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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2025.1489965</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Systematic Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>A systematic review of fishing impacts on the trophic level of fish populations and assemblages in the Mediterranean Sea</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Marguin</surname>
<given-names>Audrey</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2782137/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/data-curation/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
<role content-type="https://credit.niso.org/contributor-roles/methodology/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Bussotti</surname>
<given-names>Simona</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Guidetti</surname>
<given-names>Paolo</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Rossi</surname>
<given-names>Francesca</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/134580/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/data-curation/"/>
<role content-type="https://credit.niso.org/contributor-roles/methodology/"/>
<role content-type="https://credit.niso.org/contributor-roles/supervision/"/>
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</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Universit&#xe9; C&#xf4;te d&#x2019;Azur, Laboratory of Ecology and Conservation Science for Sustainable Seas (ECOSEAS, UMR 7035)</institution>, <addr-line>Nice</addr-line>,&#xa0;<country>France</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>CNRS, Cultures, Environnements, Pr&#xe9;histoire, Antiquit&#xe9;, Moyen &#xc2;ge (CEPAM, UMR 7264)</institution>, <addr-line>Nice</addr-line>,&#xa0;<country>France</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Department of Integrative Marine Ecology (EMI), Genoa Marine Centre (GMC), Stazione Zoologica Anton Dohrn &#x2013; National Institute of Marine Biology, Ecology and Biotechnology</institution>, <addr-line>Villa del Principe, Genoa</addr-line>,&#xa0;<country>Italy</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>National Research Council, Institute for the Study of Anthropic Impact and Sustainability in the Marine Environment (CNR-IAS)</institution>, <addr-line>Genoa</addr-line>,&#xa0;<country>Italy</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Elena Gissi, National Research Council (CNR), Italy</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Fabio Fiorentino, National Research Council (CNR), Italy</p>
<p>Britas Klemens Eriksson, University of Groningen, Netherlands</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Audrey Marguin, <email xlink:href="mailto:marguinaudrey@gmail.com">marguinaudrey@gmail.com</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>13</day>
<month>08</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>12</volume>
<elocation-id>1489965</elocation-id>
<history>
<date date-type="received">
<day>02</day>
<month>09</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>21</day>
<month>07</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Marguin, Bussotti, Guidetti and Rossi.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Marguin, Bussotti, Guidetti and Rossi</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Fishing activities alter food web diversity and functioning. Trophic level (TL) has been used as an indicator to assess such impacts on populations and assemblages. We reviewed the scientific literature that examined the relationship between fishing and the trophic aspects of fish species and communities, by focussing on TL. We narrowed the research to the Mediterranean Sea, where fishing is an important economic income for some coastal human populations and might be jeopardised by overfishing and climate change. We collected information on the (i) geographical location; (ii) type of fisheries and (iii) the methodological approach. The 68 collected studies were geographically skewed towards the Western Mediterranean, Adriatic Sea and around Greece. Among the 45 modelling studies, 41 reported TLs for communities or catches. For the field studies, only 6 estimated TLs of species and used stable isotope analysis. Most modelling studies used data from other models, online databases or large-scale monitoring of commercial catches and research surveys, whereas the field studies collected fish locally. Only 6 field and 5 modelling studies used fishing bans or the fully protected zone of marine protected areas as no-fishing control. In these studies, TL values showed different patterns of response to fishing, probably because of differences in environmental factors. Interestingly, recent modelling studies used predictions from the model to explore the impact of different fishing pressure within global change scenarios. The use of trophodynamic modelling is powerful to describe large scale impacts and infer future scenarios, but the <italic>in situ</italic> approach, the use of stable isotopes and spatial comparisons among areas of different fishing pressure, such as no-take zones in MPA could add insights into local variations of fish TLs in response to perturbations, which might be important to refine the outcomes of the models.</p>
