<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mol. Biosci.</journal-id>
<journal-title>Frontiers in Molecular Biosciences</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mol. Biosci.</abbrev-journal-title>
<issn pub-type="epub">2296-889X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmolb.2021.662620</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Molecular Biosciences</subject>
<subj-group>
<subject>Perspective</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Toward an Understanding of Extracellular tRNA Biology</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Torres</surname> <given-names>Adrian Gabriel</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/965484/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Mart&#x00ED;</surname> <given-names>Eul&#x00E0;lia</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="corresp" rid="c002"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1217815/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology</institution>, <addr-line>Barcelona</addr-line>, <country>Spain</country></aff>
<aff id="aff2"><sup>2</sup><institution>Departament de Biomedicina, Facultat de Medicina i Ci&#x00E8;ncies de la Salut, Institut de Neuroci&#x00E8;ncies, Universitat de Barcelona</institution>, <addr-line>Barcelona</addr-line>, <country>Spain</country></aff>
<aff id="aff3"><sup>3</sup><institution>Centro de Investigaci&#x00F3;n Biom&#x00E9;dica en Red sobre Epidemiolog&#x00ED;a y Salud P&#x00FA;blica</institution>, <addr-line>Madrid</addr-line>, <country>Spain</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Sandro Fernandes Ataide, The University of Sydney, Australia</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Lysangela Ronalte Alves, Carlos Chagas Institute (ICC), Brazil; Srujana Yadavalli, Rutgers, The State University of New Jersey - Busch Campus, United States</p></fn>
<corresp id="c001">&#x002A;Correspondence: Adrian Gabriel Torres, <email>adriangabriel.torres@irbbarcelona.org</email></corresp>
<corresp id="c002">Eul&#x00E0;lia Mart&#x00ED;, <email>eulalia.marti@ub.edu</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Protein and RNA Networks, a section of the journal Frontiers in Molecular Biosciences</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>15</day>
<month>04</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>8</volume>
<elocation-id>662620</elocation-id>
<history>
<date date-type="received">
<day>01</day>
<month>02</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>22</day>
<month>03</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2021 Torres and Mart&#x00ED;.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Torres and Mart&#x00ED;</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Extracellular RNAs (exRNAs) including abundant full length tRNAs and tRNA fragments (tRFs) have recently garnered attention as a promising source of biomarkers and a novel mediator in cell-to-cell communication in eukaryotes. Depending on the physiological state of cells, tRNAs/tRFs are released to the extracellular space either contained in extracellular vesicles (EVs) or free, through a mechanism that is largely unknown. In this perspective article, we propose that extracellular tRNAs (ex-tRNAs) and/or extracellular tRFs (ex-tRFs) are relevant paracrine signaling molecules whose activity depends on the mechanisms of release by source cells and capture by recipient cells. We speculate on how ex-tRNA/ex-tRFs orchestrate the effects in target cells, depending on the type of sequence and the mechanisms of uptake. We further propose that tRNA modifications may be playing important roles in ex-tRNA biology.</p>
</abstract>
<kwd-group>
<kwd>tRNA</kwd>
<kwd>tRNA fragments</kwd>
<kwd>extracellular vesicles</kwd>
<kwd>regulation of gene expression</kwd>
<kwd>cell-to-cell communication</kwd>
<kwd>tRNA modifications</kwd>
</kwd-group>
<contract-sponsor id="cn001">Ministerio de Ciencia, Innovaci&#x00F3;n y Universidades<named-content content-type="fundref-id">10.13039/100014440</named-content></contract-sponsor>
<counts>
<fig-count count="1"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="118"/>
<page-count count="10"/>
<word-count count="0"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1">
<title>Introduction</title>
<p>Virtually all cells are able to release RNA to the extracellular space [extracellular RNAs (exRNA)] either free, encapsulated in extracellular vesicles (EVs) (<xref ref-type="bibr" rid="B26">Fabbiano et al., 2020</xref>; <xref ref-type="bibr" rid="B118">Zietzer et al., 2020</xref>), or forming part of complexes with proteins such as Argonaute 2 (Ago2) (<xref ref-type="bibr" rid="B3">Arroyo et al., 2011</xref>; <xref ref-type="bibr" rid="B97">Turchinovich et al., 2011</xref>) and high-density lipoprotein (HDL) particles (<xref ref-type="bibr" rid="B100">Vickers et al., 2011</xref>). ExRNAs can reach other cells, be internalized, and regulate gene expression, even in distant tissues and are thus used for cell-to-cell communications (<xref ref-type="bibr" rid="B98">Valadi et al., 2007</xref>; <xref ref-type="bibr" rid="B86">Thomou et al., 2017</xref>). Additionally, exRNA content within EVs has been proposed to reflect the active status of the cells of origin (<xref ref-type="bibr" rid="B77">Sadik et al., 2018</xref>). Given that transcriptional perturbations, including altered levels of expression, occur generally early in human disease, even before obvious clinical symptoms are detected; exRNA profiling in biofluids is considered a promising strategy for disease diagnosis and prognosis through minimally invasive liquid biopsy.</p>
<p>Studies on the biological significance of exRNA have largely focused on EVs content, which is protected from extracellular RNases. Nevertheless, this concept should be re-examined since the vast majority of exRNA is extra-vesicular and can also be protected from degradation through its binding to proteins or the formation of secondary structures, resistant to nuclease activity (see below). In this sense, the relevance of the most abundant extra-vesicular exRNA is starting to be explored (<xref ref-type="bibr" rid="B100">Vickers et al., 2011</xref>; <xref ref-type="bibr" rid="B94">Tosar et al., 2020</xref>).</p>
<p>Extracellular RNA is strongly enriched in tRNA and tRNA fragments (tRFs) compared with other species such as microRNAs (miRNAs) that have traditionally received more attention. This has been extensively documented in multiple biofluids such as urine, blood serum, saliva, or cerebrospinal fluid. Thus, these species offer an important source of biomarkers that can sense the biogenesis of tRFs linked to stress and disease (<xref ref-type="bibr" rid="B25">Dhahbi et al., 2013</xref>; <xref ref-type="bibr" rid="B115">Zhang et al., 2014</xref>; <xref ref-type="bibr" rid="B31">Godoy et al., 2018</xref>). The strong abundance of vesicular and non-vesicular extracellular tRNAs and tRFs (ex-tRNA/ex-tRF) has been also confirmed in cell culture media, in diverse <italic>in vitro</italic> studies (<xref ref-type="bibr" rid="B33">Guzman et al., 2015</xref>; <xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>; <xref ref-type="bibr" rid="B109">Wei et al., 2017</xref>). Several aspects of ex-tRNA/ex-tRF biology are still to date controversial, primarily due to technical issues and limitations that can compromise the interpretation of findings. We refer the reader to a recent and thorough review by <xref ref-type="bibr" rid="B91">Tosar and Cayota (2020)</xref> that compiles the current knowledge on the ex-tRNA/ex-tRF field in light of this matter.</p>
<p>With the realization of non-canonical tRNA functions mediated by either full length tRNAs or tRFs (<xref ref-type="bibr" rid="B4">Avcilar-Kucukgoze and Kashina, 2020</xref>), there is a pressing need to further improve our understanding on the generation, release, stability, and uptake of ex-tRNAs and ex-tRFs (<xref ref-type="fig" rid="F1">Figure 1</xref>). Here, we propose that the activity of ex-tRNA and ex-tRFs depends upon the mechanisms of release and capture of these molecules. We reason that tRNA/tRF release is a complex phenomenon, involving cell dependent passive and/or selective RNA sorting in different extracellular compartments, and likewise, that the possible mechanisms of capture and activity of these species in recipient cells may be cell type-specific and depend on the nature of the ex-tRNA/ex-tRF sequences. We further emphasize on the potential roles of post-transcriptional tRNA modifications in ex-tRNA/ex-tRF biology.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Extracellular tRNA and tRFs in cell-to-cell communication. tRNAs and tRFs are passively or selectively loaded into EVs and released to the extracellular space. Additionally, cells release ex-tRNAs/ex-tRFs that are not associated with EVs, but these species may be protected from degradation by RNases through the formation of secondary structures, G-quadruplexes, and/or ribonucleoprotein complexes. Red asterisks indicate modified nucleotides in tRNAs. Uptake by target cells may occur through the direct fusion of EVs with the plasma membrane, non-specific endocytosis, or receptor-mediated endocytosis. Naked ex-tRNA/ex-tRFs can also be passively or selectively captured by cells. Inside cells ex-tRNAs/ex-tRFs may influence gene expression and/or protein translation, modulating stress and immune responses.</p></caption>
<graphic xlink:href="fmolb-08-662620-g001.tif"/>
</fig>
</sec>
<sec id="S2">
<title>tRNAs and tRFs Are Abundant Components of the Extracellular Compartment</title>
<p>The release of tRNAs and/or tRFs to extracellular compartments has been documented in organisms across all kingdoms (<xref ref-type="bibr" rid="B7">Bayer-Santos et al., 2014</xref>; <xref ref-type="bibr" rid="B49">Lambertz et al., 2015</xref>; <xref ref-type="bibr" rid="B73">Peres da Silva et al., 2015</xref>; <xref ref-type="bibr" rid="B95">Tsatsaronis et al., 2018</xref>; <xref ref-type="bibr" rid="B2">Alves et al., 2019</xref>; <xref ref-type="bibr" rid="B91">Tosar and Cayota, 2020</xref>; <xref ref-type="bibr" rid="B106">Wang et al., 2021</xref>). Full length tRNAs constitute a large part of the RNAs found in EVs in many studies (<xref ref-type="bibr" rid="B68">Nolte-&#x2019;t Hoen et al., 2012</xref>; <xref ref-type="bibr" rid="B114">Zhang et al., 2020</xref>; <xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>; <xref ref-type="bibr" rid="B79">Shurtleff et al., 2017</xref>). For instance, over-representation of tRNAs has been observed in EVs released by breast cells, bone marrow and adipose-mesenchymal stem cells, lung cells, and EVs from biofluids (<xref ref-type="bibr" rid="B103">Vojtech et al., 2014</xref>; <xref ref-type="bibr" rid="B5">Baglio et al., 2015</xref>; <xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>). However, different types of EVs may show distinctive, unique cargos. For example, tRNA content differs in EVs shed by melanoma cells, being abundant in microvesicles (EVs: 200&#x2013;500 &#x03BC;m) and apoptotic bodies but are little represented in exosomes (EVs &#x003C; 150 &#x03BC;m) (<xref ref-type="bibr" rid="B53">Lunavat et al., 2015</xref>). In addition to full length tRNAs, bioactive tRFs are also highly concentrated in EVs (<xref ref-type="bibr" rid="B68">Nolte-&#x2019;t Hoen et al., 2012</xref>; <xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>; <xref ref-type="bibr" rid="B18">Chiou et al., 2018</xref>).</p>
<p>Although the major proportion of exRNA does not co-purify with EVs (<xref ref-type="bibr" rid="B3">Arroyo et al., 2011</xref>; <xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>), the extra-vesicular compartment of RNA species has just started to receive attention. Studies performed in serum (<xref ref-type="bibr" rid="B25">Dhahbi et al., 2013</xref>, <xref ref-type="bibr" rid="B24">2014</xref>) and different types of adherent cultured cells (<xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>) show that fragments derived from ribosomal RNAs (rRNA) and tRNA halves dominate the non-vesicular extracellular compartment, probably forming part of nucleoprotein complexes. Notably, the composition of ex-tRNAs is strongly biased to specific 5&#x2032;tRFs derived from tRNA<sup>Glu</sup><sub>CUC</sub> and tRNA<sup>Gly</sup><sub>GCC</sub> (<xref ref-type="bibr" rid="B94">Tosar et al., 2020</xref>).</p>
<p>It has been recently shown that the composition of non-vesicular exRNA is largely dependent on their protection from degradation by extracellular nucleases (<xref ref-type="bibr" rid="B67">Nechooshtan et al., 2020</xref>; <xref ref-type="bibr" rid="B94">Tosar et al., 2020</xref>). This has been demonstrated in a recent study that profiled exRNA in the presence and absence of a ribonuclease inhibitor (<xref ref-type="bibr" rid="B94">Tosar et al., 2020</xref>). The ribonuclease inhibitor strongly increased the complexity of exRNA molecules in the cell culture medium, showing highly abundant full length tRNAs and rRNAs that were efficiently cleaved to tRNA- and rRNA-fragments when RNases were not inhibited. Even in the presence of RNases, the abovementioned Glu- and Gly-5&#x2032; tRFs remain highly abundant, through the formation of homo- or heterodimeric hybrids that render them resistant to single-stranded RNases. Furthermore, certain tRFs can fold into highly stable intermolecular tetramers stabilized by G-quadruplex structures (<xref ref-type="bibr" rid="B54">Lyons et al., 2017</xref>). These data strongly suggest a direct correlation between the abundance of particular exRNA species and their stability.</p>
</sec>
<sec id="S3">
<title>The RNA Complexity in Different Types of Extracellular Compartments. Is There Specific Sorting and Release?</title>
<p>Diverse data suggest a specific RNA sorting to different extracellular compartments. For instance, EVs contain miRNAs, full length tRNAs and tRFs, small nucleolar RNAs (snoRNAs), PlWI-interacting RNAs (piRNAs), long non-coding RNAs (lncRNAs), YRNAs, rRNAs, mitochondrial RNAs, and protein-coding RNAs (<xref ref-type="bibr" rid="B9">Bellingham et al., 2012</xref>; <xref ref-type="bibr" rid="B22">Crescitelli et al., 2013</xref>; <xref ref-type="bibr" rid="B38">Huang et al., 2013</xref>; <xref ref-type="bibr" rid="B15">Chakrabortty et al., 2015</xref>; <xref ref-type="bibr" rid="B99">van Balkom et al., 2015</xref>; <xref ref-type="bibr" rid="B50">L&#x00E4;sser et al., 2017</xref>). The HDL cargo, however, contains diverse classes of sRNAs but lacks protein-coding RNAs (<xref ref-type="bibr" rid="B61">Michell et al., 2016</xref>), and miRNAs are the principal class binding to extracellular Ago2 (<xref ref-type="bibr" rid="B3">Arroyo et al., 2011</xref>; <xref ref-type="bibr" rid="B97">Turchinovich et al., 2011</xref>; <xref ref-type="bibr" rid="B61">Michell et al., 2016</xref>). It is thus possible that tRNAs and tRFs may also be selectively sorted and released into the extracellular environment to tune the exRNA population for physiological needs.</p>
<p>Extracellular RNA profiles in different extracellular compartments are difficult to compare between studies due to the lack of a consensus experimental approach (<xref ref-type="bibr" rid="B91">Tosar and Cayota, 2020</xref>). Methods in EVs isolation differ in the purity of EVs (<xref ref-type="bibr" rid="B62">Mongui&#x00F3;-Tortajada et al., 2019</xref>), and specific nucleotide species originally assigned to EVs have been recently reassigned to other extracellular compartments (<xref ref-type="bibr" rid="B42">Jeppesen et al., 2019</xref>). In addition, separation of RNA in vesicles from RNAs associated with other extracellular carriers, including lipoproteins (<xref ref-type="bibr" rid="B100">Vickers et al., 2011</xref>) and ribonucleoproteins (<xref ref-type="bibr" rid="B3">Arroyo et al., 2011</xref>; <xref ref-type="bibr" rid="B85">Th&#x00E9;ry et al., 2018</xref>; <xref ref-type="bibr" rid="B58">Mathieu et al., 2019</xref>; <xref ref-type="bibr" rid="B66">Murillo et al., 2019</xref>) remain challenging, and are still under debate. These technical difficulties are further hampered by the variations in the strategies for RNA purification and library preparation for sequencing purposes, which result in different relative proportions of the multiple classes of RNAs. This is particularly true when attempting to detect and quantify tRNAs and tRFs (<xref ref-type="bibr" rid="B90">Torres et al., 2019</xref>).</p>
