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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2022.1068540</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Soil microbial abundance was more affected by soil depth than the altitude in peatlands</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname>
<given-names>Meiling</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<xref rid="aff2" ref-type="aff"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1779343/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wang</surname>
<given-names>Ming</given-names>
</name>
<xref rid="aff3" ref-type="aff"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname>
<given-names>Yantong</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<xref rid="aff2" ref-type="aff"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1712815/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Hu</surname>
<given-names>Nanlin</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<xref rid="aff2" ref-type="aff"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Qin</surname>
<given-names>Lei</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<xref rid="aff3" ref-type="aff"><sup>3</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1817534/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ren</surname>
<given-names>Zhibin</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<xref rid="aff3" ref-type="aff"><sup>3</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/833388/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Wang</surname>
<given-names>Guodong</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
<xref rid="aff3" ref-type="aff"><sup>3</sup></xref>
<xref rid="c001" ref-type="corresp"><sup>&#x002A;</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1699039/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Jiang</surname>
<given-names>Ming</given-names>
</name>
<xref rid="aff1" ref-type="aff"><sup>1</sup></xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences</institution>, <addr-line>Changchun</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>College of Resources and Environment, University of Chinese Academy of Sciences</institution>, <addr-line>Beijing</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, Institute for Peat and Mire Research, Northeast Normal University</institution>, <addr-line>Changchun</addr-line>, <country>China</country></aff>
<author-notes>
<fn id="fn0001" fn-type="edited-by"><p>Edited by: Zifang Chi, Jilin University, China</p></fn>
<fn id="fn0002" fn-type="edited-by"><p>Reviewed by: Feng Li, Institute of Subtropical Agriculture (CAS), China; Xi Min, Qingdao University, China</p></fn>
<corresp id="c001">&#x002A;Correspondence: Guodong Wang, <email>wanggd@iga.ac.cn</email></corresp>
<fn id="fn0003" fn-type="other"><p>This article was submitted to Microbiological Chemistry and Geomicrobiology, a section of the journal Frontiers in Microbiology</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>09</day>
<month>11</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>13</volume>
<elocation-id>1068540</elocation-id>
<history>
<date date-type="received">
<day>13</day>
<month>10</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>25</day>
<month>10</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2022 Zhao, Wang, Zhao, Hu, Qin, Ren, Wang and Jiang.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Zhao, Wang, Zhao, Hu, Qin, Ren, Wang and Jiang</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Soil microbial abundance is a key factor to predict soil organic carbon dynamics in peatlands. However, little is known about the effects of altitude and soil depth and their interaction on soil microbial abundance in peatlands. In this study, we measured the microbial abundance and soil physicochemical properties at different soil depths (0&#x2013;30&#x2009;cm) in peatlands along an altitudinal gradient (from 200 to 1,500&#x2009;m) on Changbai Mountain, China. The effect of soil depth on soil microbial abundance was stronger than the altitude. The total microbial abundance and different microbial groups showed the same trend along the soil depth and altitudinal gradients, respectively. Microbial abundance in soil layer of 5&#x2013;10&#x2009;cm was the highest and then decreased with soil depth; microbial abundance at the altitude of 500&#x2013;800&#x2009;m was the highest. Abiotic and biotic factors together drove the change in microbial abundance. Physical variables (soil water content and pH) and microbial co-occurrence network had negative effects on microbial abundance, and nutrient variables (total nitrogen and total phosphorus) had positive effects on microbial abundance. Our results demonstrated that soil depth had more effects on peatland microbial abundance than altitude. Soil environmental change with peat depth may lead to the microorganisms receiving more disturbances in future climate change.</p>
</abstract>
<kwd-group>
<kwd>microbial abundance</kwd>
<kwd>altitudinal gradient</kwd>
<kwd>depth gradient</kwd>
<kwd>peatland carbon dynamics</kwd>
<kwd>co-occurrence network</kwd>
</kwd-group>
<contract-num rid="cn1">42077070</contract-num>
<contract-num rid="cn1">41877075</contract-num>
