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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2023.1114228</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Dynamic changes in gut microbiota during pregnancy among Chinese women and influencing factors: A prospective cohort study</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Li</surname> <given-names>Muxia</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/2122439/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Zhang</surname> <given-names>Guohua</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Cui</surname> <given-names>Lijun</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Zhang</surname> <given-names>Lin</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Zhou</surname> <given-names>Qian</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1922280/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Mu</surname> <given-names>Chenxue</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Chi</surname> <given-names>Ruixin</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Zhang</surname> <given-names>Na</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1725054/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Ma</surname> <given-names>Guansheng</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1417299/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Nutrition and Food Hygiene, School of Public Health, Peking University</institution>, <addr-line>Beijing</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>The Third Department of Obstetrics, Shijiazhuang Obstetrics and Gynecology Hospital</institution>, <addr-line>Shijiazhuang</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>The Seventh Department of Obstetrics, Shijiazhuang Obstetrics and Gynecology Hospital</institution>, <addr-line>Shijiazhuang</addr-line>, <country>China</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Pediatrics, The Third Hospital of Hebei Medical University</institution>, <addr-line>Shijiazhuang</addr-line>, <country>China</country></aff>
<aff id="aff5"><sup>5</sup><institution>Department of Computer Science, City University of Hong Kong</institution>, <addr-line>Hong Kong</addr-line>, <country>Hong Kong SAR, China</country></aff>
<aff id="aff6"><sup>6</sup><institution>Laboratory of Toxicological Research and Risk Assessment for Food Safety, Peking University</institution>, <addr-line>Beijing</addr-line>, <country>China</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Dongsheng Che, Jilin Agricultural University, China</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Qian Zhu, Institute of Subtropical Agriculture (CAS), China; Tingtao Chen, Nanchang University, China; Wen-Jing Wang, Beijing Genomics Institute (BGI), China</p></fn>
<corresp id="c001">&#x002A;Correspondence: Guansheng Ma, <email>mags@bjmu.edu.cn</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Microorganisms in Vertebrate Digestive Systems, a section of the journal Frontiers in Microbiology</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>29</day>
<month>03</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1114228</elocation-id>
<history>
<date date-type="received">
<day>19</day>
<month>12</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>03</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2023 Li, Zhang, Cui, Zhang, Zhou, Mu, Chi, Zhang and Ma.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Li, Zhang, Cui, Zhang, Zhou, Mu, Chi, Zhang and Ma</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Gut microbiota (GM) dynamics during pregnancy vary among different populations and are affected by many factors, such as living environments and diet. This study aims to observe and evaluate the changes in the structure and function of the GM from the first to the third trimester of pregnancy in Chinese women, and to explore the main factors affecting the changes in intestinal microecology. Fifty-five Chinese pregnant women were recruited for this study and their fecal samples were collected during the first (P1), second (P2), and third trimesters (P3) of pregnancy. We exploited metagenomic sequencing to compare the composition and function of the GM in different pregnancy periods. Bioinformatic analysis revealed that there were differences in the composition of the GM among P1, P2, and P3, as indicated by the increase in &#x03B1;-diversity and &#x03B2;-diversity of the GM and the differences in the relative abundances of distinct bacterial phyla. Gestational diabetes mellitus (GDM) was the main factor (<italic>P</italic> &#x003C; 0.05) that affected the changes in GM at various stages of pregnancy. There were also disparities in the structure of the GM between the GDM group and non-GDM group in the P1, P2, and P3. The GDM group exhibited increased abundances in <italic>Ruminococcus_gnavus</italic>, <italic>Akkermansia_muciniphila</italic>, <italic>Alistipes_shahii</italic>, <italic>Blautia_obeum</italic>, and <italic>Roseburia_intestinalis;</italic> while, the abundances of <italic>Bacteroides coprocola</italic>, <italic>Bacteroides plebeius</italic>, <italic>Erysipelatoclostridium ramosum</italic>, and <italic>Prevotella copri</italic> were increased in the non-GDM group. Three of the four species enriched in the non-GDM group manifestied significantly negative correlations with the insulin-signaling pathway and lipopolysaccharide biosynthesis (<italic>r</italic> &#x2264; &#x2212;0.3, adjusted <italic>P</italic> &#x003C; 0.05). In the GDM group, <italic>Bacteroides vulgatus</italic> and <italic>Ruminococcus gnavus</italic> were significantly and positively correlated with insulin signaling pathway and lipopolysaccharide biosynthesis (<italic>r</italic> &#x2264; &#x2212;0.3, adjusted <italic>P</italic> &#x003C; 0.05) among the species enriched from early pregnancy. Virtually all of the species enriched in P2 and P3 were positively correlated with steroid hormone biosynthesis. These results suggest a potential role for the GM in the development of GDM, enabling the potential prevention of GDM by targeting the GM.</p>
</abstract>
<kwd-group>
<kwd>pregnancy</kwd>
<kwd>gut microbiota</kwd>
<kwd>dynamic changes</kwd>
<kwd>gestational diabetes mellitus</kwd>
<kwd>metagenomics analysis</kwd>
</kwd-group>
<contract-sponsor id="cn001">Danone<named-content content-type="fundref-id">10.13039/100007773</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="48"/>
<page-count count="10"/>
<word-count count="7034"/>
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</article-meta>
