Accurate and reliable results are fundamental to producing valid microbiological findings (Karadayi et al., 2017). A critical step in properly evaluating the efficacy of biocidal products is the neutralization of antimicrobial activity (Eissa, 2016), as the presence of inhibitory substances in culture media can suppress the growth of viable microorganisms, leading to misleading or inaccurate laboratory results and underestimated risk (Mehrgan et al., 2006). The reliability of microbiological analyses of liquid samples largely depends on ensuring that each sample truly reflects its condition at the time of collection. Therefore, during water sampling, any residual biocidal activity must be completely neutralized to prevent continued antimicrobial effects (Lai et al., 2021). The antimicrobial activity of agents can be neutralized through several approaches, including filtration, and chemical neutralization (Katerji et al., 2023). Filtration aims to remove antimicrobials from suspension but may be limited by adsorption of the agents to either the membrane filter or microbial cells, thereby reducing recovery. Lastly, residual antimicrobials can be inhibited by chemical neutralization, using a wide variety of neutralizers (Mehrgan et al., 2006). The chemical eq. liquid neutralization method is also the preferred approach for conducting antimicrobial effectiveness tests by the United States Pharmacopeia (USP) (Katerji et al., 2023). A validated protocol involves applying an antimicrobial agent on bacterial suspension and mixing it with a neutralizing agent with for an appropriate contact period (typically 5–10 min), before applying the mixture to the growth medium (Eissa, 2016). Standardized methods such as EN 1276, ASTM E1054, and USP guidelines recommend specific neutralizers tailored to different antimicrobial compounds. For common agents such as quaternary ammonium compounds, chlorine, hydrogen peroxide, aldehydes, and alcohols, these standards clearly specify neutralizer formulations containing lecithin, saponin, polysorbate 80, sodium thiosulfate, glycine, and magnesium ions (ASTM, 2002; The United States Pharmacopeial Convention, 2012; EN 1276, 2020). Additionally, EN 1276 (2020) notes that sodium chloride supplemented with tryptone may also serve as a neutralizing rinse solution in membrane filtration methods.

While neutralization strategies for conventional chemical antimicrobials are well established, emerging disinfection technologies pose new challenges that require tailored approaches. Among these, Cold Atmospheric Plasma (CAP) has gained attention as a promising alternative due to its strong antimicrobial potential and environmentally friendly nature (Zhao et al., 2020b; Lunder et al., 2025). Plasma is a partially or fully ionized gas composed of various reactive species, including reactive oxygen and nitrogen species (RONS), electrons, positive and negative ions, free radicals, gas atoms and molecules in different energy states, that are responsible for microbial inactivation (Liao et al., 2018). When CAP interacts with water, it triggers a cascade of chemical reactions, resulting in the formation of Plasma Activated Water (PAW) (Machala et al., 2019), consisting of numerous aqueous RONS (Zhou et al., 2020). Notably, these can be classified into short- and long-lasting species (Lunder et al., 2025). Short-lived species, such as hydroxyl radicals and hydrated electrons (Zhao et al., 2020a), exist only briefly—hydroxyl radicals, for instance, have a residence time of about 150 ps at the gas–water interface (Wick and Dang, 2007). In contrast, long-lived species such as ozone and hydrogen peroxide can persist for several to dozens of minutes and can diffuse into the liquid phase (Bruggeman et al., 2016; Wong et al., 2023), where they may remain stable for weeks or even months (Shen et al., 2016; Tsoukou et al., 2020). These long-lived RONS can also undergo secondary post-treatment reactions, generating additional, more stable species. A detailed discussion of RONS chemistry is beyond the scope of this manuscript, and readers are referred to our previous work for a comprehensive overview (Lunder et al., 2025). Consequently, when evaluating or standardizing antimicrobial assays involving PAW, it is essential to neutralize these long-lived oxidants rather than short-lived RONS, as the latter decay spontaneously before they can interfere with downstream analyses.

