiate signalling cascades upon ligand stimulation (<xref ref-type="bibr" rid="B276">Wrana et al., 1994</xref>). Type III TGF&#x3b2; receptors (TGF&#x3b2;RIIIs) do not exhibit catalytic activity, but may facilitate the interaction between TGF&#x3b2; ligands and TGF&#x3b2;RII (<xref ref-type="bibr" rid="B157">L&#xf3;pez-Casillas et al., 1994</xref>; <xref ref-type="bibr" rid="B177">Mclean and Di Guglielmo, 2010</xref>). TGF&#x3b2; signalling is initiated when TGF&#x3b2; binds to TGF&#x3b2;RII, triggering the association and phosphorylation of the glycine/serine domain of TGF&#x3b2;RI (<xref ref-type="bibr" rid="B169">Massagu&#xe9;, 2012</xref>). TGF&#x3b2;RI in turn phosphorylates downstream intracellular signalling molecules to induce canonical Smad-dependent and non-canonical Smad-independent TGF&#x3b2; signalling, respectively (<xref ref-type="bibr" rid="B166">Massagu&#xe9; et al., 2000</xref>; <xref ref-type="bibr" rid="B79">Gunaratne and DiGuglielmo, 2013</xref>; <xref ref-type="bibr" rid="B175">McLean et al., 2013</xref>; <xref ref-type="bibr" rid="B78">Gunaratne et al., 2014</xref>).</p>
<p>All three classes of Smad proteins, R-Smads (Smad2/3), co-Smad (Smad4), and I-Smads (Smad6/7), temporally regulate TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B167">Massagu&#xe9; et al., 2005</xref>). Signal initiation begins when TGF&#x3b2;RI phosphorylates Smad2 or Smad3 on the carboxyl (C) terminus serine-serine-x-serine (SSXS) motif. Phosphorylated Smad2/3 is then released from the Smad anchor for receptor activation (SARA) protein into the cytoplasm (<xref ref-type="bibr" rid="B262">Tsukazaki et al., 1998</xref>; <xref ref-type="bibr" rid="B221">Qin et al., 2002</xref>), where it can form hetero-dimeric or hetero-trimeric complexes with Smad4 (<xref ref-type="bibr" rid="B170">Massague and Wotton, 2000</xref>; <xref ref-type="bibr" rid="B42">David and Massagu&#xe9;, 2018</xref>). These complexes subsequently translocate into the nucleus, where they regulate gene expression directly, by activating transcription, or indirectly by modulating the activity of other transcription factors (<xref ref-type="bibr" rid="B62">Finnson et al., 2013</xref>). Smad targeted genes include I-Smads (<xref ref-type="bibr" rid="B32">Chen et al., 1999</xref>), cyclin-dependent kinase 4 (CDK4) (<xref ref-type="bibr" rid="B55">Ewen et al., 1995</xref>), and EMT-transcription factors, including Snail Family Transcriptional Repressor one and 2 (SNAIL and SLUG), Zinc Finger E-box Binding Homeobox 1 and 2 (ZEB1 and ZEB2), Twist-related Protein 1 (TWIST1), Forkhead box C2 (FOXC2), Forkhead box A1 (FOXA1), Forkhead box A2 (FOXA2), Paired-related Homeobox 1 (PRX1), and High Mobility Group AT-hook 2 (HMGA2; <xref ref-type="fig" rid="F2">Figure 2A</xref>) (<xref ref-type="bibr" rid="B80">Hajek et al., 2012</xref>; <xref ref-type="bibr" rid="B111">Katsuno et al., 2013</xref>). Through negative feedback mechanisms, Smad6 and Smad7 terminate TGF&#x3b2; pathway activation (<xref ref-type="fig" rid="F2">Figure 2A</xref>). I-Smads block R-Smad access to TGF&#x3b2;RI or recruit phosphatases (<xref ref-type="bibr" rid="B104">Iyengar, 2017</xref>; <xref ref-type="bibr" rid="B119">Kim and Baek, 2018</xref>), leading to dephosphorylation of active receptors (<xref ref-type="bibr" rid="B235">Shi et al., 2004</xref>). I-Smads also form complexes with E3 ubiquitin ligases, such as Smad ubiquitination regulatory factor 1 or 2 (Smurf1 or Smurf2), resulting in the degradation of TGF&#x3b2; receptors (<xref ref-type="bibr" rid="B119">Kim and Baek, 2018</xref>; <xref ref-type="bibr" rid="B180">Miller et al., 2018</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Canonical (Smad-dependent) and non-canonical (Smad-independent) TGF&#x3b2; signalling. <bold>(A)</bold> Transforming growth factor-&#x3b2; (TGF&#x3b2;) receptor type III (TGF&#x3b2;RIII) presents TGF&#x3b2; to the type II receptor (TGF&#x3b2;RII). The TGF&#x3b2;-TGF&#x3b2;RII complex phosphorylates TGF&#x3b2; receptor type I (TGF&#x3b2;RI), which in turn phosphorylates R-Smads, Smad2 or Smad3. Phosphorylated Smad2/3 are released from the Smad anchor for receptor activation (SARA) protein, and translocate into the nucleus or form heterodimers/heterotrimers with Smad4 prior to nuclear translocation. Once in the nucleus, Smads function as transcription factors or interact with other transcription factors to regulate gene expression. Examples of genes regulated by Smads include, cyclin-dependent kinases (CDKs), Snail Family Transcriptional Repressor 1 and 2 (<italic>SNAIL/SLUG</italic>), Zinc Finger E-box Binding Homeobox one and 2 (<italic>ZEB1/ZEB2</italic>), Twist-related Protein 1 (<italic>TWIST1</italic>), Forkhead box C2 (<italic>FOXC2</italic>), Forkhead box A1 (<italic>FOXA1</italic>), Forkhead box A2 (<italic>FOXA2</italic>), Paired-related Homeobox 1 (<italic>PRX1</italic>), High Mobility Group AT-hook 2 (<italic>HMGA2</italic>), and <italic>SMAD7</italic>&#x2014;which in turn dampens TGF&#x3b2; signal transduction. <bold>(B)</bold> In non-canonical transforming growth factor-&#x3b2; (TGF&#x3b2;) signalling, TGF&#x3b2; receptor type I (TGF&#x3b2;RI) phosphorylates numerous downstream signalling molecules including TGF&#x3b2;-activated kinase 1 (TAK1), src homology domain containing protein A (ShcA), and phosphoinositide 3-kinase (PI3K). Although partitioning defective six homolog (Par6) binds to TGF&#x3b2;RI, it is phosphorylated by TGF&#x3b2;RII. TGF&#x3b2;RI kinase activity is also important for Ras homolog family member A (RhoA) and cell division control protein 42 (CDC42) activation. The Par6/CDC42/RhoA pathway regulates adherens junctions, tight junctions, and stress fiber formation. PI3K phosphorylates protein kinase B (AKT), which inhibits Forkhead box O (FoxO) transcription factors that regulate genes responsible for DNA repair, cell cycle arrest, survival, and T-lymphocyte function. AKT also regulates cell growth, proliferation, motility, and survival by activating mechanistic target of rapamycin (mTOR). After ShcA is phosphorylated, it forms a complex with growth factor receptor bound 2 (Grb2) and sons of sevenless (Sos) to phosphorylate membrane bound Ras. This initiates a signalling cascade involving mitogen-activated protein kinase kinase (Raf), mitogen-activated protein kinase (MEK), and extracellular signal-regulated kinase 1 (ERK1). ERK1 upregulates activator protein 1 (AP1) and E-twenty-six Like-1 Protein (ELK1) transcription factors. AP1 upregulates genes that regulate differentiation, proliferation, and apoptosis, whereas ELK1 upregulates genes involved with cell-cell attachments, cell-extracellular matrix (ECM) attachments, and motility. TGF&#x3b2;RI phosphorylation promotes lysine (K)63-linked polyubiquitination of tumour necrosis factor receptor-associated factor 6 (TRAF6). TRAF6 forms a complex with TAK1 binding protein two and 3 (TAB2 and TAB3) to recruit TAK1. TGF&#x3b2;RI phosphorylates TAK1, which initiates signalling cascades that phosphorylate mitogen-activated protein kinase 3/6 (MKK3/6). MKK3/6 phosphorylates c-Jun amino-terminal kinase (JNK) and p38 MAPK. JNK regulates c-Jun and AP1 transcription factors, whereas p38 MAPK regulates activating transcription factor 2 (ATF2), p53, and ELK1 transcription factors. cJun upregulates genes involved with proliferation and survival, whereas ATF2 upregulates genes that modulate development, motility, apoptosis, and inflammation.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g002.tif"/>
</fig>
</sec>
<sec id="s2-3">
<title>Structure of Smad proteins</title>
<p>Smad structure accounts for differences in Smad function. Structurally, Smad proteins have a Mad Homology 1 (MH1) domain, separated by a flexible linker region from a MH2 domain (<xref ref-type="bibr" rid="B236">Shi et al., 1998</xref>; <xref ref-type="bibr" rid="B162">Macias et al., 2015</xref>). MH1 domains contain a nuclear localization signal and &#x3b2;-hairpin loop that mediates interactions with glycine cysteine-rich Smad-binding elements on DNA (<xref ref-type="bibr" rid="B109">Jonk et al., 1998</xref>; <xref ref-type="bibr" rid="B236">Shi et al., 1998</xref>), whereas MH2 domains interact with TGF&#x3b2; receptors and mediate binding to other Smad proteins, transcription factors, and co-activators or co-repressors of transcription (<xref ref-type="bibr" rid="B280">Wu et al., 2001</xref>). Among the three regions, the greatest variability is observed within the linker region. The linker region of R-Smads contain phosphorylation sites for multiple kinases, such as CDKs and mitogen-activated protein kinases (MAPKs) (<xref ref-type="bibr" rid="B167">Massagu&#xe9; et al., 2005</xref>). Furthermore, within the linker region, both R-Smads and I-Smads, but not Smad4, have a proline-proline-x-tyrosine (PPXY) motif to bind to E3 ubiquitin ligases (<xref ref-type="bibr" rid="B220">Qin et al., 1999</xref>; <xref ref-type="bibr" rid="B162">Macias et al., 2015</xref>). Although MH1 and MH2 domains are highly conserved, there are some notable differences. I-Smads are missing the MH1 domain, therefore, cannot bind to DNA (<xref ref-type="bibr" rid="B181">Miyazawa and Miyazono, 2017</xref>). The MH2 domains of R-Smads have a &#x3b2;1-strand, L3 loop, and &#x3b1;-helix five structure that together mediates binding to TGF&#x3b2;RI or SARA (<xref ref-type="bibr" rid="B236">Shi et al., 1998</xref>; <xref ref-type="bibr" rid="B280">Wu et al., 2001</xref>; <xref ref-type="bibr" rid="B162">Macias et al., 2015</xref>). Although the structure of Smad2 and Smad3 are similar, there are notable differences. For instance, Smad2 has two inserts in its MH1 domain (<xref ref-type="bibr" rid="B236">Shi et al., 1998</xref>). One of these inserts, known as the E3 insert, was once believed to disrupt the &#x3b2;-hairpin loop, preventing Smad2 from binding DNA (<xref ref-type="bibr" rid="B47">Dennler et al., 1998</xref>; <xref ref-type="bibr" rid="B46">Dennler et al., 1999</xref>). Further analysis indicated that different conformations of the E3 insert regulate MH1 domain structure, which explains why in some instances Smad2 has been shown to bind to DNA (<xref ref-type="bibr" rid="B6">Arag&#xf3;n et al., 2019</xref>).</p>
<p>Although Smad4 is essential to many TGF&#x3b2;-dependent changes in gene expression, Smad4 is not essential for R-Smad nuclear translocation nor is it necessary for some TGF&#x3b2;-dependent transcriptional functions (<xref ref-type="bibr" rid="B252">Ten Dijke and Hill, 2004</xref>). Smad4 also performs TGF&#x3b2;-independent functions that include silencing the expression of TGF&#x3b2; target genes in T-lymphocytes (T-cells) (<xref ref-type="bibr" rid="B97">Igalouzene et al., 2022</xref>), upregulating genes that promote natural killer (NK) cell maturation (<xref ref-type="bibr" rid="B270">Wang et al., 2018</xref>), and tumour suppression by mediating Aurora A kinase degradation (<xref ref-type="bibr" rid="B105">Jia et al., 2014</xref>). Although the roles of Smad4 remain incompletely understood, Smad4 is the only Smad with a nuclear export signal and a Smad activation domain (SAD) within its linker region. The SAD region is recognized by the chromatin modifiers p300 and CREB-binding protein co-activators (<xref ref-type="bibr" rid="B215">Pouponnot et al., 1998</xref>). Although Smad4 SAD deletion cells are still able to bind p300 and CREB co-activators, these Smad4-p300 and Smad4-CREB complexes are unable to activate transcription (<xref ref-type="bibr" rid="B44">De Caestecker et al., 2000</xref>). In this manner, Smad4 contributes to the regulation of gene expression through p300 and CREB-binding protein co-activator complexes.</p>
</sec>
<sec id="s2-4">
<title>Smad-independent TGF&#x3b2; signalling</title>