<contract-num rid="cn1">41871081</contract-num>
<contract-num rid="cn1">U19A2042</contract-num>
<contract-num rid="cn2">XDA28080300</contract-num>
<contract-num rid="cn3">ANSO-PA-2020-14</contract-num>
<contract-num rid="cn4">2019234</contract-num>
<contract-num rid="cn4">2020237</contract-num>
<contract-sponsor id="cn1">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content>
</contract-sponsor>
<contract-sponsor id="cn2">Strategic Priority Research Program of the Chinese Academy of Sciences</contract-sponsor>
<contract-sponsor id="cn3">Professional Association of the Alliance of International Science Organizations</contract-sponsor>
<contract-sponsor id="cn4">Youth Innovation Promotion Association CAS<named-content content-type="fundref-id">10.13039/501100004739</named-content>
</contract-sponsor>
<counts>
<fig-count count="5"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="51"/>
<page-count count="10"/>
<word-count count="5379"/>
</counts>
</article-meta>
</front>
<body>
<sec id="sec1" sec-type="intro">
<title>Introduction</title>
<p>Soil microorganisms are a vital part of peatland ecosystems and play a critical role as a &#x201C;carbon pump&#x201D; in the process of organic matter decomposition (<xref ref-type="bibr" rid="ref24">Liang et al., 2020</xref>; <xref ref-type="bibr" rid="ref22">Li J. et al., 2022</xref>). Ecologists have tried to comprehend the patterns of soil microbial communities along the environmental gradient. With the increasing awareness of the significance of microbial participation in the carbon cycle process and the development of biomarker technology, the pattern of soil microorganisms along the altitudinal and depth gradients has attracted scholars&#x2019; attention (<xref ref-type="bibr" rid="ref38">Wang et al., 2019</xref>; <xref ref-type="bibr" rid="ref25">Looby and Martin, 2020</xref>). However, existing research so far have not reached the same conclusion. Some studies indicated that the altitude had a stronger impact on the community composition of microbes than soil depth (<xref ref-type="bibr" rid="ref22">Li J. et al., 2022</xref>), while other studies suggested that soil microbial community activity and composition was more depended on soil depth (<xref ref-type="bibr" rid="ref10">Dove et al., 2021</xref>; <xref ref-type="bibr" rid="ref19">Lamit et al., 2021</xref>; <xref ref-type="bibr" rid="ref51">Zhao H. et al., 2021</xref>). Moreover, several studies demonstrated the complex interaction between altitude and depth had significantly influenced soil microbial abundance and their ratios (<xref ref-type="bibr" rid="ref44">Xu et al., 2022</xref>). These examples suggest the ongoing debate on the pattern of microbial abundance and communities along the altitudinal and depth gradients. The reason is that these studies focus on different ecosystems or vegetation zones, little is known about the pattern within one ecosystem.</p>
<p>Environmental conditions could affect the distribution of microorganisms in peatlands. For example, soil pH, soil water condition, and dissolved organic carbon (DOC) were found to be major factors influencing the biogeographic patterns of microorganisms (<xref ref-type="bibr" rid="ref33">Rousk et al., 2010</xref>; <xref ref-type="bibr" rid="ref37">Wagner et al., 2015</xref>; <xref ref-type="bibr" rid="ref39">Wang et al., 2021</xref>), and soil nutrients including total nitrogen and total phosphorus significantly affected soil microbial abundance (<xref ref-type="bibr" rid="ref13">Fenner and Freeman, 2011</xref>). However, the importance of the internal interaction of microorganisms in regulating the microbial abundance has been ignored. In fact, biotic variables (e.g., microbial co-occurrence network) are also supposed to be an important factor influencing the spatial pattern of soil microorganisms (<xref ref-type="bibr" rid="ref11">Fan et al., 2017</xref>). The symbiosis, predation, and competition relationships between soil microorganisms formed a complex microbial ecological interaction network (<xref ref-type="bibr" rid="ref12">Faust and Raes, 2012</xref>). The co-occurrence network has been widely used in forest, farmland and other ecosystems to evaluate microbial interactions (<xref ref-type="bibr" rid="ref11">Fan et al., 2017</xref>; <xref ref-type="bibr" rid="ref35">Tu et al., 2020</xref>; <xref ref-type="bibr" rid="ref43">Xie et al., 2020</xref>). However, there are limited data about the living microbial lipid co-occurrence network along the altitudinal and depth gradients in peatlands.</p>
<p>The Changbai Mountain in northeastern China are exceedingly vulnerable to climate change, and the peatlands are widely distributed in this region (<xref ref-type="bibr" rid="ref40">Wang et al., 2018</xref>; <xref ref-type="bibr" rid="ref50">Zhao M. L. et al., 2021</xref>), which provides an ideal place to study the pattern in microbial abundance along the altitudinal and depth gradients. In the present study, we set four altitudinal gradients and six depth gradients in peatlands in the Changbai Mountain to understand the change in microbial abundance and their responses to abiotic and biotic factors along the altitudinal and depth gradients.</p>
</sec>
<sec id="sec2" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="sec3">