</front>
<body>
<sec id="S1" sec-type="intro">
<title>Introduction</title>
<p>Pregnancy is an extra-ordinary biologic process that women may experience during their lives, which involves a variety of physiologic changes. Some of these changes have been demonstrated, such as alterations in hormonal and metabolic levels. Only in recent years, investigators have gradually appreciated that the gut microbiota (GM) dynamics during pregnancy may also participate in physiologic activities and further regulate metabolism, thereby affecting the health of both mother and offspring (<xref ref-type="bibr" rid="B31">Nuriel-Ohayon et al., 2016</xref>).</p>
<p>Several reports observed have revealed attenuated microbial diversity of the GM accordance with pregnancy progression throughout the three trimesters (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B11">DiGiulio et al., 2015</xref>; <xref ref-type="bibr" rid="B8">Cortez et al., 2019</xref>; <xref ref-type="bibr" rid="B46">Wu et al., 2020</xref>). During early pregnancy, the composition of the GM resembles that of healthy non-pregnant individuals (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B8">Cortez et al., 2019</xref>). However, the composition of the GM gradually changes with the progression of pregnancy; that is, a diminution in &#x03B1;-diversity (the diversity of species within individuals) and commensurate elevation in &#x03B2;-diversity (a dissimilarity between individuals). In the third trimester of pregnancy, the relative abundance of Proteobacteria and Actinobacteria with their pro-inflammatory effects increase significantly, becoming the dominant microbiota (<xref ref-type="bibr" rid="B33">Ponzo et al., 2019a</xref>). In contrast, the relative abundances of butyrate-producing bacteria, such as <italic>Clostridium</italic> and <italic>Eubacterium</italic> decreased (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B11">DiGiulio et al., 2015</xref>; <xref ref-type="bibr" rid="B46">Wu et al., 2020</xref>). These results suggest that the GM may be involved in mediating glucose and lipid metabolism and inflammatory responses during pregnancy, and that these metabolic changes modulate intestinal microecology throughout pregnancy and even postpartum, thus constituting one of the ways by which the health of offspring is affected. However, the mechanism underlying this action remains unclear. A previous study showed that obese pregnant women had reduced abundances of intestinal <italic>Bifidobacteria</italic> and <italic>Bacteroides</italic>, and significantly increased abundances of <italic>Staphylococcus</italic> and <italic>Escherichia coli</italic>, compared with normal weight women during pregnancy (<xref ref-type="bibr" rid="B39">Santacruz et al., 2010</xref>; <xref ref-type="bibr" rid="B13">Gomez-Arango et al., 2016</xref>). Gestational weight gain (GWG) can reduce the diversity of the GM during pregnancy, increase the abundance of <italic>E. coli</italic>, and decrease the number of <italic>Bifidobacterium</italic> and <italic>Akk</italic> bacteria (<xref ref-type="bibr" rid="B41">Stanislawski et al., 2017</xref>). GM dynamics were also altered for pregnant women with pregnancy complications such as gestational diabetes mellitus (GDM) and hypertension (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>; <xref ref-type="bibr" rid="B24">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B7">Chen et al., 2020</xref>). Studies have shown that the GM may be a key factor affecting the occurrence and development of GDM. The &#x03B1;-diversity of the GM in GDM patients was significantly reduced, and the content of <italic>Parobacteria</italic> and <italic>Klebsiella</italic> was higher, while the abundances of <italic>Bifidobacterium</italic> and <italic>Eubacterium</italic> were higher in healthy pregnant women (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>), indicating that the GDM state is related to the GM imbalance. In addition, the abundances of Actinobacteria, <italic>Collinsella</italic> and <italic>Desulfovibrio</italic> in the gut of the GDM women were elevated relative to that of euglycemic pregnant women, and this difference persisted until after delivery. The diversity of the GM was also reduced in patients with preeclampsia, with the numbers of pathogenic bacteria such as <italic>Clostridium perfringens</italic> and <italic>Breedella</italic> increasing and the numbers of beneficial bacteria such as <italic>Coprococcus dextris</italic> decreasing as the pregnancy progressed (<xref ref-type="bibr" rid="B24">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B41">Stanislawski et al., 2017</xref>), this indicated the GM of patients with preeclampsia contained a certain degree of pathogenicity and was involved in the procession of this disease. In brief, GM plays an important role in the occurrence and development of various pregnancy-related diseases by participating in various metabolic pathways, and in immune regulation and inflammation in the human body. In addition, the association between maternal GM and spontaneous preterm birth, gestational hypothyroidism, postpartum depression and other factors also needs to be explored by supplemental studies.</p>
<p>Intriguingly, the GM can be orchestrated by various factors such as host genetics and lifestyle (<xref ref-type="bibr" rid="B37">Rothschild et al., 2018</xref>; <xref ref-type="bibr" rid="B35">Redondo-Useros et al., 2020</xref>). Investigators have recently ascertained that environments imposed dominant effects on the GM (<xref ref-type="bibr" rid="B14">He et al., 2018</xref>; <xref ref-type="bibr" rid="B42">Sun et al., 2021</xref>), suggesting differential GM dynamics during pregnancy in distinct populations. Therefore, exploration of GM variations during pregnancy in diverse populations should improve GM-targeted interventions (<xref ref-type="bibr" rid="B10">Deschasaux et al., 2018</xref>; <xref ref-type="bibr" rid="B37">Rothschild et al., 2018</xref>).</p>
<p>There are few extent reports on gestational variations in the GM for Chinese women in particular environments and who have adopted special dietary styles. In this study, we conducted a prospective cohort study to evaluate the related factors affecting GM the dynamics in pregnant women in Shijiazhuang, Hebei Province. The aim of this study was to evaluate the changes in the GM structure and function from early to late pregnancy and to discern the main factors that affected the changes in intestinal microecology in this specific geographic region and wit respect to specific dietary style. Our study should provide novel evidence for the presence fo the GM dynamics during pregnancy, based on findings from our specific population.</p>
