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<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2024.1348437</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Evaluating the diagnostic accuracy of TpN17 and TmpA recombinant proteins in syphilis detection: a phase II study</article-title>
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<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Silva</surname>
<given-names>&#x00C2;ngelo Ant&#x00F4;nio Oliveira</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>Lima</surname>
<given-names>Ayla Ara&#x00FA;jo</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>Vasconcelos</surname>
<given-names>Larissa Carvalho Medrado</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>Almeida</surname>
<given-names>Ros&#x00E2;ngela Andrade</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>Freitas</surname>
<given-names>Nat&#x00E1;lia Erdens Maron</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Oliva</surname>
<given-names>Talita Andrade</given-names>
</name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>de Carvalho Ribeiro da Silva</surname>
<given-names>Miralba Freire</given-names>
</name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>Marchini</surname>
<given-names>Fabricio Klerynton</given-names>
</name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
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<name>
<surname>Zanchin</surname>
<given-names>Nilson Ivo Tonin</given-names>
</name>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
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<contrib contrib-type="author">
<name>
<surname>de Siqueira</surname>
<given-names>Isadora Cristina</given-names>
</name>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
<xref ref-type="aff" rid="aff8"><sup>8</sup></xref>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Santos</surname>
<given-names>Fred Luciano Neves</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
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<aff id="aff1"><sup>1</sup><institution>Advanced Public Health Laboratory, Gon&#x00E7;alo Moniz Institute (IGM) Foundation Oswaldo Cruz (Fiocruz-BA)</institution>, <addr-line>Salvador</addr-line>, <country>Brazil</country></aff>
<aff id="aff2"><sup>2</sup><institution>Salvador University (UNIFACS)</institution>, <addr-line>Salvador</addr-line>, <country>Brazil</country></aff>
<aff id="aff3"><sup>3</sup><institution>State Center for Diagnosis, Assistance, and Research (CEDAP)</institution>, <addr-line>Salvador</addr-line>, <country>Brazil</country></aff>
<aff id="aff4"><sup>4</sup><institution>Molecular Biology Institute of Paran&#x00E1;</institution>, <addr-line>Curitiba</addr-line>, <country>Brazil</country></aff>
<aff id="aff5"><sup>5</sup><institution>Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute (ICC) Oswaldo Cruz Foundation (Fiocruz-PR)</institution>, <addr-line>Curitiba</addr-line>, <country>Brazil</country></aff>
<aff id="aff6"><sup>6</sup><institution>Structural Biology and Protein Engineering Laboratory, Carlos Chagas Institute (ICC) Oswaldo Cruz Foundation (Fiocruz-PR)</institution>, <addr-line>Curitiba</addr-line>, <country>Brazil</country></aff>
<aff id="aff7"><sup>7</sup><institution>Integrated Translational Program in Chagas Disease from Fiocruz (Fio-Chagas), Oswaldo Cruz Foundation (Fiocruz-RJ)</institution>, <addr-line>Rio de Janeiro</addr-line>, <country>Brazil</country></aff>
<aff id="aff8"><sup>8</sup><institution>Laboratory of Investigation in Global Health and Neglected Diseases, Gon&#x00E7;alo Moniz Institute (IGM) Oswaldo Cruz Foundation (FIOCRUZ-BA)</institution>, <addr-line>Salvador</addr-line>, <country>Brazil</country></aff>
<author-notes>
<fn fn-type="edited-by" id="fn0002"><p>Edited by: Christopher J. Pappas, Manhattanville College, United States</p></fn>
<fn fn-type="edited-by" id="fn0003"><p>Reviewed by: Melissa Jo Caimano, University of Connecticut Health Center, United States</p><p>David &#x0160;majs, Masaryk University, Czechia</p></fn>
<corresp id="c001">&#x002A;Correspondence: Fred Luciano Neves Santos, <email>fred.santos@fiocruz.br</email></corresp>
</author-notes>
<pub-date pub-type="epub">
<day>27</day>
<month>02</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>15</volume>
<elocation-id>1348437</elocation-id>
<history>
<date date-type="received">
<day>02</day>
<month>12</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>06</day>
<month>02</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2024 Silva, Lima, Vasconcelos, Almeida, Freitas, Oliva, de Carvalho Ribeiro da Silva, Marchini, Zanchin, de Siqueira and Santos.</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Silva, Lima, Vasconcelos, Almeida, Freitas, Oliva, de Carvalho Ribeiro da Silva, Marchini, Zanchin, de Siqueira and Santos</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Syphilis is a sexually transmitted infection (STI) caused by the spiral bacterium <italic>Treponema pallidum</italic>. Diagnosis is based on epidemiology, clinical and serology, but serodiagnosis is challenging because distinct clinical forms of the infection may influence serological performance. Several recombinant <italic>Treponema pallidum</italic>-proteins have already been tested for syphilis diagnosis and they are critical to achieve high accuracy in serological testing. A total of 647 samples were included in the study: 180 <italic>T. pallidum</italic>-positive samples, 191 <italic>T. pallidum</italic>-negative samples and 276 sera from individuals infected with unrelated diseases. The diagnostic potential was validated by analysis of ROC curves. For the indirect ELISA, TpN17 (100%) and TmpA (99%) showed excellent AUC values. Sensitivity values were 97.2% for TpN17 and 90.6% for TmpA, while specificity was 100% for both molecules. According to the clinical phase, TmpA ranged from 84% to 97%, with the highest value for secondary syphilis. TpN17 was 100% sensitive for the primary and secondary stages and 93.2% for recent latent syphilis. All clinical phases achieved 100% specificity. Accuracy values showed that TmpA (&#x003E; 95%) and TpN17 (&#x003E; 98%) presented high diagnostic accuracy for all clinical stages of syphilis. Cross-reactivity was only observed in one sample positive for Chagas disease (1.5%), when TpN17 was evaluated. On the other hand, TmpA showed reactivity for two samples positive for Chagas disease (3.1%), one sample positive for HBV (1.25%), two samples positive for HIV (9.5%) and one sample positive for HTLV (1.6%). The TmpA antigen&#x2019;s performance was evaluated in multiple studies for syphilis diagnosis, corroborating our findings. However, TpN17 sensitivity values have ranged in other studies. According to clinical stages of the infection, our findings obtained close performance values.</p>