</abstract>
<kwd-group>
<kwd>trophic position</kwd>
<kwd>trophic interactions</kwd>
<kwd>trophic cascade</kwd>
<kwd>fishery</kwd>
<kwd>foodweb</kwd>
<kwd>Mediterranean Sea</kwd>
</kwd-group>    <contract-num rid="cn001">01002721</contract-num>    <contract-sponsor id="cn001">HORIZON EUROPE European Research Council<named-content content-type="fundref-id">10.13039/100019180</named-content>
</contract-sponsor>
<counts>
<fig-count count="6"/>
<table-count count="1"/>
<equation-count count="3"/>
<ref-count count="98"/>
<page-count count="12"/>
<word-count count="5302"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Marine Ecosystem Ecology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>The impact of fishing activities on marine communities, food webs and seafood supply has been of increasing concern for the last 3 decades (<xref ref-type="bibr" rid="B63">Pauly et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B19">Corrales et&#xa0;al., 2015</xref>). Fishing may often target large, slow-growing adult fishes that occupy high trophic levels (<xref ref-type="bibr" rid="B26">Farrugio et&#xa0;al., 1993</xref>; <xref ref-type="bibr" rid="B96">Watson et&#xa0;al., 2013</xref>). When these species become less available and overfished, fishing intensifies the capturing of fishes occupying lower trophic levels; i.e. the so-called &#x2018;fishing down food webs&#x2019; (<xref ref-type="bibr" rid="B63">Pauly et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B3">Andersen and Pedersen, 2010</xref>; <xref ref-type="bibr" rid="B86">Tremblay-Boyer et&#xa0;al., 2011</xref>). At an ecosystem level, the removal of high-level predators triggers trophic cascades, affects the biomass, feeding behaviour and diet of intermediate consumers (<xref ref-type="bibr" rid="B34">Guest et&#xa0;al., 2004</xref>), thereby altering the structure of the food web (e.g. <xref ref-type="bibr" rid="B44">Libralato et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B28">Fry and Davis, 2015</xref>; <xref ref-type="bibr" rid="B10">Cardona et&#xa0;al., 2022</xref>). This may lead to potential regime shifts (<xref ref-type="bibr" rid="B57">M&#xf6;llmann et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B70">Rocha et&#xa0;al., 2015</xref>) and ultimately to the loss of ecosystem functions (<xref ref-type="bibr" rid="B50">Lotze et&#xa0;al., 2006</xref>, <xref ref-type="bibr" rid="B49">2011</xref>; <xref ref-type="bibr" rid="B48">Longo et&#xa0;al., 2015</xref>). In the Mediterranean Sea, fishing often targets intermediate consumers, which may still impact the low levels of the food web through trophic cascades. For instance, the fishing of the Sparidae <italic>Diplodus</italic> spp. led to the dramatic increase of sea urchins and the loss of macroalgal cover, causing the shift of subtidal rocky reefs from macroalgal-dominated substrates to coralline barrens (<xref ref-type="bibr" rid="B72">Sala et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B35">Guidetti, 2006</xref>). These effects may be exacerbated in the proximity of coastal marine areas, where human activities and human-driven climate change strongly impacts biodiversity and impairs important ecosystem services (<xref ref-type="bibr" rid="B31">Giakoumi et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B37">Halpern et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B97">Zhang et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B79">Simeoni et&#xa0;al., 2023</xref>).</p>
<p>