<p>The comparison between the RNA composition of the source cells and EVs has been used as a readout to demonstrate selective release to the extracellular space. The widely documented asymmetric distribution between these two compartments (<xref ref-type="bibr" rid="B76">Ragusa et al., 2017</xref>) agrees with the idea that packaging of exRNAs into EVs is a cell type-dependent, orchestrated process. For instance, studies performed in exosomes released by early passage adipose- and bone marrow-mesenchymal stem cells show that a defined set of miRNAs are overrepresented in exosomes compared to the cell of origin, while other highly expressed miRNAs are precluded from exosomal sorting (<xref ref-type="bibr" rid="B5">Baglio et al., 2015</xref>). However, the abundance for the majority of miRNAs correlated in breast cell lines and released exosomes, favoring the idea of a general passive sorting and release (<xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>). In this study, only a few miRNAs showed an asymmetric abundance between cells and exosomes. Some of the extracellular enriched miRNAs were reported as contaminants derived from cell culture additives (<xref ref-type="bibr" rid="B108">Wei et al., 2016</xref>; <xref ref-type="bibr" rid="B92">Tosar et al., 2017</xref>), which further favors the passive release, at least in breast cell lines.</p>
<p>Just as for other exRNAs, mounting evidence points toward a model where tRNA and tRFs sorting and release can be cell dependent. For example, a selective loading of tRNAs in EVs has been detected in mouse dendritic- and T cells-derived EVs, showing a strong enrichment of the tRNA<sup>Lys</sup><sub>AAA</sub>, compared to RNA recovered from the intracellular space (<xref ref-type="bibr" rid="B68">Nolte-&#x2019;t Hoen et al., 2012</xref>). Likewise, an uneven proportion of specific tRFs within EVs has been recently reported in T-cells, consistent with a selective export (<xref ref-type="bibr" rid="B18">Chiou et al., 2018</xref>). Other studies, however, show a general strong correlation between the cellular and EV content of tRNAs and tRFs in specific adherent cells (<xref ref-type="bibr" rid="B93">Tosar et al., 2015</xref>), pointing to a passive sorting and release of these species.</p>
<p>Selective charging of exRNAs into EVs has also been found in bacteria and parasitic eukaryotes. For example, tRFs but not full-length tRNAs can be detected in EVs derived from <italic>Escherichia coli</italic> (<xref ref-type="bibr" rid="B30">Ghosal et al., 2015</xref>), while EVs from other bacterial species are enriched in intergenic regions, rRNAs, mRNAs, and other non-coding RNAs (<xref ref-type="bibr" rid="B80">Sj&#x00F6;str&#x00F6;m et al., 2015</xref>; <xref ref-type="bibr" rid="B57">Malabirade et al., 2018</xref>). An interest in bacterial exRNAs is emerging given their potential role in bacterial&#x2013;host interactions (<xref ref-type="bibr" rid="B91">Tosar and Cayota, 2020</xref>). Likewise, exRNA biology in host&#x2013;parasite interaction is gaining attention with reports on protozoan parasites that can release EVs containing, among other RNA species, ex-tRFs that can be taken up by, and exert biological functions in mammalian cells (<xref ref-type="bibr" rid="B29">Garcia-Silva et al., 2014</xref>). Finally, the ex-RNA composition of EVs in helminths also seems to be species-specific. While ex-tRFs are depleted in EVs from <italic>Heligmosomoides polygyrus</italic> (<xref ref-type="bibr" rid="B13">Buck et al., 2014</xref>), EVs from <italic>Schistosoma mansoni</italic> contain a wide variety of ex-tRFs (<xref ref-type="bibr" rid="B37">Hoy et al., 2014</xref>).</p>
<p>The specific sorting into EVs or RBP needs to be distinguished from how release is regulated. This constitutes an additional layer of complexity in understanding the relationship between intracellular RNA and exRNA dynamics. For instance, increased release of EVs following stress or a physiological stimulus has been reported (<xref ref-type="bibr" rid="B6">Basso et al., 2013</xref>; <xref ref-type="bibr" rid="B113">Yuana et al., 2013</xref>; <xref ref-type="bibr" rid="B18">Chiou et al., 2018</xref>; <xref ref-type="bibr" rid="B71">O&#x2019;Neill et al., 2019</xref>); however, the underlying mechanisms are largely unknown. Likewise, the mechanisms by which non-vesicular RNAs are released have not been explored. It has recently been reported an autophagy-dependent mechanism of secretion of cytoplasmic nucleic acids (<xref ref-type="bibr" rid="B42">Jeppesen et al., 2019</xref>). However, the composition and abundance of cell RNAs are in good correlation with exRNAs in diverse adherent cells, including the DU145 cell line deficient in autophagy (<xref ref-type="bibr" rid="B94">Tosar et al., 2020</xref>), which suggests that other mechanism(s) may be involved in the release on non-EVs exRNA.</p>
<p>Although the exact molecular mechanisms of sorting remain quite elusive, selective charging of exRNAs into EVs has been shown to be mediated by Ago2 and regulated by KRAS-MEK signaling pathway (<xref ref-type="bibr" rid="B14">Cha et al., 2015</xref>; <xref ref-type="bibr" rid="B60">McKenzie et al., 2016</xref>), and association with other RNA binding proteins (RBP) (<xref ref-type="bibr" rid="B26">Fabbiano et al., 2020</xref>) such as ALIX (<xref ref-type="bibr" rid="B39">Iavello et al., 2016</xref>) annexin A2 (<xref ref-type="bibr" rid="B34">Hagiwara et al., 2015</xref>), major vault protein (MVP) (<xref ref-type="bibr" rid="B84">Teng et al., 2017</xref>; <xref ref-type="bibr" rid="B82">Statello et al., 2018</xref>), and HuR (<xref ref-type="bibr" rid="B64">Mukherjee et al., 2016</xref>). It has also been shown that specific motifs in miRNAs (e.g., GGAG and GGCU) are recognized by the chaperone proteins heterogeneous nuclear ribonucleoprotein A2B1 (hnRNPA2B1), heterogeneous nuclear ribonucleoprotein U (hnRNPU), and RNA-interacting protein SYNCRIP, among others, and selectively sorted into EVs (<xref ref-type="bibr" rid="B102">Villarroya-Beltri et al., 2013</xref>; <xref ref-type="bibr" rid="B26">Fabbiano et al., 2020</xref>; <xref ref-type="bibr" rid="B118">Zietzer et al., 2020</xref>). Another mechanism involves the recognition of the miRNA secondary structure by the RNA-binding protein Y-box I (YBX-1), rather than the primary RNA sequence (<xref ref-type="bibr" rid="B78">Shurtleff et al., 2016</xref>). While these studies have been centered in miRNAs, specific motifs recognized by RBP and secondary structures are also present in tRNAs and tRFs, which may similarly facilitate their selective loading into EVs. For example, the precursor tRNA<sup>Ile</sup><sub>AUA</sub> can enter the miRNA biogenesis pathway via interactions with Exportin-5, Dicer, and Ago proteins (<xref ref-type="bibr" rid="B35">Hasler et al., 2016</xref>). Indeed, processing of tRNAs into tRFs often results in the generation of other classes of small RNAs such as miRNAs or piRNAs (<xref ref-type="bibr" rid="B20">Cole et al., 2009</xref>; <xref ref-type="bibr" rid="B46">Keam et al., 2014</xref>), which can be released into the extracellular compartment. For instance, the piRNA piR-61648 is a tRF derived from the 5&#x2032; arm of tRNA<sup>Gly</sup><sub>GCC</sub> and is the most abundant piRNA in human saliva (<xref ref-type="bibr" rid="B70">Ogawa et al., 2013</xref>).</p>
<p>Specific tRFs may be actively loaded into EVs and/or generated within vesicles. For instance, angiogenin (ANG), the nuclease responsible for the generation of specific tRFs under stress conditions is present both inside cells and in EVs (<xref ref-type="bibr" rid="B109">Wei et al., 2017</xref>). This opens a scenario where specific ANG generated tRFs in EVs can have intra- and extracellular origins.</p>
</sec>
<sec id="S4">
<title>Is Capture of Ex-tRNA/tRFs by Recipient Cells Selective?</title>
<p>Extracellular RNA in EVs can be transported into target cells through multiple mechanisms, involving internalization (exosomes) or direct fusion (microvesicles) with the plasma membrane of the target cells. However, the full process involving targeting, entry, and release of the contents into the recipient cell is incompletely characterized (<xref ref-type="bibr" rid="B83">Svensson et al., 2013</xref>; <xref ref-type="bibr" rid="B117">Zhou et al., 2016</xref>; <xref ref-type="bibr" rid="B58">Mathieu et al., 2019</xref>; <xref ref-type="bibr" rid="B116">Zhao et al., 2020</xref>).</p>
<p>It seems that capture and internalization of EVs can occur through passive, non-specific endocytosis, or selective receptor mediated endocytosis. Numerous examples in the literature show that exosomes released from particular cells are captured only by specific types of cells, depending on the presence of membrane factors or receptors (<xref ref-type="bibr" rid="B27">Fitzner et al., 2011</xref>; <xref ref-type="bibr" rid="B19">Chivet et al., 2014</xref>; <xref ref-type="bibr" rid="B65">Mulcahy et al., 2014</xref>). Therefore, vesicular delivery of tRNA and tRF molecules could occur through selective mechanisms involving particular membrane receptors recognized by exosomal ligands. However, a recent study shows that the expression levels of a highly stable Gly- tRNA half in MCF-7 cells are strongly correlated with levels in released EVs and in target cells exposed to EVs, thus favoring a passive release and uptake, at least in this paradigm (<xref ref-type="bibr" rid="B28">G&#x00E1;mbaro et al., 2020</xref>).</p>
<p>Non-vesicular exRNA transport into target cells has been shown for miRNAs associated with HDL, depending on a specific receptor (scavenger receptor class B type 1) (<xref ref-type="bibr" rid="B100">Vickers et al., 2011</xref>). This opens the likely possibility that tRNAs/tRFs complexed with HDL, which are by far more abundant than miRNAs (<xref ref-type="bibr" rid="B94">Tosar et al., 2020</xref>), analogously enter target cells. Uptake of extracellular, vesicular free miRNAs complexed to Ago2 has been shown to occur through binding to Neuropilin-1, which acts as a receptor of this ribonucleoprotein complex (<xref ref-type="bibr" rid="B75">Prud&#x2019;homme et al., 2016</xref>). Selected tRNAs and tRFs have been shown to interact with Ago proteins (<xref ref-type="bibr" rid="B111">Woolnough et al., 2015</xref>; <xref ref-type="bibr" rid="B74">Pong and Gullerova, 2018</xref>), suggesting a comparable capture and internalization process. A number of extracellular RBP exist that may provide analogous scenarios for protection of tRNAs and tRFs, making them potential signaling molecules.</p>
<p>Naked RNA is also captured by cells <italic>in vivo</italic>. For instance, extracellular dsRNAs are internalized by cells via clathrin- (<xref ref-type="bibr" rid="B40">Itoh et al., 2008</xref>) and raftlin-dependent endocytosis (<xref ref-type="bibr" rid="B107">Watanabe et al., 2011</xref>). In addition, the receptor for advanced glycation end-products (RAGE) that is expressed on the cell surface binds to RNA in a sequence-independent manner and enhances uptake into endosomes (<xref ref-type="bibr" rid="B10">Bertheloot et al., 2016</xref>). RAGE internalized RNAs increases the sensitivity to single stranded RNA-sensing Toll-like receptors (TLRs). TLRs localize to the cell surface and/or to endosomes and different TLR types show preferential recognition of ssRNA or dsRNAs, with sequence and/or structural specificities (<xref ref-type="bibr" rid="B52">Liu and Gack, 2020</xref>). For instance, TLR3 is expressed in the plasma membrane of fibroblasts and epithelial cells, and is able to sense extracellular, naked RNA species (<xref ref-type="bibr" rid="B1">Alexopoulou et al., 2001</xref>; <xref ref-type="bibr" rid="B59">Matsumoto et al., 2002</xref>). Although the mechanism is uncertain, spontaneous uptake of Ala- and Cys-5&#x2032; tRNA halves has been shown (<xref ref-type="bibr" rid="B41">Ivanov et al., 2014</xref>). Recent studies have shown that the 3&#x2032; CCACCA sequence of tRNA<sup>Ala</sup><sub>UGC</sub> can be effectively recognized by TLR3 in HEK293 cells and induce immune response (<xref ref-type="bibr" rid="B105">Wang et al., 2006</xref>). Because naked double-stranded tRF heterodimers are so abundant extracellular components, it is tempting to speculate about the possibility that these species activate TLR specifically sensing dsRNAs.</p>
<p>We hypothesize that specific, yet to be identified receptors may exist for ex-tRNA/ex-tRFs free or bound to different RBP with the capacity to internalize these species. Both the carrier (RBP) and the receptor may provide layers of specificity in ex-tRNA/ex-tRFs binding and uptake.</p>
</sec>
<sec id="S5">
<title>Possible Functions of Ex-tRNA/Ex-tRFs: Do They Reflect Trna Metabolism in Producing Cells And/Or Exert a Paracrine Activity?</title>
<p>RNA release to the extracellular compartment does not necessarily involve a functional role of all species as paracrine mediators. However, the high abundance of ex-tRNA/ex-tRFs, with independence on whether they are passively or actively released, favors the idea of an active role of these species in cell-to-cell communication. An extreme case in point is shown for tRFs that can enter the maturing sperm through epididymosomes that are secreted from somatic cells in the epididymis (<xref ref-type="bibr" rid="B21">Conine et al., 2018</xref>), and have been shown to contribute to intergenerational inheritance (<xref ref-type="bibr" rid="B16">Chen et al., 2016</xref>).</p>
<p>Within cells, captured tRFs may trigger a number of signaling cascades that have been validated in cell cultures and/or biochemical approaches, including regulation of gene expression, protein translation, and response to stress (<xref ref-type="bibr" rid="B55">Magee and Rigoutsos, 2020</xref>). Beyond the studies on the effects of tRFs delivered through transfection reagents, increasing evidence suggests a physiological interaction of tRFs with RNA sensors that modulate the innate immune response, as discussed above.</p>
<p>Importantly, even upon efficient cellular uptake, not all internalized exRNAs may be functionally relevant. A major challenge will be to accurately assess the degree of productive and non-productive cellular uptake within recipient cells. For example, endosomal entrapment is a major issue in RNA therapeutics (<xref ref-type="bibr" rid="B23">Crooke et al., 2017</xref>). It is possible that internalized ex-tRNA/ex-tRF could face a similar fate, thus limiting their functional potential. Because the mechanisms of cellular uptake could influence their intracellular trafficking (<xref ref-type="bibr" rid="B44">Juliano et al., 2014</xref>), we propose that ex-tRNA/ex-tRNA function should be evaluated in the context of their mechanisms of delivery, uptake, and intracellular trafficking.</p>
</sec>
<sec id="S6">
<title>A Role for tRNA Modifications in Ex-tRNA/Ex-tRF Biology?</title>
<p>tRNAs are the most heavily post-transcriptionally modified nucleic acids in the cell. To date, more than 150 different chemical modifications have been found in tRNAs (<xref ref-type="bibr" rid="B12">Boccaletto et al., 2018</xref>), where they play important roles in tRNA structure, stability, and function (<xref ref-type="bibr" rid="B72">Pan, 2018</xref>). It is thus possible that tRNA modifications may also be involved in regulating ex-tRNA/ex-tRF generation, stability, uptake, and function.</p>
<p>tRNA modifications can protect tRNAs and tRFs from cleavage or degradation. For instance, 5-methylcytosine (m5C) that is present in several tRNAs can prevent tRNA cleavage by ANG and modulate tRNA processing into tRFs (<xref ref-type="bibr" rid="B96">Tuorto et al., 2012</xref>; <xref ref-type="bibr" rid="B11">Blanco et al., 2014</xref>). Likewise, 2&#x2032;-<italic>O</italic>-methylated (2&#x2032;-OMe) nucleotides, which are abundant in tRNAs, are usually not recognized by RNases and are frequently used in RNA therapeutics to prevent oligonucleotide degradation (<xref ref-type="bibr" rid="B47">Khvorova and Watts, 2017</xref>). In an analogous manner, these modified residues could be protecting tRNAs and tRFs from nucleolytic cleavage (<xref ref-type="bibr" rid="B69">Oberbauer and Schaefer, 2018</xref>). In addition, chemical modifications such as 2&#x2032;-OMe increase the melting temperature of RNA:RNA duplexes (<xref ref-type="bibr" rid="B56">Majlessi et al., 1998</xref>). It is plausible that in the context of ex-tRF stability, such modifications may not only be maintaining ex-tRF integrity but also be promoting ex-tRF duplex formation.</p>