<p>Smad-independent TGF&#x3b2; signalling occurs through various pathways (<xref ref-type="fig" rid="F2">Figure 2B</xref>) (<xref ref-type="bibr" rid="B301">Zhang, 2009</xref>). One involves the MAPK cascade <italic>via</italic> tumour necrosis factor receptor-associated factor 6 (TRAF6). Upon stimulation by TGF&#x3b2;, TGF&#x3b2;RI associates with TRAF6, leading to lysine (K)63 polyubiquitination of this protein. K63-linked polyubiquitination provides a scaffold that subsequently recruits TGF&#x3b2;-activated kinase 1 (TAK1), as well as TAK1-binding proteins. After TAK1-dependent phosphorylation, MAPK kinase 3/6 phosphorylates c-Jun amino-terminal kinase (JNK) and p38 MAPK. JNK and p38 MAPK translocate into the nucleus, where they phosphorylate several targets, including p53, activator protein 1 (AP1), E-twenty-six like-1 protein (ELK1), activating transcription factor 2 (ATF2), and cJun (<xref ref-type="bibr" rid="B286">Yamashita et al., 2008</xref>). These transcription factors regulate the expression of genes involved in apoptosis, inflammation, motility, development, cell-cell attachments, cell-ECM attachments, and proliferation (<xref ref-type="bibr" rid="B43">De Borst et al., 2006</xref>).</p>
<p>The protein kinase B (AKT) pathway is activated by TGF&#x3b2;RI phosphorylation of phosphoinositide 3-kinase (PI3K), which in turn activates AKT (<xref ref-type="bibr" rid="B244">Suwanabol et al., 2012</xref>). Downstream targets of AKT include mechanistic target of rapamycin (mTOR), a regulator of cell growth, proliferation, motility, survival, autophagy, transcription, and protein synthesis (<xref ref-type="bibr" rid="B298">Zhang et al., 2013</xref>). Additionally, AKT inhibits Forkhead box O (FoxO) transcription factors, which are important regulators of CDKs, survival, DNA repair, and T-cell activity (<xref ref-type="bibr" rid="B297">Zhang et al., 2005</xref>; <xref ref-type="bibr" rid="B300">Zhang et al., 2011</xref>).</p>
<p>Smad-independent TGF&#x3b2; signalling also leads to modulation of small GTPase activity (<xref ref-type="bibr" rid="B53">Edlund et al., 2002</xref>). Specifically, TGF&#x3b2;RII can phosphorylate partitioning defective six homolog (Par6) (<xref ref-type="bibr" rid="B202">Ozdamar et al., 2005</xref>), whereas Ras homolog family member A (RhoA), and cell division control protein 42 (CDC42) activation relies on TGF&#x3b2;RI activity (<xref ref-type="bibr" rid="B64">Fleming et al., 2009</xref>; <xref ref-type="bibr" rid="B120">Kim et al., 2016</xref>). These proteins modulate cell-cell and cell-ECM attachments by regulating the function, stability, and organization of proteins essential to adherens and tight junctions. RhoA also promotes cell migration by inducing stress fiber formation (<xref ref-type="bibr" rid="B272">Warner et al., 2010</xref>; <xref ref-type="bibr" rid="B198">Nunes de Almeida et al., 2019</xref>). Stress fibers are contractile actomyosin bundles found in non-muscle cells composed of filamentous actin, &#x3b1;-actinin, and non-muscle myosin II filaments that may aid in cell movement (<xref ref-type="bibr" rid="B81">Hakkinen et al., 2011</xref>; <xref ref-type="bibr" rid="B142">Lehtim&#xe4;ki et al., 2021</xref>).</p>
<p>Tyrosine residues on the src homology domain containing protein A (ShcA) was also reported to be phosphorylated by TGF&#x3b2;RI (<xref ref-type="bibr" rid="B139">Lee et al., 2007</xref>). ShcA forms a complex containing growth factor receptor bound 2 (Grb2) and sons of sevenless (Sos) to activate Ras. The latter initiates downstream MAPK cascades that ultimately phosphorylates extracellular signal-regulated kinase (ERK) (<xref ref-type="bibr" rid="B48">Derynck and Zhang, 2003</xref>). ERK phosphorylates transcription factors, such as AP1 and ELK1, that regulate the expression of genes essential for cell-cell attachments, cell-ECM attachments, motility, differentiation, proliferation, and apoptosis (<xref ref-type="bibr" rid="B301">Zhang, 2009</xref>; <xref ref-type="bibr" rid="B190">Mu et al., 2012</xref>).</p>
</sec>
<sec id="s2-5">
<title>TGF&#x3b2; receptor endocytosis regulates signalling strength and duration</title>
<p>Endocytosis of TGF&#x3b2;RI, TGF&#x3b2;RII, and TGF&#x3b2;-TGF&#x3b2;RII complexes are mediated <italic>via</italic> clathrin- or caveolae-dependent mechanisms (<xref ref-type="fig" rid="F3">Figure 3</xref>) (<xref ref-type="bibr" rid="B137">Le Roy and Wrana, 2005</xref>). Clathrin-dependent endocytosis allows TGF&#x3b2; signalling to continue following receptor internalization and is associated with signal amplification (<xref ref-type="bibr" rid="B285">Yakymovych et al., 2018</xref>). Clathrin-coated pits sequester TGF&#x3b2; receptors <italic>via</italic> the clathrin coat adaptor complex 2 (AP2) (<xref ref-type="bibr" rid="B287">Yao et al., 2002</xref>). AP2 is a hetero-tetramer that binds to clathrin and consists of four adaptins (&#x3b2;2, &#xb5;2, &#x3b1;, and &#x3c3;2) (<xref ref-type="bibr" rid="B131">Kovtun et al., 2020</xref>). Unlike many receptors within the plasma membrane that bind to &#xb5;2-adaptin, TGF&#x3b2; receptors directly bind to &#x3b2;2-adaptin (<xref ref-type="bibr" rid="B287">Yao et al., 2002</xref>). Next, several proteins facilitate budding and fission of clathrin-coated pits that are internalized as clathrin-coated vesicles. Clathrin-coated vesicles subsequently shed AP2 and fuse with the early endosome membrane compartment in a Rab5-dependent manner (<xref ref-type="bibr" rid="B233">Semerdjieva et al., 2008</xref>). Early endosome membrane compartments are enriched in phosphatidylinositol 3-phosphate (PI3P), which serve as recruitment sites for FYVE domain-containing proteins, such as early endosome antigen 1 (EEA1), endofin, and SARA (<xref ref-type="bibr" rid="B141">Lee et al., 2005</xref>). By associating with SARA on early-endosomal membranes, the R-Smads, Smad2/3, are poised to interact with TGF&#x3b2; receptors (<xref ref-type="bibr" rid="B103">Itoh et al., 2002</xref>). Since regions involved in clathrin-dependent internalization are enriched in SARA, these routes of subcellular trafficking promote TGF&#x3b2;RI-dependent R-Smad phosphorylation (<xref ref-type="bibr" rid="B162">Macias et al., 2015</xref>). SARA also amplifies TGF&#x3b2; signalling because SARA overexpression leads to endosomal swelling, which delays receptor recycling/degradation (<xref ref-type="bibr" rid="B96">Hu et al., 2002</xref>). In support of this, when the localization of SARA and EEA1-positive early endosomes was disrupted, there was a decrease in both TGF&#x3b2;-induced Smad2 phosphorylation and Smad2 nuclear translocation (<xref ref-type="bibr" rid="B262">Tsukazaki et al., 1998</xref>; <xref ref-type="bibr" rid="B87">Hayes et al., 2002</xref>). Finally, endofin facilitates TGF&#x3b2; signalling because it binds to TGF&#x3b2;RI and Smad4, which brings Smad4 in close proximity to phosphorylated R-Smads. Indeed, endofin knockdown reduced transcriptional responses to TGF&#x3b2; and impaired TGF&#x3b2;-dependent apoptosis (<xref ref-type="bibr" rid="B34">Chen et al., 2007</xref>). Therefore, clathrin-dependent trafficking of TGF&#x3b2; receptors enables R-Smad phosphorylation in the early endosome and prolongs the duration in which ligands, receptors, and downstream signalling molecules are in close proximity. The early endosome is primarily responsible for sorting endocytosed TGF&#x3b2; receptors, which may either recycle back to the plasma membrane in Rab11-positive vesicles (<xref ref-type="bibr" rid="B291">Yin et al., 2013</xref>) or be degraded in Rab7-positive late endosomes and lysosomes (<xref ref-type="bibr" rid="B59">Feng et al., 1995</xref>) (<xref ref-type="fig" rid="F3">Figure 3A</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Clathrin- and caveolae-dependent endocytosis regulates the duration and strength of TGF&#x3b2; signalling. <bold>(A)</bold> Clathrin-dependent receptor trafficking is mediated by triskelion shaped clathrin proteins (green). Clathrin tethers transforming growth factor-&#x3b2; (TGF&#x3b2;) receptors to clathrin-coated pits <italic>via</italic> the &#x3b2;2 adaptin of the clathrin coat adaptor complex 2 (AP2). Clathrin-coated pits pinch off the plasma membrane to form clathrin-coated vesicles that fuse with early endosome membrane compartments by a Rab5-dependent process. In the presence of TGF&#x3b2;, TGF&#x3b2; receptors within clathrin-coated vesicles are active and phosphorylate downstream signalling molecules, such as Smads. Clathrin-coated pits and vesicles are enriched in Smad anchor for receptor activation (SARA) proteins that bind to R-Smads, which augments TGF&#x3b2; signalling. Early endosomes bind to FYVE domain-containing proteins, such as endofin and SARA. Endofin enhances TGF&#x3b2; signalling in early endosomes by tethering Smad4 to early endosomes. Clathrin-dependent receptor trafficking promotes R-Smad phosphorylation, which subsequently enters the nucleus with and without Smad4 to regulate transcription. The fates of the TGF&#x3b2; receptors subjected to clathrin-dependent receptor trafficking involve recycling back to the plasma membrane in Rab11-positive vesicles or lysosomal degradation. Lysosomal degradation occurs after early endosomes mature into Rab7-positive late endosomes, which eventually fuse with lysosomes. <bold>(B)</bold> Caveolae-dependent receptor trafficking is facilitated by caveolin-1 proteins (red). Caveolae-coated vesicles are associated with dampening TGF&#x3b2; signalling; however, non-canonical p38 MAPK signalling requires caveolae-coated vesicles. Caveolin-1 may bind to TGF&#x3b2; receptor type I (TGF&#x3b2;RI) directly and attenuate its kinase activity. Caveolae-coated vesicles are enriched with Smad7-Smurf2 complexes that target TGF&#x3b2; receptors to proteasome-dependent degradation. Prior to degradation, caveolae-coated vesicles may fuse with early endosomes in a Rab5-dependent manner or mature into caveolin-1-positive endosomes known as caveosomes.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g003.tif"/>
</fig>
<p>Caveolae are plasma membrane invaginations enriched with caveolin-1 that are localized in membrane rafts, plasma membrane subdomains rich in cholesterol and glycosphingolipids (<xref ref-type="bibr" rid="B74">Golub et al., 2004</xref>). Caveolin-positive vesicles may mature into or fuse with pre-existing caveosomes or early endosomes in a Rab5-independent or -dependent manner, respectively (<xref ref-type="bibr" rid="B208">Pelkmans et al., 2004</xref>). Caveolin-dependent endocytosis is associated with dampening and disrupting TGF&#x3b2; signalling. Unlike clathrin-coated vesicles, SARA localizes away from membrane rafts and Smad7-Smurf2 complexes are commonly associated with caveolin-positive vesicles. Due to the association with Smad7-Smurf2, TGF&#x3b2;RII/TGF&#x3b2;RI complexes within caveolin-positive vesicles are targeted for proteasomal degradation (<xref ref-type="bibr" rid="B77">Guglielmo et al., 2003</xref>; <xref ref-type="bibr" rid="B137">Le Roy and Wrana, 2005</xref>). Caveolin-1 also has been shown to directly bind to TGF&#x3b2;RI following stimulation, which suppresses Smad2 phosphorylation possibly by antagonizing TGF&#x3b2;RI kinase activity (<xref ref-type="bibr" rid="B223">Razani et al., 2001</xref>) (<xref ref-type="fig" rid="F3">Figure 3B</xref>). Caveolin-1 also disrupts TGF&#x3b2; signalling through association with CD109, a TGF&#x3b2; co-receptor. In the presence of ligands, CD109 promotes the localization of TGF&#x3b2; receptors in caveolae and increases receptor degradation (<xref ref-type="bibr" rid="B21">Bizet et al., 2011</xref>). Indeed, after the TGF&#x3b2;RII/TGF&#x3b2;RI complexes are endocytosed in caveolin-positive vesicles, TGF&#x3b2; signalling is inhibited (<xref ref-type="bibr" rid="B77">Guglielmo et al., 2003</xref>). However, the activation of some non-Smad signalling pathways, such as p38 MAPK, rely on the localization of TGF&#x3b2; receptors in caveolae (<xref ref-type="bibr" rid="B306">Zuo and Chen, 2009</xref>).</p>
<p>In summary, the route of TGF&#x3b2; receptor subcellular trafficking regulates signalling duration, strength, and receptor fate (<xref ref-type="bibr" rid="B176">McLean and Di Guglielmo, 2014</xref>). Although some TGF&#x3b2; signalling occurs in the absence of receptor internalization, clathrin- or caveolae-dependent endocytosis can enhance or dampen TGF&#x3b2; signal transduction pathways (<xref ref-type="bibr" rid="B285">Yakymovych et al., 2018</xref>).</p>
</sec>
<sec id="s2-6">
<title>The role of the ubiquitin-proteasome pathway in TGF&#x3b2; signalling</title>