<title>Study area</title>
<p>The Changbai Mountain is located in Jilin Province, northeastern China (<xref ref-type="bibr" rid="ref49">Zhao et al., 2022</xref>). The peatlands in the Changbai Mountain are dominated by sedges (<xref ref-type="bibr" rid="ref2">Bao et al., 2010</xref>; <xref ref-type="bibr" rid="ref40">Wang et al., 2018</xref>). The climate in this region is a typical continental monsoon climate; the mean annual temperature (MAT) in the study area ranges from &#x2212;0.2&#x00B0;C to 3.9&#x00B0;C, and the mean annual precipitation (MAP) ranges from 580 to 770&#x2009;mm in the study area (<xref ref-type="bibr" rid="ref49">Zhao et al., 2022</xref>).</p>
</sec>
<sec id="sec4">
<title>Sample collection</title>
<p>Samples were collected in July 2020. Soil cores at 0&#x2013;30&#x2009;cm depth with an interval of 5&#x2009;cm were collected in four altitude gradients (200&#x2013;500, 500&#x2013;800, 800&#x2013;1,200 and 1,200&#x2013;1,500&#x2009;m; <xref rid="fig1" ref-type="fig">Figure 1</xref>). Two peat samples were collected in each altitudinal gradient. Peat samples were kept at &#x2212;20&#x00B0;C immediately after collection. Each sample was separated into two subsamples. One was used for the measurement of soil water content (SWC), and the other was freeze-dried and sieved for the measurement of extracted microbial lipids and soil physicochemical properties.</p>
<fig position="float" id="fig1">
<label>Figure 1</label>
<caption>
<p>Site locations of the sedge peatlands along an altitudinal gradient on Changbai Mountain, China.</p>
</caption>
<graphic xlink:href="fmicb-13-1068540-g001.tif"/>
</fig>
</sec>
<sec id="sec5">
<title>Phospholipid fatty acids analysis</title>
<p>The analysis of microbial abundance was used by phospholipid fatty acids (PLFAs) technology. The extraction and separation of PLFAs were performed followed the Bligh Dyer method (<xref ref-type="bibr" rid="ref5">Bligh and Dyer, 1959</xref>). The sample test method was described by <xref ref-type="bibr" rid="ref50">Zhao M. L. et al. (2021)</xref>. The detected compounds were identified in the MIDI library (MIDI, Inc., Newark, United States) (<xref ref-type="bibr" rid="ref48">Zhang et al., 2019</xref>). The PLFAs were used as the microbial biomarkers according to <xref ref-type="bibr" rid="ref18">Joergensen (2021)</xref>. The gram-positive bacteria (G+) were the sum of the abundances of Firmicutes and Actinobacteria, the G+ and gram-negative bacteria (G-) belong to bacteria (B). The total microbial abundance was the sum of the abundances of bacteria, fungi (F) and unspecific microbial biomarkers.</p>
</sec>
<sec id="sec6">
<title>Soil physicochemical property measurement</title>
<p>Soil water content (SWC) was measured by the gravimetric method. Soil pH was measured by a potentiometric test with a soil to water ratio of 1:10. The total organic carbon (TOC) and dissolved organic carbon (DOC) were detected on a TOC analyzer (Shimazu, Japan). The total phosphorus (TP) and total nitrogen (TN) were determined by an automated analyzer (Smartchem140, AMS-Alliance, and French; <xref ref-type="bibr" rid="ref26">Lu, 2000</xref>).</p>
</sec>
<sec id="sec7">
<title>Microbial co-occurrence network analysis</title>
<p>Co-occurrence network was used to show microbial biomarker interactions, the analysis was visualized using Gephi v.0.9.1. Each node means one microbial lipid and each edge means a strong relationship between two nodes. The topology of the co-occurrence networks was assessed referred to previous studies (<xref ref-type="bibr" rid="ref35">Tu et al., 2020</xref>; <xref ref-type="bibr" rid="ref22">Li J. et al., 2022</xref>). Briefly, average degree indicates the complexity of the co-occurrence network. Average path length indicates the distance between any two members of the co-occurrence network. A higher average degree indicates a higher complexity of the network, a shorter average path length suggests a stronger correlation between members.</p>
</sec>
<sec id="sec8">
<title>Data analysis</title>
<p>Two-way ANOVAs were used to examine the main effect of altitude and soil depth and their interaction on peat physicochemical properties and soil microbial abundance. Redundancy analysis (RDA) was conducted to analyze the relationship of microbial abundance to peat physicochemical properties. Variation decomposition analysis (VDA) was used to analyze the effects of peat physicochemical properties and microbial co-occurrence networks on soil total microbial abundance. The physical (pH and SWC) and nutrient (DOC, TN, TOC, and TP) variables were used as abiotic factors and the microbial ecological interaction network was used as the biotic factor in the prediction model. Based on previous studies, the microbial co-occurrence networks are represented by the first two axes&#x2019; scores of the principal component analysis for microbial community composition (<xref ref-type="bibr" rid="ref32">Purahong et al., 2016</xref>). A positive coefficient of VDA indicates a positive effect on the prediction of the total microbial abundance, and a negative coefficient suggests the opposite (<xref ref-type="bibr" rid="ref14">Gross et al., 2017</xref>). The data were log<sub>10</sub>-transformed to conform to normality and homogeneity of variance. The analyses were performed using SPSS 21.0, Canoco 5.0, Origin 29.0, and R 4.1.1 with the packages vegan (<xref ref-type="bibr" rid="ref31">Oksanen et al., 2020</xref>), MuMIn (<xref ref-type="bibr" rid="ref3">Barto&#x0144;, 2022</xref>), performance (<xref ref-type="bibr" rid="ref28">L&#x00FC;decke et al., 2021</xref>), ggplot2 (<xref ref-type="bibr" rid="ref41">Wickham, 2016</xref>), and ggh4x (<xref ref-type="bibr" rid="ref36">van den Brand, 2021</xref>).</p>