<p>As discussed above, naked RNA can be recognized by cell surface receptors and be internalized. We speculate that tRNA modifications can also affect cellular uptake of ex-tRNA/ex-tRFs. Interestingly, patterns of RNA modification can serve as the basis for discrimination between self and non-self RNAs. Bacterial tRNAs were shown to stimulate the innate immune system via TLR7, and a 2&#x2032;-OMe modification at position 18 of bacterial tRNAs was sufficient to abolish this immunostimulatory effect (<xref ref-type="bibr" rid="B43">J&#x00F6;ckel et al., 2012</xref>). We note that TLR7 is not localized to the cell surface, but the abovementioned example indicates that tRNA modifications can alter receptor-mediated tRNA recognition. Indeed, different modifications in other classes of RNAs have also been shown to abolish signaling through TLRs (<xref ref-type="bibr" rid="B45">Karik&#x00F3; et al., 2005</xref>). Furthermore, extracellular single-stranded inosine-containing RNAs are internalized in epithelial cells by scavenger receptor class-A-mediated endocytosis (<xref ref-type="bibr" rid="B51">Liao et al., 2011</xref>). Inosine is commonly found at position 34 of tRNAs (<xref ref-type="bibr" rid="B88">Torres et al., 2014b</xref>, <xref ref-type="bibr" rid="B89">Torres et al., 2015</xref>), and can induce cleavage of tRNAs mediated by Endonuclease V (<xref ref-type="bibr" rid="B63">Morita et al., 2013</xref>; <xref ref-type="bibr" rid="B101">Vik et al., 2013</xref>). Thus, inosine may represent an example of a tRNA modification that could regulate both tRF formation and ex-tRF internalization.</p>
<p>Lastly, tRNA modifications can also serve as recognition elements for RBPs. For example, several tRNA modifications are important for their efficient recognition by aminoacyl tRNA synthetases (that charge tRNAs with their appropriate amino acid), while others such as 1-methyladenosine at position 58 of tRNAs modulate tRNA affinity for the elongation factor 1A (that delivers tRNAs to the ribosomal A-site for protein synthesis) (<xref ref-type="bibr" rid="B72">Pan, 2018</xref>). In the context of extravesicular ex-tRNA/ex-tRFs, one could imagine that tRNA modifications could modulate ex-tRNA/ex-tRF binding to potential partners. Sera of patients suffering from myositis contain autoantibodies of the anti-PL-12 type that interact with the anticodon loop of human tRNA<sup>Ala</sup><sub>AGC</sub>. Interestingly, two modifications present in this tRNA (inosine at position 34 and <italic>N</italic><sup>1</sup>-methylinosine at position 37 in the anticodon loop) are major epitopes for these autoantibodies (<xref ref-type="bibr" rid="B8">Becker et al., 1999</xref>). This suggests that tRNA modifications within ex-tRNAs may play a role in the interaction of such ex-tRNAs with the immune system. In addition, tRNA modifications may at least be important for ex-tRNA/ex-tRF function within recipient cells.</p>
</sec>
<sec id="S7">
<title>Discussion</title>
<p>tRNAs have received strong attention in the recent years with new assigned functions besides the canonical role as genetic code decoders in protein translation. Their participation as modulators of translation (<xref ref-type="bibr" rid="B110">Wilusz, 2015</xref>) and adaptation to stress (<xref ref-type="bibr" rid="B48">Kirchner and Ignatova, 2015</xref>) is complemented with the finding that tRNAs can be actively processed to smaller, bioactive fragments (<xref ref-type="bibr" rid="B55">Magee and Rigoutsos, 2020</xref>). Specific types of tRFs cannot be envisioned as by-products of tRNA turnover and mounting evidence reveal them as a novel class of sRNAs that regulate gene expression through multiple mechanisms.</p>
<p>The regulatory activities of tRNAs and tRFs modulate cell signaling and are correlated with human disease. For instance, increased levels of specific tRNAs promote metastatic progression by inducing the expression of particular proteins (<xref ref-type="bibr" rid="B32">Goodarzi et al., 2016</xref>). tRF expression dynamics also participate in disease processes, through the regulation of apoptosis, protein synthesis, and/or RNA interference (<xref ref-type="bibr" rid="B81">Soares and Santos, 2017</xref>). In addition, tRNA/tRF activity is modulated by tRNA modifications, thus defective tRNA modifications have also been associated to complex diseases such as cancer, type 2 diabetes, and neurological disorders (<xref ref-type="bibr" rid="B87">Torres et al., 2014a</xref>).</p>
<p>The complexity of tRNAs/tRFs biology, physiology, and pathology is further magnified by their release to the extracellular space, depending on the status of the cell of origin. Emerging evidence suggests that tRNA and tRFs are among the most abundant species in biofluids and in cell culture media, both within EVs and especially outside EVs. Although many studies point toward a regulated sorting and release of tRNA/tRFs, the data presented here suggest that the complexity of the non-vesicular ex-tRNAs/ex-tRFs does not necessarily correlate with a differential release. Instead, it may reflect an interplay between the intracellular RNA composition, its passive and non-passive extrusion, and the abundance and types of extracellular RNases.</p>
<p>In thinking of a productive effect of particular types of exRNAs in target cells, the number of internalized molecules is an important factor. It has been suggested that the few copies of miRNAs in biofluid exosomes make them unlikely molecules activating signaling in target cells (<xref ref-type="bibr" rid="B17">Chevillet et al., 2014</xref>). However, the strong abundance of tRNAs and tRFs in the extracellular compartment points them as likely actors in cell-to-cell communication. It has been recently shown that the overexpression of tRNA halves resistant to degradation is sufficient to trigger their encapsulation into EVs and delivery to target cells (<xref ref-type="bibr" rid="B28">G&#x00E1;mbaro et al., 2020</xref>). Because stable tRNA halves are highly produced in cells under stress conditions through the activity of ANG (<xref ref-type="bibr" rid="B112">Yamasaki et al., 2009</xref>), it is easy to imagine that upon release, recipient cells could sense these types of tRFs as a sign of stress. For non-vesicular tRFs more exposed to RNases, stability may be especially relevant for productive signaling in target cells. While the less stable tRNAs/tRFs have opportunities to target cells nearby, the more stable and abundant tRFs may induce signaling at more distant places.</p>
<p>With independence on the mechanism of release, stability, and possible biological activity, it is worth mentioning that the high abundance of tRFs in biofluids has opened an active field of research in biomarker discovery. The biogenesis of stress linked tRFs is reflected in plasma, with altered profiles in diseases such as cancer (<xref ref-type="bibr" rid="B24">Dhahbi et al., 2014</xref>; <xref ref-type="bibr" rid="B104">Wang et al., 2020</xref>) or epilepsy (<xref ref-type="bibr" rid="B36">Hogg et al., 2019</xref>). This highlights the need to include these species in the definition of prognostic and/or diagnostic biosignatures.</p>
<p>In summary, the significance of ex-tRNA/tRFs is an exciting emerging field in functional biology and translational medicine. Future research needs to expand on the mechanistic basis of (1) tRNA and tRFs sorting into EVs and non-EVs compartments, (2) the regulation of passive versus selective tRNA/tRFs release, and (3) uptake by target cells. The complexity of these studies is enhanced by cell type-specific processes, the influence of highly abundant tRNA modifications, and the need to overcome a number of technical issues to reliably characterize exRNAs.</p>
</sec>
<sec id="S8">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article. Further inquiries can be directed to the corresponding author/s.</p>
</sec>
<sec id="S9">
<title>Author Contributions</title>
<p>AT and EM contributed to the conception of the manuscript and wrote all sections. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> This work was supported by the Spanish government through the Ministerio de Ciencia Innovaci&#x00F3;n y Universidades, Innovation and Universities &#x2013; Agencia Estatal de Investigaci&#x00F3;n and the Fondo Europeo de Desarrollo Regional (FEDER) (Project SAF2017-88452-R to EM).</p>
</fn>
</fn-group>
<ack>
<p>We acknowledge support of the Spanish Ministry of Science Innovation and Universities through the &#x201C;Maria Maeztu Unit of Excellence Program.&#x201D;</p>
</ack>
<ref-list>
<title>References</title>
<ref id="B1"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Alexopoulou</surname> <given-names>L.</given-names></name> <name><surname>Holt</surname> <given-names>A. C.</given-names></name> <name><surname>Medzhitov</surname> <given-names>R.</given-names></name> <name><surname>Flavell</surname> <given-names>R. A.</given-names></name></person-group> (<year>2001</year>). <article-title>Recognition of double-stranded RNA and activation of NF-kappaB by Toll-like receptor 3.</article-title> <source><italic>Nature</italic></source> <volume>413</volume> <fpage>732</fpage>&#x2013;<lpage>738</lpage>. <pub-id pub-id-type="doi">10.1038/35099560</pub-id> <pub-id pub-id-type="pmid">11607032</pub-id></citation></ref>
<ref id="B2"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Alves</surname> <given-names>L. R.</given-names></name> <name><surname>Peres da Silva</surname> <given-names>R.</given-names></name> <name><surname>Sanchez</surname> <given-names>D. A.</given-names></name> <name><surname>Zamith-Miranda</surname> <given-names>D.</given-names></name> <name><surname>Rodrigues</surname> <given-names>M. L.</given-names></name><etal/></person-group> (<year>2019</year>). <article-title>Extracellular vesicle-Mediated RNA release in <italic>Histoplasma capsulatum</italic>.</article-title> <source><italic>mSphere</italic></source> <volume>4</volume>:<issue>e00176-119</issue>. <pub-id pub-id-type="doi">10.1128/mSphere.00176-119</pub-id></citation></ref>
<ref id="B3"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Arroyo</surname> <given-names>J. D.</given-names></name> <name><surname>Chevillet</surname> <given-names>J. R.</given-names></name> <name><surname>Kroh</surname> <given-names>E. M.</given-names></name> <name><surname>Ruf</surname> <given-names>I. K.</given-names></name> <name><surname>Pritchard</surname> <given-names>C. C.</given-names></name> <name><surname>Gibson</surname> <given-names>D. F.</given-names></name><etal/></person-group> (<year>2011</year>). <article-title>Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma.</article-title> <source><italic>Proc. Natl. Acad. Sci. U S A.</italic></source> <volume>108</volume> <fpage>5003</fpage>&#x2013;<lpage>5008</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1019055108</pub-id> <pub-id pub-id-type="pmid">21383194</pub-id></citation></ref>
<ref id="B4"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Avcilar-Kucukgoze</surname> <given-names>I.</given-names></name> <name><surname>Kashina</surname> <given-names>A.</given-names></name></person-group> (<year>2020</year>). <article-title>Hijacking tRNAs from translation: regulatory functions of tRNAs in mammalian cell physiology.</article-title> <source><italic>Front. Mol. Biosci.</italic></source> <volume>7</volume>:<issue>610617</issue>. <pub-id pub-id-type="doi">10.3389/fmolb.2020.610617</pub-id> <pub-id pub-id-type="pmid">33392265</pub-id></citation></ref>
<ref id="B5"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Baglio</surname> <given-names>S. R.</given-names></name> <name><surname>Rooijers</surname> <given-names>K.</given-names></name> <name><surname>Koppers-Lalic</surname> <given-names>D.</given-names></name> <name><surname>Verweij</surname> <given-names>F. J.</given-names></name> <name><surname>Perez Lanzon</surname> <given-names>M.</given-names></name> <name><surname>Zini</surname> <given-names>N.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Human bone marrow- and adipose-mesenchymal stem cells secrete exosomes enriched in distinctive miRNA and tRNA species.</article-title> <source><italic>Stem Cell Res. Ther.</italic></source> <volume>6</volume>:<issue>127</issue>. <pub-id pub-id-type="doi">10.1186/s13287-015-0116-z</pub-id> <pub-id pub-id-type="pmid">26129847</pub-id></citation></ref>
<ref id="B6"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Basso</surname> <given-names>M.</given-names></name> <name><surname>Pozzi</surname> <given-names>S.</given-names></name> <name><surname>Tortarolo</surname> <given-names>M.</given-names></name> <name><surname>Fiordaliso</surname> <given-names>F.</given-names></name> <name><surname>Bisighini</surname> <given-names>C.</given-names></name> <name><surname>Pasetto</surname> <given-names>L.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Mutant copper-zinc superoxide dismutase (SOD1) induces protein secretion pathway alterations and exosome release in astrocytes: implications for disease spreading and motor neuron pathology in amyotrophic lateral sclerosis.</article-title> <source><italic>J. Biol. Chem.</italic></source> <volume>288</volume> <fpage>15699</fpage>&#x2013;<lpage>15711</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M112.425066</pub-id> <pub-id pub-id-type="pmid">23592792</pub-id></citation></ref>
<ref id="B7"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bayer-Santos</surname> <given-names>E.</given-names></name> <name><surname>Lima</surname> <given-names>F. M.</given-names></name> <name><surname>Ruiz</surname> <given-names>J. C.</given-names></name> <name><surname>Almeida</surname> <given-names>C.</given-names> <suffix>I</suffix></name> <name><surname>da Silveira</surname> <given-names>J. F.</given-names></name></person-group> (<year>2014</year>). <article-title>Characterization of the small RNA content of <italic>Trypanosoma cruzi</italic> extracellular vesicles.</article-title> <source><italic>Mol. Biochem. Parasitol.</italic></source> <volume>193</volume> <fpage>71</fpage>&#x2013;<lpage>74</lpage>. <pub-id pub-id-type="doi">10.1016/j.molbiopara.2014.02.004</pub-id> <pub-id pub-id-type="pmid">24583081</pub-id></citation></ref>
<ref id="B8"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Becker</surname> <given-names>H. F.</given-names></name> <name><surname>Corda</surname> <given-names>Y.</given-names></name> <name><surname>Mathews</surname> <given-names>M. B.</given-names></name> <name><surname>Fourrey</surname> <given-names>J. L.</given-names></name> <name><surname>Grosjean</surname> <given-names>H.</given-names></name></person-group> (<year>1999</year>). <article-title>Inosine and N1-methylinosine within a synthetic oligomer mimicking the anticodon loop of human tRNA(Ala) are major epitopes for anti-PL-12 myositis autoantibodies.</article-title> <source><italic>RNA</italic></source> <volume>5</volume> <fpage>865</fpage>&#x2013;<lpage>875</lpage>.</citation></ref>
<ref id="B9"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bellingham</surname> <given-names>S. A.</given-names></name> <name><surname>Coleman</surname> <given-names>B. M.</given-names></name> <name><surname>Hill</surname> <given-names>A. F.</given-names></name></person-group> (<year>2012</year>). <article-title>Small RNA deep sequencing reveals a distinct miRNA signature released in exosomes from prion-infected neuronal cells.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>40</volume> <fpage>10937</fpage>&#x2013;<lpage>10949</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gks832</pub-id> <pub-id pub-id-type="pmid">22965126</pub-id></citation></ref>
<ref id="B10"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bertheloot</surname> <given-names>D.</given-names></name> <name><surname>Naumovski</surname> <given-names>A. L.</given-names></name> <name><surname>Langhoff</surname> <given-names>P.</given-names></name> <name><surname>Horvath</surname> <given-names>G. L.</given-names></name> <name><surname>Jin</surname> <given-names>T.</given-names></name> <name><surname>Xiao</surname> <given-names>T. S.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>RAGE enhances TLR responses through binding and internalization of RNA.</article-title> <source><italic>J. Immunol.</italic></source> <volume>197</volume> <fpage>4118</fpage>&#x2013;<lpage>4126</lpage>. <pub-id pub-id-type="doi">10.4049/jimmunol.1502169</pub-id> <pub-id pub-id-type="pmid">27798148</pub-id></citation></ref>
<ref id="B11"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Blanco</surname> <given-names>S.</given-names></name> <name><surname>Dietmann</surname> <given-names>S.</given-names></name> <name><surname>Flores</surname> <given-names>J. V.</given-names></name> <name><surname>Hussain</surname> <given-names>S.</given-names></name> <name><surname>Kutter</surname> <given-names>C.</given-names></name> <name><surname>Humphreys</surname> <given-names>P.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders.</article-title> <source><italic>EMBO J.</italic></source> <volume>33</volume> <fpage>2020</fpage>&#x2013;<lpage>2039</lpage>. <pub-id pub-id-type="doi">10.15252/embj.201489282</pub-id> <pub-id pub-id-type="pmid">25063673</pub-id></citation></ref>