<p>The ubiquitin-proteasome pathway (UPP) also regulates the strength and duration of TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B268">Wang, 2003</xref>). The polyubiquitination of TGF&#x3b2; receptors, R-Smads, and downstream effectors is dependent on E1 (activating), E2 (conjugating), and E3 (ubiquitin ligase) enzymes (<xref ref-type="bibr" rid="B119">Kim and Baek, 2018</xref>). E1 enzymes hydrolyze ATP to activate the C terminus of ubiquitin. Activated ubiquitin is then transferred to an E2 enzyme. E3 enzymes subsequently bind to E2-ubiquitin conjugates and transfers ubiquitin to K residues on TGF&#x3b2; receptors, R-Smads or downstream effectors (<xref ref-type="bibr" rid="B128">Komander, 2009</xref>). K48-linked polyubiquitin chains target TGF&#x3b2; receptors, R-Smads, and downstream effectors to 26S proteasomes, which are multi subunit proteases (<xref ref-type="bibr" rid="B61">Finley et al., 2016</xref>). Deubiquitinating enzymes decrease proteasome-dependent degradation by removing ubiquitin (<xref ref-type="bibr" rid="B119">Kim and Baek, 2018</xref>) (<xref ref-type="fig" rid="F4">Figure 4</xref>). Although ubiquitination is important for proteasome-dependent degradation, it is also necessary to facilitate signalling (<xref ref-type="bibr" rid="B2">Adhikari et al., 2007</xref>). For instance, K63-linked polyubiquitination functions as a scaffold to recruit and activate protein kinase complexes (<xref ref-type="bibr" rid="B286">Yamashita et al., 2008</xref>). As previously discussed, ubiquitin ligases catalyze K63-linked polyubiquitin chains on TRAF6 to recruit TAK1 to facilitate Smad-independent TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B135">Landstr&#xf6;m, 2010</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>The effect of the ubiquitin-proteasome pathway on TGF&#x3b2; signalling. Transforming growth factor-&#x3b2; (TGF&#x3b2;) signalling is tightly regulated by the ubiquitin-proteasome pathway. After TGF&#x3b2; binds to the TGF&#x3b2;-receptors, the ubiquitin-proteasome pathway is activated to prevent uncontrolled TGF&#x3b2; signalling. E1 activating enzymes hydrolases ATP to bind to ubiquitin. Ubiquitin is then transferred to an E2 conjugating enzyme. Smad7 binds to E3 ubiquitin ligases, which conjugates ubiquitin to TGF&#x3b2; receptors, receptor Smads (R-Smads), Smad4, and R-Smad-Smad4 complexes. This process is repeated until TGF&#x3b2; receptors, R-Smads, Smad4 or R-Smad-Smad4 complexes are polyubiquitinated. Polyubiquitinated components of the TGF&#x3b2; pathway are then subject to (1) proteasome-dependent degradation or (2) the removal of the ubiquitin-linked chains mediated by deubiquitinating enzymes (DUBs).</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g004.tif"/>
</fig>
<p>Given that TGF&#x3b2; signalling regulates a diverse set of cellular processes, modulating TGF&#x3b2; signalling through a balance of ubiquitin ligase and deubiquitinating enzyme activity is important (<xref ref-type="bibr" rid="B252">Ten Dijke and Hill, 2004</xref>). By degrading TGF&#x3b2; receptors, R-Smads, and downstream effectors, E3 ubiquitin ligases, protects cells from aberrant TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B68">Gao et al., 2009</xref>). However, there are numerous examples where ubiquitin ligases prolong TGF&#x3b2; signalling. For instance, Smad2-Smurf2 complexes lead to the destruction of Ski-related protein N (SnoN) and Ski, which are protooncogenes that impede TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B243">Sun et al., 1999</xref>; <xref ref-type="bibr" rid="B23">Bonni et al., 2001</xref>). Arkadia, an E3 ubiquitin ligase, amplifies TGF&#x3b2; signalling by ubiquitinating I-Smads (<xref ref-type="bibr" rid="B126">Koinuma et al., 2003</xref>). Paradoxically, if deubiquitinating enzymes remove K48-linked polyubiquitin chains on SnoN, Ski or Smad7, TGF&#x3b2; signalling is dampened (<xref ref-type="bibr" rid="B303">Zhao et al., 2011</xref>). Therefore, ubiquitin ligases and deubiquitinating enzymes may both antagonize or promote TGF&#x3b2; signalling depending on the function of the ubiquitinated protein.</p>
</sec>
</sec>
<sec id="s3">
<title>Mutations in genes involved in TGF&#x3b2; signalling</title>
<p>Alterations in the TGF&#x3b2; signalling pathway due to genetic mutations are the underlying cause of various hereditary congenital malformations, as well as diseases that arise later in life (<xref ref-type="bibr" rid="B271">Wang et al., 2012</xref>; <xref ref-type="bibr" rid="B225">Saito et al., 2018</xref>). Germline mutations impair embryonic development, whereas increased susceptibility to develop cancer is associated with somatic mutations (<xref ref-type="bibr" rid="B85">Harradine and Akhurst, 2006</xref>). The clinical consequences of mutations in the TGF&#x3b2; signalling pathway are complex, because the tumour microenvironment and TGF&#x3b2; signalling vary among patients and among different tissues within the same individual (<xref ref-type="bibr" rid="B168">Massagu&#xe9;, 2008</xref>).</p>
<sec id="s3-1">
<title>Germline mutations in the TGF&#x3b2; signalling pathway</title>
<p>Genetically engineered mouse models with targeted inactivation of various TGF&#x3b2; ligands have been generated to investigate the importance of TGF&#x3b2; on development and viability (<xref ref-type="bibr" rid="B72">Glick, 2012</xref>). <italic>Tgfb1</italic>
<sup>
<italic>&#x2212;/&#x2212;</italic>
</sup> mice can either succumb during mid-gestation as a result of vascular and hematopoiesis defects, or a few weeks after as a consequence of systemic inflammation (<xref ref-type="bibr" rid="B238">Shull et al., 1992</xref>; <xref ref-type="bibr" rid="B132">Kulkarni et al., 1993</xref>; <xref ref-type="bibr" rid="B50">Dickson et al., 1995</xref>). Death occurs shortly before, during or within minutes of birth in <italic>Tgfb2</italic>
<sup>
<italic>&#x2212;/&#x2212;</italic>
</sup> mice, due to impaired cardiovascular function. These animals exhibit cardiac, craniofacial, limb, eye, inner ear, and urogenital defects (<xref ref-type="bibr" rid="B226">Sanford et al., 1997</xref>; <xref ref-type="bibr" rid="B52">D&#xfc;nker and Krieglstein, 2002</xref>). <italic>Tgfb3</italic>
<sup>
<italic>&#x2212;/&#x2212;</italic>
</sup> mice exhibit cleft palates that interfere with feeding, eventually resulting in death (<xref ref-type="bibr" rid="B52">D&#xfc;nker and Krieglstein, 2002</xref>; <xref ref-type="bibr" rid="B5">Aluwihare et al., 2009</xref>). The majority of <italic>Smad</italic>-null mice die <italic>in utero</italic>, indicating that Smad proteins are required for proper embryonic development as previously reviewed (<xref ref-type="bibr" rid="B41">Datto and Wang, 2000</xref>). Specifically, <italic>Smad2</italic>
<sup>
<italic>&#x2212;/&#x2212;</italic>
</sup> and <italic>Smad4</italic>
<sup>&#x2212;/&#x2212;</sup> mice die early in embryogenesis, due to defects in the organization of the primitive germ layers and extensive mesodermal defects (<xref ref-type="bibr" rid="B197">Nomura and Li, 1998</xref>; <xref ref-type="bibr" rid="B35">Chu et al., 2004</xref>). <italic>Smad3</italic>
<sup>
<italic>&#x2212;/&#x2212;</italic>
</sup> mice are viable, but exhibit impaired local inflammatory responses and accelerated wound healing (<xref ref-type="bibr" rid="B7">Ashcroft et al., 1999</xref>; <xref ref-type="bibr" rid="B151">Ling and Robinson, 2002</xref>).</p>
<p>In patients, familial juvenile polyposis, which increases the risk of gastrointestinal cancer, is correlated with <italic>SMAD4</italic> mutants that produce truncated proteins with a loss or partial loss of function (<xref ref-type="bibr" rid="B95">Howe et al., 1998</xref>; <xref ref-type="bibr" rid="B108">Johansson et al., 2015</xref>). Although juvenile polyposis patients have been screened for <italic>SMAD2</italic> and <italic>SMAD3</italic> mutations, only <italic>SMAD4</italic> germline mutants are identified as an underlying cause of juvenile polyposis (<xref ref-type="bibr" rid="B18">Bevan et al., 1999</xref>). However, screening colorectal adenoma patients revealed that mutations to the <italic>SMAD4</italic> loci are rare (<xref ref-type="bibr" rid="B153">Lipton et al., 2003</xref>). <italic>SMAD4</italic> mutations in patients with juvenile polyposis syndrome may also develop hereditary hemorrhagic telangiectasia, which results in abnormal vascular structures (<xref ref-type="bibr" rid="B89">Heald et al., 2015</xref>).</p>
</sec>
<sec id="s3-2">
<title>Somatic mutations in the TGF&#x3b2; signalling pathway</title>
<p>Frameshift and missense mutations in <italic>TGFBRI</italic> are common in several tumour types (<xref ref-type="bibr" rid="B186">Moore-Smith and Pasche, 2011</xref>). For example, the <italic>TGFBRI&#x2a;6A</italic> mutation in exon one is a loss of three Alanine residues in a 9-Alanine repeat region that increases cancer susceptibility associated with impaired anti-proliferative TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B145">Liao et al., 2010</xref>). Inactivating mutations in <italic>TGFBR2</italic> are frequently present in tumours that exhibit microsatellite instability (<xref ref-type="bibr" rid="B264">Vincent et al., 1996</xref>), such as those found in subsets of colon carcinomas, which express truncated mutant forms of TGF&#x3b2;R2 (<xref ref-type="bibr" rid="B200">Ogino et al., 2007</xref>). <italic>SMAD4</italic> is the most common Smad family gene mutated in malignant tumours (<xref ref-type="bibr" rid="B230">Sarshekeh et al., 2017</xref>). Inactivating <italic>SMAD4</italic> mutations have been found in approximately 50% of pancreatic adenocarcinomas (<xref ref-type="bibr" rid="B95">Howe et al., 1998</xref>), 20% of colorectal carcinomas (<xref ref-type="bibr" rid="B35">Chu et al., 2004</xref>), and 5% of head and neck squamous cell carcinomas (<xref ref-type="bibr" rid="B148">Lin et al., 2019a</xref>). Smad4 mutations also correlate with tumour formation (<xref ref-type="bibr" rid="B149">Lin et al., 2019b</xref>) and may predict poor prognosis and aggressive tumour phenotypes (<xref ref-type="bibr" rid="B56">Fang et al., 2021</xref>). For instance, mice with conditional targeted inactivation of <italic>Smad4</italic> in the oral epithelium developed spontaneous squamous cell carcinomas (<xref ref-type="bibr" rid="B24">Bornstein et al., 2009</xref>). Although somatic mutations of the TGF&#x3b2; pathway may promote tumour formation, similar mutations in cancerous cells that rely on TGF&#x3b2; can decrease tumour growth (<xref ref-type="bibr" rid="B209">Pino et al., 2010</xref>). Since somatic mutations of the TGF&#x3b2; pathway may promote or block tumourigenesis depending on the stage of the disease, this is important to bear in mind when assessing the benefits and risks of using TGF&#x3b2; signalling inhibitors in cancer treatment (<xref ref-type="bibr" rid="B117">Khoshakhlagh et al., 2019</xref>).</p>
</sec>
</sec>
<sec id="s4">
<title>TGF&#x3b2; signalling in tumourigenesis</title>
<p>Cells escape the tumour suppressing arms of TGF&#x3b2; signalling through mutations that impede specific TGF&#x3b2; pathways or abnormalities in processes that dampen TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B42">David and Massagu&#xe9;, 2018</xref>). Functional inactivation of the tumour suppressing arms of TGF&#x3b2; signalling can contribute to carcinogenesis through various mechanisms (<xref ref-type="bibr" rid="B168">Massagu&#xe9;, 2008</xref>; <xref ref-type="bibr" rid="B42">David and Massagu&#xe9;, 2018</xref>). Major mechanisms that contribute to the pro-tumourigenic effects of TGF&#x3b2; include inhibition of immune function, activation of angiogenesis/lymphangiogenesis, and the initiation of EMT (<xref ref-type="bibr" rid="B60">Ferrari et al., 2009</xref>; <xref ref-type="bibr" rid="B63">Flavell et al., 2010</xref>; <xref ref-type="bibr" rid="B13">Batlle and Massagu&#xe9;, 2019</xref>).</p>
<sec id="s4-1">
<title>Inhibition of anti-cancer immune responses</title>
<p>As prolonged activation of the immune system can induce inflammation and tissue damage, the immune system is modulated through inhibitory mechanisms (<xref ref-type="bibr" rid="B239">Sitkovsky and Ohta, 2005</xref>). Cells in the tumour and its microenvironment benefit from these immunological safeguards by producing excessive amounts of immunosuppressive cytokines, such as TGF&#x3b2; (<xref ref-type="bibr" rid="B63">Flavell et al., 2010</xref>; <xref ref-type="bibr" rid="B13">Batlle and Massagu&#xe9;, 2019</xref>). TGF&#x3b2; inhibits many components of both the innate and adaptive immune systems, which creates an environment favourable for tumour growth (<xref ref-type="bibr" rid="B184">Moo-Young et al., 2009</xref>).</p>