</sec>
</sec>
<sec id="sec9" sec-type="results">
<title>Results</title>
<sec id="sec10">
<title>Soil microbial abundance changes with depth and altitude</title>
<p>Soil depth and altitude significantly affected the total microbial abundance (<xref rid="tab1" ref-type="table">Table 1</xref>). The effect of soil depth on the abundance of the microbial group was stronger than the altitude (<xref rid="tab1" ref-type="table">Table 1</xref>). The soil layer of 5&#x2013;10&#x2009;cm had the highest total microbial concentration, which then decreased with soil depth (<xref rid="fig2" ref-type="fig">Figure 2A</xref>). The concentration of total microbial PLFAs was higher at 500&#x2013;800&#x2009;m than at other altitudes (<xref rid="fig2" ref-type="fig">Figure 2B</xref>). The concentrations of G+, G&#x2212;, and F showed a similar trend with the total microbial concentration (<xref rid="fig2" ref-type="fig">Figure 2</xref>).</p>
<table-wrap position="float" id="tab1">
<label>Table 1</label>
<caption>
<p>A summary of analysis of variance (ANOVA) on the effects of altitude and soil depth for soil physicochemical properties and microbial groups.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top" rowspan="2">Variable</th>
<th align="center" valign="top" colspan="2">Altitude</th>
<th align="center" valign="top" colspan="2">Depth</th>
<th align="center" valign="top" colspan="2">Altitude&#x2009;&#x00D7;&#x2009;depth</th>
</tr>
<tr>
<th align="center" valign="top"><italic>f</italic> value</th>
<th align="center" valign="top">Value of <italic>p</italic></th>
<th align="center" valign="top"><italic>f</italic> value</th>
<th align="center" valign="top">Value of <italic>p</italic></th>
<th align="center" valign="top"><italic>f</italic> value</th>
<th align="center" valign="top">Value of <italic>p</italic></th>
</tr>
</thead>
<tbody>
<tr>
<td align="char" valign="top" char=".">SWC</td>
<td align="char" valign="top" char=".">4.04</td>
<td align="char" valign="top" char=".">0.019&#x002A;</td>
<td align="char" valign="top" char=".">1.702</td>
<td align="char" valign="top" char=".">0.173</td>
<td align="char" valign="top" char=".">0.776</td>
<td align="char" valign="top" char=".">0.690</td>
</tr>
<tr>
<td align="char" valign="top" char=".">TOC</td>
<td align="char" valign="top" char=".">2.03</td>
<td align="char" valign="top" char=".">0.136</td>
<td align="char" valign="top" char=".">1.813</td>
<td align="char" valign="top" char=".">0.148</td>
<td align="char" valign="top" char=".">0.622</td>
<td align="char" valign="top" char=".">0.828</td>
</tr>
<tr>
<td align="char" valign="top" char=".">DOC</td>
<td align="char" valign="top" char=".">2.759</td>
<td align="char" valign="top" char=".">0.064</td>
<td align="char" valign="top" char=".">40.149</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.181</td>
<td align="char" valign="top" char=".">0.348</td>
</tr>
<tr>
<td align="char" valign="top" char=".">TN</td>
<td align="char" valign="top" char=".">1.22</td>
<td align="char" valign="top" char=".">0.324</td>
<td align="char" valign="top" char=".">68.85</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.376</td>
<td align="char" valign="top" char=".">0.236</td>
</tr>
<tr>
<td align="char" valign="top" char=".">TP</td>
<td align="char" valign="top" char=".">1.043</td>
<td align="char" valign="top" char=".">0.391</td>
<td align="char" valign="top" char=".">0.676</td>
<td align="char" valign="top" char=".">0.646</td>
<td align="char" valign="top" char=".">0.824</td>
<td align="char" valign="top" char=".">0.644</td>
</tr>
<tr>
<td align="char" valign="top" char=".">pH</td>
<td align="char" valign="top" char=".">0.829</td>
<td align="char" valign="top" char=".">0.491</td>
<td align="char" valign="top" char=".">5.84</td>
<td align="char" valign="top" char=".">0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.039</td>
<td align="char" valign="top" char=".">0.454</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Firmicutes</td>
<td align="char" valign="top" char=".">5.731</td>
<td align="char" valign="top" char=".">0.004&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">17.948</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.739</td>
<td align="char" valign="top" char=".">0.110</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Actinobacteria</td>
<td align="char" valign="top" char=".">5.428</td>
<td align="char" valign="top" char=".">0.005&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">12.255</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">0.871</td>
<td align="char" valign="top" char=".">0.601</td>
</tr>
<tr>
<td align="char" valign="top" char=".">G+ bacteria</td>
<td align="char" valign="top" char=".">6.273</td>
