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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2025.1654634</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Retraction</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Retraction: Among live and dead bacteria, the optimization of sample collection and processing remains essential in recovering gut microbiota components</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<collab>Frontiers Editorial Office</collab>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/228891/overview"/>
</contrib>
</contrib-group> <author-notes>
<fn fn-type="edited-by"><p>Approved by: Frontiers Editorial Office, Frontiers Media SA, Switzerland</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Frontiers Editorial Office <email>research.integrity&#x00040;frontiersin.org</email></corresp>
</author-notes>
<pub-date pub-type="epub">
<day>07</day>
<month>07</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>16</volume>
<elocation-id>1654634</elocation-id>
<history>
<date date-type="received">
<day>26</day>
<month>06</month>
<year>2025</year>
</date>
<date date-type="accepted">
<day>27</day>
<month>06</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2025 Frontiers Editorial Office.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Frontiers Editorial Office</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<related-article id="RA1" related-article-type="retracted-article" journal-id="Front. Microbiol." journal-id-type="nlm-ta" vol="10" page="01606" xlink:href="10.3389/fmicb.2019.01606" ext-link-type="doi">A Retraction of the Original Research Article <article-title>Among live and dead bacteria, the optimization of sample collection and processing remains essential in recovering gut microbiota components</article-title> by Bellali, S., Lagier, J.-C., Raoult, D., and Bou Khalil, J. (2019). <italic>Front. Microbiol</italic>. 10:1606. doi: <object-id>10.3389/fmicb.2019.01606</object-id></related-article>
<counts>
<fig-count count="0"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="45"/>
<page-count count="3"/>
<word-count count="2113"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Microbial Symbioses</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<p>The journal retracts the July 10 2019 article cited above.</p>
<p>Following publication, it was brought to our attention that the ethical approval for this study referred to the same ethics approval number 2016-011 that had been used across a series of unrelated published studies (Afouda et al., <xref ref-type="bibr" rid="B1">2020</xref>, <xref ref-type="bibr" rid="B2">2019</xref>; Amrane et al., <xref ref-type="bibr" rid="B3">2018</xref>, <xref ref-type="bibr" rid="B4">2019</xref>; Anani et al., <xref ref-type="bibr" rid="B5">2019</xref>; Andrieu et al., <xref ref-type="bibr" rid="B6">2018</xref>; Bellali et al., <xref ref-type="bibr" rid="B7">2020</xref>, <xref ref-type="bibr" rid="B8">2021</xref>; Belkacemi et al., <xref ref-type="bibr" rid="B9">2020</xref>, <xref ref-type="bibr" rid="B10">2018</xref>; Benabdelkader et al., <xref ref-type="bibr" rid="B11">2019</xref>; Diakite et al., <xref ref-type="bibr" rid="B12">2019</xref>, <xref ref-type="bibr" rid="B13">2020</xref>; Dione et al., <xref ref-type="bibr" rid="B14">2018</xref>; Dubourg et al., <xref ref-type="bibr" rid="B15">2020</xref>; Fall et al., <xref ref-type="bibr" rid="B16">2019</xref>, <xref ref-type="bibr" rid="B17">2018</xref>; Francis et al., <xref ref-type="bibr" rid="B18">2019</xref>; Grine et al., <xref ref-type="bibr" rid="B19">2019</xref>, <xref ref-type="bibr" rid="B20">2018</xref>; Guindo et al., <xref ref-type="bibr" rid="B21">2020</xref>; Hamad et al., <xref ref-type="bibr" rid="B22">2018</xref>, <xref ref-type="bibr" rid="B23">2017</xref>; Hassani et al., <xref ref-type="bibr" rid="B24">2020</xref>; Hocquart et al., <xref ref-type="bibr" rid="B25">2019</xref>; Kuete Yimagou et al., <xref ref-type="bibr" rid="B26">2019</xref>; Kuete et al., <xref ref-type="bibr" rid="B27">2019a</xref>,<xref ref-type="bibr" rid="B28">b</xref>; Maaloum et al., <xref ref-type="bibr" rid="B29">2022b</xref>,<xref ref-type="bibr" rid="B30">a</xref>; Mbogning Fonkou et al., <xref ref-type="bibr" rid="B31">2019</xref>; Mekhalif et al., <xref ref-type="bibr" rid="B32">2019</xref>; Naud et al., <xref ref-type="bibr" rid="B33">2021</xref>; Ndongo et al., <xref ref-type="bibr" rid="B34">2022</xref>; Ngom et al., <xref ref-type="bibr" rid="B35">2020</xref>; Senghor et al., <xref ref-type="bibr" rid="B37">2018</xref>, <xref ref-type="bibr" rid="B36">2019</xref>, <xref ref-type="bibr" rid="B38">2017b</xref>,<xref ref-type="bibr" rid="B39">a</xref>; Takakura et al., <xref ref-type="bibr" rid="B40">2020</xref>, <xref ref-type="bibr" rid="B41">2019</xref>; Traore et al., <xref ref-type="bibr" rid="B42">2019</xref>; Yimagou et al., <xref ref-type="bibr" rid="B43">2019b</xref>, <xref ref-type="bibr" rid="B44">2020</xref>, <xref ref-type="bibr" rid="B45">2019a</xref>). It remains unclear whether appropriate ethics provisions, in line with Frontiers Policies and Publication Ethics policies were adhered to.</p>
<p>The authors and a representative of Aix-Marseille Universit&#x000E9; Ethics Committee were not able to address all our concerns. As such, this article is retracted.</p>
<p>This retraction was approved by the Chief Executive Editor of Frontiers.</p>
<p>The authors do not agree with this retraction.</p>
</body>
<back>
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