<xref ref-type="bibr" rid="B23">Elton (1927)</xref> provided the fundamental concepts of food chains, trophic pyramids, and trophic levels to define food webs. Since then, estimating the trophic level (TL) occupied by populations and the overall community has become a fundamental component for understanding trophic structure. The TL of populations and of the overall community has been used for indicating the health of food webs affected by human activities (<xref ref-type="bibr" rid="B82">Stergiou and Karpouzi, 2001</xref>; <xref ref-type="bibr" rid="B68">Post, 2002</xref>; <xref ref-type="bibr" rid="B41">Karachle and Stergiou, 2017</xref>; <xref ref-type="bibr" rid="B21">Davis et&#xa0;al., 2019</xref>), including the impact of fishing (<xref ref-type="bibr" rid="B78">Shannon et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B43">Kytinou et&#xa0;al., 2020</xref>) and the status of fisheries (<xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>). At a population level, the TL can allow exploring changes in the diet of the target consumers and thus their role in energy transfer (<xref ref-type="bibr" rid="B11">Cardona et&#xa0;al., 2023</xref>), whereas at community level TL may indicate the reduction in biomass of predators and the shift of the food web to a dominance of low trophic level consumers (<xref ref-type="bibr" rid="B63">Pauly et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B64">Pauly and Palomares, 2005</xref>). The TL definition follows an energy-flow approach and it is based on discrete numbers identifying the place of an organism within a linear food chain (e.g. herbivore, omnivore or predator; <xref ref-type="bibr" rid="B45">Lindeman, 1942</xref>; <xref ref-type="bibr" rid="B78">Shannon et&#xa0;al., 2014</xref>). This place can be estimated by observing the feeding behaviour and analysing morphological traits related to feeding. However, in nature, what is empirically observed is continuous rather than discrete changes in TL, sometimes called trophic position (TP, <xref ref-type="bibr" rid="B85">Thompson et&#xa0;al., 2012</xref>).These changes in TL (or TP) can be estimated by analysing what an organism has ingested (e.g. stomach content analysis, SCA, <xref ref-type="bibr" rid="B39">Hyslop, 1980</xref>) or what has been assimilated over time, often using stable isotope analysis (SIA). In this case, SIA is based on the idea that the isotopic ratio of a consumer reflects that of its prey, by taking into account the known isotopic enrichment from the prey to the predator (e.g. fractionation; <xref ref-type="bibr" rid="B68">Post, 2002</xref>).</p>
<p>Despite the great progress achieved through the development of new tools and techniques, food web analysis still suffers from important knowledge gaps and limitations of the methodological approaches (<xref ref-type="bibr" rid="B43">Kytinou et&#xa0;al., 2020</xref>). Moreover, although fishing exploitation is considered a primary driver to affect food webs, important information such as diet, trophic level estimation, especially for omnivorous species, can be scant (<xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B43">Kytinou et&#xa0;al., 2020</xref>).</p>
<p>This paper presents a systematic review of studies investigating the relationship between fishing activities and the trophic structure of fish populations and assemblages. It specifically focus on the use of trophic level (TL) as a tool to indicate both the state of fisheries and the healthy status of the fish community. Particular attention is given to the research conducted in the Mediterranean Sea, where fishing activities near the shore account for a large proportion of landings (<xref ref-type="bibr" rid="B47">Lloret et&#xa0;al., 2020</xref>, <xref ref-type="bibr" rid="B24">FAO, 2022</xref>) and fishing management needs to be improved for a long-term sustainability (<xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>). Understanding the trophic impacts of fishing might provide fundamental information to ecosystem-based management. Our review builds upon previous syntheses of food web dynamics and the impacts of fishing in the Mediterranean (<xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B43">Kytinou et&#xa0;al., 2020</xref>), by integrating data on Mediterranean fisheries with ecological approaches that assess trophic interactions within coastal fish communities. In details, this systematic review aims to:</p>
<p>(1) Provide a synthesis of the geographical distribution of studies, the types of fishing practices, and the methodological approaches used to estimate TL or trophic position (TP)&#x2014;which here are considered as an interchangeable terms (<xref ref-type="bibr" rid="B40">Ishikawa et&#xa0;al., 2024</xref>).</p>
<p>(2) Identify studies considering different levels of fishing pressure and compare the variations of trophic level or positions in relation to the fishing pressure.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<label>2</label>
<title>Materials and methods</title>