CAP treatment of contaminated water affects the microbial cells via cell wall permeabilization, penetration of reactive species and chemical actions inside the cell (Zimmermann et al., 2012). CAP exposure induces oxidative stress in microbial cells, damaging DNA, proteins, and lipids while compromising membrane integrity, which facilitates further RONS infiltration and ultimately cell death (Xu et al., 2020). Furthermore, the long-lasting antibacterial effects of PAW itself are primarily attributed to stable, long-lived reactive species (Traylor et al., 2011; Shen et al., 2016; Zhang et al., 2024), which have been shown to persist for at least 30 days while maintaining antimicrobial activity (Shen et al., 2016). Consequently, to prevent continued microbial inactivation after sampling, it is necessary to neutralize CAP-derived long-lived RONS before microbiological analysis. This requirement becomes clearer when compared with classical disinfection approaches. For example, chlorine-based disinfectants generate a pronounced residual effect, as free chlorine or chloramines remain active in the treated medium and continue to inactivate microorganisms long after the initial exposure. Therefore, neutralizers such as sodium thiosulfate must be added prior to microbiological enumeration to quench any remaining disinfectant and prevent overestimation of antimicrobial efficacy (Dotson et al., 2012; Wang et al., 2024). In contrast, UV-based disinfection does not introduce any chemical agents into the medium and produces no residual antimicrobial activity (Dotson et al., 2012). Once UV irradiation ceases, the inactivation process stops immediately, eliminating the need for subsequent neutralization steps. This distinction highlights why neutralization is essential for PAW and other treatments that generate long-lived reactive species, but unnecessary for methods that lack residual effects. It should be noted, however, that such neutralization primarily targets long-lived species and may not fully eliminate the effects of freshly produced PAW, in which short-lived reactive species can still contribute to antimicrobial activity.

In most reviewed studies where PAW was tested (Table 1), solely dilution without neutralization was used (Ikawa et al., 2010; Shen et al., 2016; Royintarat et al., 2019; Baek et al., 2020). In some studies, phosphate-buffered saline (PBS) (Cai et al., 2023; Boopathy et al., 2024), peptone saline diluent (Han et al., 2016), or peptone water (Hadinoto et al., 2021) are used as the dilution medium. Only a few studies have emphasized the neutralization step after PAW treatment and have employed and validated chemical neutralizers (Hummert et al., 2023), for example, used neutralization solution containing 3-L-α-phosphatidylcholine (0.3%), Tween 80 (3%), sodium thiosulphate (0.5%), L-histidine (0.1%), and saponin (3%) for neutralization of PAW, modifying the DIN EN 1040 standard for testing chemical disinfectants and antiseptics. On the other hand, Xu et al. (2020) removed RONS by centrifuging the sample and resuspending bacterial cells in PBS. Meanwhile, some of the studies skipped the neutralization step altogether and applied PAW directly onto the incubating solid medium (Machala et al., 2019; Schmidt et al., 2019; Maybin et al., 2023). Most studies use non-selective media such as Tryptic Soy Agar (TSA), Nutrient Agar (NA), or Luria Bertani Agar (LBA). However, in some cases, selective agars are used because PAW-producing devices cannot guarantee sterile conditions.