</abstract>
<kwd-group>
<kwd>syphilis</kwd>
<kwd>recombinant proteins</kwd>
<kwd>immunodiagnosis</kwd>
<kwd>TpN17 protein</kwd>
<kwd>TmpA protein</kwd>
<kwd>ELISA</kwd>
<kwd>treponemal test</kwd>
</kwd-group>
<counts>
<fig-count count="4"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="55"/>
<page-count count="11"/>
<word-count count="7479"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Infectious Agents and Disease</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="sec1">
<label>1</label>
<title>Introduction</title>
<p>Syphilis, a sexually transmitted infection (STI), is caused by the spirochete bacterium <italic>Treponema pallidum</italic>, subspecies pallidum (order Spirochaetales). It manifests in multiple clinical stages with distinct characteristics (<xref ref-type="bibr" rid="ref21">Larsen et al., 1995</xref>). Primary syphilis presents as a painless, typically solitary, clean-based, indurated ulcer (chancre) at the site of bacterial replication (<xref ref-type="bibr" rid="ref19">LaFond and Lukehart, 2006</xref>; <xref ref-type="bibr" rid="ref15">Hook, 2017</xref>; <xref ref-type="bibr" rid="ref37">Peeling et al., 2017</xref>; <xref ref-type="bibr" rid="ref32">O&#x2019;Byrne and Macpherson, 2019</xref>). About two to 12&#x2009;weeks after sexual contact, it progresses to secondary syphilis, characterized by diffuse skin rashes and mucosal lesions (<xref ref-type="bibr" rid="ref15">Hook, 2017</xref>; <xref ref-type="bibr" rid="ref37">Peeling et al., 2017</xref>; <xref ref-type="bibr" rid="ref32">O&#x2019;Byrne and Macpherson, 2019</xref>). If left untreated, syphilis may advance through asymptomatic stages (recent and late latent) and lead to symptomatic forms such as tertiary syphilis, which is characterized by slowly progressive systemic symptoms, including necrotic granulomatous lesions, neurosyphilis, and cardiovascular syphilis (<xref ref-type="bibr" rid="ref15">Hook, 2017</xref>; <xref ref-type="bibr" rid="ref2">Arando Lasagabaster and Otero Guerra, 2019</xref>). Congenital syphilis occurs when infected pregnant women transmit the infection during childbirth or breastfeeding (<xref ref-type="bibr" rid="ref46">Singh and Romanowski, 1999</xref>; <xref ref-type="bibr" rid="ref12">Giacani and Lukehart, 2014</xref>).</p>
<p>In recent decades, there has been an alarming increase in reported syphilis cases. Approximately 6.3 million cases are reported annually among individuals aged 15 and 49&#x2009;years worldwide. The global incidence rate was 1.7 cases per 1,000 women and 1.6 per 1,000 men in 2016 and prevalence ranges from 0.1 to 1.6% across different regions from 2012 to 2016 (<xref ref-type="bibr" rid="ref40">Rowley et al., 2019</xref>). Only Brazil, there were 167,523 cases of acquired syphilis and 74,095 cases of syphilis in pregnant women reported in 2021. Additionally, 27.1 cases per 1,000 live births were detected, along with 27,019 cases of congenital syphilis, yielding an incidence rate of 9.9 cases per 1,000 live births (<xref ref-type="bibr" rid="ref29">Minist&#x00E9;rio da Sa&#x00FA;de, 2022</xref>).</p>
<p>Laboratory diagnosis of syphilis involves serological tests, including treponemal (TTs) and non-treponemal (NTTs). These tests are employed in either a traditional approach (NTTs for screening and TTs for confirmation) or a reverse algorithm (TTs for screening, NTTs for confirmation of positive samples, and secondary TT testing in case of discordant results) (<xref ref-type="bibr" rid="ref7">Clyne and Jerrard, 2000</xref>). NTTs such as VDRL (venereal disease research laboratory) and RPR (rapid plasma reagin) are used to qualitatively and quantitatively detect anticardiolipin antibodies produced between the 1st and 2nd weeks after the appearance of the indurated ulcer (chancre), for both screening and monitoring therapeutic progress (<xref ref-type="bibr" rid="ref21">Larsen et al., 1995</xref>; <xref ref-type="bibr" rid="ref19">LaFond and Lukehart, 2006</xref>). TTs are necessary for the qualitative detection of IgG or IgM anti-<italic>T. pallidum</italic> antibodies, offering automated methodologies, rapid screening, and high-precision quantification for multiple samples with high precision (<xref ref-type="bibr" rid="ref7">Clyne and Jerrard, 2000</xref>; <xref ref-type="bibr" rid="ref11">Forrestel et al., 2020</xref>), with superior diagnostic performance compared to NTTs (<xref ref-type="bibr" rid="ref34">Park et al., 2019</xref>).</p>
<p>The performance of ELISA in syphilis diagnosis varies depending on the antigens used for detecting anti-<italic>T. pallidum</italic> antibodies (<xref ref-type="bibr" rid="ref22">Liu et al., 2019</xref>). Antigenic matrices can incorporate lysates of <italic>T. pallidum</italic> or recombinant antigens, either isolated or in combination (<xref ref-type="bibr" rid="ref21">Larsen et al., 1995</xref>). In a phase I study, TpN15, TpN17, TpN47, and TmpA recombinant proteins exhibited superior diagnostic performance (<xref ref-type="bibr" rid="ref45">Silva et al., 2020</xref>). TpN17 and TmpA showed the most promising results and advanced to a phase II study. Several other studies have explored these proteins in the development of serological tests, seeking precision, rapidity, and cost-effectiveness (<xref ref-type="bibr" rid="ref55">Young et al., 1998</xref>; <xref ref-type="bibr" rid="ref43">Sato et al., 1999</xref>; <xref ref-type="bibr" rid="ref53">Xu et al., 2016</xref>). However, limited research involving these proteins has been conducted in Brazil, despite the high incidence of syphilis. Therefore, our study aims to optimize indirect ELISA for assessing the diagnostic potential of TpN17 and TmpA proteins using samples from serologically positive individuals in Brazil.</p>
</sec>
<sec sec-type="materials|methods" id="sec2">
<label>2</label>
<title>Materials and methods</title>
<sec id="sec3">
<label>2.1</label>
<title>Recombinant proteins synthesis</title>
<p>We followed the method previously described (<xref ref-type="bibr" rid="ref45">Silva et al., 2020</xref>) for recombinant protein synthesis. In brief, we acquired synthetic genes of the bacterium <italic>T. pallidum</italic> subspecies pallidum Nichols strain from a commercial supplier (GenScript, Piscataway-NJ, United States). These synthetic genes, purchased in pUC57, were subcloned in-house into the pET28a expression vector, and expression was carried out in <italic>Escherichia coli</italic> strain BL21-Star (DE3). Bacterial cells were initially incubated for 16&#x2009;h at 37&#x00B0;C in Luria-Bertani broth containing kanamycin (50&#x2009;&#x03BC;g/mL). The culture was then diluted at 1:20 in fresh medium and incubated at 37&#x00B0;C until an optical density ranging from 0.6 to 0.8 was reached, measured at 600&#x2009;nm (OD600). Expression was induced by adding IPTG (isopropyl &#x03B2;-D-1-thiogalactopyranoside) to a final concentration of 500&#x2009;&#x03BC;M and incubating for 4&#x2009;h at 37&#x00B0;C. Bacterial cell disruption was achieved using either a microfluidizer processor (Microfluidics Model M-110&#x2009;L, Hyland Scientific, Stanwood-WA, United States) or chemical methods. The resulting recombinant proteins were purified through affinity and ion exchange chromatography. Proteins were quantified using a fluorometric assay (Qubit12.0, Invitrogen Technologies, Carlsbad-CA, United States), and purity was confirmed through SDS-PAGE stained with CBB-G250 (<xref ref-type="bibr" rid="ref18">Laemmli, 1970</xref>).</p>