<ref id="B12"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Boccaletto</surname> <given-names>P.</given-names></name> <name><surname>Machnicka</surname> <given-names>M. A.</given-names></name> <name><surname>Purta</surname> <given-names>E.</given-names></name> <name><surname>Piatkowski</surname> <given-names>P.</given-names></name> <name><surname>Baginski</surname> <given-names>B.</given-names></name> <name><surname>Wirecki</surname> <given-names>T. K.</given-names></name><etal/></person-group> (<year>2018</year>). <article-title>MODOMICS: a database of RNA modification pathways. 2017 update.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>46</volume> <fpage>D303</fpage>&#x2013;<lpage>D307</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkx1030</pub-id> <pub-id pub-id-type="pmid">29106616</pub-id></citation></ref>
<ref id="B13"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Buck</surname> <given-names>A. H.</given-names></name> <name><surname>Coakley</surname> <given-names>G.</given-names></name> <name><surname>Simbari</surname> <given-names>F.</given-names></name> <name><surname>McSorley</surname> <given-names>H. J.</given-names></name> <name><surname>Quintana</surname> <given-names>J. F.</given-names></name> <name><surname>Le Bihan</surname> <given-names>T.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>5</volume>:<issue>5488</issue>. <pub-id pub-id-type="doi">10.1038/ncomms6488</pub-id> <pub-id pub-id-type="pmid">25421927</pub-id></citation></ref>
<ref id="B14"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cha</surname> <given-names>D. J.</given-names></name> <name><surname>Franklin</surname> <given-names>J. L.</given-names></name> <name><surname>Dou</surname> <given-names>Y.</given-names></name> <name><surname>Liu</surname> <given-names>Q.</given-names></name> <name><surname>Higginbotham</surname> <given-names>J. N.</given-names></name> <name><surname>Demory Beckler</surname> <given-names>M.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>KRAS-dependent sorting of miRNA to exosomes.</article-title> <source><italic>eLife</italic></source> <volume>4</volume>:<issue>e07197</issue>. <pub-id pub-id-type="doi">10.7554/eLife.07197</pub-id> <pub-id pub-id-type="pmid">26132860</pub-id></citation></ref>
<ref id="B15"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chakrabortty</surname> <given-names>S. K.</given-names></name> <name><surname>Prakash</surname> <given-names>A.</given-names></name> <name><surname>Nechooshtan</surname> <given-names>G.</given-names></name> <name><surname>Hearn</surname> <given-names>S.</given-names></name> <name><surname>Gingeras</surname> <given-names>T. R.</given-names></name></person-group> (<year>2015</year>). <article-title>Extracellular vesicle-mediated transfer of processed and functional RNY5 RNA.</article-title> <source><italic>RNA</italic></source> <volume>21</volume> <fpage>1966</fpage>&#x2013;<lpage>1979</lpage>. <pub-id pub-id-type="doi">10.1261/rna.053629.115</pub-id> <pub-id pub-id-type="pmid">26392588</pub-id></citation></ref>
<ref id="B16"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>Q.</given-names></name> <name><surname>Yan</surname> <given-names>M.</given-names></name> <name><surname>Cao</surname> <given-names>Z.</given-names></name> <name><surname>Li</surname> <given-names>X.</given-names></name> <name><surname>Zhang</surname> <given-names>Y.</given-names></name> <name><surname>Shi</surname> <given-names>J.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>Sperm tsRNAs contribute to intergenerational inheritance of an acquired metabolic disorder.</article-title> <source><italic>Science</italic></source> <volume>351</volume> <fpage>397</fpage>&#x2013;<lpage>400</lpage>. <pub-id pub-id-type="doi">10.1126/science.aad7977</pub-id> <pub-id pub-id-type="pmid">26721680</pub-id></citation></ref>
<ref id="B17"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chevillet</surname> <given-names>J. R.</given-names></name> <name><surname>Kang</surname> <given-names>Q.</given-names></name> <name><surname>Ruf</surname> <given-names>I. K.</given-names></name> <name><surname>Briggs</surname> <given-names>H. A.</given-names></name> <name><surname>Vojtech</surname> <given-names>L. N.</given-names></name> <name><surname>Hughes</surname> <given-names>S. M.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Quantitative and stoichiometric analysis of the microRNA content of exosomes.</article-title> <source><italic>Proc. Natl. Acad. Sci. U S A.</italic></source> <volume>111</volume> <fpage>14888</fpage>&#x2013;<lpage>14893</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1408301111</pub-id> <pub-id pub-id-type="pmid">25267620</pub-id></citation></ref>
<ref id="B18"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chiou</surname> <given-names>N. T.</given-names></name> <name><surname>Kageyama</surname> <given-names>R.</given-names></name> <name><surname>Ansel</surname> <given-names>K. M.</given-names></name></person-group> (<year>2018</year>). <article-title>Selective export into extracellular vesicles and function of tRNA fragments during T cell activation.</article-title> <source><italic>Cell Rep.</italic></source> <volume>25</volume> <fpage>3356</fpage>&#x2013;<lpage>3370.e4</lpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2018.11.073</pub-id> <pub-id pub-id-type="pmid">30566862</pub-id></citation></ref>
<ref id="B19"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chivet</surname> <given-names>M.</given-names></name> <name><surname>Javalet</surname> <given-names>C.</given-names></name> <name><surname>Laulagnier</surname> <given-names>K.</given-names></name> <name><surname>Blot</surname> <given-names>B.</given-names></name> <name><surname>Hemming</surname> <given-names>F. J.</given-names></name> <name><surname>Sadoul</surname> <given-names>R.</given-names></name></person-group> (<year>2014</year>). <article-title>Exosomes secreted by cortical neurons upon glutamatergic synapse activation specifically interact with neurons.</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>3</volume>:<issue>24722</issue>. <pub-id pub-id-type="doi">10.3402/jev.v3.24722</pub-id> <pub-id pub-id-type="pmid">25398455</pub-id></citation></ref>
<ref id="B20"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cole</surname> <given-names>C.</given-names></name> <name><surname>Sobala</surname> <given-names>A.</given-names></name> <name><surname>Lu</surname> <given-names>C.</given-names></name> <name><surname>Thatcher</surname> <given-names>S. R.</given-names></name> <name><surname>Bowman</surname> <given-names>A.</given-names></name> <name><surname>Brown</surname> <given-names>J. W.</given-names></name><etal/></person-group> (<year>2009</year>). <article-title>Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs.</article-title> <source><italic>RNA</italic></source> <volume>15</volume> <fpage>2147</fpage>&#x2013;<lpage>2160</lpage>. <pub-id pub-id-type="doi">10.1261/rna.1738409</pub-id> <pub-id pub-id-type="pmid">19850906</pub-id></citation></ref>
<ref id="B21"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Conine</surname> <given-names>C. C.</given-names></name> <name><surname>Sun</surname> <given-names>F.</given-names></name> <name><surname>Song</surname> <given-names>L.</given-names></name> <name><surname>Rivera-Perez</surname> <given-names>J. A.</given-names></name> <name><surname>Rando</surname> <given-names>O. J.</given-names></name></person-group> (<year>2018</year>). <article-title>Small RNAs gained during epididymal transit of sperm are essential for embryonic development in mice.</article-title> <source><italic>Dev. Cell</italic></source> <volume>46</volume> <fpage>470</fpage>&#x2013;<lpage>480.e3</lpage>. <pub-id pub-id-type="doi">10.1016/j.devcel.2018.06.024</pub-id> <pub-id pub-id-type="pmid">30057276</pub-id></citation></ref>
<ref id="B22"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Crescitelli</surname> <given-names>R.</given-names></name> <name><surname>Lasser</surname> <given-names>C.</given-names></name> <name><surname>Szabo</surname> <given-names>T. G.</given-names></name> <name><surname>Kittel</surname> <given-names>A.</given-names></name> <name><surname>Eldh</surname> <given-names>M.</given-names></name> <name><surname>Dianzani</surname> <given-names>I.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Distinct RNA profiles in subpopulations of extracellular vesicles: apoptotic bodies, microvesicles and exosomes.</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>2</volume>:<issue>20677</issue>. <pub-id pub-id-type="doi">10.3402/jev.v2i0.20677</pub-id> <pub-id pub-id-type="pmid">24223256</pub-id></citation></ref>
<ref id="B23"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Crooke</surname> <given-names>S. T.</given-names></name> <name><surname>Wang</surname> <given-names>S.</given-names></name> <name><surname>Vickers</surname> <given-names>T. A.</given-names></name> <name><surname>Shen</surname> <given-names>W.</given-names></name> <name><surname>Liang</surname> <given-names>X. H.</given-names></name></person-group> (<year>2017</year>). <article-title>Cellular uptake and trafficking of antisense oligonucleotides.</article-title> <source><italic>Nat. Biotechnol.</italic></source> <volume>35</volume> <fpage>230</fpage>&#x2013;<lpage>237</lpage>. <pub-id pub-id-type="doi">10.1038/nbt.3779</pub-id> <pub-id pub-id-type="pmid">28244996</pub-id></citation></ref>
<ref id="B24"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dhahbi</surname> <given-names>J. M.</given-names></name> <name><surname>Spindler</surname> <given-names>S. R.</given-names></name> <name><surname>Atamna</surname> <given-names>H.</given-names></name> <name><surname>Boffelli</surname> <given-names>D.</given-names></name> <name><surname>Martin</surname> <given-names>D. I.</given-names></name></person-group> (<year>2014</year>). <article-title>Deep sequencing of serum small RNAs identifies patterns of 5&#x2032; tRNA half and YRNA fragment expression associated with Breast Cancer.</article-title> <source><italic>Biomark Cancer</italic></source> <volume>6</volume> <fpage>37</fpage>&#x2013;<lpage>47</lpage>. <pub-id pub-id-type="doi">10.4137/BIC.S20764</pub-id> <pub-id pub-id-type="pmid">25520563</pub-id></citation></ref>
<ref id="B25"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dhahbi</surname> <given-names>J. M.</given-names></name> <name><surname>Spindler</surname> <given-names>S. R.</given-names></name> <name><surname>Atamna</surname> <given-names>H.</given-names></name> <name><surname>Yamakawa</surname> <given-names>A.</given-names></name> <name><surname>Boffelli</surname> <given-names>D.</given-names></name> <name><surname>Mote</surname> <given-names>P.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>5&#x2032; tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction.</article-title> <source><italic>BMC Genomics</italic></source> <volume>14</volume>:<issue>298</issue>. <pub-id pub-id-type="doi">10.1186/1471-2164-14-298</pub-id> <pub-id pub-id-type="pmid">23638709</pub-id></citation></ref>
<ref id="B26"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fabbiano</surname> <given-names>F.</given-names></name> <name><surname>Corsi</surname> <given-names>J.</given-names></name> <name><surname>Gurrieri</surname> <given-names>E.</given-names></name> <name><surname>Trevisan</surname> <given-names>C.</given-names></name> <name><surname>Notarangelo</surname> <given-names>M.</given-names></name> <name><surname>D&#x2019;Agostino</surname> <given-names>V. G.</given-names></name></person-group> (<year>2020</year>). <article-title>RNA packaging into extracellular vesicles: an orchestra of RNA-binding proteins?</article-title> <source><italic>J. Extracell Vesicles</italic></source> <volume>10</volume>:<issue>e12043</issue>. <pub-id pub-id-type="doi">10.1002/jev2.12043</pub-id> <pub-id pub-id-type="pmid">33391635</pub-id></citation></ref>
<ref id="B27"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fitzner</surname> <given-names>D.</given-names></name> <name><surname>Schnaars</surname> <given-names>M.</given-names></name> <name><surname>van Rossum</surname> <given-names>D.</given-names></name> <name><surname>Krishnamoorthy</surname> <given-names>G.</given-names></name> <name><surname>Dibaj</surname> <given-names>P.</given-names></name> <name><surname>Bakhti</surname> <given-names>M.</given-names></name><etal/></person-group> (<year>2011</year>). <article-title>Selective transfer of exosomes from oligodendrocytes to microglia by macropinocytosis.</article-title> <source><italic>J. Cell Sci.</italic></source> <volume>124</volume>(<issue>Pt 3</issue>), <fpage>447</fpage>&#x2013;<lpage>458</lpage>. <pub-id pub-id-type="doi">10.1242/jcs.074088</pub-id> <pub-id pub-id-type="pmid">21242314</pub-id></citation></ref>
<ref id="B28"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>G&#x00E1;mbaro</surname> <given-names>F.</given-names></name> <name><surname>Li Calzi</surname> <given-names>M.</given-names></name> <name><surname>Fagundez</surname> <given-names>P.</given-names></name> <name><surname>Costa</surname> <given-names>B.</given-names></name> <name><surname>Greif</surname> <given-names>G.</given-names></name> <name><surname>Mallick</surname> <given-names>E.</given-names></name><etal/></person-group> (<year>2020</year>). <article-title>Stable tRNA halves can be sorted into extracellular vesicles and delivered to recipient cells in a concentration-dependent manner.</article-title> <source><italic>RNA Biol.</italic></source> <volume>17</volume> <fpage>1168</fpage>&#x2013;<lpage>1182</lpage>. <pub-id pub-id-type="doi">10.1080/15476286.2019.1708548</pub-id> <pub-id pub-id-type="pmid">31885318</pub-id></citation></ref>
<ref id="B29"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Garcia-Silva</surname> <given-names>M. R.</given-names></name> <name><surname>Cabrera-Cabrera</surname> <given-names>F.</given-names></name> <name><surname>das Neves</surname> <given-names>R. F.</given-names></name> <name><surname>Souto-Padron</surname> <given-names>T.</given-names></name> <name><surname>de Souza</surname> <given-names>W.</given-names></name> <name><surname>Cayota</surname> <given-names>A.</given-names></name></person-group> (<year>2014</year>). <article-title>Gene expression changes induced by <italic>Trypanosoma cruzi</italic> shed microvesicles in mammalian host cells: relevance of tRNA-derived halves.</article-title> <source><italic>Biomed Res. Int.</italic></source> <volume>2014</volume>:<issue>305239</issue>. <pub-id pub-id-type="doi">10.1155/2014/305239</pub-id> <pub-id pub-id-type="pmid">24812611</pub-id></citation></ref>
<ref id="B30"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ghosal</surname> <given-names>A.</given-names></name> <name><surname>Upadhyaya</surname> <given-names>B. B.</given-names></name> <name><surname>Fritz</surname> <given-names>J. V.</given-names></name> <name><surname>Heintz-Buschart</surname> <given-names>A.</given-names></name> <name><surname>Desai</surname> <given-names>M. S.</given-names></name> <name><surname>Yusuf</surname> <given-names>D.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>The extracellular RNA complement of <italic>Escherichia coli</italic>.</article-title> <source><italic>Microbiologyopen</italic></source> <volume>4</volume> <fpage>252</fpage>&#x2013;<lpage>266</lpage>. <pub-id pub-id-type="doi">10.1002/mbo3.235</pub-id> <pub-id pub-id-type="pmid">25611733</pub-id></citation></ref>
<ref id="B31"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Godoy</surname> <given-names>P. M.</given-names></name> <name><surname>Bhakta</surname> <given-names>N. R.</given-names></name> <name><surname>Barczak</surname> <given-names>A. J.</given-names></name> <name><surname>Cakmak</surname> <given-names>H.</given-names></name> <name><surname>Fisher</surname> <given-names>S.</given-names></name> <name><surname>MacKenzie</surname> <given-names>T. C.</given-names></name><etal/></person-group> (<year>2018</year>). <article-title>Large differences in small RNA composition between human biofluids.</article-title> <source><italic>Cell Rep.</italic></source> <volume>25</volume> <fpage>1346</fpage>&#x2013;<lpage>1358</lpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2018.10.014</pub-id> <pub-id pub-id-type="pmid">30380423</pub-id></citation></ref>