<p>A systematic literature review was conducted following the PRISMA methodology (<xref ref-type="bibr" rid="B56">Moher et&#xa0;al., 2010</xref>). The research of relevant articles was performed using the ISI Web of Science core collection database on the 15<sup>th</sup> of December 2023. Web of Science allows for refined and reproducible searches using detailed filters (e.g., topic, journal, author). This database is also widely used in systematic reviews, making the search strategy reproducible and the methodology consistent with established review standards. We then used Google Scholar as a supplementary quality control to ensure that no relevant studies were missed in the primary search. We first used the string: &#x201c;(fishing OR fishery OR fisheries) AND (Mediterranean) AND (foodweb OR &#x201c;food web&#x201d; OR &#x201c;food-web&#x201d; OR &#x201c;trophic level&#x201d; OR &#x201c;trophic interaction&#x201d; OR &#x201c;trophic cascade&#x201d; OR &#x201c;trophic guild&#x201d; OR &#x201c;trophic group&#x201d; OR &#x201c;trophic position&#x201d; OR &#x201c;trophic length&#x201d; OR &#x201c;gut content&#x201d;) NOT (freshwater OR lake)&#x201d;, with no restriction on publication year.</p>
<p>Then, by performing the quality control on google scholar we found that the string had left uncovered articles concerning the evaluation of fishing impact on food webs in Marine Protected Areas, considered as no-fishing ground (fully protected zone). We thus added this part to the search, by completing with the following string: &#x201c;(MPA&#x201d; OR &#x201c;marine reserve&#x201d; OR &#x201c;marine national park&#x201d; OR &#x201c;marine protected area&#x201d;)&#x201d;. To ensure scientific rigour and comparability across studies, we restricted our selection to peer-reviewed articles, thereby excluding grey literature. It was indeed difficult not only to access grey literature in an exhaustive manner but also to determine if the found papers could be representative of the study area.</p>
<p>We collected 682 papers, which were first screened through the title and then through the abstract (rounds 1 and 2 in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). We excluded reviews and research papers that focussed on bioaccumulation or targeted exclusively the pelagic food webs without considering the coastal environment. Specifically, for modelling studies, we selected articles mentioning at least one functional group described as coastal by the authors.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Flow diagram of the selection process used in this review (PRISMA methodology, modified from <xref ref-type="bibr" rid="B56">Moher et&#xa0;al., 2010</xref>).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1489965-g001.tif">
<alt-text content-type="machine-generated">Flowchart depicting the identification and screening process for study selection. Initial records total 707 from two search strategies. Post-duplicate deletion, 682 records remain. Screening in round one results in 323 records, with 171 excluded. Round two assesses 152 full-text articles, excluding 84. Final selection includes 68 studies in qualitative synthesis.</alt-text>
</graphic>
</fig>
<p>The 152 remaining papers were searched through Introduction, Materials and Methods and Results and retained if they explicitly considered the impacts of fishing activities on trophic aspects of coastal fish populations and assemblages, including trophic interactions, feeding and, of course, trophic level (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). The final dataset included 68 papers. We recorded: (i) the publication year, (ii) the geographical locations where the study was done (countries, geographical sub-area (GSA; <xref ref-type="bibr" rid="B24">FAO, 2022</xref>), (iii) the type of fisheries (trawl and purse seine fisheries, grouped under the label &#x201c;industrial&#x201d;, small-scale fisheries (SSFs), and recreational fisheries), (iv) the methodological approach. We focussed on the type of study (Modelling, Field study), how trophic aspects were taken into account and how TL was estimated, including the biological scale of interest (population, community). We also reported the studies directly comparing areas that differed in fishing pressures; e.g. studies that included both areas under the impact of fishing and control areas such as Marine protected areas (MPA) or Fisheries restricted areas (FRA), where fishing activities were excluded or reduced. Of these, 9 studies that specifically evaluated trophic level (TL) were retained to assess how TL values vary between fished and non-fished areas. From those studies comparing fishing and no fishing areas, we extracted the TL values reported in the papers; e.g. population-level TL, mean TL for catches and communities (mTLc and mTLco, respectively).</p>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results and discussion</title>