<p>We hypothesize that (1) there are differences in the composition of the GM among the first (P1), second (P2), and third trimesters (P3) of pregnancy. (2) nutrient intake or health status comprise the main factors affecting the changes in the GM. (3) there are also differences in the composition and function of the GM with respect to the primary affecting factors.</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="S2.SS1">
<title>Study design</title>
<p>This was a prospective cohort study, and recruitment was conducted at Shijiazhuang Obstetrics and Gynecology Hospital, Hebei Province, China. Sixty-four pregnant women who met the inclusion and exclusion were recruited. Inclusion criteria were women (1) aged between 18 and 35 years; (2) with established medical records and who underwent regular prenatal examination since early pregnancy (11&#x2013;13 weeks of gestation) at the Shijiazhuang Obstetrics and Gynecology Hospital; (3) of Han nationality; (4) who experienced natural conception; and (5) who were willing to be followed up until the third trimester (35&#x2013;37 weeks of gestation) of pregnancy. Exclusion criteria were women (1) with infectious diseases such as AIDS, active hepatitis, syphilis, etc.; (2) with chronic diseases such as cardiovascular disease, kidney disease, digestive diseases and other diseases before pregnancy; (3) undergoing multiple pregnancies; and (4) who used antibiotic and/or microbiologic agents within the previous month. During the follow-up, nine pregnant women were lost to follow-up due to early miscarriage or other personal reasons. Ultimately, 55 pregnant women were included in this study.</p>
<p>This study was conducted in Shijiazhuang City, Hebei Province, which is located in northern China. The environment in this area is a temperate monsoon climate, and diets chiefly consist of cereals and vegetables. Dietary intake by pregnant women during P1, P2, and P3 was measured using a validated semi-quantitative food frequency questionnaire (FFQ), and food intake was recorded for the month prior to each visit. The questionnaire listed 119 foods, in which the type, frequency, and amount of food were assessed. Nutrient intake was assessed by trained researchers using the <italic>Chinese Food Composition Table</italic>.</p>
<p>Pregnancy complications and other disorders and symptoms were diagnosed by obstetricians according to their respective diagnostic criteria (<xref ref-type="bibr" rid="B38">Rouse et al., 2016</xref>; <xref ref-type="bibr" rid="B26">Mack and Tomich, 2017</xref>; <xref ref-type="bibr" rid="B40">Sinkey et al., 2020</xref>), in combination with the participant&#x2019;s clinical presentation, physical examination, and corresponding laboratory tests.</p>
</sec>
<sec id="S2.SS2">
<title>Ethical review</title>
<p>The study protocol was reviewed and approved by the Peking University Biomedical Ethics Committee (IR0001052-19150), and conducted in accordance with the principles of the Declaration of Helsinki. All participants read the informed consent forms before enrollment, voluntarily agreed to participate in this study, and signed the informed consent forms. Signed informed consent (in duplicate) was obtained from each participant prior to participation in this study, with one provided to the participant and the other to the researchers.</p>
</sec>
<sec id="S2.SS3">
<title>Data collection</title>
<p>The participants were asked to fill in a study questionnaire requesting the participants&#x2019; basic demographic details. And anthropometric measurements were taken by trained nursing staff; measurements included height, weight and blood pressure. Body mass index (BMI) was calculated as weight (kg)/height (cm)<sup>2</sup>. The participants were asked to fill in the FFQ and provided their fecal samples during P1, P2, and P3 of pregnancy. A total of 5 g of fecal sample was collected by each participant in the morning with a clean sterile spoon and placement into sterile and airtight tube on the day of each visit, and this was stored at &#x2212;80&#x00B0;C within two hours after collection.</p>
</sec>
<sec id="S2.SS4">
<title>DNA extraction and sequencing</title>
<p>Microbial DNA was extracted following the protocol included in the QIAamp DNA stool kit (Qiagen). The quality and quantity of the extracted DNA were measured using NanoDrop (Thermo Scientific) and Qubit (Thermo Fisher Scientific, Singapore). The DNA fragment size was evaluated by agarose gel electrophoresis. Then, the short-insert DNA libraries were generated using a NEBNext<sup>&#x00AE;</sup> UltraTM DNA Library Prep Kit (NEB, USA), and we executed 2 &#x00D7; 150bp paired-end sequencing via an Illumina NovaSeq 6000 platform (Illumina, San Diego, CA, United States).</p>
</sec>
<sec id="S2.SS5">
<title>Metagenomic analysis</title>
<p>Raw sequencing reads were filtered to trim low-quality sequences, library primers and adaptors using Trimmomatic (v0.39.2) with default parameters (<xref ref-type="bibr" rid="B4">Bolger et al., 2014</xref>). The host DNA sequences were then removed by mapping filtered reads against the human genome database (version hg38) employing bowtie2 (v2.3.5.1) (<xref ref-type="bibr" rid="B21">Langmead and Salzberg, 2012</xref>). The unmapped high-quality reads were annotated via MetaPhlAn3 (v3.0.13) (<xref ref-type="bibr" rid="B3">Beghini et al., 2021</xref>). We constructed the gene functional profiles by with Humann3 against the built-in marker gene database, and the abundances of taxonomic profiles and KEGG pathways were then calculated by read counts (<xref ref-type="bibr" rid="B3">Beghini et al., 2021</xref>). The indices of microbial diversity were assessed by applying the Qiime2 package (<xref ref-type="bibr" rid="B5">Bolyen et al., 2019</xref>).</p>
</sec>
<sec id="S2.SS6">
<title>Statistical and comparative metagenomic analysis</title>