<ref id="B32"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Goodarzi</surname> <given-names>H.</given-names></name> <name><surname>Nguyen</surname> <given-names>H. C. B.</given-names></name> <name><surname>Zhang</surname> <given-names>S.</given-names></name> <name><surname>Dill</surname> <given-names>B. D.</given-names></name> <name><surname>Molina</surname> <given-names>H.</given-names></name> <name><surname>Tavazoie</surname> <given-names>S. F.</given-names></name></person-group> (<year>2016</year>). <article-title>Modulated expression of specific tRNAs drives gene expression and cancer progression.</article-title> <source><italic>Cell</italic></source> <volume>165</volume> <fpage>1416</fpage>&#x2013;<lpage>1427</lpage>. <pub-id pub-id-type="doi">10.1016/j.cell.2016.05.046</pub-id> <pub-id pub-id-type="pmid">27259150</pub-id></citation></ref>
<ref id="B33"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Guzman</surname> <given-names>N.</given-names></name> <name><surname>Agarwal</surname> <given-names>K.</given-names></name> <name><surname>Asthagiri</surname> <given-names>D.</given-names></name> <name><surname>Yu</surname> <given-names>L.</given-names></name> <name><surname>Saji</surname> <given-names>M.</given-names></name> <name><surname>Ringel</surname> <given-names>M. D.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Breast Cancer-Specific miR signature unique to extracellular vesicles includes &#x201C;microRNA-like&#x201D; tRNA Fragments.</article-title> <source><italic>Mol. Cancer Res.</italic></source> <volume>13</volume> <fpage>891</fpage>&#x2013;<lpage>901</lpage>. <pub-id pub-id-type="doi">10.1158/1541-7786.MCR-14-0533</pub-id> <pub-id pub-id-type="pmid">25722304</pub-id></citation></ref>
<ref id="B34"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hagiwara</surname> <given-names>K.</given-names></name> <name><surname>Katsuda</surname> <given-names>T.</given-names></name> <name><surname>Gailhouste</surname> <given-names>L.</given-names></name> <name><surname>Kosaka</surname> <given-names>N.</given-names></name> <name><surname>Ochiya</surname> <given-names>T.</given-names></name></person-group> (<year>2015</year>). <article-title>Commitment of annexin A2 in recruitment of microRNAs into extracellular vesicles.</article-title> <source><italic>FEBS Lett.</italic></source> <volume>589</volume>(24 Pt B), <fpage>4071</fpage>&#x2013;<lpage>4078</lpage>. <pub-id pub-id-type="doi">10.1016/j.febslet.2015.11.036</pub-id> <pub-id pub-id-type="pmid">26632510</pub-id></citation></ref>
<ref id="B35"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hasler</surname> <given-names>D.</given-names></name> <name><surname>Lehmann</surname> <given-names>G.</given-names></name> <name><surname>Murakawa</surname> <given-names>Y.</given-names></name> <name><surname>Klironomos</surname> <given-names>F.</given-names></name> <name><surname>Jakob</surname> <given-names>L.</given-names></name> <name><surname>Grasser</surname> <given-names>F. A.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>The lupus autoantigen la prevents mis-channeling of tRNA fragments into the human MicroRNA pathway.</article-title> <source><italic>Mol. Cell.</italic></source> <volume>63</volume> <fpage>110</fpage>&#x2013;<lpage>124</lpage>. <pub-id pub-id-type="doi">10.1016/j.molcel.2016.05.026</pub-id> <pub-id pub-id-type="pmid">27345152</pub-id></citation></ref>
<ref id="B36"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hogg</surname> <given-names>M. C.</given-names></name> <name><surname>Raoof</surname> <given-names>R.</given-names></name> <name><surname>El Naggar</surname> <given-names>H.</given-names></name> <name><surname>Monsefi</surname> <given-names>N.</given-names></name> <name><surname>Delanty</surname> <given-names>N.</given-names></name> <name><surname>O&#x2019;Brien</surname> <given-names>D. F.</given-names></name><etal/></person-group> (<year>2019</year>). <article-title>Elevation in plasma tRNA fragments precede seizures in human epilepsy.</article-title> <source><italic>J. Clin. Invest.</italic></source> <volume>129</volume> <fpage>2946</fpage>&#x2013;<lpage>2951</lpage>. <pub-id pub-id-type="doi">10.1172/JCI126346</pub-id> <pub-id pub-id-type="pmid">31039137</pub-id></citation></ref>
<ref id="B37"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hoy</surname> <given-names>A. M.</given-names></name> <name><surname>Lundie</surname> <given-names>R. J.</given-names></name> <name><surname>Ivens</surname> <given-names>A.</given-names></name> <name><surname>Quintana</surname> <given-names>J. F.</given-names></name> <name><surname>Nausch</surname> <given-names>N.</given-names></name> <name><surname>Forster</surname> <given-names>T.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Parasite-derived microRNAs in host serum as novel biomarkers of helminth infection.</article-title> <source><italic>PLoS Negl. Trop. Dis.</italic></source> <volume>8</volume>:<issue>e2701</issue>. <pub-id pub-id-type="doi">10.1371/journal.pntd.0002701</pub-id> <pub-id pub-id-type="pmid">24587461</pub-id></citation></ref>
<ref id="B38"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Huang</surname> <given-names>X.</given-names></name> <name><surname>Yuan</surname> <given-names>T.</given-names></name> <name><surname>Tschannen</surname> <given-names>M.</given-names></name> <name><surname>Sun</surname> <given-names>Z.</given-names></name> <name><surname>Jacob</surname> <given-names>H.</given-names></name> <name><surname>Du</surname> <given-names>M.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Characterization of human plasma-derived exosomal RNAs by deep sequencing.</article-title> <source><italic>BMC Genomics</italic></source> <volume>14</volume>:<issue>319</issue>. <pub-id pub-id-type="doi">10.1186/1471-2164-14-319</pub-id> <pub-id pub-id-type="pmid">23663360</pub-id></citation></ref>
<ref id="B39"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Iavello</surname> <given-names>A.</given-names></name> <name><surname>Frech</surname> <given-names>V. S.</given-names></name> <name><surname>Gai</surname> <given-names>C.</given-names></name> <name><surname>Deregibus</surname> <given-names>M. C.</given-names></name> <name><surname>Quesenberry</surname> <given-names>P. J.</given-names></name> <name><surname>Camussi</surname> <given-names>G.</given-names></name></person-group> (<year>2016</year>). <article-title>Role of Alix in miRNA packaging during extracellular vesicle biogenesis.</article-title> <source><italic>Int. J. Mol. Med.</italic></source> <volume>37</volume> <fpage>958</fpage>&#x2013;<lpage>966</lpage>. <pub-id pub-id-type="doi">10.3892/ijmm.2016.2488</pub-id> <pub-id pub-id-type="pmid">26935291</pub-id></citation></ref>
<ref id="B40"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Itoh</surname> <given-names>K.</given-names></name> <name><surname>Watanabe</surname> <given-names>A.</given-names></name> <name><surname>Funami</surname> <given-names>K.</given-names></name> <name><surname>Seya</surname> <given-names>T.</given-names></name> <name><surname>Matsumoto</surname> <given-names>M.</given-names></name></person-group> (<year>2008</year>). <article-title>The clathrin-mediated endocytic pathway participates in dsRNA-induced IFN-beta production.</article-title> <source><italic>J. Immunol.</italic></source> <volume>181</volume> <fpage>5522</fpage>&#x2013;<lpage>5529</lpage>. <pub-id pub-id-type="doi">10.4049/jimmunol.181.8.5522</pub-id> <pub-id pub-id-type="pmid">18832709</pub-id></citation></ref>
<ref id="B41"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ivanov</surname> <given-names>P.</given-names></name> <name><surname>O&#x2019;Day</surname> <given-names>E.</given-names></name> <name><surname>Emara</surname> <given-names>M. M.</given-names></name> <name><surname>Wagner</surname> <given-names>G.</given-names></name> <name><surname>Lieberman</surname> <given-names>J.</given-names></name> <name><surname>Anderson</surname> <given-names>P.</given-names></name></person-group> (<year>2014</year>). <article-title>G-quadruplex structures contribute to the neuroprotective effects of angiogenin-induced tRNA fragments.</article-title> <source><italic>Proc. Natl. Acad. Sci. U S A.</italic></source> <volume>111</volume> <fpage>18201</fpage>&#x2013;<lpage>18206</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1407361111</pub-id> <pub-id pub-id-type="pmid">25404306</pub-id></citation></ref>
<ref id="B42"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jeppesen</surname> <given-names>D. K.</given-names></name> <name><surname>Fenix</surname> <given-names>A. M.</given-names></name> <name><surname>Franklin</surname> <given-names>J. L.</given-names></name> <name><surname>Higginbotham</surname> <given-names>J. N.</given-names></name> <name><surname>Zhang</surname> <given-names>Q.</given-names></name> <name><surname>Zimmerman</surname> <given-names>L. J.</given-names></name><etal/></person-group> (<year>2019</year>). <article-title>Reassessment of exosome composition.</article-title> <source><italic>Cell</italic></source> <volume>177</volume> <fpage>428</fpage>&#x2013;<lpage>445.e18</lpage>. <pub-id pub-id-type="doi">10.1016/j.cell.2019.02.029</pub-id> <pub-id pub-id-type="pmid">30951670</pub-id></citation></ref>
<ref id="B43"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>J&#x00F6;ckel</surname> <given-names>S.</given-names></name> <name><surname>Nees</surname> <given-names>G.</given-names></name> <name><surname>Sommer</surname> <given-names>R.</given-names></name> <name><surname>Zhao</surname> <given-names>Y.</given-names></name> <name><surname>Cherkasov</surname> <given-names>D.</given-names></name> <name><surname>Hori</surname> <given-names>H.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>The 2&#x2032;-O-methylation status of a single guanosine controls transfer RNA-mediated Toll-like receptor 7 activation or inhibition.</article-title> <source><italic>J. Exp. Med.</italic></source> <volume>209</volume> <fpage>235</fpage>&#x2013;<lpage>241</lpage>. <pub-id pub-id-type="doi">10.1084/jem.20111075</pub-id> <pub-id pub-id-type="pmid">22312111</pub-id></citation></ref>
<ref id="B44"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Juliano</surname> <given-names>R. L.</given-names></name> <name><surname>Ming</surname> <given-names>X.</given-names></name> <name><surname>Carver</surname> <given-names>K.</given-names></name> <name><surname>Laing</surname> <given-names>B.</given-names></name></person-group> (<year>2014</year>). <article-title>Cellular uptake and intracellular trafficking of oligonucleotides: implications for oligonucleotide pharmacology.</article-title> <source><italic>Nucleic Acid Ther.</italic></source> <volume>24</volume> <fpage>101</fpage>&#x2013;<lpage>113</lpage>. <pub-id pub-id-type="doi">10.1089/nat.2013.0463</pub-id> <pub-id pub-id-type="pmid">24383421</pub-id></citation></ref>
<ref id="B45"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Karik&#x00F3;</surname> <given-names>K.</given-names></name> <name><surname>Buckstein</surname> <given-names>M.</given-names></name> <name><surname>Ni</surname> <given-names>H.</given-names></name> <name><surname>Weissman</surname> <given-names>D.</given-names></name></person-group> (<year>2005</year>). <article-title>Suppression of RNA recognition by Toll-like receptors: the impact of nucleoside modification and the evolutionary origin of RNA.</article-title> <source><italic>Immunity</italic></source> <volume>23</volume> <fpage>165</fpage>&#x2013;<lpage>175</lpage>. <pub-id pub-id-type="doi">10.1016/j.immuni.2005.06.008</pub-id> <pub-id pub-id-type="pmid">16111635</pub-id></citation></ref>
<ref id="B46"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Keam</surname> <given-names>S. P.</given-names></name> <name><surname>Young</surname> <given-names>P. E.</given-names></name> <name><surname>McCorkindale</surname> <given-names>A. L.</given-names></name> <name><surname>Dang</surname> <given-names>T. H.</given-names></name> <name><surname>Clancy</surname> <given-names>J. L.</given-names></name> <name><surname>Humphreys</surname> <given-names>D. T.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>The human Piwi protein Hiwi2 associates with tRNA-derived piRNAs in somatic cells.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>42</volume> <fpage>8984</fpage>&#x2013;<lpage>8995</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gku620</pub-id> <pub-id pub-id-type="pmid">25038252</pub-id></citation></ref>
<ref id="B47"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khvorova</surname> <given-names>A.</given-names></name> <name><surname>Watts</surname> <given-names>J. K.</given-names></name></person-group> (<year>2017</year>). <article-title>The chemical evolution of oligonucleotide therapies of clinical utility.</article-title> <source><italic>Nat. Biotechnol.</italic></source> <volume>35</volume> <fpage>238</fpage>&#x2013;<lpage>248</lpage>. <pub-id pub-id-type="doi">10.1038/nbt.3765</pub-id> <pub-id pub-id-type="pmid">28244990</pub-id></citation></ref>
<ref id="B48"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kirchner</surname> <given-names>S.</given-names></name> <name><surname>Ignatova</surname> <given-names>Z.</given-names></name></person-group> (<year>2015</year>). <article-title>Emerging roles of tRNA in adaptive translation, signalling dynamics and disease.</article-title> <source><italic>Nat. Rev. Genet.</italic></source> <volume>16</volume> <fpage>98</fpage>&#x2013;<lpage>112</lpage>. <pub-id pub-id-type="doi">10.1038/nrg3861</pub-id> <pub-id pub-id-type="pmid">25534324</pub-id></citation></ref>
<ref id="B49"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lambertz</surname> <given-names>U.</given-names></name> <name><surname>Oviedo Ovando</surname> <given-names>M. E.</given-names></name> <name><surname>Vasconcelos</surname> <given-names>E. J.</given-names></name> <name><surname>Unrau</surname> <given-names>P. J.</given-names></name> <name><surname>Myler</surname> <given-names>P. J.</given-names></name> <name><surname>Reiner</surname> <given-names>N. E.</given-names></name></person-group> (<year>2015</year>). <article-title>Small RNAs derived from tRNAs and rRNAs are highly enriched in exosomes from both old and new world Leishmania providing evidence for conserved exosomal RNA Packaging.</article-title> <source><italic>BMC Genomics</italic></source> <volume>16</volume>:<issue>151</issue>. <pub-id pub-id-type="doi">10.1186/s12864-015-1260-1267</pub-id></citation></ref>
<ref id="B50"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>L&#x00E4;sser</surname> <given-names>C.</given-names></name> <name><surname>Shelke</surname> <given-names>G. V.</given-names></name> <name><surname>Yeri</surname> <given-names>A.</given-names></name> <name><surname>Kim</surname> <given-names>D. K.</given-names></name> <name><surname>Crescitelli</surname> <given-names>R.</given-names></name> <name><surname>Raimondo</surname> <given-names>S.</given-names></name><etal/></person-group> (<year>2017</year>). <article-title>Two distinct extracellular RNA signatures released by a single cell type identified by microarray and next-generation sequencing.</article-title> <source><italic>RNA Biol.</italic></source> <volume>14</volume> <fpage>58</fpage>&#x2013;<lpage>72</lpage>. <pub-id pub-id-type="doi">10.1080/15476286.2016.1249092</pub-id> <pub-id pub-id-type="pmid">27791479</pub-id></citation></ref>
<ref id="B51"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liao</surname> <given-names>J. Y.</given-names></name> <name><surname>Thakur</surname> <given-names>S. A.</given-names></name> <name><surname>Zalinger</surname> <given-names>Z. B.</given-names></name> <name><surname>Gerrish</surname> <given-names>K. E.</given-names></name> <name><surname>Imani</surname> <given-names>F.</given-names></name></person-group> (<year>2011</year>). <article-title>Inosine-containing RNA is a novel innate immune recognition element and reduces RSV infection.</article-title> <source><italic>PLoS One</italic></source> <volume>6</volume>:<issue>e26463</issue>. <pub-id pub-id-type="doi">10.1371/journal.pone.0026463</pub-id> <pub-id pub-id-type="pmid">22028885</pub-id></citation></ref>
<ref id="B52"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>G.</given-names></name> <name><surname>Gack</surname> <given-names>M. U.</given-names></name></person-group> (<year>2020</year>). <article-title>Distinct and orchestrated functions of RNA sensors in innate immunity.</article-title> <source><italic>Immunity</italic></source> <volume>53</volume> <fpage>26</fpage>&#x2013;<lpage>42</lpage>. <pub-id pub-id-type="doi">10.1016/j.immuni.2020.03.017</pub-id> <pub-id pub-id-type="pmid">32668226</pub-id></citation></ref>