<p>Tumour cells are targeted for destruction by cells of the innate immune system, which include monocytes, macrophages, dendritic cells, neutrophils, basophils, eosinophils, and NK cells (<xref ref-type="bibr" rid="B66">Gajewski et al., 2013</xref>). Through phagocytosis, macrophages, neutrophils, and dendritic cells engulf tumour cell debris and tumour cells missing essential cell surface proteins or expressing danger signals (<xref ref-type="bibr" rid="B31">Chan and Housseau, 2008</xref>; <xref ref-type="bibr" rid="B228">Sarode and Sarode, 2014</xref>; <xref ref-type="bibr" rid="B304">Zhou et al., 2021</xref>). Macrophages, neutrophils, and dendritic cells also attach antigens to their major histocompatibility complexes (MHCs) to activate T- and B- lymphocytes (T- and B-cells) of the adaptive immune system (<xref ref-type="fig" rid="F5">Figure 5</xref>) (<xref ref-type="bibr" rid="B66">Gajewski et al., 2013</xref>). The effects of TGF&#x3b2; on dendritic cells include interference with antigen presenting activity, immobilization, and upregulation of TGF&#x3b2; production, creating a positive feedback loop to maintain a decrease in immune responses against the tumour (<xref ref-type="bibr" rid="B54">Esebanmen and Langridge, 2017</xref>). Furthermore, by interfering with dendritic cell antigen presenting activity, TGF&#x3b2; blocks naive T-cell and B-cell differentiation into anti-tumour phenotypes (<xref ref-type="bibr" rid="B155">Liu et al., 2018</xref>). TGF&#x3b2; within the tumour microenvironment may manipulate macrophages and neutrophils to differentiate into phenotypes that contributes to tumour growth rather than destroy tumour cells. These macrophages and neutrophils are typically referred to as tumour-associated macrophages (TAMs) and tumour-associated neutrophils (TANs), respectively (<xref ref-type="bibr" rid="B65">Fridlender et al., 2009</xref>; <xref ref-type="bibr" rid="B40">Danhier et al., 2017</xref>). TGF&#x3b2;-recruited TAMs can phagocytose antigen-containing particles prior to their recognition by dendritic cells. Therefore, TAMs suppress the antigen presenting abilities of dendritic cells, hindering activation of the adaptive immune system (<xref ref-type="bibr" rid="B155">Liu et al., 2018</xref>; <xref ref-type="bibr" rid="B13">Batlle and Massagu&#xe9;, 2019</xref>). TGF&#x3b2; recruited TANs have decreased cytotoxicity and secrete extensive quantities of MMPs to free TGF&#x3b2; from large latent TGF&#x3b2; complexes, which increases the concentration of active TGF&#x3b2; ligands in the tumour microenvironment, contributing to a positive feedback loop (<xref ref-type="fig" rid="F6">Figure 6</xref>) (<xref ref-type="bibr" rid="B71">Germann et al., 2020</xref>).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Tumour recognition and destruction mediated by the innate and adaptive immune systems. Tumour cells release antigens and danger signals that serve as a chemotactic gradient to recruit cells of the innate immune system ((Natural Killer (NK) cells, macrophages, dendritic cells, and granulocytes (neutrophils, basophils, and eosinophils)). Cells of the innate immune system may destroy tumours using cytolytic/phagocytic functions or activate the adaptive immune system. The adaptive immune system is activated by humoral signals, such as interferon-&#x3b3; (IFN&#x3b3;), which is released by NK cells, dendritic cells, and macrophages. Furthermore, antigen presenting macrophages and dendritic cells deliver tumour antigens using the major histocompatibility complex to Naive T-lymphocytes (T-cells) or B-lymphocytes (B-cells). Naive T-cells are stimulated to differentiate into Cytotoxic T-cells and Helper T-cells. B-cell differentiation into cytotoxic antibody-producing plasma cells is triggered by B-cell receptors binding to Helper T-cells or tumour antigens. The adaptive immune system facilitates tumour destruction <italic>via</italic> Cytotoxic T-cells releasing enzymes into tumour cells or antibodies produced by plasma cells.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g005.tif"/>
</fig>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>The inhibition of anti-cancer immune responses by TGF&#x3b2;. In the absence of immunosuppressive cytokines, cells of the innate and adaptive immune system destroy tumour cells as described in <xref ref-type="fig" rid="F7">Figure 7</xref>. However, the addition of transforming growth factor-&#x3b2; (TGF&#x3b2;) suppresses tumour recognition and cytotoxic functions of the innate and adaptive immune systems. For instance, TGF&#x3b2; suppresses antigen presenting function of macrophages, neutrophils, and dendritic cells by downregulation the major histocompatibility complex. TGF&#x3b2; decreases Natural Killer cell receptors, which spares tumour cells from Natural Killer cell-mediated destruction. TGF&#x3b2; dampens immune cell recruitment by disrupting interferon-&#x3b3; (IFN&#x3b3;) production in Natural Killer cells, dendritic cells, and macrophages. TGF&#x3b2; induces macrophages and neutrophils to differentiate into tumour-associated macrophages and tumour-associated neutrophils, respectively, which augment tumourigenesis. TGF&#x3b2; disrupts B-cell differentiation into plasma cells and attenuates antibody production. TGF&#x3b2; also alters Naive T-cell differentiation to favour tumour promoting Regulatory T-cells instead of Cytotoxic T-cells or Helper T-cells that mediate tumour cell destruction. Regulatory T-cells promote tumourigenesis by suppressing Cytotoxic T-cell function.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g006.tif"/>
</fig>
<p>NK cells are specialized leukocytes that do not rely on MHCs or humoral signals to recognize tumour cells (<xref ref-type="bibr" rid="B1">Abel et al., 2018</xref>). Instead, NK cells recognize tumour cells using cell surface receptors. Upon binding to tumour cells, NK cells release interferon-&#x3b3; (IFN&#x3b3;) into the tumour microenvironment and cytolytic antibodies directly into the tumour cell (<xref ref-type="bibr" rid="B29">Castro et al., 2018</xref>). Thus, NK cells eliminate tumour cells by triggering an antibody-dependent cell-mediated cytotoxic response and activate other leukocytes using IFN&#x3b3; (<xref ref-type="fig" rid="F5">Figure 5</xref>) (<xref ref-type="bibr" rid="B1">Abel et al., 2018</xref>). TGF&#x3b2; blocks NK cell-mediated adaptive immune system activation by downregulating the transcription factor T-bet, leading to reduced IFN&#x3b3; expression (<xref ref-type="bibr" rid="B86">Hayashi et al., 2003</xref>; <xref ref-type="bibr" rid="B183">Mohammadzadeh et al., 2014</xref>). The TGF&#x3b2;-dependent loss of IFN&#x3b3; decreases the activity of leukocytes, downregulates antigen presenting MHCs in antigen presenting leukocytes, and impedes chemotaxis (<xref ref-type="bibr" rid="B29">Castro et al., 2018</xref>). TGF&#x3b2; also downregulates NK receptors responsible for recognizing and destroying tumour cells (<xref ref-type="fig" rid="F6">Figure 6</xref>) (<xref ref-type="bibr" rid="B28">Castriconi et al., 2003</xref>).</p>
<p>Like the innate immune system, the adaptive immune system facilitates tumour cell death using humoral immunity and cell-mediated immunity. Cell-mediated immunity and humoral immunity is facilitated by T-cells. Following antigen presentation, naive T-cells differentiate into effector T-cells, such as cytotoxic T-cells and helper T-cells (<xref ref-type="bibr" rid="B58">Fazilleau et al., 2009</xref>; <xref ref-type="bibr" rid="B57">Farhood et al., 2019</xref>). Cytotoxic T-cells specifically eliminate cells expressing the antigen presented whereas helper T-cells release humoral signals to activate other leukocytes (<xref ref-type="fig" rid="F5">Figure 5</xref>) (<xref ref-type="bibr" rid="B15">Belardelli and Ferrantini, 2002</xref>; <xref ref-type="bibr" rid="B58">Fazilleau et al., 2009</xref>). In tumour microenvironments with elevated TGF&#x3b2; levels, decreased numbers and limited anti-tumour cytolytic activity of cytotoxic T-cells have been observed, through mechanisms that include induction of T-cell apoptosis (<xref ref-type="bibr" rid="B253">Thomas and Massagu&#xe9;, 2005</xref>; <xref ref-type="bibr" rid="B63">Flavell et al., 2010</xref>; <xref ref-type="bibr" rid="B155">Liu et al., 2018</xref>). TGF&#x3b2; also disrupts T-cell anti-tumourigenic activity by upregulating genes that promote naive T-cell differentiation into less cytotoxic phenotypes, such as Tregs (<xref ref-type="fig" rid="F6">Figure 6</xref>) (<xref ref-type="bibr" rid="B296">Zhang et al., 2018</xref>). Plasma cells are adaptive immune system cells that mediate humoral immunity. Upon antigen presentation, B-cells differentiate into plasma cells that produce antibodies to eliminate tumour cells (<xref ref-type="fig" rid="F5">Figure 5</xref>) (<xref ref-type="bibr" rid="B134">Kurosaki et al., 2015</xref>). TGF&#x3b2; attenuates the anti-tumourigenic capacity of B-cells by interfering with their differentiation into plasma cells, antibody production, and proliferation (<xref ref-type="fig" rid="F6">Figure 6</xref>) (<xref ref-type="bibr" rid="B232">Schwartz et al., 2016</xref>).</p>
</sec>
<sec id="s4-2">
<title>Activation of angiogenesis and lymphangiogenesis</title>
<p>Angiogenesis promotes tumour growth and invasion because as tumours grow, blood carrying oxygen and nutrients is blocked from reaching interior tumour cells (<xref ref-type="bibr" rid="B194">Nishida et al., 2006</xref>). To bypass this, tumour microenvironments are enriched with cytokines, such as TGF&#x3b2;, that alter cellular processes within endothelial cells and mural cells to generate new vessels (<xref ref-type="fig" rid="F7">Figure 7A</xref>) (<xref ref-type="bibr" rid="B60">Ferrari et al., 2009</xref>). The effects of TGF&#x3b2; on angiogenesis, endothelial cells, and on mural cells are complex. Although in normal vessels TGF&#x3b2; supports vascular development by recruiting mural cells toward endothelial cells (<xref ref-type="bibr" rid="B266">Walshe et al., 2009</xref>), TGF&#x3b2; in tumour vasculature induces the differentiation of endothelial cells into mural cells (<xref ref-type="bibr" rid="B92">Hirschi et al., 2003</xref>). Then, mural cells secrete angiogenic factors and form defective interactions with endothelial cells resulting in disorganized vasculature (<xref ref-type="bibr" rid="B242">Sun et al., 2021</xref>). In endothelial cells, binding of TGF&#x3b2; to TGFBRII leads to the activation of two distinct type I receptors: endothelial cell-specific activin receptor-like kinase 1, which signals through Smad1/5/8, as well as the ubiquitous TGF&#x3b2;RI, which signals through Smad2/3 (<xref ref-type="bibr" rid="B37">COLLETTA et al., 1988</xref>; <xref ref-type="bibr" rid="B75">Goumans et al., 2002</xref>; <xref ref-type="bibr" rid="B164">Mallet et al., 2006</xref>; <xref ref-type="bibr" rid="B102">Ito et al., 2009</xref>). Smad1/5/8 signalling induces endothelial cell proliferation and migration (<xref ref-type="bibr" rid="B222">Ray et al., 2010</xref>), whereas Smad2/3 signalling induces endothelial cell differentiation into mesenchymal-like mural cells (<xref ref-type="bibr" rid="B92">Hirschi et al., 2003</xref>; <xref ref-type="bibr" rid="B106">Jiang et al., 2018</xref>). TGF&#x3b2; can promote angiogenesis through TGF&#x3b2;RI, but inhibits growth factor-induced endothelial sprouting/branching through mechanisms that involve cross-talk with Notch-activated pathways (<xref ref-type="bibr" rid="B164">Mallet et al., 2006</xref>; <xref ref-type="bibr" rid="B8">Aspalter et al., 2015</xref>). In mural cells and endothelial cells, TGF&#x3b2; also induces Smad-dependent expression of vascular endothelial growth factor (VEGF), thrombospondin-4 (TSP-4), MMPs, microRNA-29a, and other genes that stimulate endothelial cell proliferation and migration (<xref ref-type="bibr" rid="B168">Massagu&#xe9;, 2008</xref>; <xref ref-type="bibr" rid="B60">Ferrari et al., 2009</xref>).</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>TGF&#x3b2; augments tumourigenesis by inducing angiogenesis. <bold>(A)</bold> As tumours grow, the concentration of transforming growth factor-&#x3b2; (TGF&#x3b2;) in the tumour microenvironment increases. TGF&#x3b2; upregulates genes involved with proliferation and migration in mural cells, which results in endothelial cell migration and leaky vessels. TGF&#x3b2; binds to TGF&#x3b2; receptors on endothelial cells to upregulate vascular endothelial growth factor (VEGF) and matrix metalloproteinases (MMPs). Both proteins are secreted into the basal lamina and increase proportionally to TGF&#x3b2;. VEGF binds to endothelial cells and stimulates proliferation and migration. MMPs breakdown proteins in the basal lamina to remodel the extracellular matrix (ECM) to carve out space for vessel formation. The new vessels grow and become more organized as time passes. <bold>(B)</bold> TGF&#x3b2; binds to TGF&#x3b2; receptors on endothelial cells and upregulate MMP2, MMP9, thrombospondin-4 (TSP-4), microRNA-29s (miR-29a), VEGF, and protein kinase B (AKT). miR-29a blocks the translation of phosphatase and tensin homolog (PTEN), which is a known AKT inhibitor. Since the AKT pathway has been linked to angiogenesis, TGF&#x3b2; signalling may induce angiogenesis through the AKT pathway.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g007.tif"/>