<p>All statistical analyses were performed in R (version 3.4.1). We selected for further analysis those genera and species that represented &#x2265; 0.01% abundance in at least one subject. Principal coordinate analysis (PCoA) based on the <italic>vegan</italic> package was adopted to reduce data dimensions. The impact of various factors on GM distributions was assessed with permutational multivariate analysis of variance (PERMANOVA) with 9,999 permutations (package <italic>vegan</italic> in R) (<xref ref-type="bibr" rid="B32">Oksanen et al., 2013</xref>), and Bray-Curtis distance was applied to assess GM dissimilarity between samples using the <italic>adonis2</italic> function (in the <italic>vegan</italic> package in R). Shannon diversity, Bray-Curtis dissimilarity, and the abundances of microbiota were compared using the Wilcoxon rank sum test (inter-group) or the Kruskal&#x2013;Wallis test (among three groups). Spearman correlation was executed to evaluate the association between microbial features and gene functions (as visualized by the <italic>pheatmap</italic> package in R) (<xref ref-type="bibr" rid="B18">Kolde and Kolde, 2018</xref>). The <italic>p</italic>-values for multiple tests were adjusted with the Benjamini&#x2013;Hochberg method using the &#x201C;function p.adjust.&#x201D; Adjusted <italic>p</italic>-value &#x003C;0.05 were defined as statistically significant. Data visualization was conducted with the <italic>ggplot2</italic> package in R (<xref ref-type="bibr" rid="B45">Wickham, 2016</xref>).</p>
</sec>
</sec>
<sec id="S3">
<title>Data availability</title>
<p>The raw data were submitted to the CNGB Sequence Archive (CNSA) under Project no. CNP0003669. The sample-related metadata in this article are available upon reasonable request.</p>
</sec>
<sec id="S4" sec-type="results">
<title>Results</title>
<sec id="S4.SS1">
<title>Characteristics of subject recruitment</title>
<p>A total of 55 Chinese women were analyzed, and their characteristics were depicted in <xref ref-type="table" rid="T1">Table 1</xref> and <xref ref-type="supplementary-material" rid="TS1">Supplementary Table 1</xref>. The majority of the recruited pregnant women in our study exhibited a normal BMI (<italic>n</italic> = 33/55, 60%). There were also 13 overweight (23.6%), and nine obese (16.4%). Two recruited individuals manifested pre-pregnancy diabetes and hypertension (at enrollment, the condition was stable, with blood glucose and blood pressure in the normal ranges). Of all subjects, 14 (<italic>n</italic> = 14/55, 25.5%) were diagnosed with GDM, nine (<italic>n</italic> = 9/55, 16.4%) with gestational hypertension or preeclampsia, and nine (<italic>n</italic> = 9/55, 16.4%) with anemia. The collection process was displayed in <xref ref-type="fig" rid="F1">Figure 1</xref>.</p>
<table-wrap position="float" id="T1">
<label>TABLE 1</label>
<caption><p>Basic characteristic of study subjects.</p></caption>
<table cellspacing="5" cellpadding="5" frame="box" rules="all">
<thead>
<tr>
<td valign="top" align="left" style="color:#ffffff;background-color: #7f8080;"></td>
<td valign="top" align="center" style="color:#ffffff;background-color: #7f8080;">All (<italic>N</italic> = 55)</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Age</bold></td>
</tr>
<tr>
<td valign="top" align="left">Mean &#x00B1; SD</td>
<td valign="top" align="center">30.07 &#x00B1; 4.01</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Parity, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">First birth</td>
<td valign="top" align="center">33 (60)</td>
</tr>
<tr>
<td valign="top" align="left">Second birth</td>
<td valign="top" align="center">22 (40)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Educational status, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Primary</td>
<td valign="top" align="center">2 (3.6)</td>
</tr>
<tr>
<td valign="top" align="left">Secondary</td>
<td valign="top" align="center">24 (43.7)</td>
</tr>
<tr>
<td valign="top" align="left">Tertiary</td>
<td valign="top" align="center">29 (52.7)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Monthly income (yuan), <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">&#x003C;5,500</td>
<td valign="top" align="center">26 (47.3)</td>
</tr>
<tr>
<td valign="top" align="left">5,500&#x2013;10,000</td>
<td valign="top" align="center">17 (30.9)</td>
</tr>
<tr>
<td valign="top" align="left">&#x003E;10,000</td>
<td valign="top" align="center">3 (5.5)</td>
</tr>
<tr>
<td valign="top" align="left">Unknown</td>
<td valign="top" align="center">9 (16.4)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Pre-pregnancy weight (kg)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Mean &#x00B1; SD</td>
<td valign="top" align="center">62.35 &#x00B1; 11.64</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Pre-pregnancy BMI (kg/m<sup>2</sup>)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Mean &#x00B1; SD</td>
<td valign="top" align="center">23.70 &#x00B1; 4.31</td>
</tr>
<tr>
<td valign="top" align="left">Normal</td>
<td valign="top" align="center">33 (60.0)</td>
</tr>
<tr>
<td valign="top" align="left">Overweight</td>
<td valign="top" align="center">13 (23.6)</td>
</tr>
<tr>
<td valign="top" align="left">Obese</td>
<td valign="top" align="center">9 (16.4)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Pre-pregnancy diabetes, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">No</td>
<td valign="top" align="center">54 (98.2)</td>
</tr>
<tr>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">1 (1.8)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Pre-pregnancy hypertension, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">No</td>
<td valign="top" align="center">54 (98.2)</td>
</tr>
<tr>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">1 (1.8)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Use of folic acid, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Not taking</td>
<td valign="top" align="center">4 (7.3)</td>
</tr>
<tr>
<td valign="top" align="left">3 months before menopause</td>
<td valign="top" align="center">13 (23.6)</td>
</tr>
<tr>
<td valign="top" align="left">2 months before menopause</td>
<td valign="top" align="center">9 (16.4)</td>
</tr>
<tr>
<td valign="top" align="left">After menopause</td>
<td valign="top" align="center">29 (52.7)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Smoking status, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Never</td>
<td valign="top" align="center">53 (96.4)</td>
</tr>
<tr>
<td valign="top" align="left">Occasionally</td>
<td valign="top" align="center">2 (3.6)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Drinking status, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Never</td>
<td valign="top" align="center">48 (87.3)</td>
</tr>
<tr>
<td valign="top" align="left">Occasionally</td>
<td valign="top" align="center">7 (12.7)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color: #dcdcdc;"><bold>Pregnancy complications, <italic>n</italic> (%)</bold></td>
</tr>
<tr>
<td valign="top" align="left">GDM</td>
<td valign="top" align="center">14 (25.5)</td>