</sec>
<sec id="sec4">
<label>2.2</label>
<title>Sampling</title>
<p>The sample size calculation, conducted with a 95% confidence interval, expected sensitivity and specificity of 99%, and an absolute error of 1.5%, using the OpenEpi program<xref ref-type="fn" rid="fn0001"><sup>1</sup></xref> (<xref ref-type="bibr" rid="ref9">Dean et al., 2013</xref>), determined that we needed 169 <italic>T. pallidum</italic>-positive samples (TpP) and 169 <italic>T. pallidum</italic>-negative samples (TpN) to conduct this study. Seven hundred two samples were deemed eligible. Following sera characterization, we excluded 65 samples, leaving 647 samples for analysis.</p>
<p>Panel 1: consisted of 180 <italic>T. pallidum</italic>-positive samples obtained from CEDAP, Bahia State Health Department, between April 26, 2021, and November 12, 2021. These samples were obtained through serological tests (rapid immunochromatographic test and VDRL) and clinical examinations for syphilis conducted by healthcare professionals at the reference center. Of these, 30 were from primary syphilis, 77 from secondary syphilis, and 73 from early latent syphilis. We obtained 191 <italic>T. pallidum</italic>-negative samples from the Foundation of Hematology and Hemotherapy of the State of Bahia (HEMOBA) from December 2017 to April 2019, stored in our biorepository.</p>
<p>Panel 2: contained 276 samples from individuals with unrelated diseases, previously diagnosed using parasitological or serological methods. These samples were obtained from HEMOBA and the Foundation of Hematology and Hemotherapy of the State of Pernambuco (HEMOPE) and included chronic Chagas disease (<italic>n</italic>&#x2009;=&#x2009;65), hepatitis B virus (<italic>n</italic>&#x2009;=&#x2009;80), hepatitis C virus (<italic>n</italic>&#x2009;=&#x2009;49), HIV-1/2 (<italic>n</italic>&#x2009;=&#x2009;21), and HTLV-1/2 (<italic>n</italic>&#x2009;=&#x2009;61). Sample selection for cross-reactivity assessment was based on confirmed disease positivity and concurrent negativity for syphilis in the chemiluminescence assay conducted at the blood bank.</p>
<p>All serum samples from panel 1 and 2 underwent serological retesting for <italic>T. pallidum</italic> antibodies using one non-treponemal (NTT): VDRL test kit (Wiener Lab, Rosario, Argentina), and two treponemal tests (TTs): anti-<italic>Treponema pallidum</italic> IIFT (IgG) test (Euroimmun Medizinische Labordiagnostika AG, L&#x00FC;beck, Germany), and recombinant ELISA v.4.0 test (IgG) (Wiener lab., Rosario, Argentina). All testing was performed in accordance with the manufacturer&#x2019;s instructions.</p>
<p>A sample was considered positive when it tested positively in two treponemal tests (ELISA and FTA-ABS) and one non-treponemal test (VDRL). Conversely, it was deemed negative if it did not show positivity in two treponemal tests (ELISA and FTA-ABS). In cases of equivocal or positive results, samples were subjected to a non-treponemal test (VDRL). Samples with volume less than 50&#x2009;&#x03BC;L and those with uncertain or undefined serological evaluation for syphilis were not included in this study. Each sample was assigned a unique identifier code to ensure a blinded analysis.</p>
</sec>
<sec id="sec5">
<label>2.3</label>
<title>Indirect ELISA</title>
<p>Standardization followed the checkerboard titration as previously described (<xref ref-type="bibr" rid="ref45">Silva et al., 2020</xref>) and was optimized for this study. In summary, 100&#x2009;ng/well of TpN17 and 200&#x2009;ng/well of TmpA, in coating buffer (0.05&#x2009;M carbonate&#x2013;bicarbonate, pH 9.6), were added to transparent flat-bottom polystyrene microplates (Microtest Plate 96 Well, F&#x2014;Sarstedt, Germany). These were incubated at room temperature (RT) for 15&#x2009;min. Subsequently, the microplates were blocked and stabilized with 100&#x2009;&#x03BC;L/well of WellChampion<sup>&#x2122;</sup> (Ken-En-Tec Diagnostics A/S, Taastrup, Denmark) synthetic blocking buffer for 15&#x2009;min, following the manufacturer&#x2019;s instructions. Afterward, the microplates were emptied, inverted, and placed in an oven at 37&#x00B0;C for 90&#x2009;min for drying (MARCONI<sup>&#x00AE;</sup> MA032, S&#x00E3;o Paulo-SP, Brazil). They were then washed once in 0.75% Tween-20 plus PBS buffer (PBS-T). Serum samples were loaded at 1:25 in PBS-T, adding 100&#x2009;&#x03BC;L/well. After incubation for 30&#x2009;min at 37&#x00B0;C, the microplates were washed in PBS-T to remove any unbound antibodies. HRP-conjugated secondary antibody (SIGMA SAB3701283; Sigma-Aldrich, San Luis, Missouri, EUA; lot RI39338), diluted at 1:10.000 (TmpA and TpN17) in PBS-T, was added to each well, followed by incubation for 30&#x2009;min at 37&#x00B0;C and subsequent washing with PBS-T. For the detection of the immunocomplexes, 100&#x2009;&#x03BC;L of TMB Plus solution (tetramethyl-benzidine; Ken-En-Tec Diagnostics A/S, Taastrup, Denmark) was added to each well. After 15&#x2009;min of incubation at RT in the dark, the reaction was halted with 50&#x2009;&#x03BC;L of 0.3&#x2009;M H2SO4, and absorbance was measured at 450&#x2009;nm in a microplate spectrophotometer (SPECTRAmax 340PC1, California, United States).</p>
</sec>
<sec id="sec6">
<label>2.4</label>
<title>Statistical analysis</title>