Unlike fixed chemical agents, RONS are dynamic species whose reactivity depends on CAP device, volume of water and water environment (Lunder et al., 2025). Consequently, the suitability of traditional neutralizers and their capacity to effectively quench the oxidative potential of PAW, must be thoroughly evaluated. To date, no systematic studies have evaluated common neutralizers suitable for PAW testing. Despite the growing interest in CAP for water disinfection, there is currently no standardized protocol for neutralizing its residual antimicrobial effects. We have found that majority of PAW investigations have not incorporated neutralization procedures in either liquid or solid media. The absence of such steps allows the residual antibacterial activity of PAW to persist during microbiological assays, thereby continuing to exert effects on bacterial cells and potentially leading to an overestimation of its antimicrobial efficacy. Consequently, the establishment of standardized and validated protocols for the accurate and reproducible evaluation of PAW is urgently required. This lack of methodological consistency may lead to inaccurate estimations of CAP efficacy and hinder its comparison across studies. Establishing an effective neutralization protocol for PAW could support its future integration into more standardized antimicrobial testing frameworks, based on the approach used for chemical disinfectants. An appropriate neutralizer must meet three key criteria: it must effectively quench residual biocidal activity, exhibit no toxicity toward microorganisms, and not generate toxic by-products when combined with the antimicrobial agent (Sutton et al., 2002). Based on these requirements, commonly accepted neutralizers, PBS, NaCl with tryptone, polysorbate 80, lecithin, sodium thiosulphate were selected for evaluation. In addition, a combination of these neutralizers was assessed (Mix), as the use of mixed neutralizing agents is common in antimicrobial standards to achieve optimal neutralization performance. Their mechanisms of actions and main neutralization targets are presented in Table 2, but they have not been tested on PAW yet. Therefore, this study aims to (1) assess the prolonged antimicrobial activity of PAW using S. aureus and E. coli strains, (2) evaluate the neutralizing capacity of various chemical liquid and solid neutralizers on PAW, and (3) determine optimal culturing conditions for accurate PAW testing.

CAP has emerged as a promising novel water disinfection method (Oehmigen et al., 2010; Van Gils et al., 2013). The antimicrobial activity of CAP has been widely documented against various microorganisms, including E. coli (Machala et al., 2019; Nguyen et al., 2020; Hadinoto et al., 2021; Wang and Salvi, 2021), S. aureus (Schmidt et al., 2019; Shen et al., 2016; Han et al., 2016) and Salmonella spp. (Huang et al., 2018; Abdo et al., 2023; Boopathy et al., 2024). Our findings are consistent with these reports, confirming that CAP exhibits strong antimicrobial properties against both E. coli and S. aureus in water medium, achieving log reductions of 1.09 and 3.27, respectively, after 3 min of treatment. All comparisons were highly significant (p < 0.000001), confirming that the antimicrobial effect of PAW was not transient and was maintained within 24 h storage. Overall, treatment of S. aureus demonstrated higher log reductions than E. coli. Literature remains divided on this matter, as some studies report S. aureus as less susceptible to plasma activated PBS than E. coli (Zhao et al., 2020a; Togay et al., 2023). Conversely, other investigations reported no significant difference (Maisch et al., 2012) or even greater reductions of S. aureus (Klämpfl et al., 2012; Sedghizadeh et al., 2012) or Gram-positive bacteria in general (Rashmei et al., 2016). These inconsistencies likely reflect variations in plasma source, exposure time, and PAW composition. Although Rashmei et al. (2016) reported a much higher reduction of E. coli (8 log), their study used a 15 min CAP treatment of only 10 mL of water. Similarly, Kim et al. (2013) achieved a 5 log reduction of E. coli after 5 min when treating a water volume 10 times smaller than ours. Liew et al. (2023) also observed a high, 80% reduction of S. aureus after 3 min of CAP treatment of 5 mL of water. These comparisons confirm that the volume of treated water plays an important part in CAP disinfection efficiency and that studies are hard to be directly compared to each other. Notably, our study also used a flow-through system, and the others studied batch treatment. Another key determinant in microbial inactivation is also treatment duration that effects the bacterial reduction efficacy (Lunder et al., 2025). For example, F. Liu et al. (2010) achieved a total S. aureus reduction after 20 min of treatment, while Royintarat et al. (2019) achieved similar reductions for S. aureus in only 6.5 min of treatment. Furthermore, the design of the plasma device significantly affects the disinfection outcomes. In a study by Triantaphyllidou and Aggelopoulos (2025), a DBD system operating above water showed no significant reduction in E. coli even after 5 min of treatment. These differences were also confirmed by Tian et al. (2015), who showed better disinfection efficacy when CAP was produced directly under water. However, unlike most studies, our experimental setup was a flow-through system, with water serving as the second electrode in the DBD reactor. These observations highlight the importance of treatment parameters in antimicrobial testing. Beyond treatment conditions, understanding the post-treatment behavior of PAW is equally essential, as its antimicrobial activity can persist and evolve during storage.