</tr>
<tr>
<td valign="top" align="left">Gestational hypertension/preeclampsia</td>
<td valign="top" align="center">9 (16.4)</td>
</tr>
<tr>
<td valign="top" align="left">Anemia</td>
<td valign="top" align="center">9 (16.4)</td>
</tr>
</tbody>
</table></table-wrap>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Procedures regarding of basic information and sample collection in the present study.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmicb-14-1114228-g001.tif"/>
</fig>
</sec>
<sec id="S4.SS2">
<title>Microbiotal composition and gene profiles</title>
<p>After data filtration, the total number of clean reads was 11.29 Gb (37.33 &#x00B1; 13.92 Mb, median &#x00B1; SD). The ratio of taxonomic annotation averaged 58.95% based on the MetaPhlAn database, and the mapped gene number averaged 217,577 based on the HUMAnN database.</p>
</sec>
<sec id="S4.SS3">
<title>GM differences among the first, second and third trimesters</title>
<p>Principal coordinate analysis indicated that microbial samples were distributed according to sampling timepoints P1, P2, and P3 (<xref ref-type="fig" rid="F2">Figure 2A</xref>). In consistence, we found increased microbial diversity as the trimester progressed, though this was no statistical significant (<xref ref-type="fig" rid="F2">Figure 2B</xref>). Further analysis showed that the dissimilarity in microbial samples between the P1 and P2 was lower than that between P3 and P1 or P2, though this was also not statistically significant (<xref ref-type="fig" rid="F2">Figures 2A, C</xref>). Additionally, intra-group variations increased notably and phylum-level GM structure changed following trimester progression (<xref ref-type="fig" rid="F2">Figures 2D, E</xref>). For instance, the level of Bacteroidetes decreased (averaging 52.85, 48.66, and 36.33% in P1, P2, and P3, respectively) and Proteobacteria elevated (averaging 2.07, 4.83, and 8.89% in P1, P2, and P3, respectively) as trimesters progressed (<xref ref-type="fig" rid="F2">Figure 2E</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Overall differences in the gut microbiota (GM) among P1, P2 and P3. <bold>(A)</bold> Principal coordinate analysis (PCoA) based on Jensen-Shannon divergence as to distance measurement, suggested that microbial distribution in P3 samples differed from those in P1 and P2. <bold>(B)</bold> Comparison of alpha-diversity for P1, P2, and P3 microbial samples; the number represents adjusted <italic>P</italic>-value. <bold>(C)</bold> The Bray-Curtis distance for microbial samples between P1 and P2 was significantly different from the distance between P1 and P3 as well as between P2 and P3, suggesting greater variation in the GM in P3. <bold>(D)</bold> Inter-individual Bray-Curtis distance of microbial samples at each time point, indicating greater heterogeneity in microbial samples in P3. <bold>(E)</bold> Phylum-level microbial structure at P1, P2, and P3 timepoints. Bacteroidetes continued to decreased and Proteobacteria to increase commensurate with trimester. P1, P2, and P3 represent the first, second and third trimesters, respectively. The Wilcoxon rank-sum test was applied to analyze the significance of inter-group differences, and the <italic>P</italic>-value was adjusted with the Benjamini&#x2013;Hochberg method. &#x002A;&#x002A;, &#x002A;&#x002A;&#x002A;&#x002A; represent adjusted <italic>P</italic> &#x003C; 0.01 and <italic>P</italic> &#x003C; 0.0001, respectively.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmicb-14-1114228-g002.tif"/>
</fig>
</sec>
<sec id="S4.SS4">
<title>GDM contributes significantly to inter-individual variations in GM dynamics</title>
<p>Spearman correlation analysis showed that there was no significant correlation between nutrient intake and gut microbiota (top 20 species level bacteria) during pregnancy (<xref ref-type="supplementary-material" rid="TS2">Supplementary Table 2</xref>). In our analysis, we included factors that may affect GM dynamics, such as baseline mid-level GM structure, nutrient intake (including macronutrients and micronutrients), health status, and socioeconomic status. Permutational multivariate analysis of variance (PERMANOVA) indicated that the third principal component of health status (PCoA3_h) contributed significantly to the time-associated GM variations (adjusted <italic>P</italic> &#x003C; 0.05) (<xref ref-type="fig" rid="F3">Figure 3A</xref>). And we also determined that GDM represented the most important component for PCoA3_h, suggesting a notable association between the GDM and GM dynamics (<xref ref-type="fig" rid="F3">Figure 3B</xref>). Further analysis showed that microbial diversity in the GDM group was higher than that in the non-GDM group (adjusted <italic>P</italic> &#x003C; 0.05 in the P3) (<xref ref-type="fig" rid="F3">Figure 3C</xref>). Additionally, the inter-individual dissimilarity of microbial samples in the GDM group was markedly lower than that in the non-GDM group, suggestive of higher GM structural homogeneity in the GDM group, and the significance was higher in the P3 (<xref ref-type="fig" rid="F3">Figure 3D</xref>). We also consistently found increased numbers of species showing a changing trend (increase or decrease) between the GDM and non-GDM as the trimester progressed (<xref ref-type="fig" rid="F3">Figure 3E</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p>Factors impacting GM dynamics in accordance with trimester progression. <bold>(A)</bold> Permutational multivariate analysis of variance (PERMANOVA) was adopted to assess the effects of several indices on GM dynamics: the variable was more significant when the point was located nearer the outer circle. PCoA1_species_p1, PCoA2_species_p1, and PCoA3_species_p1 represent the first, second, and third principal components for baseline species-level GM structures, respectively. PCoA1_h, PCoA2_h, and PCoA3_h represent the first, second, and third principal components for health status, including GDM, hypertension, anemia, obesity, pre-pregnancy diabetes and hypertension. PCoA1_n, PCoA2_n, and PCoA3_n represent the first, second, and third principal components for daily nutrient intake at each trimester, including micro- and macro-nutrients. PCoA1_s, PCoA2_s, and PCoA3_s represent the first, second, and third principal components for socioeconomic status, including income and education. Analytic result exhibited a notable association between PCoA3_h and GM dynamics. <bold>(B)</bold> Contribution of factors in PCoA3_h, suggesting that GDM contributed &#x2265; 50% to the PCoA3_h. <bold>(C)</bold> The