<p>The 68 collected publications spanned between 2000 and 2023. There was an increasing number of
papers through the years and a remarkable inter-annual variability, with a maximum of 8 studies in 2009 and 2021 (<xref ref-type="supplementary-material" rid="SF1">
<bold>Supplementary Figure S1</bold>
</xref>).</p>
<sec id="s3_1">
<label>3.1</label>
<title>Geographical areas</title>
<p>The Mediterranean Sea, excluding the Black Sea, is divided into 27 fishing areas referred to as Geographical sub-areas (GSAs) and sometimes studies referred to the GSA as the study location. The collected publications referred to 16 GSAs, mostly those situated in the northern Catalan (Spain), the Adriatic Sea (Italy and Croatia), the Ionian and Aegean Sea (Italy, Greece) or the Sicilian Channel (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>; <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref> and <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Reference</bold>
</xref> list). Most studies conducted research in Italy, Spain, and around Greece (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>). Except for Tunisia, where 2 studies were found, our research did not identify any published paper considering the southern Mediterranean countries outside Europe (e.g. Algeria, Egypt, Libya and Morocco), despite their high biomass of landings (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3B</bold>
</xref>). The lack of information observed in the southern Mediterranean could be explained by the weak institutional capacity to collect and publish fisheries data. However, there could be data available in the grey literature, which we did not consider as explained in the previous section (FAO 2020). Nonetheless, it is necessary to fill in this gap because these regions possess important artisanal fleets and trawlers, comparable to the most studied GSAs. The largest artisanal fleets occur in Greece (Aegean Sea) and Tunisia, while trawlers are mainly concentrated in Egypt, Spain together with the Adriatic Sea (Croatia, Italy) and Algeria (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3B</bold>
</xref>; <xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B24">FAO, 2022</xref>). They are also countries where artisanal fishing is not only a source of food, but also an important cultural heritage, where landings represent more than a quarter of the total landings of the Mediterranean (Black Sea excluded, <xref ref-type="bibr" rid="B24">FAO, 2022</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Distribution of the studies across the Mediterranean per GSA.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1489965-g002.tif">
<alt-text content-type="machine-generated">Map of the Generalized System Areas (GSA) in the Mediterranean, showing regions numbered 1 to 28. The map is color-coded to indicate the number of studies conducted in each area, ranging from none to sixteen. Regions include parts of Spain, Italy, France, Tunisia, and Greece, among others. A legend on the right shows the gradient from light to dark red, signifying increasing study numbers.</alt-text>
</graphic>
</fig>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>
<bold>(A)</bold> Number of studies per country and <bold>(B)</bold> Biomass of landings per country and trawlers percentage among the fishing fleet based on <xref ref-type="bibr" rid="B16">Colloca et&#xa0;al. (2017)</xref>, grey= non-available values.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1489965-g003.tif">
<alt-text content-type="machine-generated">Bar charts showing two sets of data. Chart A presents the number of studies conducted in various countries, with Spain (18) and Italy (17) having the highest numbers. Chart B illustrates fish landings in tonnes by country, with Italy having the highest landings at over 150,000 tonnes. Both charts include a color gradient indicating trawling levels from 10 to 30.</alt-text>
</graphic>
</fig>
<p>There is growing concern about the sustainability of the current level of fishing exploitation in relation to the unbalanced and unregulated fishing in several areas of the Mediterranean, and a call for ecosystem-based management of fisheries within the context of future scenarios of global change (<xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>). These scenarios include the increasing presence of alien species, warming, and changes in fishing pressure (<xref ref-type="bibr" rid="B54">Michailidis et&#xa0;al., 2019</xref>).</p>