Further experiments showed that storing the treated samples at 4°C for 24 h resulted in complete inactivation of both bacterial strains. This outcome reflects delayed loss of viability following PAW exposure rather than evidence of antimicrobial activity persisting throughout the entire storage period. Since bacteria were present during PAW production, the observed reduction to non-detectable levels after 24 h represents cumulative inactivation arising from immediate plasma effects and subsequent oxidative damage. Plasma-derived reactive species are known to induce oxidative stress in microbial cells, leading to damage of DNA, proteins, and lipids, which may result in immediate cell death or delayed loss of cultivability due to irreversible cellular injury (Xu et al., 2020). To specifically evaluate whether PAW retains antimicrobial activity after storage, an additional experiment was performed in which fresh bacterial suspensions were added to PAW after 24 h of storage (Supplementary Appendix 2). In this case, only modest reductions of 0.41 log CFU/mL for E. coli and 0.32 log CFU/mL for S. aureus were observed, indicating that antimicrobial activity decreases substantially over time. These findings demonstrate that while long-lived reactive species may persist in PAW after 24 h, their antimicrobial efficacy is markedly reduced compared to freshly generated PAW. Rashmei et al. (2016) similarly reported complete E. coli inactivation in CAP-treated PBS after 24 h of storage, observing an 8 log reduction between day 0 and day 1. In our study, a comparable effect was observed, with a total reduction in E. coli corresponding to a 5.51 log decrease. This finding reinforces the fact that PAW is a dynamic antimicrobial system rather than a static disinfectant, where chemical reactivity continues to contribute to microbial inactivation even after CAP treatment has ended. Han et al. (2016), also demonstrated a higher reduction after 24 h of storage following direct CAP treatment for both E. coli and S. aureus. Interestingly, they observed a noticeable decrease in bacterial CFUs even after only 1 h of CAP treatment of bacterial suspensions. This extended inactivation is primarily attributed to long-lived RONS generated in PAW. In terms of antimicrobial efficacy, PAW can be considered to exhibit residual activity. Chlorine behaves similarly: its strong residual effect requires neutralization, typically with sodium thiosulfate, which is routinely added to water-sample collection bottles (OECD and World Health Organization, 2003). This analogy further demonstrates that PAW must be neutralized upon sample collection to obtain accurate results. Without neutralization, RONS continue to inactivate bacteria during the incubation period, leading to overestimated antimicrobial efficacy.

To better understand their contribution to residual antimicrobial effect, we quantified H₂O₂, O₃, NO₂ and NO₃ immediately after CAP treatment of water (day 0) and after 24 h storage (day 1) in samples with and without bacteria, respectively. These two experimental conditions are essential, as we directly evaluated how the presence of bacteria alters RONS composition immediately after treatment and after 1 day of storage. All of the measured RONS’ concentrations decreased within 24 h of storage, suggesting that they continued reacting with other reactive species or directly with bacteria (Dolezalova and Lukes, 2015). Importantly, PAW generated in the presence of bacteria consistently showed greater RONS depletion, indicating active bacterial consumption or degradation of both short- and long-lived species. Therefore, PAW effectiveness is decreased with the consumption of RONS, as they react with organic matter. This confirms that PAW composition is shaped not only by CAP chemistry but also by biological interactions occurring during and after treatment. Notably, even after 1 day of storage, RONS in PAW without bacteria remained at levels capable of depleting bacterial viability, further underscoring the need for effective neutralization.