<p>Statistical analysis was conducted using scatter computer graphic software (GraphPad Prism version 9, San Diego-CA, United States). The variables were analyzed using descriptive measures, including arithmetic and geometric means and standard deviation (SD). The geometric means were calculated with a 95% confidence interval (CI). Data normality was assessed using the Shapiro&#x2013;Wilk test. The Wilcoxon&#x2013;Mann&#x2013;Whitney or Kruskal&#x2013;Wallis test was employed when the null hypothesis was rejected. When the normality was confirmed, the Student&#x2019;s <italic>t</italic>-test was used. All conclusions were drawn at a significance level of <italic>p</italic>&#x2009;&#x003C;&#x2009;0.05. The cut-off (CO) values for TpN17 were determined based on the area under the ROC curve (AUC) (TpN17), while for TmpA, they were established using the mean of the negative values plus 2 standard deviations (X&#x0304; NEG&#x2009;+&#x2009;2SD). Results were normalized by calculating the reactivity index (RI), denoting the ratio between the OD of the samples and the CO. Samples with RI&#x2009;&#x2265;&#x2009;1.0 were considered positive, RI&#x2009;&#x003C;&#x2009;1.0 negative, and RI&#x2009;=&#x2009;&#x00B1;10% of 1.0 classified as inconclusive (gray zone). To assess global accuracy for each antigen, we calculated areas under the ROC curve (AUC), interpreted as outstanding (1.0), elevated (0.82&#x2013;0.99), moderate (0.62&#x2013;0.81), or low (0.51&#x2013;0.61) (<xref ref-type="bibr" rid="ref50">Swets, 1988</xref>). We determined and compared ELISA performance parameters regarding sensitivity (Sen), specificity (Spe), accuracy (Acc), positive (LR+) and negative (LR-) likelihood ratio, and diagnostic odds ratio (DOR). We established the agreement strength between the standard tests and ELISA through Cohen&#x2019;s Kappa (<italic>&#x03BA;</italic>), interpreted as follows: 1.0&#x2009;&#x2264;&#x2009;<italic>&#x03BA;</italic>&#x2009;&#x2265;&#x2009;0.81 (almost perfect agreement), 0.80&#x2009;&#x2264;&#x2009;<italic>&#x03BA;</italic>&#x2009;&#x2265;&#x2009;0.61 (substantial agreement), 0.60&#x2009;&#x2264;&#x2009;<italic>&#x03BA;</italic>&#x2009;&#x2265;&#x2009;0.41 (moderate agreement), 0.40&#x2009;&#x2264;&#x2009;<italic>&#x03BA;</italic>&#x2009;&#x2265;&#x2009;0.21 (fair agreement), 0.20&#x2009;&#x2264;&#x2009;<italic>&#x03BA;</italic>&#x2009;&#x2265;&#x2009;0 (slight agreement), or <italic>k</italic>&#x2009;=&#x2009;0 (poor agreement) (<xref ref-type="bibr" rid="ref20">Landis and Koch, 1977</xref>). A checklist is provided according to the Standards for the Reporting of Diagnostic accuracy studies (STARD) guidelines.</p>
</sec>
</sec>
<sec sec-type="results" id="sec7">
<label>3</label>
<title>Results</title>
<sec id="sec8">
<label>3.1</label>
<title>Sera characterization</title>
<p>In this study, we employed a total of 712 serum samples (<xref ref-type="fig" rid="fig1">Figure 1</xref>). Initially, all samples underwent re-assessment using non-treponemal (VDRL) or treponemal (ELISA and FTA-ABS) tests. Samples returning discordant results or having insufficient volume were excluded (<italic>n</italic>&#x2009;=&#x2009;65; 9.1%). Following characterization, 180 positive samples were included, and seven were excluded due to discordant results (seven reagent samples for the ELISA, two non-reagent samples for the VDRL and seven reagent samples for the IIFT). Among negative samples, 191 were confirmed as negatives, with only one sample testing positive for IIFT. Regarding positive samples for unrelated diseases, 276 yielded negative result, while 31 showed discordant results (ELISA: eight reagent samples but non-reactive in IIFT; IIFT: 22 reagent samples but non-reactive in ELISA; VDR: one non-reactive sample but reagent in ELISA and IIFT).</p>
<fig position="float" id="fig1">
<label>Figure 1</label>
<caption>
<p>Sera characterization from <italic>Treponema pallidum</italic>-positive and negative samples tested with VDRL, ELISA, and IIFT. NR, non-reagent; R, reagent; VDRL, Venereal Disease Research Laboratory; ELISA, enzyme-linked immunosorbent assay; IIFT, indirect immunofluorescence&#x2014;IgG.</p>
</caption>
<graphic xlink:href="fmicb-15-1348437-g001.tif"/>
</fig>
</sec>
<sec id="sec9">
<label>3.2</label>
<title>ELISA performance</title>
<p>Both TmpA and TpN17 exhibited exceptional discrimination between positive and negative samples for syphilis, with AUC values of 99.2% for TmpA and 99.9% for TpN17. The TmpA and TpN17 <italic>T. pallidum</italic>-recombinant proteins achieved sensitivities of 90.6 and 97.2%, respectively. TpN17 identified five (2.8%) false-negative samples, while TmpA identified 17 (9.4%) false negatives, affecting the diagnostic sensitivity. The maximum specificity value was obtained for both proteins, with 100% for TmpA and TpN1. Accuracy values were 95.4% for TmpA and 98.7% for TpN17 (<xref ref-type="fig" rid="fig2">Figure 2</xref> and <xref ref-type="supplementary-material" rid="SM1">Supplementary Table S1</xref>).</p>
<fig position="float" id="fig2">
<label>Figure 2</label>
<caption>
<p>The reactivity index and diagnostic performance parameters of the TmpA and TpN17 for <italic>Treponema pallidum</italic>-positive and negative serum samples. The cut-off is set at the reactivity index value&#x2009;=&#x2009;1.0 and the shaded area represents the gray zone (RI&#x2009;=&#x2009;1.0&#x2009;&#x00B1;&#x2009;0.10). Horizontal lines and numbers represent the geometric means (&#x00B1;95% CI) for each result group. AUC, area under curve; Sen, sensitivity; Spe, specificity; Acc, accuracy; LR+, positive likelihood ratio; LR&#x2212;, negative likelihood ratio; DOR, diagnostic odds ratio; Neg, negative; Pos, positive; &#x0138; index, Cohen&#x2019;s Kappa index.</p>
</caption>
<graphic xlink:href="fmicb-15-1348437-g002.tif"/>
</fig>
<p>According to the positive likelihood ratio (LR+), both TpN17 and TmpA exhibited a significant increase (LR&#x2009;&#x003E;&#x2009;10) in the probability of a positive result for a person with syphilis compared to a negative person, with values of 1,857.92 and 1,730.52, respectively. The negative likelihood ratio (LR-) showed a significant decrease (LR&#x2009;&#x003C;&#x2009;0.1), with values of 0.03 (TpN17) and 0.09 (TmpA), indicating low probability of a negative result for a person with syphilis compared to a negative person. DOR values demonstrated the high diagnostic performance of botht TpN17 and TmpA, with values of 66,850 and 18,313.53 times the chance the test being positive for a person with syphilis compared to a negative person. Kappa values indicated almost perfect agreement (TmpA and TpN17) with the reference tests (<xref ref-type="table" rid="tab1">Table 1</xref>).</p>
<table-wrap position="float" id="tab1">
<label>Table 1</label>
<caption>
<p>Kappa values for TpN17 and TmpA compared to the gold standard.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top" rowspan="2">Result</th>
<th align="center" valign="top" colspan="2">Reverse algorithm</th>
<th align="center" valign="top" rowspan="2"><italic>&#x03BA;</italic> (95% CI)</th>
</tr>
<tr>
<th align="center" valign="top">Positive</th>
<th align="center" valign="top">Negative</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">TpN17</td>
<td/>
<td/>
<td align="char" valign="middle" char="(" rowspan="4">0.97 (0.97&#x2013;1.00)</td>
</tr>
<tr>
<td align="left" valign="top">Positive</td>
<td align="center" valign="middle">177</td>
<td align="center" valign="middle">0</td>
</tr>
<tr>
<td align="left" valign="top">Negative</td>
<td align="center" valign="middle">3</td>
<td align="center" valign="middle">191</td>
</tr>
<tr>
<td align="left" valign="top">Total</td>
<td align="center" valign="middle">180</td>
<td align="center" valign="middle">191</td>