differences in Shannon index between GDM and non-GDM women at the P1, P2, and P3 timepoints. Women with GDM manifested higher microbial diversity than non-GDM women, and the difference was significant at the P3 timepoints. <bold>(D)</bold> Inter-individual Bray-Curtis distance with respect to microbial samples for women with GDM was significantly lower than that for non-GDM women, suggesting a greater similarity of microbial samples in the GDM group. <bold>(E)</bold> For the P2_P1 GM changes, 16 species possessed similar changing trends (increase or decrease) and 51 species showed different changing trends between GDM and non-GDM women. For the P3_P2 GM changes, 16 species had a similarly changing trend and 70 species had different changing trends between GDM and non-GDM women. P1, P2, and P3 represent the first, second, and third trimesters, respectively. The Wilcoxon rank-sum test was applied to analyze the significance of inter-group differences, and the <italic>P</italic>-value was adjusted by the Benjamini&#x2013;Hochberg method. &#x002A;, &#x002A;&#x002A;, &#x002A;&#x002A;&#x002A;&#x002A; represent adjusted <italic>P</italic> &#x003C; 0.05, <italic>P</italic> &#x003C; 0.01 and <italic>P</italic> &#x003C; 0.0001, respectively.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmicb-14-1114228-g003.tif"/>
</fig>
</sec>
<sec id="S4.SS5">
<title>Differences in structural and functional GM dynamics between women with GDM and those without GDM</title>
<p>We observed three types of differential dynamics with regard to microbial species that began to accumulate in GDM or non-GDM women at P1, P2 and P3 (<xref ref-type="fig" rid="F4">Figures 4A&#x2013;C</xref>). For the species showing different abundances between GDM and non-GDM groups at each trimester, four continued to accumulate in the non-GDM group from P1 onward: <italic>Bacteroides coprocola</italic>, <italic>Bacteroides plebeius</italic>, <italic>Erysipelatoclostridium ramosum</italic> and <italic>Prevotella copri</italic> (<xref ref-type="fig" rid="F4">Figure 4A</xref>). Further analysis indicated that three of these four species possessed a notably negative correlation with the insulin-signaling pathway and lipopolysaccharide biosynthesis (<italic>r</italic> &#x2264; &#x2212;0.3, adjusted <italic>P</italic> &#x003C; 0.05), but we noted no significant correlation with steroid hormone biosynthesis (<xref ref-type="fig" rid="F3">Figure 3D</xref>). Of the species enriched in the GDM group at the three sampling timepoints, <italic>Bacteroides vulgatus</italic>, and <italic>Ruminococcus gnavus</italic> were noteworthy in their positive association with the insulin-signaling pathway as well as lipopolysaccharide biosynthesis (<italic>r</italic> &#x2264; &#x2212;0.3, adjusted <italic>P&#x003C;</italic>0.05) (<xref ref-type="fig" rid="F4">Figures 4A, D</xref>). For species that accumulated in the GDM group from P2 onward, seven were positively associated with steroid hormone biosynthesis, while only one species (<italic>Firmicutes_bacterium_CAG_83</italic>) was slightly negatively associated with the insulin-signaling and lipopolysaccharide biosynthesis (<xref ref-type="fig" rid="F4">Figures 4A, D</xref>). For species enriched in the GDM group at the P3 onward, five were positively associated with steroid hormone biosynthesis, including <italic>Alistipes putridinis</italic> and <italic>Barnesiella intestinihominis;</italic> and also associated negatively with insulin signaling or lipopolysaccharide synthesis (<xref ref-type="fig" rid="F4">Figures 4A, D</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Differences in the relative abundances of species between women with of without GDM at the three timepoints. The y-axis in Panels <bold>(A&#x2013;C)</bold> represent log10 values of the relative abundances. The blue and red lines represent non-GDM and GDM groups, respectively. <bold>(D)</bold> The red, blue and orange colors of the species designate differing distributions among groups with respect to P1, P2, and P3, respectively. The colors in the heatmap reflect positive (red, <italic>r</italic> &#x2265; 0.3, adjusted <italic>P</italic> &#x003C; 0.05) and negative (blue, <italic>r</italic> &#x2264; &#x2013;0.3, adjusted <italic>P</italic> &#x003C; 0.05) associations between the kegg3 function and the selected species. P1, P2, and P3 indicate the first, second, and third trimesters, respectively. The <italic>P</italic>-value was adjusted using the Benjamini&#x2013;Hochberg method.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmicb-14-1114228-g004.tif"/>
</fig>
</sec>
</sec>
<sec id="S5" sec-type="discussion">
<title>Discussion</title>
<p>Emerging studies have revealed the presence of GM dynamics during pregnancy (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B11">DiGiulio et al., 2015</xref>; <xref ref-type="bibr" rid="B31">Nuriel-Ohayon et al., 2016</xref>, <xref ref-type="bibr" rid="B30">Neuman and Koren, 2017</xref>, <xref ref-type="bibr" rid="B8">Cortez et al., 2019</xref>). As GM structures can be modulated by host and environmental factors, it is important to explore gestational GM dynamics for different populations and then apply personalized GM-targeted interventions to improve health during pregnancy.</p>
<p>Consistent with prior reports (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B11">DiGiulio et al., 2015</xref>; <xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>; <xref ref-type="bibr" rid="B1">Abdullah et al., 2022</xref>), we observed gradual GM changes that paralleled the progression of pregnancy. We herein found a gradual increase in the &#x03B1;-diversity index (Shannon index) during P1, P2 and P3 of pregnancy, as reported in a previous Italian study (<xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>). In contrast, other reports found no obvious changes in GM diversity during pregnancy (<xref ref-type="bibr" rid="B11">DiGiulio et al., 2015</xref>; <xref ref-type="bibr" rid="B1">Abdullah et al., 2022</xref>). This discrepancy may be partially explained by different health statuses, diet and lifestyles specific to distinct populations (<xref ref-type="bibr" rid="B14">He et al., 2018</xref>; <xref ref-type="bibr" rid="B37">Rothschild et al., 2018</xref>; <xref ref-type="bibr" rid="B35">Redondo-Useros et al., 2020</xref>; <xref ref-type="bibr" rid="B42">Sun et al., 2021</xref>). Congruent with previous studies, we identified increased &#x03B2;-diversity of the GM in normal pregnancies (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>). Compositional GM changes were also reported during pregnancies, including increased Proteobacteria and decreased Bacteroides as trimesters progressed (<xref ref-type="bibr" rid="B33">Ponzo et al., 2019a</xref>), and this was consistent with our findings. Increased Proteobacteria may reduce glucose homeostasis, insulin resistance and low inflammatory responses in pregnant women (<xref ref-type="bibr" rid="B19">Koren et al., 2012</xref>; <xref ref-type="bibr" rid="B33">Ponzo et al., 2019a</xref>), suggesting an association between gestational changes in GM and health status.</p>