</fig>
<p>VEGF enhances endothelial cell migration, proliferation, and resistance to apoptosis (<xref ref-type="bibr" rid="B60">Ferrari et al., 2009</xref>; <xref ref-type="bibr" rid="B246">Suzuki et al., 2012</xref>) by activating two tyrosine kinase VEGF receptors (VEGFR1 and VEGFR2). VEGFR1 activation is involved with migration whereas VEGFR2 activation regulates proliferation and survival (<xref ref-type="bibr" rid="B269">Wang et al., 2017</xref>). Interestingly, TGF&#x3b2; activates apoptosis, which suggests that VEGF and TGF&#x3b2; have opposing roles on endothelial cell survival. However, many studies suggest that pro-apoptotic TGF&#x3b2; signalling is necessary for angiogenesis because it ensures less branching and increases vasculature organization (<xref ref-type="bibr" rid="B84">Haque and Morris, 2017</xref>). Furthermore, TGF&#x3b2; upregulates ECM remodelling proteins in endothelial cells, such as TSP-4 and MMPs (<xref ref-type="bibr" rid="B254">Tirino et al., 2013</xref>; <xref ref-type="bibr" rid="B192">Muppala et al., 2017</xref>). By a Smad3-dependent mechanism, TGF&#x3b2; activates post-translation processes that increase TSP-4 protein levels (<xref ref-type="bibr" rid="B192">Muppala et al., 2017</xref>). The importance of TSP-4 on endothelial cell proliferation and migration during angiogenesis was verified when TGF&#x3b2;-induced angiogenesis was attenuated in <italic>Tsp-4</italic>
<sup>&#x2212;/&#x2212;</sup> mouse models (<xref ref-type="bibr" rid="B192">Muppala et al., 2017</xref>). Additionally, TGF&#x3b2; upregulates the expression of MMP2 and MMP9 in endothelial cells and cells of the tumour microenvironment, thus facilitating ECM remodelling and releasing ECM-sequestered cytokines (<xref ref-type="bibr" rid="B293">Yu and Stamenkovic, 2000</xref>). Therefore, MMPs play a role in TGF&#x3b2;-mediated angiogenesis by releasing latent TGF&#x3b2; from LAP and LTBP (<xref ref-type="bibr" rid="B250">Tatti et al., 2008</xref>) as well as generating the space required for endothelial cell migration, proliferation, and microvessel formation (<xref ref-type="bibr" rid="B205">Park et al., 2018</xref>). Finally, microRNA-29a silences phosphatase and tensin homolog (PTEN) RNA expression (<xref ref-type="bibr" rid="B267">Wang et al., 2013</xref>), leading to increased AKT pathway activity and activation of TGF&#x3b2;-induced angiogenesis (<xref ref-type="bibr" rid="B33">Chen et al., 2020</xref>). Since blocking PTEN activity increases the activity of the AKT pathway (<xref ref-type="bibr" rid="B33">Chen et al., 2020</xref>), the Smad-independent PI3K/AKT TGF&#x3b2; signalling pathway may play a major role in TGF&#x3b2;-induced angiogenesis (<xref ref-type="fig" rid="F7">Figure 7B</xref>).</p>
<p>Tumour cells primarily metastasize through the lymphatic system due to the thinner walls and increased permeability of lymphatic vessels, relative to blood vasculature (<xref ref-type="bibr" rid="B30">Chaffer et al., 2016</xref>). Furthermore, cancer cells may drain directly into the lymphatic system if they break free from tumours (<xref ref-type="bibr" rid="B110">Karlsson et al., 2017</xref>). Two mechanisms for TGF&#x3b2; contribution to metastasis through the lymphatic system have been proposed. Due to the greater representation of leukocytes in the lymphatic system, lymph node metastasis requires immune suppression (<xref ref-type="bibr" rid="B156">Liu and Cao, 2016</xref>). Therefore, the inhibitory effects of TGF&#x3b2; on leukocytes present in the lymphatic system may promote tumour cell survival and increases dissemination (<xref ref-type="bibr" rid="B156">Liu and Cao, 2016</xref>). Additionally, Smad-dependent and -independent TGF&#x3b2; signalling induces lymphangiogenesis, formation of new lymphatic vessels from pre-existing lymphatic vessels (<xref ref-type="bibr" rid="B69">Garc&#xed;a-Caballero et al., 2017</xref>), by upregulating VEGF-C, which in turn promotes growth, proliferation, migration, and survival of endothelial cells bordering lymphatic vessels (<xref ref-type="bibr" rid="B203">Pak et al., 2019</xref>). Cells of the tumour microenvironment that respond to TGF&#x3b2;, such as TAMs, may also mediate lymphangiogenesis <italic>via</italic> a VEGF receptor 3-dependent process (<xref ref-type="bibr" rid="B3">Alishekevitz et al., 2016</xref>).</p>
</sec>
<sec id="s4-3">
<title>Epithelial-mesenchymal transition (EMT)</title>
<p>Epithelial-mesenchymal transition (EMT), a biological process whereby cells of epithelial origin acquire characteristics of mesenchymal cells, is essential for embryogenesis and wound healing (<xref ref-type="bibr" rid="B248">Tan et al., 2015</xref>; <xref ref-type="bibr" rid="B30">Chaffer et al., 2016</xref>). EMT is involved in the ability of carcinoma cells to acquire motile and invasive phenotypes, thus contributing to tumour progression and metastasis (<xref ref-type="bibr" rid="B38">Craene and Berx, 2013</xref>). During EMT, there is a loss of epithelial properties, such as apical/basolateral polarity, cytoskeleton polarization, cell-cell adhesions (adherens junctions, tight junctions, and gap junctions), and attachment to the basal lamina. Subsequently, the cells acquire spindle-shaped morphology, transient focal point cell-cell attachments, lamellipodia/filopodia formation, front-back polarity, stress fibers, and increased motility (<xref ref-type="fig" rid="F8">Figure 8</xref>) (<xref ref-type="bibr" rid="B30">Chaffer et al., 2016</xref>; <xref ref-type="bibr" rid="B110">Karlsson et al., 2017</xref>).</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>Epithelial-mesenchymal transition. Epithelial-mesenchymal transition (EMT) is the biological process of an epithelial cell loses its epithelial properties, such as apical/basolateral polarity, tight junctions, gap junctions, adherens junctions, and hemidesmosomes, and develop mesenchymal properties, which includes the capacity to breakdown the basal lamina, assert back/front polarity, spindle-shaped morphology, induce stress fiber formation, and N-Cadherin-dependent cell-cell attachments.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g008.tif"/>
</fig>
<p>The profound phenotypical and morphological characteristics observed during EMT are amplified by signals that tumour cells receive from the tumour microenvironment, such as TGF&#x3b2; (<xref ref-type="bibr" rid="B115">Kawata et al., 2012</xref>). TGF&#x3b2; contributes to the initiation of the EMT program, <italic>via</italic> transcription-dependent and -independent mechanisms (<xref ref-type="bibr" rid="B79">Gunaratne and DiGuglielmo, 2013</xref>; <xref ref-type="bibr" rid="B254">Tirino et al., 2013</xref>; <xref ref-type="bibr" rid="B67">Ganesan et al., 2016</xref>; <xref ref-type="bibr" rid="B260">Tripathi et al., 2019</xref>). TGF&#x3b2; upregulates various EMT-transcription factors (SNAIL, SLUG, TWIST, ZEB1, ZEB2, FOXC2, FOXA1, FOXA2, PRX1, and HMGA2), which decrease the expression of epithelial genes, whilst increasing that of mesenchymal genes (<xref ref-type="fig" rid="F9">Figure 9</xref>) (<xref ref-type="bibr" rid="B12">Barrallo-Gimeno and Nieto, 2005</xref>; <xref ref-type="bibr" rid="B127">Kokudo et al., 2008</xref>; <xref ref-type="bibr" rid="B133">Kume, 2008</xref>; <xref ref-type="bibr" rid="B182">Miyazono, 2009</xref>; <xref ref-type="bibr" rid="B283">Xu et al., 2009</xref>; <xref ref-type="bibr" rid="B178">Mikheeva et al., 2010</xref>; <xref ref-type="bibr" rid="B140">Lee and Yutzey, 2011</xref>; <xref ref-type="bibr" rid="B279">Wu et al., 2011</xref>; <xref ref-type="bibr" rid="B113">Kaufhold and Bonavida, 2014</xref>; <xref ref-type="bibr" rid="B67">Ganesan et al., 2016</xref>; <xref ref-type="bibr" rid="B196">Niu et al., 2016</xref>; <xref ref-type="bibr" rid="B112">Katsura et al., 2017</xref>; <xref ref-type="bibr" rid="B265">Vu and Datta, 2017</xref>; <xref ref-type="bibr" rid="B173">Maturi et al., 2018</xref>; <xref ref-type="bibr" rid="B9">Atala, 2019</xref>; <xref ref-type="bibr" rid="B241">Stemmler et al., 2019</xref>)<bold>.</bold> For example, SNAIL, SLUG, and ZEB1 downregulate the expression of E-Cadherin, a protein required for strong adherens junctions observed in epithelial cells, whereas TWIST upregulates the expression of N-Cadherin, a mesenchymal protein that forms weak transient cell-cell interactions (<xref ref-type="bibr" rid="B12">Barrallo-Gimeno and Nieto, 2005</xref>; <xref ref-type="bibr" rid="B178">Mikheeva et al., 2010</xref>; <xref ref-type="bibr" rid="B49">Dhasarathy et al., 2011</xref>; <xref ref-type="bibr" rid="B140">Lee and Yutzey, 2011</xref>; <xref ref-type="bibr" rid="B113">Kaufhold and Bonavida, 2014</xref>; <xref ref-type="bibr" rid="B173">Maturi et al., 2018</xref>). An in-depth analysis of genes targeted by EMT-transcription factors that mediate the transition of epithelial to mesenchymal phenotypes are outlined in previous reviews (<xref ref-type="bibr" rid="B277">Wrana, 2013</xref>; <xref ref-type="bibr" rid="B13">Batlle and Massagu&#xe9;, 2019</xref>).</p>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>TGF&#x3b2; signalling pathways that induce epithelial-mesenchymal transition. As the concentration of transforming growth factor-&#x3b2; (TGF&#x3b2;) increases, the epithelial-mesenchymal transition (EMT) program becomes more pronounced. After TGF&#x3b2; binds to the TGF&#x3b2; receptors, it upregulates EMT-transcription factors (EMT-TFs), such as Snail Family Transcriptional Repressor one and 2 (SNAIL/SLUG), Zinc Finger E-box Binding Homeobox one and 2 (ZEB1/ZEB2), Twist-related Protein 1 (TWIST1), Forkhead box C2 (FOXC2), Forkhead box A1 (FOXA1), Forkhead box A2 (FOXA2), Paired-related Homeobox 1 (PRX1), and High Mobility Group AT-hook 2 (HMGA2). EMT-TFs downregulate epithelial markers ((E-Cadherin, claudins, occludins, cytokeratins, integrins, microRNA (miR)-34, and miR-200)) and upregulate mesenchymal markers ((N-Cadherin, vimentin, matrix metalloproteinases (MMPs), fibronectin, &#x3b1;-smooth muscle actin (&#x3b1;-SMA), and miR-21)). TGF&#x3b2; induces EMT by increasing DNA methyltransferase activity. In the presence of TGF&#x3b2;, DNA methyltransferase methylates (M) the promoters of epithelial genes, such as <italic>Cadherin 1</italic>(<italic>CDH1</italic>). Also, when TGF&#x3b2; receptor type I phosphorylates Smad3 at threonine 179 (T179-Smad3), it may associate with the RNA-binding protein poly (RC) binding protein 1 (PCBP1). Smad3-PCBP1 complexes alter CD44 splicing from CD44E, which is found in epithelial cells, to CD44s. CD44s splice variants modulate cell-cell adhesion to promote EMT. The Smad3-PCBP1 complex associated with Rbfox2 that mediates alternative splicing of TGF&#x3b2;-activated kinase 1 (TAK1) to favour TAK1&#x394;Glu 12 (TAK1&#x394;E12) variants. TAK1&#x394;E12 is constitutively active, which leads to the constitutive phosphorylation of p38 MAPK (p38) and cJun N-terminal Kinase (JNK). P38 and JNK upregulate genes that promote EMT.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g009.tif"/>