Among all quantified RONS, ozone showed the most substantial decline during storage in both sterile and bacteria-containing PAW. Ozone decreased sharply after 1 day storage, with greater depletion in samples with bacteria (69%), confirming additional post-treatment reactions. When ozone reacts with bacteria (Van Gils et al., 2013), it degrades their cell walls and damages nucleic acids and carbon–nitrogen bonds of proteins (Baghal Asghari et al., 2021). Accordingly, ozone concentrations were significantly lower in samples containing bacteria on both days, reflecting its consumption during antimicrobial action. In sterile PAW, ozone decreased by 56% within 24 h. This decrease likely results from its reaction with water, producing additional hydroxyl radicals (Perinban et al., 2022) or from its interaction with HO2 radicals to generate molecular oxygen (Rathore et al., 2021; Perinban et al., 2022). In studies by Perinban et al. (2022) and Han et al. (2016), the decrease was even greater, with ozone concentrations dropping below the detection limit after 24 h of storage time. The former study examined only PAW incubation, while the latter included analysis with bacterial presence. Similarly, Cai et al. (2023) reported an ozone reduction of over 50% after 24 h storage of PAW without bacteria, reaching levels comparable to those in our study, despite treating less than half the sample volume. Together, these comparisons highlight that ozone instability is consistently observed, but its magnitude varies with experimental parameters.

H₂O₂ is another key oxidant, which plays a crucial role in sustaining PAW’s antimicrobial action (Wong et al., 2023). It can decompose to produce hydroxyl radicals (Brisset and Pawlat, 2016), transform into hydroperoxyl radicals (Zhao et al., 2020b) or react directly with bacterial membranes, disrupting peptidoglycan layers, compromising the first layer of cell’s protection (Yusupov et al., 2013). In the present study, H₂O₂ concentrations were significantly lower (p < 0.000001) in samples containing bacteria, reflecting its consumption through these reactions. The H₂O₂ concentration also decreased by 29% after 1 day of storage in sterile PAW, whereas samples containing bacteria showed a far greater 66% reduction, indicating substantial consumption through bacterial reactions during post-treatment storage. A similar decrease of approximately 20% of H₂O₂ in PAW without bacteria was reported by Shen et al. (2016), although their experiments involved a smaller treated volume of water (15 mL). A decrease after 1 day of storage was also noted by Cai et al. (2023), reporting more than a one-fold reduction in H₂O₂ concentration when using a plasma jet device treating water without bacteria. In contrast, Vlad and Anghel (2017) did not observe a significant decline in H₂O₂ levels after 1 day of storage, which could be attributed to their longer treatment duration (50 min), potentially enhancing PAW stability. Importantly, none of these studies incubated PAW with bacteria, further emphasizing the novelty of our findings.

In contrast, nitrite and nitrate concentrations changed only minimally during storage, suggesting that their contribution to long term antibacterial activity was limited. However, nitrite levels were significantly lower in samples containing bacteria (p < 0.0001), whereas nitrate concentrations showed no significant difference between bacteria-containing (p = 0.23) and sterile (p = 0.06) groups. Nitrite’s stability in sterile PAW, paired with its reduction in bacteria-containing samples only on day 0, suggests that its primary reactivity occurs during the initial CAP exposure rather than during storage. While its levels could also be replenished through the reactions of NO with O2 (Anderson et al., 2016) or OH radicals (Tachibana and Nakamura, 2019), such reactions appear to be confined to the immediate post-treatment period. Nitrate remained stable in both groups, with only a minor decrease in bacteria-containing PAW within 24 h. A decrease in nitrite concentration was also observed by Zhang et al. (2024) for 5 min CAP treatment of water without bacteria. Nitrate, however, only decreased when PAW was generated using a discharge power of 100 W or lower, emphasizing the influence of CAP generation parameters. Similarly, Shen et al. (2016) reported a reduction of approximately 7 mg/L in nitrite concentration after 1 day of storage, comparable to the 4 mg/L decrease observed in our study in PAW without bacteria. Consistent with our results, they found no significant changes in nitrate concentration. In a study by Vlad and Anghel (2017) the nitrate concentration remained stable after 1 day of storage in 35 mL water samples treated for 50 min with no bacteria present. Wang and Salvi (2021) also reported no decrease in nitrate over 24 h storage and a more than one-fold decrease in nitrite. However, their experiments were performed using PAW without bacteria and with distilled water at over twice smaller volumes, which may explain the observed differences in nitrite. Although RNS present in PAW are known to play a key role in bacterial inactivation (Graves, 2012; Zhou et al., 2020) our results suggest that ROS were primarily responsible for the observed antibacterial effects within the first 24 h. It is likely, however, that RNS act synergistically with ROS over longer storage times, contributing to bacterial nitrosative stress and maintaining PAW’s prolonged activity (Borkar et al., 2023).