<p>In the current study, we observed that GDM was the most significant contributor to GM dynamics when compared to hypertension, age, diet or other factors; this was in accordance with various reports that indicated disproportionate GM structures in pregnant women with GDM (<xref ref-type="bibr" rid="B17">Karlsson et al., 2013</xref>; <xref ref-type="bibr" rid="B22">Le Chatelier et al., 2013</xref>; <xref ref-type="bibr" rid="B9">Crusell et al., 2018</xref>; <xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>; <xref ref-type="bibr" rid="B46">Wu et al., 2020</xref>; <xref ref-type="bibr" rid="B48">Zheng et al., 2020</xref>; <xref ref-type="bibr" rid="B29">Mokkala et al., 2021</xref>; <xref ref-type="bibr" rid="B1">Abdullah et al., 2022</xref>). Women with GDM tend to exhibit reduced insulin sensitivity and increased inflammation, which are generally related to reduced diversity of GM (<xref ref-type="bibr" rid="B22">Le Chatelier et al., 2013</xref>). Previous studies (<xref ref-type="bibr" rid="B46">Wu et al., 2020</xref>; <xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>; <xref ref-type="bibr" rid="B1">Abdullah et al., 2022</xref>) have also shown a relatively lower tendency for GM &#x03B1;-diversity indices (Ace, Chao, Shannon, and Simpson) in pregnant women with GDM compared to women without GDM. In addition, some studies failed to report any differences in &#x03B1;-diversity between GDM and non-GDM groups in late pregnancy (<xref ref-type="bibr" rid="B9">Crusell et al., 2018</xref>; <xref ref-type="bibr" rid="B48">Zheng et al., 2020</xref>). We speculate that these inconsistent findings were caused by specifically individualized GM, which can be modulated by host genetics and lifestyle (<xref ref-type="bibr" rid="B37">Rothschild et al., 2018</xref>; <xref ref-type="bibr" rid="B35">Redondo-Useros et al., 2020</xref>). Some studies (<xref ref-type="bibr" rid="B2">Barrett et al., 2018</xref>; <xref ref-type="bibr" rid="B33">Ponzo et al., 2019a</xref>) showed that dietary composition during pregnancy was an important factor affecting GM during pregnancy. However, we did not find any significant correlation between nutrient intake and GM in our sdury, and nutritional composition was not the primary factor affecting the dynamic changes of GM; this may be relate to the fact that our participants were all from the same region and had similar dietary structure and habits. In the future, larger-sample and multi-center studies are needed to explore the correlation between dietary intake and GM in Chinese pregnant women and its impact on the dynamic changes inherent to GM.</p>
<p>Our results also implied that there were differences in the composition of and trends in changes between the GDM group and the non-GDM group as the pregnancy progressed; this was in accordance with various reports that indicated inordinate GM structures in pregnant women with GDM (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>; <xref ref-type="bibr" rid="B9">Crusell et al., 2018</xref>; <xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>; <xref ref-type="bibr" rid="B43">Wang et al., 2018</xref>; <xref ref-type="bibr" rid="B8">Cortez et al., 2019</xref>; <xref ref-type="bibr" rid="B34">Ponzo et al., 2019b</xref>; <xref ref-type="bibr" rid="B25">Liu et al., 2020</xref>; <xref ref-type="bibr" rid="B48">Zheng et al., 2020</xref>). Several scientific groups have reported increases in the Firmicutes/Bacteroidetes ratio, <italic>Blautia, Roche, Bilophila</italic>, and <italic>Bifidobacterium</italic> among women with GDM compared to those without GDM (<xref ref-type="bibr" rid="B12">Ferrocino et al., 2018</xref>; <xref ref-type="bibr" rid="B34">Ponzo et al., 2019b</xref>; <xref ref-type="bibr" rid="B48">Zheng et al., 2020</xref>), as well as increases in <italic>Collinsella, Megamonas</italic>, and <italic>Doreas</italic> among GDM women in the P3 (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>; <xref ref-type="bibr" rid="B9">Crusell et al., 2018</xref>; <xref ref-type="bibr" rid="B8">Cortez et al., 2019</xref>). However, the abundances of short-chain fatty acid (SCFA)-producing bacteria, such as <italic>Faecalibacterium, Ruminococcus, Roseburia, Coprococcus, Akkermansia, Phascolarctobacterium</italic>, and <italic>Eubacterium</italic> were reduced (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>; <xref ref-type="bibr" rid="B9">Crusell et al., 2018</xref>; <xref ref-type="bibr" rid="B43">Wang et al., 2018</xref>; <xref ref-type="bibr" rid="B8">Cortez et al., 2019</xref>; <xref ref-type="bibr" rid="B25">Liu et al., 2020</xref>). In the resent study, we noted that the relative abundance of <italic>P.copri</italic> decreased continuously throughout pregnancy in the GDM group; and that <italic>Parabacteroides_distasonis, Lactobacillus_rogosae, Bacteroides_thetaiotaomicron, Bacteroides_uniformis, R.gnavus and B.vulgatus</italic> were enriched from early pregnancy onward. <italic>Firmicutes_bacterium_CAG_83</italic> and <italic>Ruthenibacterium_lactatiformans</italic> were enriched from P2 onward, while <italic>Blautia_obeum</italic> and <italic>Dorea_longicatena</italic> increased in P3. We herein also found that some bacterial species, such as <italic>Akkermansia_muciniphila, Ruminococcus_bicirculans, Roseburia_hominis</italic>, and <italic>Clostridium_leptum</italic> accumulated in women with GDM, while other studies showed diminutions in women with GDM (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>; <xref ref-type="bibr" rid="B25">Liu et al., 2020</xref>; <xref ref-type="bibr" rid="B44">Wang et al., 2020</xref>; <xref ref-type="bibr" rid="B46">Wu et al., 2020</xref>; <xref ref-type="bibr" rid="B47">Xu et al., 2020</xref>). These distinctions emphasize the differential findings with respect to GM dynamics in GDM, and the necessity for the adoption of personalized GM-targeted interventions in different populations.</p>