</fig>
<p>TGF&#x3b2; can promote EMT through non-canonical, Smad3-dependent regulation of RNA splicing. Phosphorylation of Smad3 on Thr179, subsequent to TGF&#x3b2; receptor stimulation, impairs binding to Smad4 and to DNA (<xref ref-type="bibr" rid="B68">Gao et al., 2009</xref>; <xref ref-type="bibr" rid="B99">Inui et al., 2011</xref>; <xref ref-type="bibr" rid="B249">Tang et al., 2011</xref>), but induces Smad3 association with the RNA-binding protein poly (RC) binding protein 1 (PCBP1) in the nucleus (<xref ref-type="bibr" rid="B261">Tripathi and Zhang, 2017</xref>). The Smad3-PCBP1 species catalyzes alternative splicing of myriad transcripts involved in EMT, including RNAs encoding the CD44 glycoprotein, which modulates cell-cell adhesion (<xref ref-type="bibr" rid="B214">Ponta et al., 2003</xref>). Multiple CD44 splice variants exist. CD44E is preferentially expressed in normal epithelial cells, whereas the mesenchymal isoform CD44s is ubiquitous. In epithelial carcinoma cells, Smad3-PCBP1 complexes induce a splicing switch from CD44E to CD44s, resulting in activation of EMT and invasion (<xref ref-type="bibr" rid="B253">Thomas and Massagu&#xe9;, 2005</xref>). Similarly, complex formation between Smad3, PCBP1, and the RNA-binding protein Rbfox2 mediates expression of the alternative TAK1 splice variant TAK1&#x394;Glu 12 (TAK1&#x394;E12) (<xref ref-type="bibr" rid="B25">Braeutigam et al., 2014</xref>). TAK1&#x394;E12 is constitutively active, which means downstream signalling kinases, such as p38 MAPK and JNK, are constitutively phosphorylated (<xref ref-type="bibr" rid="B286">Yamashita et al., 2008</xref>; <xref ref-type="bibr" rid="B260">Tripathi et al., 2019</xref>). Transcription factors regulated by p38 MAPK and JNK are involved with upregulating genes that promote proliferation and EMT (<xref ref-type="fig" rid="F9">Figure 9</xref>) (<xref ref-type="bibr" rid="B302">Zhao et al., 2017</xref>).</p>
<p>Finally, TGF&#x3b2; can also promote EMT by upregulating DNA methyltransferases, which hypermethylate promoters of various genes involved in the regulation of the cell cycle, apoptosis, cell-cell attachments, ECM production, and cell movement (<xref ref-type="bibr" rid="B159">Lu et al., 2017</xref>). For example, in ovarian carcinoma cells, reduced transcription of <italic>CDH1,</italic> which encodes E-Cadherin, is associated with hypermethylation in the presence of TGF&#x3b2; (<xref ref-type="fig" rid="F9">Figure 9</xref>) (<xref ref-type="bibr" rid="B27">Cardenas et al., 2014</xref>).</p>
<p>Similar to EMT, endothelial-mesenchymal transition (EndMT) occurs when endothelial cells lose tight junctions and downregulate various endothelial cell markers, such as VE-Cadherin, to acquire mesenchymal properties, including expression of &#x3b1;-smooth muscle actin and N-Cadherin (<xref ref-type="bibr" rid="B93">Hong et al., 2018</xref>). EndMT is important during cardiac development and wound healing, and is believed to be an important contributor to certain pathologies (<xref ref-type="bibr" rid="B147">Lin et al., 2012</xref>). EndMT has been described in cardiovascular pathologies, such as atherosclerosis, cardiac fibrosis, and pulmonary hypertension (<xref ref-type="bibr" rid="B107">Jimenez and Piera-Velazquez, 2016</xref>). Recently, evidence has emerged that some cancer-associated fibroblasts (CAFs) have an endothelial origin (<xref ref-type="bibr" rid="B295">Zeisberg et al., 2007</xref>). These CAFs express &#x3b1;-smooth muscle actin and type I collagen, which are markers associated with excessive scarring and ECM remodelling (<xref ref-type="bibr" rid="B290">Yeon et al., 2018</xref>). A pathway linking TGF&#x3b2; to EndMT involves TGF&#x3b2;-mediated upregulation of SNAIL, which in turn induces downregulation of VE-Cadherin (<xref ref-type="bibr" rid="B210">Platel et al., 2019</xref>). Additionally, when TGF&#x3b2;-dependent ERK phosphorylation was blocked, TGF&#x3b2;-dependent EndMT was attenuated (<xref ref-type="bibr" rid="B282">Wylie-Sears et al., 2014</xref>).</p>
<p>There are several factors involved with TGF&#x3b2;-dependent EMT/EndMT regulation. First, the chromatin structure and epigenetics of a cell dictate if SNAIL and other transcription factors can access genes subject to their regulation (<xref ref-type="bibr" rid="B179">Millanes-Romero et al., 2013</xref>; <xref ref-type="bibr" rid="B113">Kaufhold and Bonavida, 2014</xref>). Second, miRNAs block the expression of EMT/EndMT-transcription factors. For instance, microRNA-34 and microRNA-200 prevent the translation of SNAIL and ZEB1, respectively (<xref ref-type="bibr" rid="B30">Chaffer et al., 2016</xref>; <xref ref-type="bibr" rid="B98">Imani et al., 2017</xref>; <xref ref-type="bibr" rid="B255">Title et al., 2018</xref>). Finally, each cell type has different intracellular signalling configurations. Therefore, the rate in which different cell types conduct Smad-dependent or -independent signalling is not the same (<xref ref-type="bibr" rid="B281">Wu et al., 2016</xref>). In conclusion, cells that upregulate microRNAs that block EMT/EndMT-transcription factor translation, contain DNA methylation in the promoters of genes regulated by EMT/EndMT-transcription factors, and favour tumour suppressive TGF&#x3b2; pathways are less likely to undergo TGF&#x3b2;-dependent EMT/EndMT.</p>
</sec>
</sec>
<sec id="s5">
<title>The relationship between autophagy and the tumour promoting properties of TGF&#x3b2;</title>
<p>Immunosuppression, increased angiogenesis, and EMT are the most widely studied mechanisms whereby TGF&#x3b2; promotes tumourigenesis. However, the pro-tumourigenic activity of TGF&#x3b2; likely includes additional biological processes, such as autophagy (<xref ref-type="bibr" rid="B245">Suzuki et al., 2010</xref>). Autophagy, Greek for self-devouring, is a catabolic process where cells degrade and recycle their own macromolecules and organelles primarily <italic>via</italic> lysosomes (<xref ref-type="bibr" rid="B114">Kaur and Debnath, 2015</xref>). Autophagy is essential for recycling the building blocks of lipids, carbohydrates, and proteins as well as eliminating invading pathogens, protein aggregates, and damaged organelles (<xref ref-type="bibr" rid="B16">Bernard and Klionsky, 2013</xref>). Although autophagy is primarily facilitated by lysosomes, which are acidic organelles that contain luminal degradative hydrolases, other acidic vesicles, such as late endosomes, contribute to autophagic degradation (<xref ref-type="bibr" rid="B136">Lawrence and Zoncu, 2019</xref>).</p>
<p>The idea that TGF&#x3b2;-dependent tumourigenesis may rely on autophagy is supported by the extensive roles that autophagy plays in tumour development, maintenance, and metastasis (<xref ref-type="bibr" rid="B171">Mathew et al., 2007</xref>). Similar to TGF&#x3b2;, the tumour regulatory consequences of autophagy are context dependent, as autophagy can result in either tumour suppression or promotion, depending on the stage of tumour development (<xref ref-type="bibr" rid="B122">Kiyono et al., 2009</xref>; <xref ref-type="bibr" rid="B73">Glick et al., 2010</xref>). In non-cancerous tissues, autophagy functions as a homeostatic safeguard by removing protein aggregates, damaged organelles, and other metabolic stressors, all of which protects against neoplastic transformation (<xref ref-type="bibr" rid="B172">Mathew et al., 2009</xref>; <xref ref-type="bibr" rid="B123">Klionsky et al., 2016</xref>). However, autophagy participates in the survival of established tumour cells under conditions of hypoxia, oxidative damage, metabolic stress, and starvation. Furthermore, cancer cells with elevated rates of autophagy tend to grow more rapidly and are prone to metastasize (<xref ref-type="bibr" rid="B122">Kiyono et al., 2009</xref>; <xref ref-type="bibr" rid="B224">Rebecca and Amaravadi, 2016</xref>; <xref ref-type="bibr" rid="B4">Alizadeh et al., 2018</xref>). Autophagy has been linked to EMT, MMP secretion, angiogenesis, evasion of immune surveillance, promigratory cytokine secretion, anoikis resistance, and stemness in tumour cells (<xref ref-type="bibr" rid="B189">Mowers et al., 2017</xref>). Autophagy has also been implicated in resistance to chemotherapeutic agents that target rapidly dividing cells, because it promotes tumour cell dormancy (<xref ref-type="table" rid="T1">Table 1</xref>) (<xref ref-type="bibr" rid="B199">O&#x2019;Donovan et al., 2011</xref>). Accordingly, silencing of autophagic proteins can increase the efficacy of chemotherapeutic agents (<xref ref-type="bibr" rid="B299">Zhang et al., 2015</xref>). Autophagy can also improve survival of circulating tumour cells and establishment of the pre-metastatic niche (<xref ref-type="bibr" rid="B189">Mowers et al., 2017</xref>), as well as increase tumour cell survival after metastasis (<xref ref-type="bibr" rid="B206">Pavlides et al., 2012</xref>; <xref ref-type="bibr" rid="B224">Rebecca and Amaravadi, 2016</xref>). Overall, autophagy plays important roles in the regulation of EMT, immune surveillance, and angiogenesis (<xref ref-type="bibr" rid="B245">Suzuki et al., 2010</xref>; <xref ref-type="bibr" rid="B263">Tuloup-Minguez et al., 2013</xref>; <xref ref-type="bibr" rid="B4">Alizadeh et al., 2018</xref>; <xref ref-type="bibr" rid="B278">Wu et al., 2018</xref>; <xref ref-type="bibr" rid="B158">Losier et al., 2019</xref>).</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>The tumour promoting properties of autophagy.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">The tumour promoting properties of autophagy</th>
<th align="left">&#x2014;</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Primary tumour</td>
<td align="left">Secondary tumour</td>
</tr>
<tr>
<td align="left">Increased EMT</td>
<td align="left">Tumour cell dormancy</td>
</tr>
<tr>
<td align="left">Increased Motility</td>
<td align="left">Drug resistance</td>
</tr>
<tr>
<td align="left">Anoikis resistance</td>
<td align="left">Survival</td>
</tr>
<tr>
<td align="left">Immunosuppression</td>
<td align="left">Establishing metastatic</td>
</tr>
<tr>
<td align="left">Drug resistance</td>
<td align="left">colonies</td>
</tr>
<tr>
<td align="left">Secretes tumour</td>
<td align="left">&#x2014;</td>
</tr>
<tr>
<td align="left">promoting cytokines</td>
<td align="left">&#x2014;</td>
</tr>
<tr>
<td align="left">Cell adhesion turnover</td>
<td align="left">&#x2014;</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Epithelial-mesenchymal transition (EMT).</p>
</fn>
</table-wrap-foot>
</table-wrap>
<sec id="s5-1">
<title>Mechanism of TGF&#x3b2;-induced autophagy</title>
<p>Both Smad-dependent and -independent TGF&#x3b2; signalling can contribute to increases in the rate of autophagy (i.e. autophagic flux). Smad-dependent signalling activates transcription of genes essential to autophagy, such as <italic>autophagy-related gene</italic> (<italic>ATG</italic>)<italic>5, ATG7, BECLIN1</italic>, and <italic>DAPK1</italic> (<xref ref-type="fig" rid="F10">Figure 10A</xref>) (<xref ref-type="bibr" rid="B245">Suzuki et al., 2010</xref>; <xref ref-type="bibr" rid="B161">Ma et al., 2017</xref>). TGF&#x3b2; can also increase steady-state levels of beclin1, autophagy-related protein (Atg)7, Atg5, uncoordinated 51-like autophagy activating kinase 1 (ULK1), and microtubule-associated protein light chain 3-II (LC3-II) (<xref ref-type="bibr" rid="B284">Xu et al., 2012</xref>; <xref ref-type="bibr" rid="B258">Trelford and Guglielmo, 2020</xref>). Non-canonical TAK1-mediated TGF&#x3b2; signalling has also been implicated in regulation of autophagy. Specifically, TGF&#x3b2; induces phosphorylation and activation of 5&#x2019; adenosine monophosphate-activated protein kinase (AMPK) by TAK1 (<xref ref-type="bibr" rid="B91">Herrero-Mart&#xed;n et al., 2009</xref>), thereby increasing autophagy as AMPK activates ULK1 and suppresses mTOR (<xref ref-type="bibr" rid="B174">Mcalpine et al., 2013</xref>). mTOR antagonizes autophagy through the addition of an inhibitory phosphate to ULK1, which prevents the formation of the autophagy initiating ULK1 complex (<xref ref-type="bibr" rid="B163">Makhov et al., 2014</xref>). TAK1 and JNK signalling have also been linked to increased steady-state levels of LC3 and beclin1. LC3 and beclin1 steady-state levels are correlated to the number of autophagosomes, double membrane vesicles that sequester cellular cargo prior to fusing with lysosomes, and increased lysosomal degradation (<xref ref-type="fig" rid="F10">Figure 10B</xref>) (<xref ref-type="bibr" rid="B237">Shin et al., 2013</xref>). In support of this, TGF&#x3b2; increases autophagosomes production, LC3 co-localization with autophagosomes or lysosomes, and autophagosome-lysosome fusion in a variety of cell types (<xref ref-type="fig" rid="F10">Figure 10C</xref>&#x26;D) (<xref ref-type="bibr" rid="B4">Alizadeh et al., 2018</xref>; <xref ref-type="bibr" rid="B258">Trelford and Guglielmo, 2020</xref>).</p>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption>