</tr>
<tr>
<td align="left" valign="top">TmpA</td>
<td/>
<td/>
<td align="char" valign="middle" char="(" rowspan="4">0.91 (0.88&#x2013;0.96)</td>
</tr>
<tr>
<td align="left" valign="top">Positive</td>
<td align="center" valign="middle">165</td>
<td align="center" valign="middle">0</td>
</tr>
<tr>
<td align="left" valign="top">Negative</td>
<td align="center" valign="middle">15</td>
<td align="center" valign="middle">191</td>
</tr>
<tr>
<td align="left" valign="top">Total</td>
<td align="center" valign="middle">180</td>
<td align="center" valign="middle">191</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>&#x03BA;</italic>, Cohen&#x2019;s kappa; CI, confidence interval.</p>
</table-wrap-foot>
</table-wrap>
<p>Regarding the inconclusive zone (RI&#x2009;=&#x2009;1.0&#x2009;&#x00B1;&#x2009;10%), few positive samples yielded inconclusive results: three (1.7%) inconclusive results for TpN17 testing and seven (3.9%) for TmpA (<xref ref-type="fig" rid="fig3">Figure 3</xref>). No negative sample fell within the inconclusive space when tested using TmpA. However, one negative and two positive samples presented inconclusive results when assayed with TpN17. Concerning the <italic>T. pallidum</italic>-positive samples, TmpA exhibited the highest RI value (2.1&#x2009;&#x00B1;&#x2009;0.6), followed by TpN17 (3.2&#x2009;&#x00B1;&#x2009;0.55). For <italic>T. pallidum</italic>-negative samples, the RI value was lower for TpN17 (0.07&#x2009;&#x00B1;&#x2009;0.02), followed by TmpA (0.1&#x2009;&#x00B1;&#x2009;0.04).</p>
<fig position="float" id="fig3">
<label>Figure 3</label>
<caption>
<p>The reactivity index and diagnostic performance parameters of the TmpA and TpN17, stratified by clinical stage, for <italic>Treponema pallidum</italic>-positive and negative serum samples. The cut-off is set at the reactivity index value&#x2009;=&#x2009;1.0 and the shaded area represents the gray zone (RI&#x2009;=&#x2009;1.0&#x2009;&#x00B1;&#x2009;0.10). Horizontal lines and numbers represent the geometric means (&#x00B1;95% CI) for each result group. AUC, area under curve; Sen, sensitivity; Spe, specificity; Acc, accuracy; RI, reactivity index.</p>
</caption>
<graphic xlink:href="fmicb-15-1348437-g003.tif"/>
</fig>
<p>In addition to the individual performance of each molecule, we analyzed serial and parallel diagnostic performance using two indirect IBMP-ELISAs (<xref ref-type="table" rid="tab2">Table 2</xref>).</p>
<table-wrap position="float" id="tab2">
<label>Table 2</label>
<caption>
<p>Analysis of the diagnostic performance of TpN17 and TmpA antigens in the phase II study, considering serial, and parallel analyses.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top" rowspan="2">Performance parameters</th>
<th align="center" valign="top" colspan="2">Serial</th>
<th align="center" valign="top" colspan="2">Parallel</th>
</tr>
<tr>
<th align="center" valign="top">Values</th>
<th align="center" valign="top">95% CI</th>
<th align="center" valign="top">Values</th>
<th align="center" valign="top">95% CI</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle">Sensitivity (%)</td>
<td align="char" valign="top" char=".">91.1</td>
<td align="char" valign="top" char="&#x2013;">86.0&#x2013;94.5</td>
<td align="char" valign="top" char=".">97.2</td>
<td align="char" valign="top" char="&#x2013;">93.7&#x2013;98.8</td>
</tr>
<tr>
<td align="left" valign="middle">Specificity (%)</td>
<td align="char" valign="top" char=".">99.5</td>
<td align="char" valign="top" char="&#x2013;">97.1&#x2013;99.9</td>
<td align="char" valign="top" char=".">100</td>
<td align="char" valign="top" char="&#x2013;">98&#x2013;100</td>
</tr>
<tr>
<td align="left" valign="middle">Accuracy (%)</td>
<td align="char" valign="top" char=".">95.4</td>
<td align="char" valign="top" char="&#x2013;">92.8&#x2013;97.1</td>
<td align="char" valign="top" char=".">98.7</td>
<td align="char" valign="top" char="&#x2013;">96.9&#x2013;99.4</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>95% CI, confidence interval to 95%.</p>
</table-wrap-foot>
</table-wrap>
<p>In the serial analysis, sensitivity was of 91.1%, specificity was 99.5%, and accuracy was 95.4%. In parallel tests, sensitivity was 97.2%, higher than in serial analysis, with no false-positive results when negative samples were tested in parallel, resulting in 100% specificity. In parallel scheme, regardless of the set of antigens used, accuracy values exceeded the 95.4% obtained in serial analysis, reaching approximately 99%.</p>
<p>When evaluating the performance of the two proteins according to the clinical stage, TpN17 exhibited elevated AUC (&#x003E; 98%) values for primary, secondary, and early latent syphilis. TmpA achieved an outstanding AUC of 100% for primary/secondary syphilis and elevated values (99.8%) for the early latent syphilis (<xref ref-type="fig" rid="fig3">Figure 3</xref>).</p>
<p>Despite variations in sensitivity, TmpA ranged from 83.6 to 97.4%, with the highest value observed for the secondary stage. TpN17 demonstrated 100% sensitivity for primary and secondary stages and 93.2% for early latent syphilis. All clinical stages achieved a specificity of 100%. Accuracy values revealed that TmpA was highly accurate in diagnosing all clinical stages of syphilis, ranging from 95.5 to 98.6%, while TpN17 exhibited elevated accuracy in diagnostics (&#x003E;98.1%) for all clinical stages. Cohen&#x2019;s Kappa (<italic>&#x03BA;</italic>) analysis showed almost perfect agreement for both TmpA and TpN17. In <italic>T. pallidum</italic>-positive samples, TmpA exhibited the highest RI values: 2.86&#x2009;&#x00B1;&#x2009;1.85 (primary syphilis), 3.18&#x2009;&#x00B1;&#x2009;0.87 (secondary syphilis), and 2.01&#x2009;&#x00B1;&#x2009;0.73 (early latent syphilis), followed by TpN17: 3.04&#x2009;&#x00B1;&#x2009;1.26 (primary syphilis), 3.66&#x2009;&#x00B1;&#x2009;0.68 (secondary syphilis), and 2.84&#x2009;&#x00B1;&#x2009;0.77 (early latent). Both proteins demonstrated a high diagnostic capacity across all clinical stages.</p>
</sec>
<sec id="sec10">
<label>3.3</label>
<title>Assessment of cross-reactivity</title>
<p>We employed Panel 2, consisting of 314 serum positive samples for unrelated diseases (<xref ref-type="fig" rid="fig1">Figure 1</xref>), to assess the cross-reactivity of antibodies against various infectious parasitic and viral diseases. As shown in <xref ref-type="fig" rid="fig4">Figure 4</xref> (<xref ref-type="supplementary-material" rid="SM1">Supplementary Table S2</xref>), only one cross-reaction was observed (Chagas disease positive sample&#x2014;1.54%) when serum samples were tested with TpN17. The incidence of cross-reactivity with TmpA antigen was also negligible, with two cases for Chagas disease (3.07%), one for HBV (1.25%), two for HIV (9.52%), and one for HTLV (1.64%) positive samples resulting in false-positive outcomes.</p>