<td align="char" valign="top" char=".">0.003&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">18.868</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.418</td>
<td align="char" valign="top" char=".">0.216</td>
</tr>
<tr>
<td align="char" valign="top" char=".">G&#x2212; bacteria</td>
<td align="char" valign="top" char=".">11.777</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">10.928</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">0.663</td>
<td align="char" valign="top" char=".">0.793</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Fungi</td>
<td align="char" valign="top" char=".">4.29</td>
<td align="char" valign="top" char=".">0.015&#x002A;</td>
<td align="char" valign="top" char=".">5.696</td>
<td align="char" valign="top" char=".">0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">0.700</td>
<td align="char" valign="top" char=".">0.761</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Bacteria</td>
<td align="char" valign="top" char=".">11.648</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">19.048</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.024</td>
<td align="char" valign="top" char=".">0.466</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Unspecific</td>
<td align="char" valign="top" char=".">2.427</td>
<td align="char" valign="top" char=".">0.09</td>
<td align="char" valign="top" char=".">10.681</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">1.011</td>
<td align="char" valign="top" char=".">0.477</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Total</td>
<td align="char" valign="top" char=".">9.442</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">19.526</td>
<td align="char" valign="top" char=".">&#x003C;0.001&#x002A;&#x002A;</td>
<td align="char" valign="top" char=".">0.967</td>
<td align="char" valign="top" char=".">0.514</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>f</italic> value is the value of <italic>F</italic>-test, &#x002A;Difference was significant at <italic>p</italic>&#x2009;&#x003C;&#x2009;0.05, &#x002A;&#x002A;Difference was significant at <italic>p</italic>&#x2009;&#x003C;&#x2009;0.01. SWC, soil water content; TOC, soil total organic carbon; DOC, dissolved organic carbon; TN, total nitrogen; TP, total phosphorus.</p>
</table-wrap-foot>
</table-wrap>
<fig position="float" id="fig2">
<label>Figure 2</label>
<caption>
<p>Concentration of various microbial groups based on the phospholipid fatty acids along the depth <bold>(A)</bold> and altitudinal <bold>(B)</bold> gradient on Changbai Mountain, China. Values were shown as Means&#x2009;&#x00B1;&#x2009;SE. Different letters suggest significant differences among study sites based on one-way ANOVA and Tukey&#x2019;s test (<italic>p</italic>&#x2009;&#x003C;&#x2009;0.05). TPLFAs: total phospholipid fatty acids abundance; G+: gram-positive bacteria; G&#x2212;: gram-negative bacteria; F: fungi; B: bacteria.</p>
</caption>
<graphic xlink:href="fmicb-13-1068540-g002.tif"/>
</fig>
</sec>
<sec id="sec11">
<title>Soil properties and co-occurrence network change with depth and altitude</title>
<p>Soil depth significantly affected DOC, TN, and pH (<xref rid="tab1" ref-type="table">Table 1</xref>). As soil depth increased, DOC decreased and TN generally increased. No significant difference was found in SWC, TOC, and TP between different depths. Altitude significantly affected SWC (<xref rid="tab1" ref-type="table">Table 1</xref>). SWC generally increased with the altitude. No significant difference was found in soil pH, TN, TP, and TOC along the altitudinal gradient.</p>
<p>Microbial co-occurrence network did not show significant differences along the altitudinal gradient (<xref rid="fig3" ref-type="fig">Figure 3A</xref>), but it had significant differences between soil depths (<xref rid="fig3" ref-type="fig">Figure 3B</xref>). As soil depth increased, the negative interaction ratio and average path length of co-occurrence networks decreased, and the positive interaction ratio, average degree, average clustering coefficients, and graph density of co-occurrence networks gradually increased (<xref rid="tab2" ref-type="table">Table 2</xref>; <xref rid="fig3" ref-type="fig">Figure 3B</xref>).</p>
<fig position="float" id="fig3">
<label>Figure 3</label>
<caption>
<p>Microbial co-occurrence networks along the altitudinal <bold>(A)</bold> and depth <bold>(B)</bold> gradient on Changbai Mountain, China. The networks of co-occurring microbial biomarkers were determined based on Pearson correlation analysis. The node suggests the individual microbial biomarker based on the phospholipid fatty acid. The co-occurrence network nodes are colored by microbial groups. Blue edges indicate negative relationships between two individual nodes, while red edges suggest positive relationships. A connection stands for a strong correlation coefficient (<italic>r</italic>) &#x003E;0.5. Each depth network was constructed from eight samples. Each altitudinal network was constructed from 12 samples.</p>
</caption>
<graphic xlink:href="fmicb-13-1068540-g003.tif"/>
</fig>
<table-wrap position="float" id="tab2">
<label>Table 2</label>
<caption>
<p>Topological parameters of network analysis in different altitudes and soil depths.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top" rowspan="2">Network attributes</th>