<ref id="B53"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lunavat</surname> <given-names>T. R.</given-names></name> <name><surname>Cheng</surname> <given-names>L.</given-names></name> <name><surname>Kim</surname> <given-names>D. K.</given-names></name> <name><surname>Bhadury</surname> <given-names>J.</given-names></name> <name><surname>Jang</surname> <given-names>S. C.</given-names></name> <name><surname>Lasser</surname> <given-names>C.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Small RNA deep sequencing discriminates subsets of extracellular vesicles released by melanoma cells&#x2013;evidence of unique microRNA cargos.</article-title> <source><italic>RNA Biol.</italic></source> <volume>12</volume> <fpage>810</fpage>&#x2013;<lpage>823</lpage>. <pub-id pub-id-type="doi">10.1080/15476286.2015.1056975</pub-id> <pub-id pub-id-type="pmid">26176991</pub-id></citation></ref>
<ref id="B54"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lyons</surname> <given-names>S. M.</given-names></name> <name><surname>Gudanis</surname> <given-names>D.</given-names></name> <name><surname>Coyne</surname> <given-names>S. M.</given-names></name> <name><surname>Gdaniec</surname> <given-names>Z.</given-names></name> <name><surname>Ivanov</surname> <given-names>P.</given-names></name></person-group> (<year>2017</year>). <article-title>Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>8</volume>:<issue>1127</issue>. <pub-id pub-id-type="doi">10.1038/s41467-017-01278-w</pub-id> <pub-id pub-id-type="pmid">29066746</pub-id></citation></ref>
<ref id="B55"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Magee</surname> <given-names>R.</given-names></name> <name><surname>Rigoutsos</surname> <given-names>I.</given-names></name></person-group> (<year>2020</year>). <article-title>On the expanding roles of tRNA fragments in modulating cell behavior.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>48</volume> <fpage>9433</fpage>&#x2013;<lpage>9448</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkaa657</pub-id> <pub-id pub-id-type="pmid">32890397</pub-id></citation></ref>
<ref id="B56"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Majlessi</surname> <given-names>M.</given-names></name> <name><surname>Nelson</surname> <given-names>N. C.</given-names></name> <name><surname>Becker</surname> <given-names>M. M.</given-names></name></person-group> (<year>1998</year>). <article-title>Advantages of 2&#x2032;-O-methyl oligoribonucleotide probes for detecting RNA targets.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>26</volume> <fpage>2224</fpage>&#x2013;<lpage>2229</lpage>. <pub-id pub-id-type="doi">10.1093/nar/26.9.2224</pub-id> <pub-id pub-id-type="pmid">9547284</pub-id></citation></ref>
<ref id="B57"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Malabirade</surname> <given-names>A.</given-names></name> <name><surname>Habier</surname> <given-names>J.</given-names></name> <name><surname>Heintz-Buschart</surname> <given-names>A.</given-names></name> <name><surname>May</surname> <given-names>P.</given-names></name> <name><surname>Godet</surname> <given-names>J.</given-names></name> <name><surname>Halder</surname> <given-names>R.</given-names></name><etal/></person-group> (<year>2018</year>). <article-title>The RNA complement of outer membrane vesicles from <italic>Salmonella enterica</italic> serovar typhimurium under distinct culture conditions.</article-title> <source><italic>Front. Microbiol.</italic></source> <volume>9</volume>:<issue>2015</issue>. <pub-id pub-id-type="doi">10.3389/fmicb.2018.02015</pub-id> <pub-id pub-id-type="pmid">30214435</pub-id></citation></ref>
<ref id="B58"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mathieu</surname> <given-names>M.</given-names></name> <name><surname>Martin-Jaular</surname> <given-names>L.</given-names></name> <name><surname>Lavieu</surname> <given-names>G.</given-names></name> <name><surname>Thery</surname> <given-names>C.</given-names></name></person-group> (<year>2019</year>). <article-title>Specificities of secretion and uptake of exosomes and other extracellular vesicles for cell-to-cell communication.</article-title> <source><italic>Nat. Cell Biol.</italic></source> <volume>21</volume> <fpage>9</fpage>&#x2013;<lpage>17</lpage>. <pub-id pub-id-type="doi">10.1038/s41556-018-0250-259</pub-id></citation></ref>
<ref id="B59"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Matsumoto</surname> <given-names>M.</given-names></name> <name><surname>Kikkawa</surname> <given-names>S.</given-names></name> <name><surname>Kohase</surname> <given-names>M.</given-names></name> <name><surname>Miyake</surname> <given-names>K.</given-names></name> <name><surname>Seya</surname> <given-names>T.</given-names></name></person-group> (<year>2002</year>). <article-title>Establishment of a monoclonal antibody against human Toll-like receptor 3 that blocks double-stranded RNA-mediated signaling.</article-title> <source><italic>Biochem. Biophys. Res. Commun.</italic></source> <volume>293</volume> <fpage>1364</fpage>&#x2013;<lpage>1369</lpage>. <pub-id pub-id-type="doi">10.1016/S0006-291X(02)00380-387</pub-id></citation></ref>
<ref id="B60"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>McKenzie</surname> <given-names>A. J.</given-names></name> <name><surname>Hoshino</surname> <given-names>D.</given-names></name> <name><surname>Hong</surname> <given-names>N. H.</given-names></name> <name><surname>Cha</surname> <given-names>D. J.</given-names></name> <name><surname>Franklin</surname> <given-names>J. L.</given-names></name> <name><surname>Coffey</surname> <given-names>R. J.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>KRAS-MEK signaling controls Ago2 sorting into exosomes.</article-title> <source><italic>Cell Rep.</italic></source> <volume>15</volume> <fpage>978</fpage>&#x2013;<lpage>987</lpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2016.03.085</pub-id> <pub-id pub-id-type="pmid">27117408</pub-id></citation></ref>
<ref id="B61"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Michell</surname> <given-names>D. L.</given-names></name> <name><surname>Allen</surname> <given-names>R. M.</given-names></name> <name><surname>Landstreet</surname> <given-names>S. R.</given-names></name> <name><surname>Zhao</surname> <given-names>S.</given-names></name> <name><surname>Toth</surname> <given-names>C. L.</given-names></name> <name><surname>Sheng</surname> <given-names>Q.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>Isolation of high-density lipoproteins for Non-coding Small RNA quantification.</article-title> <source><italic>J. Vis. Exp.</italic></source> <volume>54488</volume>. <pub-id pub-id-type="doi">10.3791/54488</pub-id> <pub-id pub-id-type="pmid">27929461</pub-id></citation></ref>
<ref id="B62"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mongui&#x00F3;-Tortajada</surname> <given-names>M.</given-names></name> <name><surname>Galvez-Monton</surname> <given-names>C.</given-names></name> <name><surname>Bayes-Genis</surname> <given-names>A.</given-names></name> <name><surname>Roura</surname> <given-names>S.</given-names></name> <name><surname>Borras</surname> <given-names>F. E.</given-names></name></person-group> (<year>2019</year>). <article-title>Extracellular vesicle isolation methods: rising impact of size-exclusion chromatography.</article-title> <source><italic>Cell Mol. Life. Sci</italic></source> <volume>76</volume> <fpage>2369</fpage>&#x2013;<lpage>2382</lpage>. <pub-id pub-id-type="doi">10.1007/s00018-019-03071-y</pub-id> <pub-id pub-id-type="pmid">30891621</pub-id></citation></ref>
<ref id="B63"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Morita</surname> <given-names>Y.</given-names></name> <name><surname>Shibutani</surname> <given-names>T.</given-names></name> <name><surname>Nakanishi</surname> <given-names>N.</given-names></name> <name><surname>Nishikura</surname> <given-names>K.</given-names></name> <name><surname>Iwai</surname> <given-names>S.</given-names></name> <name><surname>Kuraoka</surname> <given-names>I.</given-names></name></person-group> (<year>2013</year>). <article-title>Human endonuclease V is a ribonuclease specific for inosine-containing RNA.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>4</volume>:<issue>2273</issue>. <pub-id pub-id-type="doi">10.1038/ncomms3273</pub-id> <pub-id pub-id-type="pmid">23912718</pub-id></citation></ref>
<ref id="B64"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mukherjee</surname> <given-names>K.</given-names></name> <name><surname>Ghoshal</surname> <given-names>B.</given-names></name> <name><surname>Ghosh</surname> <given-names>S.</given-names></name> <name><surname>Chakrabarty</surname> <given-names>Y.</given-names></name> <name><surname>Shwetha</surname> <given-names>S.</given-names></name> <name><surname>Das</surname> <given-names>S.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>Reversible HuR-microRNA binding controls extracellular export of miR-122 and augments stress response.</article-title> <source><italic>EMBO Rep.</italic></source> <volume>17</volume> <fpage>1184</fpage>&#x2013;<lpage>1203</lpage>. <pub-id pub-id-type="doi">10.15252/embr.201541930</pub-id> <pub-id pub-id-type="pmid">27402548</pub-id></citation></ref>
<ref id="B65"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mulcahy</surname> <given-names>L. A.</given-names></name> <name><surname>Pink</surname> <given-names>R. C.</given-names></name> <name><surname>Carter</surname> <given-names>D. R.</given-names></name></person-group> (<year>2014</year>). <article-title>Routes and mechanisms of extracellular vesicle uptake.</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>3</volume> <pub-id pub-id-type="doi">10.3402/jev.v3.24641</pub-id> <pub-id pub-id-type="pmid">25143819</pub-id></citation></ref>
<ref id="B66"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Murillo</surname> <given-names>O. D.</given-names></name> <name><surname>Thistlethwaite</surname> <given-names>W.</given-names></name> <name><surname>Rozowsky</surname> <given-names>J.</given-names></name> <name><surname>Subramanian</surname> <given-names>S. L.</given-names></name> <name><surname>Lucero</surname> <given-names>R.</given-names></name> <name><surname>Shah</surname> <given-names>N.</given-names></name><etal/></person-group> (<year>2019</year>). <article-title>exRNA atlas analysis reveals distinct extracellular RNA cargo types and their carriers present across human biofluids.</article-title> <source><italic>Cell</italic></source> <volume>177</volume> <fpage>463</fpage>&#x2013;<lpage>477.e15</lpage>. <pub-id pub-id-type="doi">10.1016/j.cell.2019.02.018</pub-id> <pub-id pub-id-type="pmid">30951672</pub-id></citation></ref>
<ref id="B67"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nechooshtan</surname> <given-names>G.</given-names></name> <name><surname>Yunusov</surname> <given-names>D.</given-names></name> <name><surname>Chang</surname> <given-names>K.</given-names></name> <name><surname>Gingeras</surname> <given-names>T. R.</given-names></name></person-group> (<year>2020</year>). <article-title>Processing by RNase 1 forms tRNA halves and distinct Y RNA fragments in the extracellular environment.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>48</volume> <fpage>8035</fpage>&#x2013;<lpage>8049</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkaa526</pub-id> <pub-id pub-id-type="pmid">32609822</pub-id></citation></ref>
<ref id="B68"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nolte-&#x2019;t Hoen</surname> <given-names>E. N.</given-names></name> <name><surname>Buermans</surname> <given-names>H. P.</given-names></name> <name><surname>Waasdorp</surname> <given-names>M.</given-names></name> <name><surname>Stoorvogel</surname> <given-names>W.</given-names></name> <name><surname>Wauben</surname> <given-names>M. H.</given-names></name> <name><surname>t Hoen</surname> <given-names>P. A.</given-names></name></person-group> (<year>2012</year>). <article-title>Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>40</volume> <fpage>9272</fpage>&#x2013;<lpage>9285</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gks658</pub-id> <pub-id pub-id-type="pmid">22821563</pub-id></citation></ref>
<ref id="B69"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Oberbauer</surname> <given-names>V.</given-names></name> <name><surname>Schaefer</surname> <given-names>M. R.</given-names></name></person-group> (<year>2018</year>). <article-title>tRNA-Derived small RNAs: biogenesis, modification, function and potential impact on human disease development.</article-title> <source><italic>Genes (Basel)</italic></source> <volume>9</volume>:<issue>607</issue>. <pub-id pub-id-type="doi">10.3390/genes9120607</pub-id> <pub-id pub-id-type="pmid">30563140</pub-id></citation></ref>
<ref id="B70"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ogawa</surname> <given-names>Y.</given-names></name> <name><surname>Taketomi</surname> <given-names>Y.</given-names></name> <name><surname>Murakami</surname> <given-names>M.</given-names></name> <name><surname>Tsujimoto</surname> <given-names>M.</given-names></name> <name><surname>Yanoshita</surname> <given-names>R.</given-names></name></person-group> (<year>2013</year>). <article-title>Small RNA transcriptomes of two types of exosomes in human whole saliva determined by next generation sequencing.</article-title> <source><italic>Biol. Pharm. Bull.</italic></source> <volume>36</volume> <fpage>66</fpage>&#x2013;<lpage>75</lpage>.</citation></ref>
<ref id="B71"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>O&#x2019;Neill</surname> <given-names>C. P.</given-names></name> <name><surname>Gilligan</surname> <given-names>K. E.</given-names></name> <name><surname>Dwyer</surname> <given-names>R. M.</given-names></name></person-group> (<year>2019</year>). <article-title>Role of extracellular vesicles (EVs) in cell stress response and resistance to cancer therapy.</article-title> <source><italic>Cancers (Basel)</italic></source> <volume>11</volume>:<issue>136</issue>. <pub-id pub-id-type="doi">10.3390/cancers11020136</pub-id> <pub-id pub-id-type="pmid">30682793</pub-id></citation></ref>
<ref id="B72"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pan</surname> <given-names>T.</given-names></name></person-group> (<year>2018</year>). <article-title>Modifications and functional genomics of human transfer RNA.</article-title> <source><italic>Cell Res.</italic></source> <volume>28</volume> <fpage>395</fpage>&#x2013;<lpage>404</lpage>. <pub-id pub-id-type="doi">10.1038/s41422-018-0013-y</pub-id> <pub-id pub-id-type="pmid">29463900</pub-id></citation></ref>
<ref id="B73"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Peres da Silva</surname> <given-names>R.</given-names></name> <name><surname>Puccia</surname> <given-names>R.</given-names></name> <name><surname>Rodrigues</surname> <given-names>M. L.</given-names></name> <name><surname>Oliveira</surname> <given-names>D. L.</given-names></name> <name><surname>Joffe</surname> <given-names>L. S.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Extracellular vesicle-mediated export of fungal RNA.</article-title> <source><italic>Sci. Rep.</italic></source> <volume>5</volume>:<issue>7763</issue>. <pub-id pub-id-type="doi">10.1038/srep07763</pub-id> <pub-id pub-id-type="pmid">25586039</pub-id></citation></ref>
<ref id="B74"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pong</surname> <given-names>S. K.</given-names></name> <name><surname>Gullerova</surname> <given-names>M.</given-names></name></person-group> (<year>2018</year>). <article-title>Noncanonical functions of microRNA pathway enzymes - Drosha, DGCR8, dicer and ago proteins.</article-title> <source><italic>FEBS Lett.</italic></source> <volume>592</volume> <fpage>2973</fpage>&#x2013;<lpage>2986</lpage>. <pub-id pub-id-type="doi">10.1002/1873-3468.13196</pub-id> <pub-id pub-id-type="pmid">30025156</pub-id></citation></ref>
<ref id="B75"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prud&#x2019;homme</surname> <given-names>G. J.</given-names></name> <name><surname>Glinka</surname> <given-names>Y.</given-names></name> <name><surname>Lichner</surname> <given-names>Z.</given-names></name> <name><surname>Yousef</surname> <given-names>G. M.</given-names></name></person-group> (<year>2016</year>). <article-title>Neuropilin-1 is a receptor for extracellular miRNA and AGO2/miRNA complexes and mediates the internalization of miRNAs that modulate cell function.</article-title> <source><italic>Oncotarget</italic></source> <volume>7</volume> <fpage>68057</fpage>&#x2013;<lpage>68071</lpage>. <pub-id pub-id-type="doi">10.18632/oncotarget.10929</pub-id> <pub-id pub-id-type="pmid">27486976</pub-id></citation></ref>