<p>Other reports further revealed a role for the forementioned GM components in GDM. In a Chinese population-based study (<xref ref-type="bibr" rid="B23">Li et al., 2021</xref>), <italic>R.gnavus</italic> was found to be associated with elevated fasting blood glucose. It was also reported that <italic>R.gnavus</italic> could synthesize and secrete glucorhamnan, a complex polysaccharide with a rhamnose skeleton and glucose side chain, and that it effectively induced dendritic cells to secrete inflammatory cytokines (such as tumor necrosis factor, TNF-&#x03B1;) (<xref ref-type="bibr" rid="B15">Henke et al., 2019</xref>). We recognize that inflammation can impair glucose homeostasis, thereby altering insulin signaling (<xref ref-type="bibr" rid="B28">Mokkala et al., 2017</xref>), and we observed a correlation between GDM group-enriched GM components and the insulin-signaling pathway. For example, <italic>R.gnavus</italic> was found to be enriched in P1 of pregnancy and positively correlated with the insulin-signaling pathway. This finding may support the concept that increased <italic>R.gnavus</italic> in early pregnancy is associated with the development of GDM. In addition, GDM group-enriched <italic>B.vulgatus</italic> (among the microorganisms enriched in early pregnancy) also showed a significant positive correlation with the insulin-signaling pathway.</p>
<p>We identified a marked association between <italic>R. gnavus</italic> and <italic>B. vulgatus</italic> with the biosynthesis of lipopolysaccharide (LPS), an endotoxin that can induce low-grade inflammation and insulin resistance (<xref ref-type="bibr" rid="B36">Rosadini and Kagan, 2017</xref>; <xref ref-type="bibr" rid="B6">Cardona et al., 2018</xref>; <xref ref-type="bibr" rid="B16">Huang et al., 2021</xref>). The LPS contained in Bacteroidetes is a strong activator of Toll-like receptor 4 (TLR4), and the combination of LPS and TLR4 can activate a wide range of cell-signaling pathways, thereby inducing inflammatory responses and the expression and secretion of cytokines (<xref ref-type="bibr" rid="B27">Medzhitov and Horng, 2009</xref>). LPS biosynthesis is also positively correlated with blood glucose at the individual level (<xref ref-type="bibr" rid="B20">Kuang et al., 2017</xref>). In contrast, <italic>P.copri</italic> (which was more abundant in non-GDM women) was significantly negatively correlated with LPS biosynthesis.</p>
<p>Although our study encompasses changes in the GM during the natural course of pregnancy and the chief factors affecting these changes, and provides potential microbial markers for GDM monitoring, there were some limitations. (1) The single-center design is not extrapolable to the situation in different regional populations of China and (2) the small sample size of the present study, which contained only 55 participants, may lead to some bias in the analysis. Therefore, more work is needed in future studies. We posit (1) conducting large multicenter cohort studies to confirm our findings; (2) validating microbial markers for different geographic regions and ethnic groups; and (3) further analyzing the gut microbial functional pathways associated with GDM.</p>
<p>In conclusion, we observed variations in intestinal microecology from P1 to P3 of pregnancy, particular in P3, and noted that GDM was the primary factor affecting the changes in gut microbiota during pregnancy. Moreover, in women with and without GDM, the specific composition of GM varied at different pregnancy periods and associated with the insulin-signaling pathway as well as LPS biosynthesis, suggesting a potential role for GM in GDM development while providing potential GM-targeted prevention of GDM. This study could provide an additional reference for understanding the dynamics of gestational GM in disparate populations.</p>
</sec>
<sec id="S6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The data presented in this study are deposited in the CNGB (<ext-link ext-link-type="uri" xlink:href="https://db.cngb.org/search/project/CNP0003669/">https://db.cngb.org/search/project/CNP0003669/</ext-link>) repository, accession number: <ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="CNP0003669">CNP0003669</ext-link>.</p>
</sec>
<sec id="S7" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The studies involving human participants were reviewed and approved by the Peking University Biomedical Ethics Committee (IR0001052-19150). The patients/participants provided their written informed consent to participate in this study.</p>
</sec>
<sec id="S8" sec-type="author-contributions">
<title>Author contributions</title>
<p>GM managed the project. QZ and LC recruited the participants. ML, CM, and RC performed the sampling and information collection. LZ and QZ performed the bioinformatics analysis and guided the statistic analysis in this work. ML interpreted the analysis results and wrote the manuscript. NZ and GM supervised and polished the manuscript. All authors reviewed the manuscript.</p>
</sec>
</body>
<back>
<sec id="S9" sec-type="funding-information">
<title>Funding</title>
<p>Danone Institute China provide fund for the project (Danone Nutrition Center Food Nutrition Research and Education Fund, No. DIC2019-06), which is an independent non-profit organization (<ext-link ext-link-type="uri" xlink:href="http://www.danone.institute@danone-institute.org.cn">www.danone.institute@danone-institute.org.cn</ext-link>). Danone Institute China does not participate in the design of the study and collection, analysis, and interpretation of data, writing the manuscript and submitting for publication. They do not have ultimate authority over any of these activities.</p>
</sec>
<ack><p>We gratefully thank the co-investigators of the survey for volunteer recruitment and determination of physiological indexes, namely, Shijiazhuang Obstetrics and Gynecology Hospital and the Third Hospital of Hebei Medical University. Furthermore, we would like to express our special thanks to the &#x201C;Fundamental Research Funds for the Central University&#x201D; for supporting this project.</p>
</ack>
<sec id="S10" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="S11" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="S12" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmicb.2023.1114228/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmicb.2023.1114228/full#supplementary-material</ext-link></p>
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<supplementary-material xlink:href="Table_2.xlsx" id="TS2" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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