Given this persistent RONS stability and consequent post-treatment reactivity, we hypothesized that neutralization should be performed immediately after exposure to CAP, following standard antimicrobial testing protocols (ASTM, 2002; EN 1276, 2020). Without neutralization, residual active compounds can continue to inhibit microbial recovery, leading to artificially high reductions and inaccurate results (Mehrgan et al., 2006). Despite its importance, the neutralization step has received little attention in published PAW research (Table 1), leading to inconsistent methodologies and potentially overestimated antimicrobial outcomes across studies. After reviewing the literature, we found that some studies (Machala et al., 2019; Schmidt et al., 2019; Maybin et al., 2023) skip the neutralization step altogether, while others (Wang and Salvi, 2021; Cai et al., 2023; Boopathy et al., 2024) only dilute the sample in different liquid mediums. The term “neutralization” is predominantly used in the field of plasma medicine, where it refers to the process of neutralizing CAP-generated ROS on various tissues. In this context, N-acetylcysteine is frequently employed as the neutralizing agent (Liu et al., 2024; Sun et al., 2024). However, this approach is not applicable to the present study, as N-acetylcysteine selectively neutralizes ROS but does not affect RNS (Ercan et al., 2016). Based on our review of their mechanisms of action (Table 2), the neutralizers most commonly specified in antimicrobial testing standards (EN 1276, 2020), PBS, NaCl with tryptone, polysorbate 80, lecithin, sodium thiosulphate, and a combined mixture (Mix), were selected for evaluation.

Chemical neutralization effectively neutralized PAW for both bacterial strains in all tested cases, as indicated by higher viability of bacteria in comparison to a sample where no neutralization was performed. The consistent high significance across all neutralizers (p < 0.0001) confirms that chemical components of PAW are essential for its antimicrobial effect. With the increased viability, the non-toxic nature of neutralizers and the quenching of bactericidal activity was also confirmed. Among the neutralizers, the “Mix” formulation yielded the best performance for both E. coli and S. aureus. This improvement likely arises from synergistic effects among its components. PBS and tryptone help maintain pH stability (Takahashl et al., 1997; Chen, 2011) while polysorbate 80, lecithin, and sodium thiosulphate act as surfactants and antioxidants that interact with diverse antimicrobial residues (Katerji et al., 2023). These compounds inhibit free radical formation and neutralize RONS (Das et al., 2022), collectively enhancing bacterial recovery. Similar conclusions were drawn by Katerji et al. (2023), who demonstrated effective neutralization of common antimicrobials such as parabens, ibuprofen, and sodium benzoate using neutralizers composed of polysorbate 80, lecithin, and sodium thiosulphate. Likewise, Espigares et al. (2003) achieved neutralization of peracetic acid with a formulation containing polysorbate 80, sodium thiosulphate, sodium bisulfate, and lecithin. However, the same formulation was ineffective against glutaraldehyde and o-phthalaldehyde, highlighting the importance of validating neutralization efficiency for each antimicrobial individually. In the context of PAW, this validation is particularly relevant due to its heterogeneous composition, which varies with plasma type, discharge power, and feed gas. While most of the cited studies examined combinations of neutralizing agents for chemical antimicrobials, our study investigated the effects of individual neutralizers, as such data have not been previously reported for PAW. Although differences among the neutralizers were not significant, the “Mix” formulation consistently supported higher microbial regrowth, reinforcing its suitability as the optimal choice for PAW neutralization. Notably, S. aureus exhibited a more pronounced difference between neutralized and non-neutralized samples compared to E. coli. This observation aligns with known differences in bacterial cell wall structures. Gram-negative bacteria like E. coli are more susceptible to extracellular oxidative damage due to their thinner peptidoglycan layer, while Gram-positive bacteria such as S. aureus possess a thicker peptidoglycan barrier that protects the cytoplasmic membrane (Lunder et al., 2025). Consequently, neutralizing agents are more effective in mitigating extracellular RONS damage, which is critical for E. coli, whereas in S. aureus, where intracellular oxidative damage predominates (Lim et al., 2025), the neutralizing effect appears to be less pronounced. For final validation of the “Mix” neutralizer, tests were performed in accordance with the EN 1276 standard (EN 1276, 2020). These validations confirmed the reliability of the laboratory procedure, the effectiveness of neutralization, and the non-toxic nature of the neutralizers, as detailed in Supplementary Appendix 3.