<th align="center" valign="top" colspan="4">Altitude (m)</th>
<th align="center" valign="top" colspan="6">Soil depth (cm)</th>
</tr>
<tr>
<th align="center" valign="top">200&#x2013;500</th>
<th align="center" valign="top">500&#x2013;800</th>
<th align="center" valign="top">800&#x2013;1,200</th>
<th align="center" valign="top">1,200&#x2013;1,500</th>
<th align="center" valign="top">0&#x2013;5</th>
<th align="center" valign="top">5&#x2013;10</th>
<th align="center" valign="top">10&#x2013;15</th>
<th align="center" valign="top">15&#x2013;20</th>
<th align="center" valign="top">20&#x2013;25</th>
<th align="center" valign="top">25&#x2013;30</th>
</tr>
</thead>
<tbody>
<tr>
<td align="char" valign="top" char=".">Nodes</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">26</td>
<td align="center" valign="top">26</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">27</td>
<td align="center" valign="top">27</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Edges</td>
<td align="center" valign="top">267</td>
<td align="center" valign="top">204</td>
<td align="center" valign="top">200</td>
<td align="center" valign="top">240</td>
<td align="center" valign="top">124</td>
<td align="center" valign="top">116</td>
<td align="center" valign="top">168</td>
<td align="center" valign="top">212</td>
<td align="center" valign="top">250</td>
<td align="center" valign="top">252</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Interaction positives</td>
<td align="center" valign="top">100%</td>
<td align="center" valign="top">96.08%</td>
<td align="center" valign="top">95.5%</td>
<td align="center" valign="top">98.75%</td>
<td align="center" valign="top">79.03%</td>
<td align="center" valign="top">73.27%</td>
<td align="center" valign="top">98.21%</td>
<td align="center" valign="top">94.34%</td>
<td align="center" valign="top">95.2%</td>
<td align="center" valign="top">93.65%</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Interaction negatives</td>
<td align="center" valign="top">0%</td>
<td align="center" valign="top">3.92%</td>
<td align="center" valign="top">4.5%</td>
<td align="center" valign="top">1.25%</td>
<td align="center" valign="top">20.97%</td>
<td align="center" valign="top">26.73%</td>
<td align="center" valign="top">1.79%</td>
<td align="center" valign="top">5.66%</td>
<td align="center" valign="top">4.8%</td>
<td align="center" valign="top">6.35%</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Average degree</td>
<td align="center" valign="top">9.889</td>
<td align="center" valign="top">7.556</td>
<td align="center" valign="top">7.407</td>
<td align="center" valign="top">8.889</td>
<td align="center" valign="top">4.769</td>
<td align="center" valign="top">4.462</td>
<td align="center" valign="top">6.222</td>
<td align="center" valign="top">7.852</td>
<td align="center" valign="top">9.259</td>
<td align="center" valign="top">9.333</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Modularity</td>
<td align="center" valign="top">0.073</td>
<td align="center" valign="top">0.104</td>
<td align="center" valign="top">0.164</td>
<td align="center" valign="top">0.111</td>
<td align="center" valign="top">0.293</td>
<td align="center" valign="top">0.264</td>
<td align="center" valign="top">0.186</td>
<td align="center" valign="top">0.088</td>
<td align="center" valign="top">0.072</td>
<td align="center" valign="top">0.046</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Graph density</td>
<td align="center" valign="top">0.38</td>
<td align="center" valign="top">0.291</td>
<td align="center" valign="top">0.285</td>
<td align="center" valign="top">0.342</td>
<td align="center" valign="top">0.191</td>
<td align="center" valign="top">0.178</td>
<td align="center" valign="top">0.239</td>
<td align="center" valign="top">0.302</td>
<td align="center" valign="top">0.356</td>
<td align="center" valign="top">0.359</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Average clustering coefficient</td>
<td align="center" valign="top">0.442</td>
<td align="center" valign="top">0.368</td>
<td align="center" valign="top">0.352</td>
<td align="center" valign="top">0.411</td>
<td align="center" valign="top">0.296</td>
<td align="center" valign="top">0.250</td>
<td align="center" valign="top">0.338</td>
<td align="center" valign="top">0.389</td>
<td align="center" valign="top">0.418</td>
<td align="center" valign="top">0.437</td>
</tr>
<tr>
<td align="char" valign="top" char=".">Average path length</td>
<td align="center" valign="top">1.207</td>
<td align="center" valign="top">1.336</td>
<td align="center" valign="top">1.305</td>
<td align="center" valign="top">1.328</td>
<td align="center" valign="top">1.542</td>
<td align="center" valign="top">1.652</td>
<td align="center" valign="top">1.48</td>
<td align="center" valign="top">1.394</td>
<td align="center" valign="top">1.213</td>
<td align="center" valign="top">1.204</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="sec12">
<title>Relationship between the microbial abundance and biotic and abiotic factors</title>