<p>Southern Mediterranean countries are considered hot spots for climate change or invasions and their impacts on fisheries and coastal ecosystems (<xref ref-type="bibr" rid="B25">Farahmand et&#xa0;al., 2023</xref>). The understanding of fishing impact in southern countries is thus necessary and it could be improved by collecting well-sounded scientific data and refining existing models of fishing impacts at the scale of the Mediterranean or specifically built for the social and ecological conditions of these countries. This is also important to assist the management of fisheries in rural areas and their evolution in terms of fishing capacity (<xref ref-type="bibr" rid="B52">Maynou, 2020</xref>).</p>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Types of fisheries</title>
<p>Among the reviewed studies, 36 considered a combination of different types of fisheries, 14 did not specify the type of fisheries and only 17 reported to focus exclusively on one type of fisheries; e.g. 8 on industrial, 8 on small-scale fisheries (SSF) and only 2 on recreational fisheries (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>, <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). SSF in the Mediterranean is multispecies, multigear, and very complex to evaluate in a simple manner. Yet, information on the distinct impacts of SSF, industrial and recreational fishing is needed to implement more effective management in the Mediterranean and worldwide (<xref ref-type="bibr" rid="B32">Go&#xf1;i et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B9">Cal&#xf2; et&#xa0;al., 2022</xref>). The different gear types used in SSF are generally considered less destructive to coastal ecosystems than industrial fishing gears (<xref ref-type="bibr" rid="B20">Crowder et&#xa0;al., 2008</xref>), but they can have potential ecosystem-wide effects (<xref ref-type="bibr" rid="B83">Stergiou et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B20">Crowder et&#xa0;al., 2008</xref>). As expected, the papers we collected that reported on the impact of industrial fisheries, particularly trawling, showed a strong decrease in the health of the whole food web (e.g. <xref ref-type="bibr" rid="B13">Coll et&#xa0;al., 2008a</xref>; <xref ref-type="bibr" rid="B44">Libralato et&#xa0;al., 2010</xref>). They also showed how increasing the selectivity of trawls could mitigate effects on TLs and other trophic indicators (<xref ref-type="bibr" rid="B13">Coll et&#xa0;al., 2008a</xref>; <xref ref-type="bibr" rid="B75">Saygu et&#xa0;al., 2020b</xref>). These authors showed that using a large mesh size could have a positive effect on the biomass of both commercial and non-commercial species, thereby improving the TL of the community (TLco; <xref ref-type="bibr" rid="B13">Coll et&#xa0;al., 2008a</xref>) or the TL of catches (TLc, <xref ref-type="bibr" rid="B75">Saygu et&#xa0;al., 2020b</xref>).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Repartition of the fisheries type among the collected studies. All= Industrial, Small scale and recreational; I= Industrial; NS= Not specified; R= Recreational; Several=Combination of 2 fisheries (e.g. SSF+R or SSF+I or R+I); SSF= Small Scale fishery; More details are in the text and in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1489965-g004.tif">
<alt-text content-type="machine-generated">Donut chart showing the distribution of 68 fisheries by type. Segments represent: All (13), I (8), NS (8), R (14), Several (2), SSF (23). Dark to light shades indicate different types.</alt-text>
</graphic>
</fig>
<p>Nevertheless, the authors also emphasise the need of reducing fishing effort in heavily exploited or overexploited fisheries.</p>
<p>The two papers on the impact of SSF in the Corsica island considered fish net, spiny lobster and small trawling. They found SSF to have a very low impact, probably because of the very low level of exploitation of the system. Indeed, evaluation of TL indicators showed small changes in time or considering different fishing pressure scenarios. Nonetheless, they highlighted the negative impact of SSF on functional groups with the highest TLs; e.g. rays and sharks and also on non-targeted groups (<xref ref-type="bibr" rid="B89">Vanalderweireldt et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B51">Marengo et&#xa0;al., 2023</xref>). The effects of SSF were also variable among geographical areas and strongest in the Ionian and Eastern Mediterranean Sea, probably because of the environmental characteristics of the areas, such as low productivity but also because of the highest number of SSF vessels (<xref ref-type="bibr" rid="B18">Corrales et&#xa0;al., 2018</xref>). Similar impacts were reported for recreational fisheries (<xref ref-type="bibr" rid="B46">Lloret et&#xa0;al., 2008</xref>). However, recreational fishery was found severely under-represented in the published literature, even if this type of fisheries has been described as important in the Mediterranean Sea (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>; <xref ref-type="bibr" rid="B47">Lloret et&#xa0;al., 2020</xref>). This may pose a serious bias in estimating fishing impact on food webs.</p>