<ref id="B76"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ragusa</surname> <given-names>M.</given-names></name> <name><surname>Barbagallo</surname> <given-names>C.</given-names></name> <name><surname>Cirnigliaro</surname> <given-names>M.</given-names></name> <name><surname>Battaglia</surname> <given-names>R.</given-names></name> <name><surname>Brex</surname> <given-names>D.</given-names></name> <name><surname>Caponnetto</surname> <given-names>A.</given-names></name><etal/></person-group> (<year>2017</year>). <article-title>Asymmetric RNA distribution among cells and their secreted exosomes: biomedical meaning and considerations on diagnostic applications.</article-title> <source><italic>Front. Mol. Biosci.</italic></source> <volume>4</volume>:<issue>66</issue>. <pub-id pub-id-type="doi">10.3389/fmolb.2017.00066</pub-id> <pub-id pub-id-type="pmid">29046875</pub-id></citation></ref>
<ref id="B77"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sadik</surname> <given-names>N.</given-names></name> <name><surname>Cruz</surname> <given-names>L.</given-names></name> <name><surname>Gurtner</surname> <given-names>A.</given-names></name> <name><surname>Rodosthenous</surname> <given-names>R. S.</given-names></name> <name><surname>Dusoswa</surname> <given-names>S. A.</given-names></name> <name><surname>Ziegler</surname> <given-names>O.</given-names></name><etal/></person-group> (<year>2018</year>). <article-title>Extracellular RNAs: a new awareness of old perspectives.</article-title> <source><italic>Methods Mol. Biol.</italic></source> <volume>1740</volume> <fpage>1</fpage>&#x2013;<lpage>15</lpage>. <pub-id pub-id-type="doi">10.1007/978-1-4939-7652-2_1</pub-id></citation></ref>
<ref id="B78"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shurtleff</surname> <given-names>M. J.</given-names></name> <name><surname>Temoche-Diaz</surname> <given-names>M. M.</given-names></name> <name><surname>Karfilis</surname> <given-names>K. V.</given-names></name> <name><surname>Ri</surname> <given-names>S.</given-names></name> <name><surname>Schekman</surname> <given-names>R.</given-names></name></person-group> (<year>2016</year>). <article-title>Y-box protein 1 is required to sort microRNAs into exosomes in cells and in a cell-free reaction.</article-title> <source><italic>eLife</italic></source> <volume>5</volume>:<issue>e19276</issue>. <pub-id pub-id-type="doi">10.7554/eLife.19276</pub-id> <pub-id pub-id-type="pmid">27559612</pub-id></citation></ref>
<ref id="B79"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shurtleff</surname> <given-names>M. J.</given-names></name> <name><surname>Yao</surname> <given-names>J.</given-names></name> <name><surname>Qin</surname> <given-names>Y.</given-names></name> <name><surname>Nottingham</surname> <given-names>R. M.</given-names></name> <name><surname>Temoche-Diaz</surname> <given-names>M. M.</given-names></name> <name><surname>Schekman</surname> <given-names>R.</given-names></name><etal/></person-group> (<year>2017</year>). <article-title>Broad role for YBX1 in defining the small noncoding RNA composition of exosomes.</article-title> <source><italic>Proc. Natl. Acad. Sci. U S A.</italic></source> <volume>114</volume> <fpage>E8987</fpage>&#x2013;<lpage>E8995</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1712108114</pub-id> <pub-id pub-id-type="pmid">29073095</pub-id></citation></ref>
<ref id="B80"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sj&#x00F6;str&#x00F6;m</surname> <given-names>A. E.</given-names></name> <name><surname>Sandblad</surname> <given-names>L.</given-names></name> <name><surname>Uhlin</surname> <given-names>B. E.</given-names></name> <name><surname>Wai</surname> <given-names>S. N.</given-names></name></person-group> (<year>2015</year>). <article-title>Membrane vesicle-mediated release of bacterial RNA.</article-title> <source><italic>Sci. Rep.</italic></source> <volume>5</volume>:<issue>15329</issue>. <pub-id pub-id-type="doi">10.1038/srep15329</pub-id> <pub-id pub-id-type="pmid">26483327</pub-id></citation></ref>
<ref id="B81"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Soares</surname> <given-names>A. R.</given-names></name> <name><surname>Santos</surname> <given-names>M.</given-names></name></person-group> (<year>2017</year>). <article-title>Discovery and function of transfer RNA-derived fragments and their role in disease.</article-title> <source><italic>Wiley Interdiscip. Rev. RNA</italic></source> <volume>8</volume>:<issue>e1423</issue>. <pub-id pub-id-type="doi">10.1002/wrna.1423</pub-id> <pub-id pub-id-type="pmid">28608481</pub-id></citation></ref>
<ref id="B82"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Statello</surname> <given-names>L.</given-names></name> <name><surname>Maugeri</surname> <given-names>M.</given-names></name> <name><surname>Garre</surname> <given-names>E.</given-names></name> <name><surname>Nawaz</surname> <given-names>M.</given-names></name> <name><surname>Wahlgren</surname> <given-names>J.</given-names></name> <name><surname>Papadimitriou</surname> <given-names>A.</given-names></name><etal/></person-group> (<year>2018</year>). <article-title>Identification of RNA-binding proteins in exosomes capable of interacting with different types of RNA: RBP-facilitated transport of RNAs into exosomes.</article-title> <source><italic>PLoS One</italic></source> <volume>13</volume>:<issue>e0195969</issue>. <pub-id pub-id-type="doi">10.1371/journal.pone.0195969</pub-id> <pub-id pub-id-type="pmid">29689087</pub-id></citation></ref>
<ref id="B83"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Svensson</surname> <given-names>K. J.</given-names></name> <name><surname>Christianson</surname> <given-names>H. C.</given-names></name> <name><surname>Wittrup</surname> <given-names>A.</given-names></name> <name><surname>Bourseau-Guilmain</surname> <given-names>E.</given-names></name> <name><surname>Lindqvist</surname> <given-names>E.</given-names></name> <name><surname>Svensson</surname> <given-names>L. M.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Exosome uptake depends on ERK1/2-heat shock protein 27 signaling and lipid Raft-mediated endocytosis negatively regulated by caveolin-1.</article-title> <source><italic>J. Biol. Chem.</italic></source> <volume>288</volume> <fpage>17713</fpage>&#x2013;<lpage>17724</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M112.445403</pub-id> <pub-id pub-id-type="pmid">23653359</pub-id></citation></ref>
<ref id="B84"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Teng</surname> <given-names>Y.</given-names></name> <name><surname>Ren</surname> <given-names>Y.</given-names></name> <name><surname>Hu</surname> <given-names>X.</given-names></name> <name><surname>Mu</surname> <given-names>J.</given-names></name> <name><surname>Samykutty</surname> <given-names>A.</given-names></name> <name><surname>Zhuang</surname> <given-names>X.</given-names></name><etal/></person-group> (<year>2017</year>). <article-title>MVP-mediated exosomal sorting of miR-193a promotes colon cancer progression.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>8</volume>:<issue>14448</issue>. <pub-id pub-id-type="doi">10.1038/ncomms14448</pub-id> <pub-id pub-id-type="pmid">28211508</pub-id></citation></ref>
<ref id="B85"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Th&#x00E9;ry</surname> <given-names>C.</given-names></name> <name><surname>Witwer</surname> <given-names>K. W.</given-names></name> <name><surname>Aikawa</surname> <given-names>E.</given-names></name> <name><surname>Alcaraz</surname> <given-names>M. J.</given-names></name> <name><surname>Anderson</surname> <given-names>J. D.</given-names></name> <name><surname>Andriantsitohaina</surname> <given-names>R.</given-names></name><etal/></person-group> (<year>2018</year>). <article-title>Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the international society for extracellular vesicles and update of the MISEV2014 guidelines.</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>7</volume>:<issue>1535750</issue>. <pub-id pub-id-type="doi">10.1080/20013078.2018.1535750</pub-id> <pub-id pub-id-type="pmid">30637094</pub-id></citation></ref>
<ref id="B86"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thomou</surname> <given-names>T.</given-names></name> <name><surname>Mori</surname> <given-names>M. A.</given-names></name> <name><surname>Dreyfuss</surname> <given-names>J. M.</given-names></name> <name><surname>Konishi</surname> <given-names>M.</given-names></name> <name><surname>Sakaguchi</surname> <given-names>M.</given-names></name> <name><surname>Wolfrum</surname> <given-names>C.</given-names></name><etal/></person-group> (<year>2017</year>). <article-title>Adipose-derived circulating miRNAs regulate gene expression in other tissues.</article-title> <source><italic>Nature</italic></source> <volume>542</volume> <fpage>450</fpage>&#x2013;<lpage>455</lpage>. <pub-id pub-id-type="doi">10.1038/nature21365</pub-id> <pub-id pub-id-type="pmid">28199304</pub-id></citation></ref>
<ref id="B87"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Torres</surname> <given-names>A. G.</given-names></name> <name><surname>Batlle</surname> <given-names>E.</given-names></name> <name><surname>Ribas</surname></name> <name><surname>de Pouplana</surname> <given-names>L.</given-names></name></person-group> (<year>2014a</year>). <article-title>Role of tRNA modifications in human diseases.</article-title> <source><italic>Trends Mol. Med.</italic></source> <volume>20</volume> <fpage>306</fpage>&#x2013;<lpage>314</lpage>. <pub-id pub-id-type="doi">10.1016/j.molmed.2014.01.008</pub-id> <pub-id pub-id-type="pmid">24581449</pub-id></citation></ref>
<ref id="B88"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Torres</surname> <given-names>A. G.</given-names></name> <name><surname>Pineyro</surname> <given-names>D.</given-names></name> <name><surname>Filonava</surname> <given-names>L.</given-names></name> <name><surname>Stracker</surname> <given-names>T. H.</given-names></name> <name><surname>Batlle</surname> <given-names>E.</given-names></name> <name><surname>Ribas</surname></name><etal/></person-group> (<year>2014b</year>). <article-title>A-to-I editing on tRNAs: biochemical, biological and evolutionary implications.</article-title> <source><italic>FEBS Lett.</italic></source> <volume>588</volume> <fpage>4279</fpage>&#x2013;<lpage>4286</lpage>. <pub-id pub-id-type="doi">10.1016/j.febslet.2014.09.025</pub-id> <pub-id pub-id-type="pmid">25263703</pub-id></citation></ref>
<ref id="B89"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Torres</surname> <given-names>A. G.</given-names></name> <name><surname>Pineyro</surname> <given-names>D.</given-names></name> <name><surname>Rodriguez-Escriba</surname> <given-names>M.</given-names></name> <name><surname>Camacho</surname> <given-names>N.</given-names></name> <name><surname>Reina</surname> <given-names>O.</given-names></name> <name><surname>Saint-Leger</surname> <given-names>A.</given-names></name><etal/></person-group> (<year>2015</year>). <article-title>Inosine modifications in human tRNAs are incorporated at the precursor tRNA level.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>43</volume> <fpage>5145</fpage>&#x2013;<lpage>5157</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkv277</pub-id> <pub-id pub-id-type="pmid">25916855</pub-id></citation></ref>
<ref id="B90"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Torres</surname> <given-names>A. G.</given-names></name> <name><surname>Reina</surname> <given-names>O.</given-names></name> <name><surname>Stephan-Otto Attolini</surname> <given-names>C.</given-names></name> <name><surname>Ribas</surname></name> <name><surname>de Pouplana</surname> <given-names>L.</given-names></name></person-group> (<year>2019</year>). <article-title>Differential expression of human tRNA genes drives the abundance of tRNA-derived fragments.</article-title> <source><italic>Proc. Natl. Acad. Sci. U S A.</italic></source> <volume>116</volume> <fpage>8451</fpage>&#x2013;<lpage>8456</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1821120116</pub-id> <pub-id pub-id-type="pmid">30962382</pub-id></citation></ref>
<ref id="B91"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tosar</surname> <given-names>J. P.</given-names></name> <name><surname>Cayota</surname> <given-names>A.</given-names></name></person-group> (<year>2020</year>). <article-title>Extracellular tRNAs and tRNA-derived fragments.</article-title> <source><italic>RNA Biol</italic></source> <volume>17</volume> <fpage>1149</fpage>&#x2013;<lpage>1167</lpage>. <pub-id pub-id-type="doi">10.1080/15476286.2020.1729584</pub-id> <pub-id pub-id-type="pmid">32070197</pub-id></citation></ref>
<ref id="B92"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tosar</surname> <given-names>J. P.</given-names></name> <name><surname>Cayota</surname> <given-names>A.</given-names></name> <name><surname>Eitan</surname> <given-names>E.</given-names></name> <name><surname>Halushka</surname> <given-names>M. K.</given-names></name> <name><surname>Witwer</surname> <given-names>K. W.</given-names></name></person-group> (<year>2017</year>). <article-title>Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>6</volume>:<issue>1272832</issue>. <pub-id pub-id-type="doi">10.1080/20013078.2016.1272832</pub-id> <pub-id pub-id-type="pmid">28326168</pub-id></citation></ref>
<ref id="B93"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tosar</surname> <given-names>J. P.</given-names></name> <name><surname>Gambaro</surname> <given-names>F.</given-names></name> <name><surname>Sanguinetti</surname> <given-names>J.</given-names></name> <name><surname>Bonilla</surname> <given-names>B.</given-names></name> <name><surname>Witwer</surname> <given-names>K. W.</given-names></name> <name><surname>Cayota</surname> <given-names>A.</given-names></name></person-group> (<year>2015</year>). <article-title>Assessment of small RNA sorting into different extracellular fractions revealed by high-throughput sequencing of breast cell lines.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>43</volume> <fpage>5601</fpage>&#x2013;<lpage>5616</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkv432</pub-id> <pub-id pub-id-type="pmid">25940616</pub-id></citation></ref>
<ref id="B94"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tosar</surname> <given-names>J. P.</given-names></name> <name><surname>Segovia</surname> <given-names>M.</given-names></name> <name><surname>Castellano</surname> <given-names>M.</given-names></name> <name><surname>Gambaro</surname> <given-names>F.</given-names></name> <name><surname>Akiyama</surname> <given-names>Y.</given-names></name> <name><surname>Fagundez</surname> <given-names>P.</given-names></name><etal/></person-group> (<year>2020</year>). <article-title>Fragmentation of extracellular ribosomes and tRNAs shapes the extracellular RNAome.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>48</volume> <fpage>12874</fpage>&#x2013;<lpage>12888</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkaa674</pub-id> <pub-id pub-id-type="pmid">32785615</pub-id></citation></ref>
<ref id="B95"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tsatsaronis</surname> <given-names>J. A.</given-names></name> <name><surname>Franch-Arroyo</surname> <given-names>S.</given-names></name> <name><surname>Resch</surname> <given-names>U.</given-names></name> <name><surname>Charpentier</surname> <given-names>E.</given-names></name></person-group> (<year>2018</year>). <article-title>Extracellular vesicle RNA: a universal mediator of microbial communication?</article-title> <source><italic>Trends Microbiol.</italic></source> <volume>26</volume> <fpage>401</fpage>&#x2013;<lpage>410</lpage>. <pub-id pub-id-type="doi">10.1016/j.tim.2018.02.009</pub-id> <pub-id pub-id-type="pmid">29548832</pub-id></citation></ref>
<ref id="B96"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tuorto</surname> <given-names>F.</given-names></name> <name><surname>Liebers</surname> <given-names>R.</given-names></name> <name><surname>Musch</surname> <given-names>T.</given-names></name> <name><surname>Schaefer</surname> <given-names>M.</given-names></name> <name><surname>Hofmann</surname> <given-names>S.</given-names></name> <name><surname>Kellner</surname> <given-names>S.</given-names></name><etal/></person-group> (<year>2012</year>). <article-title>RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis.</article-title> <source><italic>Nat. Struct. Mol. Biol.</italic></source> <volume>19</volume> <fpage>900</fpage>&#x2013;<lpage>905</lpage>. <pub-id pub-id-type="doi">10.1038/nsmb.2357</pub-id> <pub-id pub-id-type="pmid">22885326</pub-id></citation></ref>