<p>The RDA analysis found that the first and second axes together explained over 60.0% of the total variation in microbial groups (<xref rid="fig4" ref-type="fig">Figure 4</xref>). Soil pH, TN, DOC, and depth were the main factors that significantly affected the microbial abundance. Samples from the top soil layers were located in the lower quadrant of the RDA graph while samples from deeper soil layers were located in the upper quadrant (<xref rid="fig4" ref-type="fig">Figure 4</xref>).</p>
<fig position="float" id="fig4">
<label>Figure 4</label>
<caption>
<p>Redundancy analysis (RDA) ordination plot of the concentration of microbial groups constrained by the altitude, soil depth, and physicochemical properties. DOC, dissolved organic carbon; TOC, soil total organic carbon; TP, total phosphorus; TN, total nitrogen; SWC, soil water content.</p>
</caption>
<graphic xlink:href="fmicb-13-1068540-g004.tif"/>
</fig>
<p>The VDA analysis showed that the total microbial abundance was significantly affected by both abiotic and biotic factors. Soil nutrients including DOC and TN had a positive correlation with the total microbial abundance. Soil physical properties (pH and SWC) and the microbial interaction network had a negative relationship with the total microbial abundance (<xref rid="fig5" ref-type="fig">Figure 5</xref>).</p>
<fig position="float" id="fig5">
<label>Figure 5</label>
<caption>
<p>Effect of abiotic and biotic factors on total microbial abundance. Average parameter estimates (standardized regression coefficients) of model predictors, associated 95% confidence intervals, and relative importance of each factor, expressed as the percentage of explained variance. The adjusted (adj.) <italic>R</italic><sup>2</sup> of the averaged model and the <italic>p</italic>-value of each predictor were given as: &#x002A;<italic>p</italic>&#x2009;&#x003C;&#x2009;0.05; &#x002A;&#x002A;<italic>p</italic>&#x2009;&#x003C;&#x2009;0.01; &#x002A;&#x002A;&#x002A;<italic>p</italic>&#x2009;&#x003C;&#x2009;0.001. TOC, soil total organic carbon; DOC, dissolved organic carbon; TN, total nitrogen; TP, total phosphorus; SWC, soil water content. PC1 and PC2, the first and two axes&#x2019; scores of the principal component analysis for microbial community composition.</p>
</caption>
<graphic xlink:href="fmicb-13-1068540-g005.tif"/>
</fig>
</sec>
</sec>
<sec id="sec13" sec-type="discussions">
<title>Discussion</title>
<sec id="sec14">
<title>Soil physicochemical properties differed between depths and significantly affected microbial abundance in peatlands</title>
<p>Soil depth has a great impact on soil microbes because of the unequal distribution of plant roots and soil nutrients across soil profiles (<xref ref-type="bibr" rid="ref33">Rousk et al., 2010</xref>). Soil nutrients and physical environments were the main factors affecting the total microbial abundance in peatlands. Soil nutrients provided energy for the growth, metabolism, and reproduction of microorganisms (<xref ref-type="bibr" rid="ref47">Zhang et al., 2022</xref>). In our study, soil depth significantly affected soil physicochemical properties and microbial abundance in peatlands. Soil nutrients had a positive influence on the soil microorganisms and soil physical factors had a negative impact on the abundance of soil microbes (<xref rid="fig5" ref-type="fig">Figure 5</xref>).</p>
<p>Soil nutrient is a key factor affecting microbial abundance in peatlands. DOC can be used as a carbon substrate for soil microbes, and TN can alleviate carbon limitation on soil microorganisms (<xref ref-type="bibr" rid="ref15">Guo et al., 2011</xref>; <xref ref-type="bibr" rid="ref52">Zhou et al., 2017</xref>). In our study, DOC and TN differed significantly between soil depths, and they significantly affected the total microbial abundance (<xref rid="tab1" ref-type="table">Table 1</xref>; <xref rid="fig5" ref-type="fig">Figure 5</xref>). This result was consistent with former research (<xref ref-type="bibr" rid="ref6">Bradley et al., 2006</xref>; <xref ref-type="bibr" rid="ref17">Jia et al., 2020</xref>; <xref ref-type="bibr" rid="ref50">Zhao M. L. et al., 2021</xref>). DOC is the most active intermediate in carbon cycle process because of its high mobility and bioavailability (<xref ref-type="bibr" rid="ref30">Marschner and Kalbitz, 2003</xref>). DOC is utilized as a substrate, leading to microbial mineralization and CO<sub>2</sub> emissions in peatlands (<xref ref-type="bibr" rid="ref4">Battin et al., 2008</xref>; <xref ref-type="bibr" rid="ref47">Zhang et al., 2022</xref>). Nitrogen accumulation increases microbial abundance because it increases the utilization rate of nitrogen resources, which can alleviate carbon limitation on soil microorganisms or inhibit the limitation of carbon caused by soil acidification (<xref ref-type="bibr" rid="ref15">Guo et al., 2011</xref>; <xref ref-type="bibr" rid="ref52">Zhou et al., 2017</xref>). This finding indicated that nitrogen accumulation had a positive effect on microbial abundance. The terrestrial surface temperature is projected to exceed 2&#x00B0;C by the end of this century, and the atmospheric nitrogen deposition and the intensity of extreme precipitation events will increase (<xref ref-type="bibr" rid="ref16">IPCC, 2022</xref>). These changes may lead to more DOC exports from the peatlands (<xref ref-type="bibr" rid="ref8">Cole et al., 2002</xref>; <xref ref-type="bibr" rid="ref7">Clark et al., 2010</xref>) and an increasing nitrogen accumulation in peatlands (<xref ref-type="bibr" rid="ref46">Zhang et al., 2018</xref>, <xref ref-type="bibr" rid="ref47">2022</xref>). Our findings suggest that DOC and TN positively affect soil microbial abundance and microbial activities, which may lead to higher CO<sub>2</sub> emissions in peatlands.</p>