While chemical neutralization minimizes residual antimicrobial effects, the subsequent incubating environment on solid media can further influence bacterial enumeration. To further evaluate the neutralization capacity of solid media with different selectivity and neutralizing capacities were tested. Since some PAW-generation systems are not completely sterile, selective media were tested alongside non-selective and neutralizing media to ensure accurate recovery of bacteria. Previous research demonstrated that culture medium composition significantly influences bacterial recovery following stress (Noor et al., 2013). Four agar types were examined for each strain: TSA, DEA, EA, and NEA for E. coli; and TSA, DEA, MSA, and NMSA for S. aureus. TSA is a widely used non-selective agar. Its enzymatic digests of soy and casein support robust growth of both E. coli and S. aureus (HiMedia Laboratories, 2024b). To test the possibility of neutralization on solid media, non-selective DEA was also evaluated. Its ingredients include sodium thiosulfate and lecithin, which inactivate residual disinfectants and oxidative agents, aiding recovery of stressed or injured cells (Dey and Engley, 1983). Moreover, for selective growth in non-sterile environments, we tested EA and MSA, as they are known to inhibit the growth of unwanted organisms (Bonnet et al., 2020). MSA combines high salt concentration (7.5% NaCl) to inhibit most non-halotolerant bacteria with mannitol and phenol red, allowing selective growth of S. aureus and visual differentiation based on mannitol fermentation (Shields and Tsang, 2006). On the other hand, EA contains bile salts, basic fuchsin, and lactose, which inhibit Gram-positive organisms while differentiating lactose-fermenting coliforms like E. coli (HiMedia Laboratories, 2024a). However, it was shown that selective media can also suppress stressed or injured cells, leading to underestimation of viable counts (Bange et al., 2016). To address this, we also tested combinations of DEA with the respective selective agars (EA and MSA), following the approach of Bange et al. (2016), trying to achieve both neutralizing and selective capabilities of solid medium. In our experiments, selective agars generally yielded lower viable counts than non-selective ones, likely due to inhibition of PAW-injured cells, while neutralizing variants (NEA, NMSA) improved recovery but still lagged behind non-selective media (DEA, TSA). Similarly to our study, non-selective agar provided the most growth, followed by the selective agar in a study by Bange et al. (2016), who treated S. aureus with carvacrol. Furthermore, in a study by Grabow and Du Preez (1979) EA yielded the highest count of E. coli in comparison to some other coliform selective agars in river water samples. Additionally, Bange et al. (2016) found that injured S. aureus cells were effectively recovered by the selective agar (MSA) combination with non-selective media (TSA), and at a significantly higher concentration than recovery on selective media (MSA) alone. That’s contrary to our study, where NMSA had a higher difference to the controls than MSA. This could be explained by using different antimicrobial substances, as we used PAW and they used carvacrol.