<fig position="float" id="fig4">
<label>Figure 4</label>
<caption>
<p>Analysis of the cross-reactivity of the <italic>Treponema pallidum</italic>-recombinant proteins with sera from various infectious parasitic and viral diseases. The cut-off value is reactivity index&#x2009;=&#x2009;1.0 and the shaded area represents the grey zone (RI&#x2009;=&#x2009;1.0&#x2009;&#x00B1;&#x2009;0.10). CHA, chronic Chagas disease; HBV, hepatitis B; HCV, hepatitis C; HIV, human immunodeficiency virus; HTLV, human T cell lymphotropic virus; RI, reactivity index.</p>
</caption>
<graphic xlink:href="fmicb-15-1348437-g004.tif"/>
</fig>
<p>Considering the gray zone (RI values of 1.0&#x2009;&#x00B1;&#x2009;0.10), no sample presented inconclusive results for TpN17, while relatively few samples were considered inconclusive for TmpA: two positive samples for HIV (9.52%), and two for the HTLV (3.3%). Regarding <italic>T. pallidum</italic>-positive samples with other infectious parasitic and viral diseases, TmpA exhibited the highest RI value for HIV (0.30&#x2009;&#x00B1;&#x2009;0.28) and the lowest RI value for HBV (0.10&#x2009;&#x00B1;&#x2009;0.05), followed by TpN17 with the highest and lowest RI values for HIV (0.10&#x2009;&#x00B1;&#x2009;0.102) and HBV (0.03&#x2009;&#x00B1;&#x2009;0.01), respectively.</p>
</sec>
</sec>
<sec sec-type="discussion" id="sec11">
<label>4</label>
<title>Discussion</title>
<p>In this study, we evaluated the diagnostic performance of two recombinant proteins, TpN17 and TmpA, for the detection of specific anti-<italic>T. pallidum</italic> antibodies in the serum of syphilis-positive individuals using the ELISA diagnostic platform. Previous proteomic studies have identified several <italic>T. pallidum</italic> proteins with immunoreactivity and diagnostic biomarker potential (<xref ref-type="bibr" rid="ref4">Brinkman et al., 2006</xref>; <xref ref-type="bibr" rid="ref28">McGill et al., 2010</xref>; <xref ref-type="bibr" rid="ref17">Kubanov et al., 2017</xref>). <xref ref-type="bibr" rid="ref28">McGill et al. (2010)</xref> investigated the immunological response of treponemal proteins in both rabbit sera and sera from <italic>T. pallidum</italic>-positive individuals, identifying 29 reactive proteins, including 42-kDa (TmpA), 47-kDa (TpN47), 17-kDa (TpN17), and 15-kDa (TpN15). These proteins are encoded by genes tp0171 (TpN15), tp0435 (TpN17), tp0574 (TpN47), and tp0768 (TmpA), and they are known for their immunogenic and diagnostic relevance (<xref ref-type="bibr" rid="ref17">Kubanov et al., 2017</xref>). Previous studies, conducted by our group, have also assessed the diagnostic performance of TpN17 and TmpA in phase I study (<xref ref-type="bibr" rid="ref45">Silva et al., 2020</xref>).</p>
<p>Our results demonstrated that both TpN17 and TmpA achieved high diagnostic accuracy, with area under the curve (AUC) values exceeding 99% and accuracy values exceeding 95%. Additionally, the positive and negative likelihood ratios (LR+ and LR&#x2212;) indicated significant results, further confirming the diagnostic potential of these proteins. These findings align with those from the phase I study, which reported AUC, specificity, and accuracy values above 91, 100, and 90.3%, respectively, for both proteins. However, there was a notable difference in sensitivity between phase I and II studies. In the pilot study, the sensitivity for both proteins was 69.9% (<xref ref-type="bibr" rid="ref45">Silva et al., 2020</xref>), whereas in the present study, the sensitivity was 90.6% for TpN17 and 97.2% for TmpA. It is important to note that the phase I study had some limitations, including the use of non-treponemal tests as reference tests for sample recharacterization, which may not correlate well with treponemal tests, and the inability to use immunofluorescence across the entire serological panel. Thus, the diagnostic performance in the phase I study may have been compromised by the limitation of the reference tests. In contrast, this study applied one non-treponemal (VDRL) and two treponemal (ELISA and FTA-ABS) reference tests to multiple samples, which improved the accuracy of the results. Furthermore, the inclusion of clinically well-defined serological samples obtained from a specialized center in ISTs (CEDAP) helped address this limitation.</p>
<p>The antigen&#x2019;s performance was evaluated in multiple studies for syphilis diagnosis, corroborating our findings. In a study by <xref ref-type="bibr" rid="ref38">Rodr&#x00ED;guez et al. (2002)</xref>, they assessed ELISA anti-TmpA and obtained high sensitivity (93.3%) and specificity (95.3%) values. Similarly, <xref ref-type="bibr" rid="ref16">IJsselmuiden et al. (1989)</xref> found a high specificity of 99.6% in TmpA ELISA. <xref ref-type="bibr" rid="ref27">Martin et al. (2008)</xref> evaluated an ELISA in-house (TpN47, TpN17, TpN15, and TmpA) and demonstrated 100% of sensitivity, specificity, and accuracy for all proteins. In contrast, an rTpN17-ELISA had lower sensitivity (84.4%) but excellent specificity (100%) (<xref ref-type="bibr" rid="ref49">Sun et al., 2009</xref>).</p>
<p>According to clinical stages of the infection, TmpA exhibited higher sensitivity for secondary syphilis (97.4%), following by primary syphilis (98.7%), and early latent syphilis (83.6%), while TpN17 displayed 100% sensitivity for primary and secondary syphilis and 93.2% for early latent syphilis. Both proteins showed 100% specificity across all stages. <xref ref-type="bibr" rid="ref39">Rostopira et al. (2003)</xref> demonstrated a sensitivity of 100% for both TmpA and TpN17 among primary seropositive individuals and secondary active syphilis. For latent syphilis, TmpA obtained 87%, and TpN17 95.7% sensitivity (<xref ref-type="bibr" rid="ref39">Rostopira et al., 2003</xref>). Furthermore, TmpA ELISA exhibited diagnostic performance of 76, 100, and 98% sensitivity for primary, secondary, and early latent syphilis, respectively (<xref ref-type="bibr" rid="ref16">Ijsselmuiden et al., 1989</xref>).</p>
<p><xref ref-type="bibr" rid="ref4">Brinkman et al. (2006)</xref> identified variations in the humoral immune response to <italic>T. pallidum</italic> proteins across different clinical stages. Typically, TpN47 and flagellins (TpN37, TpN33, and TpN30) are produced in primary syphilis, while TpN47, TmpA, TpN37, TpN34.5, TpN33, TpN30, TpN17, and TpN15 are more immunogenic in secondary and early latent syphilis (<xref ref-type="bibr" rid="ref31">Norris et al., 2001</xref>). However, ELISA&#x2019;s diagnostic capacity was consistently higher in all stages, possibly due to bacterial spread (including the central nervous system) along with local replication and a robust inflammatory response (<xref ref-type="bibr" rid="ref31">Norris et al., 2001</xref>; <xref ref-type="bibr" rid="ref19">LaFond and Lukehart, 2006</xref>; <xref ref-type="bibr" rid="ref42">Sandes et al., 2017</xref>). In individuals with late latent and tertiary syphilis, the humoral response is weaker, but some immunoglobulins (IgG) remain reactive to TTs compared to the NTTs (<xref ref-type="bibr" rid="ref31">Norris et al., 2001</xref>).</p>