<p>The mechanism of TGF&#x3b2;-dependent autophagy. <bold>(A)</bold> In Smad-dependent transforming growth factor-&#x3b2; (TGF&#x3b2;) signalling described in <xref ref-type="fig" rid="F2">Figure 2</xref>, phosphorylated receptor Smads (R-Smads) enter the nucleus with Smad4 and upregulate genes essential to autophagy. Although R-Smad transcription factors may function independently of Smad4, Smad4 knockdown blocked TGF&#x3b2;-dependent autophagy. <bold>(B)</bold> In Smad-independent TGF&#x3b2; signalling described in <xref ref-type="fig" rid="F4">Figure 4</xref>, polyubiquitination of tumour necrosis factor receptor-associated factor 6 (TRAF6) recruits TGF&#x3b2;-activated kinase 1 (TAK1) binding proteins two and 3 (TAB2/3), which leads to TAK1 phosphorylation. Phosphorylated TAK1 activates p38 mitogen-activated protein kinase (p38) and c-Jun amino-terminal kinase (JNK) that phosphorylate several transcription factors that upregulate microtubule-associated protein light chain 3B (LC3B) and beclin1 (BECN1) expression, respectively. TAK1 also phosphorylates 5&#x2019; adenosine monophosphate-activated protein kinase (AMPK), which is an inhibitor of an autophagy suppressor called mechanistic target of rapamycin (mTOR). mTOR suppresses autophagy by adding an inhibitory phosphate to uncoordinated-51-like autophagy activating protein kinase 1 (ULK1). LC3B, BECN1, and ULK1 promote autophagosome assembly, which may increase lysosomal-dependent degradation. <bold>(C)</bold> Both Smad-dependent and -independent TGF&#x3b2; signalling induces macroautophagy. Macroautophagy is initiated when complexes containing ULK1 phosphorylate beclin1. Beclin1 is then primed to form protein complexes that are recruited to the rough endoplasmic reticulum membrane to nucleate phagophores. As the phagophore membranes are elongated with lipids and LC3B, cargo proteins, and organelles, such as mitochondria, are sequestered within autophagosomes. Once phagophore assembly is complete, it forms a mature double membrane vesicle called an autophagosomes. Autophagosomes fuse with lysosomes to generate autolysosomes. The autophagosomes and cargo are degraded by lysosomal proteases. <bold>(D)</bold> Schematic illustrating that in the absence of TGF&#x3b2; there are few autophagosomes and autolysosomes. In the presence of TGF&#x3b2;, the number of autophagosomes and autolysosomes is increased.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g010.tif"/>
</fig>
<p>In non-small cell lung cancer cells transfected with a pMRX-IP-green fluorescent protein (GFP)-LC3-red fluorescent protein (RFP)-LC3&#x394;Gly construct, TGF&#x3b2; decreased the GFP/RFP ratio, which verified that TGF&#x3b2; upregulated autophagic flux (<xref ref-type="bibr" rid="B258">Trelford and Guglielmo, 2020</xref>). However, the TGF&#x3b2;-dependent increase in autophagic flux was attenuated by Smad4 knockdown or TAK1/TRAF6/p38 MAPK pathway disruption (<xref ref-type="bibr" rid="B257">Trelford and Di Guglielmo, 2021</xref>). In the same cell line system, TGF&#x3b2; increased the proportion of phosphorylated ULK1 mediated by AMPK and further investigation showed that ULK1 inhibition blocked TGF&#x3b2;-dependent autophagy (<xref ref-type="bibr" rid="B257">Trelford and Di Guglielmo, 2021</xref>; <xref ref-type="bibr" rid="B259">Trelford and Guglielmo, 2021</xref>). In summary, Smad-dependent and -independent TGF&#x3b2; signalling activate autophagy in a ULK1-dependent manner (<xref ref-type="bibr" rid="B257">Trelford and Di Guglielmo, 2021</xref>).</p>
</sec>
<sec id="s5-2">
<title>The activation of autophagy through TGF&#x3b2; augments tumourigenesis</title>
<p>Autophagy and TGF&#x3b2; signalling are reciprocally regulated. In fact, autophagy inhibition blocks Smad-dependent TGF&#x3b2; signalling by impairing TGF&#x3b2; receptor endocytosis (<xref ref-type="bibr" rid="B256">Trelford and Di Guglielmo, 2022</xref>). Also, siRNA targeting of <italic>ATGs</italic> disrupt TGF&#x3b2;-induced apoptosis and cell cycle arrest (<xref ref-type="bibr" rid="B100">Irimie et al., 2015</xref>). TGF&#x3b2;-induced autophagy has been implicated in EMT, angiogenesis, and immune suppression (<xref ref-type="fig" rid="F11">Figure 11A</xref>). For instance, TGF&#x3b2; signalling pathways that activate autophagy regulate pro-tumourigenic TGF&#x3b2; outcomes. Indeed, disrupting Smad4 and TAK1/TRAF6/p38 MAPK signalling pathways blocked TGF&#x3b2;-dependent E-Cadherin to N-Cadherin shift and stress fiber formation (<xref ref-type="bibr" rid="B256">Trelford and Di Guglielmo, 2022</xref>). Attenuation of TGF&#x3b2;-induced migration has also been reported following inhibition of autophagy (<xref ref-type="bibr" rid="B4">Alizadeh et al., 2018</xref>). In pancreatic ductal adenocarcinoma cells, autophagy is required for TGF&#x3b2;-induced migration, proliferation, and invasion (<xref ref-type="bibr" rid="B88">He et al., 2019</xref>; <xref ref-type="bibr" rid="B143">Li et al., 2021</xref>). TGF&#x3b2;-induced autophagy also decreases the expression of proinflammatory cytokines in macrophages (<xref ref-type="bibr" rid="B212">Pokharel et al., 2016</xref>). Furthermore, genomic analysis of colon cancer revealed that autophagy upregulates immune checkpoint molecules that dampen the immune response, whereas EMT, TGF&#x3b2;, and angiogenic pathways were enhanced (<xref ref-type="bibr" rid="B305">Zhu et al., 2020</xref>). <italic>In vivo</italic> xenograft models of breast cancer demonstrate that TGF&#x3b2;-induced autophagy protected fibroblasts from cell death-mediated by nutrient starvation and increased CAF phenotypes (<xref ref-type="bibr" rid="B154">Liu et al., 2016</xref>). Although the research of the effect of TGF&#x3b2;-induced autophagy in tumourigenesis is scarce, data shows that as TGF&#x3b2; signalling and autophagy are upregulated, angiogenesis and EMT increase whereas the immune response is dampened (<xref ref-type="fig" rid="F11">Figure 11B</xref>) (<xref ref-type="bibr" rid="B26">Bustos et al., 2020</xref>).</p>
<fig id="F11" position="float">
<label>FIGURE 11</label>
<caption>
<p>The interplay between autophagy and TGF&#x3b2; signalling in tumourigenesis. <bold>(A)</bold> A schematic summarizing the effect of TGF&#x3b2;-induced autophagy on EMT, immune surveillance, angiogenesis, and metastasis. Epithelial cells acquire mutations to the TGF&#x3b2; pathway until they become cancerous and proliferate rapidly to form the primary tumour. TGF&#x3b2;-induced autophagy protects tumour cells from the innate immune system (macrophages, dendritic cells, neutrophils, Natural Killer cells) and cells of the adaptive immune system (Naive T-cell, Cytotoxic T-cells, Helper T-cells, B-cells, and plasma cells). Furthermore, TGF&#x3b2; and autophagy can prevent activation of immune cells that reside in lymph nodes. TGF&#x3b2;-induced autophagy promotes the release of vascular endothelial growth factor (VEGF) that stimulate angiogenesis. Over time, cells acquire a mesenchymal-like phenotype and release matrix metalloproteinases (MMPs) to breakdown the basal lamina and intravasate into the bloodstream. TGF&#x3b2;-induced autophagy promotes intravasation because it protects cells that detach from the basal lamina against anoikis-dependent cell death. The mesenchymal-like tumour cells extravasate from the blood vessel at a distant site from the primary tumour. Autophagy is critical for promoting phenotypes to help tumour cells adapt to new environments and establish secondary tumour sites. <bold>(B)</bold> As the concentration of transforming growth factor-&#x3b2; (TGF&#x3b2;) increases, the immune response is inhibited, whereas angiogenesis, epithelial-mesenchymal transition (EMT), and autophagy are activated.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g011.tif"/>
</fig>
</sec>
<sec id="s5-3">
<title>Autophagy cargo receptors bridge autophagy and TGF&#x3b2; signalling</title>
<p>Although there are several catabolic processes that regulate protein quality control in mammalian cells, the UPP and autophagy/lysosome pathway are the two central processes (<xref ref-type="bibr" rid="B275">Wojcik, 2013</xref>). Due to difference in substrate selectivity, preparation for degradation, and degradative organelles, the UPP and autophagy do not necessarily compete with one another. Instead, their relationship may be described as compensatory. For instance, when autophagy or the UPP are disrupted, the other major route of protein degradation increases protein turnover to compensate for the disruption (<xref ref-type="bibr" rid="B275">Wojcik, 2013</xref>). One explanation is that both lysosome and proteosome-dependent degradation rely on ubiquitination to identify proteins destined for degradation (<xref ref-type="bibr" rid="B138">Lecker et al., 2006</xref>; <xref ref-type="bibr" rid="B204">Pankiv et al., 2007</xref>; <xref ref-type="bibr" rid="B121">Kirkin et al., 2009</xref>). Also, both autophagy and the UPP depend on cargo adaptor proteins such as protein 62/sequestosome 1 (p62/SQSTM1) to deliver substrate proteins (<xref ref-type="bibr" rid="B36">Cohen-Kaplan et al., 2016</xref>). Currently, the mechanism of how p62/SQSTM1 decides which pathway receives the ubiquitinated protein remains unknown. Thus far, what has been shown is that p62/SQSTM1 is an autophagy cargo receptor protein that functions in autophagic degradation, regulates EMT, binds to ubiquitin, and is important for TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B218">Puissant et al., 2012a</xref>; <xref ref-type="bibr" rid="B188">Moscat and Diaz-Meco, 2012</xref>; <xref ref-type="bibr" rid="B20">Bitto et al., 2014</xref>).</p>
<p>P62/SQSTM1 is composed of several domains including a phox bem1 (PB1) domain, ZZ-type zinc finger (ZZ) domain, TRAF binding (TB) domain, LC3-interacting region (LIR), and ubiquitin-associated (UBA) domain. The UBA domain allows p62/SQSTM1 to functions as a ubiquitin receptor protein that targets ubiquitinated proteins to proteasomes (<xref ref-type="bibr" rid="B219">Puissant et al., 2012b</xref>; <xref ref-type="bibr" rid="B36">Cohen-Kaplan et al., 2016</xref>). In addition to regulating autophagy and the proteasome, p62/SQSTM1 can sequester several downstream TGF&#x3b2; signalling molecules, including p38 MAPK, TRAF6, and aPKC using the ZZ, TB, and PB1 domains, respectively. These proteins have been implicated in modulating autophagy induction and TGF&#x3b2; receptor trafficking (<xref ref-type="bibr" rid="B227">Sanz et al., 1999</xref>). Furthermore, using the PB1 domain, p62/SQSTM1 self-oligomerizes to sequester intracellular cargo during cell stress or disruption to protein turnover pathways (<xref ref-type="bibr" rid="B152">Lippai and Low, 2014</xref>). Also, between the ZZ and TB domains, there is a region of p62/SQSTM1 that interacts with Raptor, a component of mechanistic target of rapamycin complex 1, which is an additional link between p62/SQSTM1 and autophagy (<xref ref-type="fig" rid="F12">Figure 12</xref>).</p>
<fig id="F12" position="float">
<label>FIGURE 12</label>
<caption>