<p>Soil physical properties also affect soil microbial abundance. Soil pH changed cell membrane charge and thus influenced the nutrient absorption by soil microorganisms and the enzyme activity in metabolic processes (<xref ref-type="bibr" rid="ref33">Rousk et al., 2010</xref>). The acidic environment in peatlands is conducive to the growth of microorganism, and the microbial abundance generally decreased as soil pH increased in our study, which is consistent with former research (<xref ref-type="bibr" rid="ref1">Anderson et al., 2010</xref>). Water regime could also affect soil microbial abundance. The effects of water drainage on soil microbial community and enzyme activity were dependent on soil depth in peatlands (<xref ref-type="bibr" rid="ref45">Xu et al., 2021</xref>). When SWC was high, soil microbial abundance decreased because microbial heterotrophic respiration of microorganisms was inhibited (<xref ref-type="bibr" rid="ref37">Wagner et al., 2015</xref>).</p>
</sec>
<sec id="sec15">
<title>The complexity of the co-occurrence network increased with soil depths and affected microbial abundance in peatlands</title>
<p>The complexity of the co-occurrence network indicated microbial interactions along the environmental gradient (<xref ref-type="bibr" rid="ref29">Ma et al., 2020</xref>). Environmental variables are essential for microbial niche differentiation, which enables distinct microbial groups to obtain adequate substrate and survive under various environmental conditions (<xref ref-type="bibr" rid="ref42">Wiens et al., 2010</xref>; <xref ref-type="bibr" rid="ref21">Li et al., 2020</xref>). The wide range of edaphic environments has driven the assembly process of soil microorganism (<xref ref-type="bibr" rid="ref9">Dini-Andreote et al., 2015</xref>; <xref ref-type="bibr" rid="ref34">Tripathi et al., 2018</xref>). In our study, the complexity of microbial co-occurrence networks increased and the microbial abundance decreased with soil depth (<xref rid="tab2" ref-type="table">Table 2</xref>), and the VDA analysis indicated that microbial community assembly was one major factor affecting microbial abundance (<xref rid="fig5" ref-type="fig">Figure 5</xref>). The availability of carbon, energy and oxygen decreased with soil depth in peatlands, the competition of microorganisms for the resource increased, and their interactions increased. Resource limitation leads to the reduction of microbial abundance (<xref ref-type="bibr" rid="ref27">Lu et al., 2020</xref>). Our results are consistent with a recent study which found the depth effect on bacterial community assembly processes in paddy soils (<xref ref-type="bibr" rid="ref20">Li W. T. et al., 2022</xref>).</p>
</sec>
</sec>
<sec id="sec16" sec-type="conclusions">
<title>Conclusion</title>
<p>We explored the change in microbial abundance in peatlands along the depth and altitudinal gradients on Changbai Mountain, China. Soil microbial abundance was more affected by soil depth than the altitude. The microbial abundance at 5&#x2013;10&#x2009;cm was higher than that at depth of 0&#x2013;5&#x2009;cm and 10&#x2013;30&#x2009;cm. The microbial abundance at 500&#x2013;800&#x2009;m was higher than that at altitude of 200&#x2013;500&#x2009;m and 800&#x2013;1,500&#x2009;m. The change in total microbial abundance was driven by both soil physiochemical properties and microbial co-occurrence network. Our study provides a new insight into the significance of microbial participation in peatland carbon cycling along the environmental gradient. It is important to consider the depth effects on soil microbial abundance when assess the peatland carbon dynamic under climate change.</p>
</sec>
<sec id="sec17" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="sec18">
<title>Author contributions</title>
<p>MZ, MW, and GW designed the study. MZ, MW, YZ, NH, LQ, ZR, and MJ performed the field investigation and collected the data. MZ and GW conducted the statistical analysis and wrote the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="sec19" sec-type="funding-information">
<title>Funding</title>
<p>This study was supported by the National Natural Science Foundation of China (42077070, 41877075, 41871081, and U19A2042), the Strategic Priority Research Program of the Chinese Academy of Sciences (XDA28080300), the Professional Association of the Alliance of International Science Organizations (ANSO-PA-2020-14), and the Youth Innovation Promotion Association CAS (2019234 and 2020237).</p>
</sec>
<sec id="conf1" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
<p>The reviewer FL declared a shared affiliation with the authors MZ, YZ, NH, LQ, ZR, GW, and MJ to the handling editor at the time of review.</p>
</sec>
<sec id="sec100" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<ref-list>
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