<p>Various recombinant proteins, including TpN17 and TmpA, have shown promise for syphilis serodiagnosis and are used in combination with commercial ELISA tests. Several tests have already been evaluated for their diagnostic performance: Trep-Sure (Sensitivity: 99.3&#x2013;100%; Specificity: 82.6&#x2013;100%) (<xref ref-type="bibr" rid="ref3">Binnicker et al., 2011</xref>; <xref ref-type="bibr" rid="ref24">Malm et al., 2015</xref>; <xref ref-type="bibr" rid="ref5">Buono et al., 2017</xref>; <xref ref-type="bibr" rid="ref10">Fakile et al., 2018</xref>; <xref ref-type="bibr" rid="ref34">Park et al., 2019</xref>), ICE Syphilis Detection Pack (Sensibility: 100%; Specificity: 92&#x2013;100%) (<xref ref-type="bibr" rid="ref1">Aktas et al., 2007</xref>), Trep-ID (Sensitivity: 100%; Specificity: 99%) (<xref ref-type="bibr" rid="ref3">Binnicker et al., 2011</xref>), TP-ELISA (Sensitivity: 100%; Specificity: 91.9%; Accuracy: 95.4%; AUC: 99.9%) (<xref ref-type="bibr" rid="ref23">Liu et al., 2014</xref>), Enzywell (Sensitivity: 96.3&#x2013;100%; Specificity: 92&#x2013;99.7%) (<xref ref-type="bibr" rid="ref54">Young et al., 2000</xref>; <xref ref-type="bibr" rid="ref1">Aktas et al., 2007</xref>; <xref ref-type="bibr" rid="ref24">Malm et al., 2015</xref>), DIALAB Syphilis (Sensitivity: 98.4%; Specificity: 94.9%) (<xref ref-type="bibr" rid="ref30">Negash et al., 2018</xref>), RecomWell (Sensitivity: 98.9%; Specificity: 98.9%) (<xref ref-type="bibr" rid="ref41">Sambri et al., 2001</xref>), Architect Syphilis Tp ELISA (Sensitivity: 100%; Specificity: 97.8%) (<xref ref-type="bibr" rid="ref47">S&#x00F6;nmez et al., 2018</xref>), 3nd ELISA kit Dia-Syph and 2nd EIA (Sensitivity: 96.4%; Specificity: 99.7&#x2013;98%) (<xref ref-type="bibr" rid="ref39">Rostopira et al., 2003</xref>), Syphilis Screening ELISA (Sensitivity: 98.3%; Specificity: 98.7%) (<xref ref-type="bibr" rid="ref41">Sambri et al., 2001</xref>), Eti-syphilis-G (Sensitivity: 100% for all clinical stages; Specificity: 93%) (<xref ref-type="bibr" rid="ref6">Castro et al., 2003</xref>), Captia Select Syph-G (Sensitivity: 99%; Specificity: 98%) (<xref ref-type="bibr" rid="ref52">Woznicov&#x00E1; and Vali&#x0161;ov&#x00E1;, 2007</xref>), and others with elevated sensitivity and specificity values higher than 90% (<xref ref-type="bibr" rid="ref8">Cole et al., 2007</xref>).</p>
<p>Considering our results, these commercial ELISA tests provided concordant results. Other studies have evaluated the diagnostic performance of recombinant proteins for syphilis diagnosis with values below or equivalent to our findings: such as TS-EIA (Senitivity: 52%) (<xref ref-type="bibr" rid="ref13">Gratzer et al., 2014</xref>), Trep Check (Sensitivity: 63.4&#x2013;98.9%; Specificity: 95.6&#x2013;98.6%) (<xref ref-type="bibr" rid="ref51">Tsang et al., 2007</xref>; <xref ref-type="bibr" rid="ref3">Binnicker et al., 2011</xref>), ICE Syphilis Murex (Sensitivity: 75&#x2013;98.2%; Specificity: 99.2&#x2013;99.5%) (<xref ref-type="bibr" rid="ref44">Schmidt et al., 2000</xref>; <xref ref-type="bibr" rid="ref25">Manavi et al., 2006</xref>; <xref ref-type="bibr" rid="ref8">Cole et al., 2007</xref>), Vircell Syphilis ELISA (Sensitivity: 73.2%; Specificity: 62.6%) (<xref ref-type="bibr" rid="ref48">Sonmez et al., 2019</xref>), Enzygnost Syphilis (Sensitivity: 69.2&#x2013;100%; Specificity: 98.5&#x2013;99.8%) (<xref ref-type="bibr" rid="ref14">Guti&#x00E9;rrez et al., 2000</xref>; <xref ref-type="bibr" rid="ref44">Schmidt et al., 2000</xref>; <xref ref-type="bibr" rid="ref26">Marangoni et al., 2009</xref>), Chorus Syphilis Screen Recombinant (Sensitivity: 87.9%; Specificity: 91.2%), Euroimmun <italic>Treponema pallidum</italic> screen ELISA (Sensitivity: 87.5%; Specificity: 85.7%) (<xref ref-type="bibr" rid="ref48">Sonmez et al., 2019</xref>). Differences in performance between ELISA tests may have been influenced by various factors, including standardization, antigenic matrix, the number of samples evaluated, the analytical sensitivity, and the staging of infection.</p>
<p>In contrast to our findings, commercial ELISA tests using Murex ICE EIA demonstrated varying positivity rates: 84% for primary syphilis, 100% for secondary syphilis, 75% for early latent syphilis, and 100% for cases with an unknown duration (<xref ref-type="bibr" rid="ref25">Manavi et al., 2006</xref>). Meanwhile, <xref ref-type="bibr" rid="ref33">Owusu-Edusei et al. (2011)</xref> reported comparable results with 80% sensitivity for primary syphilis and 100% sensitivity for secondary and early latent syphilis, indicating lower sensitivity for early-stage infections. In the case of Trep-Sure, recomWell, Syphilis Screening ELISA, and Enzywell, their values consistently exceed 94% across all clinical stages, as previously documented (<xref ref-type="bibr" rid="ref54">Young et al., 2000</xref>; <xref ref-type="bibr" rid="ref35">Park et al., 2011</xref>, <xref ref-type="bibr" rid="ref34">2019</xref>, <xref ref-type="bibr" rid="ref36">2020</xref>).</p>
<p>Cross-reaction was evaluated against serological samples from individuals with unrelated diseases, including chronic Chagas disease, hepatitis B, hepatitis C, HIV-1/2, and HTLV-1/2. All samples were assessed by VDRL, ELISA, and FTA-ABS to rule out false positives due to IgG anti-<italic>T. pallidum</italic>. In the phase I study, cross-reactivity using TmpA was negligible, with only three positive samples (dengue, filariasis, and schistosomiasis) producing a false-positive result. No cross-reaction was observed for TpN17 in serum samples from non-bacterial infections. However, higher numbers of leptospirosis-positive samples presented positive results using TmpA (32.1%) and TpN17 (8.6%) (<xref ref-type="bibr" rid="ref45">Silva et al., 2020</xref>). TpN17 showed less cross-reaction compared to TmpA, as observed in the phase II study. Only one cross-reaction was observed (1.49%) for the chronic Chagas disease with TpN17, while TmpA showed cross-reactions for chronic Chagas disease (2.98%), HBV (1.0%), HCV (1.4%), HIV-1/2 (1.8%), and HTLV-1/2 (1.0%) positive samples. However, non-specific reactions were observed in these and other studies but were considered diagnostically irrelevant due to the low number of false-positive samples.</p>