<ref id="B97"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Turchinovich</surname> <given-names>A.</given-names></name> <name><surname>Weiz</surname> <given-names>L.</given-names></name> <name><surname>Langheinz</surname> <given-names>A.</given-names></name> <name><surname>Burwinkel</surname> <given-names>B.</given-names></name></person-group> (<year>2011</year>). <article-title>Characterization of extracellular circulating microRNA.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>39</volume> <fpage>7223</fpage>&#x2013;<lpage>7233</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gkr254</pub-id> <pub-id pub-id-type="pmid">21609964</pub-id></citation></ref>
<ref id="B98"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Valadi</surname> <given-names>H.</given-names></name> <name><surname>Ekstrom</surname> <given-names>K.</given-names></name> <name><surname>Bossios</surname> <given-names>A.</given-names></name> <name><surname>Sjostrand</surname> <given-names>M.</given-names></name> <name><surname>Lee</surname> <given-names>J. J.</given-names></name> <name><surname>Lotvall</surname> <given-names>J. O.</given-names></name></person-group> (<year>2007</year>). <article-title>Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.</article-title> <source><italic>Nat. Cell Biol.</italic></source> <volume>9</volume> <fpage>654</fpage>&#x2013;<lpage>659</lpage>. <pub-id pub-id-type="doi">10.1038/ncb1596</pub-id> <pub-id pub-id-type="pmid">17486113</pub-id></citation></ref>
<ref id="B99"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>van Balkom</surname> <given-names>B. W.</given-names></name> <name><surname>Eisele</surname> <given-names>A. S.</given-names></name> <name><surname>Pegtel</surname> <given-names>D. M.</given-names></name> <name><surname>Bervoets</surname> <given-names>S.</given-names></name> <name><surname>Verhaar</surname> <given-names>M. C.</given-names></name></person-group> (<year>2015</year>). <article-title>Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting.</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>4</volume>:<issue>26760</issue>. <pub-id pub-id-type="doi">10.3402/jev.v4.26760</pub-id> <pub-id pub-id-type="pmid">26027894</pub-id></citation></ref>
<ref id="B100"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vickers</surname> <given-names>K. C.</given-names></name> <name><surname>Palmisano</surname> <given-names>B. T.</given-names></name> <name><surname>Shoucri</surname> <given-names>B. M.</given-names></name> <name><surname>Shamburek</surname> <given-names>R. D.</given-names></name> <name><surname>Remaley</surname> <given-names>A. T.</given-names></name></person-group> (<year>2011</year>). <article-title>MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins.</article-title> <source><italic>Nat. Cell Biol.</italic></source> <volume>13</volume> <fpage>423</fpage>&#x2013;<lpage>433</lpage>. <pub-id pub-id-type="doi">10.1038/ncb2210</pub-id> <pub-id pub-id-type="pmid">21423178</pub-id></citation></ref>
<ref id="B101"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vik</surname> <given-names>E. S.</given-names></name> <name><surname>Nawaz</surname> <given-names>M. S.</given-names></name> <name><surname>Strom Andersen</surname> <given-names>P.</given-names></name> <name><surname>Fladeby</surname> <given-names>C.</given-names></name> <name><surname>Bjoras</surname> <given-names>M.</given-names></name> <name><surname>Dalhus</surname> <given-names>B.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Endonuclease V cleaves at inosines in RNA.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>4</volume>:<issue>2271</issue>. <pub-id pub-id-type="doi">10.1038/ncomms3271</pub-id> <pub-id pub-id-type="pmid">23912683</pub-id></citation></ref>
<ref id="B102"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villarroya-Beltri</surname> <given-names>C.</given-names></name> <name><surname>Gutierrez-Vazquez</surname> <given-names>C.</given-names></name> <name><surname>Sanchez-Cabo</surname> <given-names>F.</given-names></name> <name><surname>Perez-Hernandez</surname> <given-names>D.</given-names></name> <name><surname>Vazquez</surname> <given-names>J.</given-names></name> <name><surname>Martin-Cofreces</surname> <given-names>N.</given-names></name><etal/></person-group> (<year>2013</year>). <article-title>Sumoylated hnRNPA2B1 controls the sorting of miRNAs into exosomes through binding to specific motifs.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>4</volume>:<issue>2980</issue>. <pub-id pub-id-type="doi">10.1038/ncomms3980</pub-id> <pub-id pub-id-type="pmid">24356509</pub-id></citation></ref>
<ref id="B103"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vojtech</surname> <given-names>L.</given-names></name> <name><surname>Woo</surname> <given-names>S.</given-names></name> <name><surname>Hughes</surname> <given-names>S.</given-names></name> <name><surname>Levy</surname> <given-names>C.</given-names></name> <name><surname>Ballweber</surname> <given-names>L.</given-names></name> <name><surname>Sauteraud</surname> <given-names>R. P.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Exosomes in human semen carry a distinctive repertoire of small non-coding RNAs with potential regulatory functions.</article-title> <source><italic>Nucleic Acids Res.</italic></source> <volume>42</volume> <fpage>7290</fpage>&#x2013;<lpage>7304</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gku347</pub-id> <pub-id pub-id-type="pmid">24838567</pub-id></citation></ref>
<ref id="B104"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>J.</given-names></name> <name><surname>Ma</surname> <given-names>G.</given-names></name> <name><surname>Li</surname> <given-names>M.</given-names></name> <name><surname>Han</surname> <given-names>X.</given-names></name> <name><surname>Xu</surname> <given-names>J.</given-names></name> <name><surname>Liang</surname> <given-names>M.</given-names></name><etal/></person-group> (<year>2020</year>). <article-title>Plasma tRNA fragments derived from 5&#x2032; ends as novel diagnostic biomarkers for early-stage Breast Cancer.</article-title> <source><italic>Mol. Ther. Nucleic Acids</italic></source> <volume>21</volume> <fpage>954</fpage>&#x2013;<lpage>964</lpage>. <pub-id pub-id-type="doi">10.1016/j.omtn.2020.07.026</pub-id> <pub-id pub-id-type="pmid">32814252</pub-id></citation></ref>
<ref id="B105"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>Z.</given-names></name> <name><surname>Xiang</surname> <given-names>L.</given-names></name> <name><surname>Shao</surname> <given-names>J.</given-names></name> <name><surname>Yuan</surname> <given-names>Z.</given-names></name></person-group> (<year>2006</year>). <article-title>The 3&#x2032; CCACCA sequence of tRNAAla(UGC) is the motif that is important in inducing Th1-like immune response, and this motif can be recognized by Toll-like receptor 3.</article-title> <source><italic>Clin. Vaccine Immunol.</italic></source> <volume>13</volume> <fpage>733</fpage>&#x2013;<lpage>739</lpage>. <pub-id pub-id-type="doi">10.1128/CVI.00019-16</pub-id></citation></ref>
<ref id="B106"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>Z. S.</given-names></name> <name><surname>Zhou</surname> <given-names>H. C.</given-names></name> <name><surname>Wei</surname> <given-names>C. Y.</given-names></name> <name><surname>Wang</surname> <given-names>Z. H.</given-names></name> <name><surname>Hao</surname> <given-names>X.</given-names></name> <name><surname>Zhang</surname> <given-names>L. H.</given-names></name><etal/></person-group> (<year>2021</year>). <article-title>Global survey of miRNAs and tRNA-derived small RNAs from the human parasitic protist <italic>Trichomonas vaginalis</italic>.</article-title> <source><italic>Parasit Vectors</italic></source> <volume>14</volume>:<issue>87</issue>. <pub-id pub-id-type="doi">10.1186/s13071-020-04570-4579</pub-id></citation></ref>
<ref id="B107"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Watanabe</surname> <given-names>A.</given-names></name> <name><surname>Tatematsu</surname> <given-names>M.</given-names></name> <name><surname>Saeki</surname> <given-names>K.</given-names></name> <name><surname>Shibata</surname> <given-names>S.</given-names></name> <name><surname>Shime</surname> <given-names>H.</given-names></name> <name><surname>Yoshimura</surname> <given-names>A.</given-names></name><etal/></person-group> (<year>2011</year>). <article-title>Raftlin is involved in the nucleocapture complex to induce poly(I:C)-mediated TLR3 activation.</article-title> <source><italic>J. Biol. Chem.</italic></source> <volume>286</volume> <fpage>10702</fpage>&#x2013;<lpage>10711</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M110.185793</pub-id> <pub-id pub-id-type="pmid">21266579</pub-id></citation></ref>
<ref id="B108"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wei</surname> <given-names>Z.</given-names></name> <name><surname>Batagov</surname> <given-names>A. O.</given-names></name> <name><surname>Carter</surname> <given-names>D. R.</given-names></name> <name><surname>Krichevsky</surname> <given-names>A. M.</given-names></name></person-group> (<year>2016</year>). <article-title>Fetal bovine serum RNA interferes with the cell culture derived extracellular RNA.</article-title> <source><italic>Sci. Rep.</italic></source> <volume>6</volume>:<issue>31175</issue>. <pub-id pub-id-type="doi">10.1038/srep31175</pub-id> <pub-id pub-id-type="pmid">27503761</pub-id></citation></ref>
<ref id="B109"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wei</surname> <given-names>Z.</given-names></name> <name><surname>Batagov</surname> <given-names>A. O.</given-names></name> <name><surname>Schinelli</surname> <given-names>S.</given-names></name> <name><surname>Wang</surname> <given-names>J.</given-names></name> <name><surname>Wang</surname> <given-names>Y.</given-names></name> <name><surname>El Fatimy</surname> <given-names>R.</given-names></name><etal/></person-group> (<year>2017</year>). <article-title>Coding and noncoding landscape of extracellular RNA released by human glioma stem cells.</article-title> <source><italic>Nat. Commun.</italic></source> <volume>8</volume>:<issue>1145</issue>. <pub-id pub-id-type="doi">10.1038/s41467-017-01196-x</pub-id> <pub-id pub-id-type="pmid">29074968</pub-id></citation></ref>
<ref id="B110"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wilusz</surname> <given-names>J. E.</given-names></name></person-group> (<year>2015</year>). <article-title>Controlling translation via modulation of tRNA levels.</article-title> <source><italic>Wiley Int. Rev. RNA</italic></source> <volume>6</volume> <fpage>453</fpage>&#x2013;<lpage>470</lpage>. <pub-id pub-id-type="doi">10.1002/wrna.1287</pub-id> <pub-id pub-id-type="pmid">25919480</pub-id></citation></ref>
<ref id="B111"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Woolnough</surname> <given-names>J. L.</given-names></name> <name><surname>Atwood</surname> <given-names>B. L.</given-names></name> <name><surname>Giles</surname> <given-names>K. E.</given-names></name></person-group> (<year>2015</year>). <article-title>Argonaute 2 binds directly to tRNA genes and promotes gene repression in cis.</article-title> <source><italic>Mol. Cell. Biol.</italic></source> <volume>35</volume> <fpage>2278</fpage>&#x2013;<lpage>2294</lpage>. <pub-id pub-id-type="doi">10.1128/MCB.00076-15</pub-id> <pub-id pub-id-type="pmid">25918241</pub-id></citation></ref>
<ref id="B112"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yamasaki</surname> <given-names>S.</given-names></name> <name><surname>Ivanov</surname> <given-names>P.</given-names></name> <name><surname>Hu</surname> <given-names>G. F.</given-names></name> <name><surname>Anderson</surname> <given-names>P.</given-names></name></person-group> (<year>2009</year>). <article-title>Angiogenin cleaves tRNA and promotes stress-induced translational repression.</article-title> <source><italic>J. Cell Biol.</italic></source> <volume>185</volume> <fpage>35</fpage>&#x2013;<lpage>42</lpage>. <pub-id pub-id-type="doi">10.1083/jcb.200811106</pub-id> <pub-id pub-id-type="pmid">19332886</pub-id></citation></ref>
<ref id="B113"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yuana</surname> <given-names>Y.</given-names></name> <name><surname>Sturk</surname> <given-names>A.</given-names></name> <name><surname>Nieuwland</surname> <given-names>R.</given-names></name></person-group> (<year>2013</year>). <article-title>Extracellular vesicles in physiological and pathological conditions.</article-title> <source><italic>Blood Rev.</italic></source> <volume>27</volume> <fpage>31</fpage>&#x2013;<lpage>39</lpage>. <pub-id pub-id-type="doi">10.1016/j.blre.2012.12.002</pub-id> <pub-id pub-id-type="pmid">23261067</pub-id></citation></ref>
<ref id="B114"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>X.</given-names></name> <name><surname>Gong</surname> <given-names>W.</given-names></name> <name><surname>Cao</surname> <given-names>S.</given-names></name> <name><surname>Yin</surname> <given-names>J.</given-names></name> <name><surname>Zhang</surname> <given-names>J.</given-names></name> <name><surname>Cao</surname> <given-names>J.</given-names></name><etal/></person-group> (<year>2020</year>). <article-title>Comprehensive analysis of Non-coding RNA Profiles of exosome-like vesicles from the protoscoleces and hydatid cyst fluid of <italic>Echinococcus granulosus</italic>.</article-title> <source><italic>Front. Cell Infect. Microbiol.</italic></source> <volume>10</volume>:<issue>316</issue>. <pub-id pub-id-type="doi">10.3389/fcimb.2020.00316</pub-id> <pub-id pub-id-type="pmid">32793506</pub-id></citation></ref>
<ref id="B115"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>Y.</given-names></name> <name><surname>Shi</surname> <given-names>J.</given-names></name> <name><surname>Zhang</surname> <given-names>H.</given-names></name> <name><surname>Cao</surname> <given-names>Z.</given-names></name> <name><surname>Gao</surname> <given-names>X.</given-names></name> <name><surname>Ren</surname> <given-names>W.</given-names></name><etal/></person-group> (<year>2014</year>). <article-title>Identification and characterization of an ancient class of small RNAs enriched in serum associating with active infection.</article-title> <source><italic>J. Mol. Cell Biol.</italic></source> <volume>6</volume> <fpage>172</fpage>&#x2013;<lpage>174</lpage>. <pub-id pub-id-type="doi">10.1093/jmcb/mjt052</pub-id> <pub-id pub-id-type="pmid">24380870</pub-id></citation></ref>
<ref id="B116"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhao</surname> <given-names>X.</given-names></name> <name><surname>Wu</surname> <given-names>D.</given-names></name> <name><surname>Ma</surname> <given-names>X.</given-names></name> <name><surname>Wang</surname> <given-names>J.</given-names></name> <name><surname>Hou</surname> <given-names>W.</given-names></name> <name><surname>Zhang</surname> <given-names>W.</given-names></name></person-group> (<year>2020</year>). <article-title>Exosomes as drug carriers for cancer therapy and challenges regarding exosome uptake.</article-title> <source><italic>Biomed. Pharmacother.</italic></source> <volume>128</volume>:<issue>110237</issue>. <pub-id pub-id-type="doi">10.1016/j.biopha.2020.110237</pub-id> <pub-id pub-id-type="pmid">32470747</pub-id></citation></ref>
<ref id="B117"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhou</surname> <given-names>Y.</given-names></name> <name><surname>Zhou</surname> <given-names>G.</given-names></name> <name><surname>Tian</surname> <given-names>C.</given-names></name> <name><surname>Jiang</surname> <given-names>W.</given-names></name> <name><surname>Jin</surname> <given-names>L.</given-names></name> <name><surname>Zhang</surname> <given-names>C.</given-names></name><etal/></person-group> (<year>2016</year>). <article-title>Exosome-mediated small RNA delivery for gene therapy.</article-title> <source><italic>Wiley Interdiscip. Rev. RNA</italic></source> <volume>7</volume> <fpage>758</fpage>&#x2013;<lpage>771</lpage>. <pub-id pub-id-type="doi">10.1002/wrna.1363</pub-id> <pub-id pub-id-type="pmid">27196002</pub-id></citation></ref>
<ref id="B118"><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zietzer</surname> <given-names>A.</given-names></name> <name><surname>Hosen</surname> <given-names>M. R.</given-names></name> <name><surname>Wang</surname> <given-names>H.</given-names></name> <name><surname>Goody</surname> <given-names>P. R.</given-names></name> <name><surname>Sylvester</surname> <given-names>M.</given-names></name> <name><surname>Latz</surname> <given-names>E.</given-names></name><etal/></person-group> (<year>2020</year>). <article-title>The RNA-binding protein hnRNPU regulates the sorting of microRNA-30c-5p into large extracellular vesicles.</article-title> <source><italic>J. Extracell. Vesicles</italic></source> <volume>9</volume>:<issue>1786967</issue>. <pub-id pub-id-type="doi">10.1080/20013078.2020.1786967</pub-id> <pub-id pub-id-type="pmid">32944175</pub-id></citation></ref>
</ref-list>
</back>
</article>