Finally, to develop an optimized methodology for PAW testing, the most effective liquid neutralizer (Mix) was combined with each solid medium. The one-way ANOVA showed a statistically significant effect of agar type on PAW antimicrobial activity for both E. coli (F = 7.184, p = 0.001) and S. aureus (F = 8.291, p = 0.0007). In both bacterial strains, non-selective agars (TSA and DEA) again yielded the highest colony counts, while selective media (MSA and EA) produced lower recoveries. Selective formulations tend to restrict recovery of injured cells (Bange et al., 2016). Therefore, for routine PAW antimicrobial testing, we recommend combining chemical neutralization using the Mix formulation with non-selective or mildly neutralizing media such as NMSA for S. aureus and NEA for E. coli to achieve both effective neutralization and reliable microbial enumeration.

This study demonstrates that CAP represents an effective and promising approach for microbial inactivation in water disinfection applications. PAW generated in our flow-through DBD system exhibited strong antimicrobial activity against both E. coli and S. aureus, with the latter showing higher susceptibility under the tested conditions. The persistence of antimicrobial activity during storage, resulted in complete bacterial inactivation within 24 h at 4°C, highlighting the dynamic and evolving chemical reactivity of PAW, primarily governed by long-lived reactive oxygen and nitrogen species. Among these, hydrogen peroxide and ozone were identified as key contributors to post-treatment antimicrobial effects, whereas nitrite and nitrate exhibited relatively stable concentrations, suggesting a secondary or synergistic role in prolonged bacterial inhibition. Notably, PAW produced in the presence of bacteria exhibited consistently higher RONS losses, indicating that bacteria promote the consumption or breakdown of long-lived species.

Furthermore, the results emphasize the necessity of immediate neutralization following CAP exposure to ensure accurate antimicrobial evaluation. As recommended by different antimicrobial testing standards, the neutralizer should be applied immediately after antimicrobial (in our case PAW) treatment. Since different PAW devices produce varying chemical profiles, a single neutralizer may not suffice; instead, neutralization should involve multiple components tailored to quench the relevant reactive species. Importantly, the neutralizer should be validated to ensure it effectively quenches residual antimicrobial activity, is non-toxic to microorganisms, and does not generate harmful by-products when combined with the antimicrobial agent. The success of the validation process depends on the microorganisms used, PAW composition, and the liquid medium. In our case, the chemical-dilution method effectively quenched residual PAW activity, with the combined “Mix” neutralizer, consisting of PBS, NaCl with tryptone, polysorbate 80, lecithin, and sodium thiosulphate, proving most efficient. This mixture met the essential criteria for a suitable neutralizer. The validation process (described and presented in Supplementary Appendix 3) confirmed that the neutralizer was non-toxic to bacteria and possessed RONS quenching capacity. These properties are critical for ensuring accurate and reproducible antimicrobial testing. In evaluating incubating conditions, non-selective media, such as TSA and DEA, provided superior bacterial regrowth compared to selective agars, which tended to suppress injured cells. Therefore, for standardized PAW testing, we recommend integrating chemical neutralization with the Mix formulation and employing non-selective or mildly selective solid media (NEA for E. coli and NMSA for S. aureus).

These findings have important implications for the standardization of PAW antimicrobial testing, as the persistence of long-lived RONS highlights the need for immediate neutralization in experimental protocols to avoid overestimation of disinfection efficiency. In applied settings, the optimized neutralization protocol may improve the reliability of microbial quality assessments in CAP-treated water systems or industrial sterilization processes. Future studies using molecular or metabolic assays could further validate the neutralization process and its impact on bacterial viability.