<p><xref ref-type="bibr" rid="ref38">Rodr&#x00ED;guez et al. (2002)</xref> observed cross-reaction for ELISA anti-TmpA when serum samples were positive for mononucleosis, hepatitis, diabetes mellitus, HIV/AIDS, and old age. Antibodies anti-TpN17 (IgG) were recorded in 3.7% of cases in patients with gonorrhea, and IgM antibodies were detected in 2.1% of cases in the group with hepatitis C. For the TmpA protein, one false-positive result (2.5%) was found in a hepatitis B virus-infected patient (<xref ref-type="bibr" rid="ref39">Rostopira et al., 2003</xref>). <xref ref-type="bibr" rid="ref41">Sambri et al. (2001)</xref> evaluated 60 samples from the cross-reacting panel by recomWell Treponema IgG, and two samples were reactive: one from a Lyme disease patient and one from a patient with infectious mononucleosis. Other studies also observed cross-reaction for mononucleosis (10%) and Lyme borreliosis (13.3%) using Enzygnost Syphilis (combined proteins) (<xref ref-type="bibr" rid="ref14">Guti&#x00E9;rrez et al., 2000</xref>; <xref ref-type="bibr" rid="ref26">Marangoni et al., 2009</xref>). rTpN17-ELISA and rTpN15-17-47-ELISA returned positive results for systemic lupus erythematosus and rheumatic arthritis samples (<xref ref-type="bibr" rid="ref49">Sun et al., 2009</xref>). Furthermore, <xref ref-type="bibr" rid="ref52">Woznicov&#x00E1; and Vali&#x0161;ov&#x00E1; (2007)</xref> used Captia Select Syph-G and obtained cross-reaction for Lyme borreliosis, chlamydial urethritis, psychosis, and allergic dermatitis.</p>
</sec>
<sec sec-type="conclusions" id="sec12">
<label>5</label>
<title>Conclusion</title>
<p>In summary, both TmpA and TpN17 proteins demonstrated excellent diagnostic performance in distinguishing between positive and negative samples. Notably, the performance parameters in this assessment surpassed those observed in the phase I study. The utilization of both treponemal (ELISA and FTA-ABS) and non-treponemal (VDRL) reference tests for sample recharacterization, along with well-defined serology and clinical data, significantly contributed to these improved results. Additionally, the new standardization of experimental conditions enhanced the tests and led to advancements in the phase II study. In conclusion, our findings indicate that these proteins exhibit high diagnostic capacity, as evidenced by their specificity, sensitivity, accuracy, LR (+/&#x2212;), and DOR values in ELISA. Nonetheless, we recognize the potential for further enhancement in sensitivity through the utilization of antigenic mixtures, which will be the primary focus of our group&#x2019;s upcoming research endeavors.</p>
<sec id="sec13">
<label>5.1</label>
<title>Limitations</title>
<p>The primary limitations of this study included the absence of syphilis samples from pregnant women and cases of congenital syphilis, as well as the lack of samples from individuals with tertiary syphilis, which limited the evaluation of the diagnostic performance of both recombinant proteins. Additionally, the stratification of samples by clinical stage influenced the analysis of our results. Due to this stratification, each clinical stage had fewer samples compared to the sample size predicted by OpenEpi. Therefore, a concentration of diagnosed patients predominantly in secondary and recent latent syphilis stages limited the diversity of our sample collection. Another constraint was the inability to secure well-defined serologic samples for assessing cross-reactivity, resulting in a small number of samples being analyzed in this study, with the exclusion of <italic>Leptospira</italic>-positive samples.</p>
</sec>
</sec>
<sec sec-type="data-availability" id="sec14">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1">Supplementary material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec sec-type="ethics-statement" id="sec15">
<title>Ethics statement</title>
<p>The studies involving humans were approved by Institutional Review Board (IRB) for Human Research at the Gon&#x00E7;alo Moniz Institute of the Oswaldo Cruz Foundation (IGM-FIOCRUZ), Salvador, Bahia-Brazil, under protocol number 4.581.337 (CAAE 42341121.0.0000.0040). The studies were conducted in accordance with the local legislation and institutional requirements. The participants provided their written informed consent to participate in this study.</p>
</sec>
<sec sec-type="author-contributions" id="sec16">
<title>Author contributions</title>
<p>&#x00C2;S: Conceptualization, Formal analysis, Investigation, Methodology, Writing &#x2013; original draft, Writing &#x2013; review &#x0026; editing. AL: Investigation, Methodology, Writing &#x2013; original draft. LV: Investigation, Methodology, Writing &#x2013; original draft. RA: Methodology, Writing &#x2013; original draft. NF: Formal analysis, Investigation, Methodology, Writing &#x2013; original draft. TO: Investigation, Methodology, Writing &#x2013; original draft. MC: Investigation, Methodology, Writing &#x2013; original draft. FM: Writing &#x2013; original draft, Resources. NZ: Conceptualization, Formal analysis, Funding acquisition, Resources, Validation, Writing &#x2013; review &#x0026; editing. IS: Funding acquisition, Resources, Supervision, Writing &#x2013; review &#x0026; editing. FS: Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing &#x2013; review &#x0026; editing.</p>
</sec>
</body>
<back>
<sec sec-type="funding-information" id="sec17">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This research was supported by the Coordination for the Improvement of Higher Education Personnel in Brazil (CAPES; Finance Code 001 award to FS, 88887.637869/2021-00 award to LV, and 88887.637758/2021-00 award to NF) and the Research Support Foundation of the State of Bahia (FAPESB; BOL0543/2020 award to &#x00C2;S and BOL2173/2021 award to AL). IS, NZ, and FS are CNPq research grantees (processes no. 316456/2021-7, 304167/2019-3, and 309263/2020-4, respectively). The funders had no influence on the study design, data collection and analysis, decision to publish, or preparation of the manuscript.</p>
</sec>
<ack>
<p>The authors thank the CEDAP team for their kind reception and support in patient and sample selection.</p>
</ack>
<sec sec-type="COI-statement" id="sec18">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="sec100" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec sec-type="supplementary-material" id="sec19">
<title>Supplementary material</title>
<p>The Supplementary material for this article can be found online at: <ext-link xlink:href="https://www.frontiersin.org/articles/10.3389/fmicb.2024.1348437/full#supplementary-material" ext-link-type="uri">https://www.frontiersin.org/articles/10.3389/fmicb.2024.1348437/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Table_1.xlsx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Table_2.xlsx" id="SM2" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
<fn-group>
<fn id="fn0001"><p><sup>1</sup><ext-link xlink:href="https://www.openepi.com" ext-link-type="uri">https://www.openepi.com</ext-link></p></fn>
</fn-group>
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