<p>The structure of p62/SQSTM1. From the amino (N)-terminal to carboxyl (C)-terminal, p62/SQSTM1 is comprised of the phox bem1 (PB1), ZZ-type zinc finger (ZZ), tumour necrosis factor receptor-associated factor (TRAF) binding (TB), microtubule-associated protein light chain 3 (LC3)-interacting region (LIR), and ubiquitin-associated (UBA) domains. The PB1 domain allows protein 62/sequestosome 1 (p62/SQSTM1) to interact with atypical protein kinase C (aPKC) and self-oligomerize. The ZZ and TB domain have been shown to interact with downstream transforming growth factor-&#x3b2; (TGF&#x3b2;) signalling molecules, such as p38 mitogen-activated protein kinase (MAPK) and TRAF6, respectively. Between the ZZ and TB domains, p62/SQSTM1 associates with Raptor, which is a component of mechanistic target of rapamycin complex 1 (mTORC1). The LIR binds to LC3 and is necessary to facilitate selective autophagy. The UBA domain recognizes ubiquitin prior to delivering ubiquitin-conjugated proteins to proteasomes or lysosomes.</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g012.tif"/>
</fig>
<p>An image based genome wide small interfering RNA screen in mammalian cells identified Smurf1 as a mediator of selective autophagy (<xref ref-type="bibr" rid="B201">Orvedahl et al., 2011</xref>). Since we know that Smurf1 also mediates the UPP, this suggests that TGF&#x3b2;-specific signalling modulators also have the potential to regulate protein degradation pathways. Therefore, there is evidence of crosstalk between TGF&#x3b2; signal transduction pathways, autophagy, and the UPP. Given that autophagy, proteasomes, and p62/SQSTM1 regulate TGF&#x3b2;-dependent EMT (<xref ref-type="bibr" rid="B17">Bertrand et al., 2015</xref>; <xref ref-type="bibr" rid="B185">Moon et al., 2017</xref>; <xref ref-type="bibr" rid="B4">Alizadeh et al., 2018</xref>) and are altered by TGF&#x3b2; treatment (<xref ref-type="bibr" rid="B23">Bonni et al., 2001</xref>; <xref ref-type="bibr" rid="B144">Liang et al., 2020</xref>), proteins such as p62/SQSTM1 may be important to understanding the crosstalk between protein degradation pathways and TGF&#x3b2; signalling. Although the role of p62/SQSTM1 in tumourigenesis is context dependent, it may be an important pharmacological target for regulating TGF&#x3b2; signalling transduction in cancer (<xref ref-type="bibr" rid="B294">Yuan et al., 2013</xref>).</p>
</sec>
</sec>
<sec id="s6">
<title>Targeting TGF&#x3b2; signalling in cancer therapy</title>
<p>Due to the abnormal TGF&#x3b2; signalling in tumour cells and elevated TGF&#x3b2; ligand concentrations in tumour microenvironments, modern adjuvant therapies aim to antagonize TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B292">Yingling et al., 2004</xref>). Although TGF&#x3b2; antagonists are ineffective at treating tumourigenesis as monotherapies, antagonizing TGF&#x3b2; as part of combination therapies is promising (<xref ref-type="bibr" rid="B251">Teixeira et al., 2020</xref>). Current strategies employed to mitigate pro-tumourigenic TGF&#x3b2; signalling have been extensively reviewed elsewhere (<xref ref-type="bibr" rid="B234">Sheen et al., 2013</xref>; <xref ref-type="bibr" rid="B118">Kim et al., 2021</xref>). As such, this review will summarize therapeutic strategies undergoing clinical investigations.</p>
<p>Modern adjuvant therapies antagonize pro-tumourigenic TGF&#x3b2; signalling by targeting TGF&#x3b2; ligand production, TGF&#x3b2;-TGF&#x3b2; receptor interactions, and TGF&#x3b2; receptor kinase activity (<xref ref-type="bibr" rid="B118">Kim et al., 2021</xref>). Antisense oligodeoxynucleotides, such as Trabedersen (AP12009), AP11014, and AP15012 attenuate the mRNA expression of <italic>TGF&#x3b2;2</italic>, <italic>TGF&#x3b2;1</italic>, and <italic>TGF&#x3b2;1</italic>, respectively. Although AP11014 and AP15012 are in pre-clinical development (<xref ref-type="bibr" rid="B234">Sheen et al., 2013</xref>), Trabedersen has proven to be safe and effective and is undergoing phase III clinical trials (<xref ref-type="bibr" rid="B22">Bogdahn et al., 2011</xref>). TGF&#x3b2;-TGF&#x3b2; receptor interactions are pharmacologically blocked using ligand traps or neutralizing antibodies against TGF&#x3b2; ligands or TGF&#x3b2; receptors. AVID200, a TGF&#x3b2; trap comprised of TGF&#x3b2;RII ectodomains fused to human fragment crystallizable domains, has demonstrated high affinity for TGF&#x3b2;1 and TGF&#x3b2;3 in clinical trials (<xref ref-type="bibr" rid="B288">Yap et al., 2020</xref>). Furthermore, the success of pre-clinical studies of soluble TGF&#x3b2;RII and betaglycan receptors verify that ligand trapping is an effective approach at antagonizing TGF&#x3b2; signalling <italic>in vivo</italic> (<xref ref-type="bibr" rid="B11">Bandyopadhyay et al., 2002</xref>). As for neutralizing antibodies, Fresolimumab, a pan TGF&#x3b2; human monoclonal antibody, is in clinical trials for malignant melanoma (<xref ref-type="bibr" rid="B187">Morris et al., 2014</xref>). TGF&#x3b2;RI kinase inhibitors, such as Vactosertib and Galunisertib, are safe and effective antagonists of TGF&#x3b2; signalling and clinical trials assessing their potential in combination therapies are in progress (<xref ref-type="fig" rid="F13">Figure 13</xref>) (<xref ref-type="bibr" rid="B90">Herbertz et al., 2015</xref>; <xref ref-type="bibr" rid="B240">Song et al., 2019</xref>).</p>
<fig id="F13" position="float">
<label>FIGURE 13</label>
<caption>
<p>TGF&#x3b2; signalling targeted therapies. <bold>(A)</bold> Trabedersen (AP12009), AP11014, and AP15012 are antisense oligodeoxynucleotides that decrease <italic>TGFB</italic> expression <italic>via</italic> mRNA targeting. <bold>(B)</bold> Fresolimumab and ABBV-151 are monoclonal antibodies against TGF&#x3b2; ligands that block TGF&#x3b2; from binding to TGF&#x3b2; receptor type II (TGF&#x3b2;RII). AVID200 and M7824 are ligand traps that compete with TGF&#x3b2;RII for TGF&#x3b2; ligands. Galunisertib and Vactosertib are TGF&#x3b2; receptor type I (TGF&#x3b2;RI) kinase antagonists. <bold>(C)</bold> Chloroquine is an autophagy inhibitor that blocks autophagosomes and endosomes from fusing with lysosomes as well as lysosomal-dependent degradation. Chloroquine impedes TGF&#x3b2; receptor internalization and trafficking through early endosome, late endosome, and lysosome membrane compartments. Chloroquine also decreases receptor regulated Smad (R-Smad) phosphorylation, R-Smad nuclear translocation, and TGF&#x3b2;-dependent epithelial-mesenchymal transition (EMT).</p>
</caption>
<graphic xlink:href="fmolb-09-991612-g013.tif"/>
</fig>
<p>Given that TGF&#x3b2; protects tumour cells from the immune system and cancer cells stimulate immune checkpoint inhibitory receptors, anti-tumourigenic immunotherapies are being developed to stimulate immune-mediated destruction of tumour cells (<xref ref-type="bibr" rid="B10">Bai et al., 2019</xref>). As such, numerous clinical trials are assessing the efficacy of combining immune checkpoint inhibitors alongside TGF&#x3b2; signalling antagonists (<xref ref-type="bibr" rid="B165">Maruyama et al., 2022</xref>). For instance, ABBV-151 and Budigalimab (formerly known as ABBV-181), anti-TGF&#x3b2;1 and anti-programmed cell death receptor one antibodies, respectively, have begun phase I clinical trials for advanced solid tumours (<xref ref-type="bibr" rid="B216">Powderly et al., 2020</xref>). Likewise, the safety and efficacy of Vactosertib or Galunisertib in conjunction with Durvalumab, a monoclonal programed cell death ligand 1 (PD-L1) antibody, are under investigation in lung, pancreatic, colorectal, and gastric cancer clinical trials (<xref ref-type="bibr" rid="B10">Bai et al., 2019</xref>). Finally, M7824, a bifunctional fusion protein containing an extracellular TGF&#x3b2;RII domain and antibody against PD-L1, localizes to tumour microenvironments, sequesters TGF&#x3b2; ligands, and stimulates T-cell immune activity (<xref ref-type="fig" rid="F13">Figure 13</xref>) (<xref ref-type="bibr" rid="B124">Knudson et al., 2018</xref>; <xref ref-type="bibr" rid="B207">Paz-Ares et al., 2018</xref>; <xref ref-type="bibr" rid="B150">Lind et al., 2020</xref>).</p>
<p>Although the dual blockage of immune checkpoint inhibitors and TGF&#x3b2; signalling is promising, several obstacles with respect to antagonizing TGF&#x3b2; signalling in tumourigenesis remain. For instance, targeting TGF&#x3b2; signalling has been successful <italic>in vitro</italic> and in pre-clinical studies; however, these outcomes fail to translate in clinical trials (<xref ref-type="bibr" rid="B251">Teixeira et al., 2020</xref>). Limited understanding of the interplay between the numerous proteins involved in TGF&#x3b2; synthesis, activation, signalling, and signalling crosstalk are among the shortcoming of utilizing modern TGF&#x3b2; inhibitors in adjuvant combination therapies (<xref ref-type="bibr" rid="B118">Kim et al., 2021</xref>). Indeed, the combination of the ubiquitous expression of TGF&#x3b2; ligands, lack of dosing regimens, and its dual role in tumourigenesis pose a challenge to utilizing TGF&#x3b2; antagonists in cancer therapy (<xref ref-type="bibr" rid="B234">Sheen et al., 2013</xref>).</p>
<p>To date, few autophagy inhibitors have been approved for clinical trials for anticancer therapy. Among those approved, diprotic weak bases, such as chloroquine and hydroxychloroquine, and the proton pump inhibitor, pantoprazole, antagonize autophagy by limiting endosomal and/or lysosomal acidification, which blunts lysosomal fusion and lysosomal hydrolase activity (<xref ref-type="bibr" rid="B14">Beil et al., 1992</xref>; <xref ref-type="bibr" rid="B82">Halcrow et al., 2021</xref>). However, anti-tumourigenic properties of chloroquine, hydroxychloroquine, and pantoprazole rely on both autophagy inhibition and decreasing glycolysis, lactate production, and cytosolic pH (<xref ref-type="bibr" rid="B82">Halcrow et al., 2021</xref>). Despite there being no clinical trials investigating autophagy inhibitors in combination with TGF&#x3b2; signalling antagonist, <italic>in vitro</italic> studies suggest that chloroquine can disrupt TGF&#x3b2; signalling (<xref ref-type="bibr" rid="B278">Wu et al., 2018</xref>). In Mv1Lu cells, chloroquine antagonized TGF&#x3b2;RII internalization and decreased co-localization with EEA1, Rab7, and LAMP1-positive membrane compartments. Furthermore, R-Smad phosphorylation, R-Smad nuclear translocation, and mesenchymal phenotypes in NSCLC cells treated with TGF&#x3b2;1 were suppressed by chloroquine (<xref ref-type="fig" rid="F13">Figure 13</xref>) (<xref ref-type="bibr" rid="B256">Trelford and Di Guglielmo, 2022</xref>). As such, autophagy inhibitors may be applicable in targeting tumourigenesis driven by aberrant TGF&#x3b2; signalling without the need to utilize a direct inhibitor of the TGF&#x3b2; pathway.</p>
</sec>
<sec id="s7">
<title>Concluding remarks</title>
<p>This review highlights TGF&#x3b2; signalling pathways that contribute to homeostasis and tumour biology. TGF&#x3b2; enhances tumourigenesis by promoting proliferation, immune suppression, angiogenesis, lymphangiogenesis, EMT, EndMT, and autophagy. Components of the TGF&#x3b2; pathway pharmaceutically targeted in clinical trials are limited to TGF&#x3b2; synthesis, TGF&#x3b2;-TGF&#x3b2; receptor interactions, and TGF&#x3b2;RI kinase activity. Although some combination therapies may improve patient prognosis, the efficacy of TGF&#x3b2; signalling antagonists are underwhelming. Based on the existing literature, there is an abundance of studies exploring TGF&#x3b2;-dependent EMT, angiogenesis, and immune suppression. Even though there is still much to be learned about these processes and how they interact with each other to promote tumourigenesis, studies exploring the impact that TGF&#x3b2; has on other tumour promoting biological processes are scarce. Indeed, further work is needed to explore the relationship between TGF&#x3b2; and autophagy as well as other processes involved with protein quality control, which may yield new therapeutic approaches in targeting TGF&#x3b2;-dependent tumourigenesis.</p>
</sec>
</body>
<back>
<sec id="s8">
<title>Author contributions</title>
<p>CT composed the figures and developed the first manuscript draft. GDG edited the figures, revised the manuscript, and prepared the final manuscript draft for submission. LD assisted with the manuscript draft and helped prepare the final version of the manuscript for submission.</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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