<p>While some studies focussed specifically on a single fishery type, others took a gear-based approach to infer fishery impacts.&#x2014;information that can help infer the type of fishery involved (<xref ref-type="bibr" rid="B80">Smith and Basurto, 2019</xref>). These studies consistently found that bottom trawling&#x2014;commonly used in industrial and semi-industrial fisheries&#x2014;was the main driver of negative impacts on most exploited functional groups. For example, several regional studies assessed the effects of trawling in the southern Catalan Sea (<xref ref-type="bibr" rid="B13">Coll et&#xa0;al., 2008a</xref>, <xref ref-type="bibr" rid="B14">2008b</xref>), the Gulf of Gab&#xe8;s (<xref ref-type="bibr" rid="B38">Hattab et&#xa0;al., 2013</xref>), and the Eastern Mediterranean Sea (<xref ref-type="bibr" rid="B18">Corrales et&#xa0;al., 2018</xref>), all highlighting its impact on demersal community species. A broader study across the entire Mediterranean basin reported similar findings (<xref ref-type="bibr" rid="B66">Piroddi et&#xa0;al., 2015</xref>). Additionally, <xref ref-type="bibr" rid="B18">Corrales et&#xa0;al. (2018)</xref> also documented a clear increase in community-level trophic indicators (TLc and TLco) after a cessation of trawling.</p>    <p>In contrast, small-scale fisheries (SSF) generally exert a lower ecological impact than trawling (e.g., <xref ref-type="bibr" rid="B6">B&#x103;naru et&#xa0;al., 2013</xref>) or recreational fishing (<xref ref-type="bibr" rid="B69">Prato et&#xa0;al., 2016</xref>). However, some research highlights that SSF can negatively affect species at the highest trophic levels, particularly non-targeted species such as dolphins, seabirds, and sea turtles (e.g., <xref ref-type="bibr" rid="B54">Michailidis et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B42">Keramidas et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B73">S&#xe1;nchez-Zulueta et&#xa0;al., 2023</xref>). Similarly, recreational fishing has been shown to impact top predators, including dolphinfish (<xref ref-type="bibr" rid="B73">S&#xe1;nchez-Zulueta et&#xa0;al., 2023</xref>) and sharks (<xref ref-type="bibr" rid="B54">Michailidis et&#xa0;al., 2019</xref>). These impacts on upper trophic levels may trigger top-down effects. For instance, <xref ref-type="bibr" rid="B69">Prato et&#xa0;al. (2016)</xref> suggest that recreational fishing, which often targets species with a trophic level above 3, could initiate trophic cascades. Additionally, <xref ref-type="bibr" rid="B1">Albouy et&#xa0;al. (2010)</xref> emphasise the combined effects of artisanal and recreational fishing fleets, reporting an increase in benthic mollusc feeders biomass, likely linked to intensified fishing pressure on higher trophic levels.</p>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Methodological approach</title>
<p>In agreement with other reviews on fisheries (<xref ref-type="bibr" rid="B12">Coll and Libralato, 2012</xref>; <xref ref-type="bibr" rid="B16">Colloca et&#xa0;al., 2017</xref>) and food webs (<xref ref-type="bibr" rid="B43">Kytinou et&#xa0;al., 2020</xref>), we found more studies using a modelling than a field approach (45 and 23, respectively). Among these, 16 field and 4 modelling studies did not report any estimates of TLs, while evaluating other aspects of the food web (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>, <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>).</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Repartition of the estimate of trophic level (TL) among the different types of TL for the collected studies. TL population= estimate for each fish species calculated using &#x3b4;<sup>15</sup>N, see <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>); TLc = estimates for catches done in modelling studies and in 1 field study (<xref ref-type="bibr" rid="B51">Marengo et&#xa0;al., 2023</xref>); TLco= estimates for the whole assemblage of consumers. More details are in the text and in <xref ref-type="table" rid="T1">
<bold>Tables&#xa0;1</bold>
</xref> and <xref ref-type="supplementary-material" rid="SM1">
<bold>S1</bold>
</xref>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1489965-g005.tif">
<alt-text content-type="machine-generated">Donut chart titled &#x201c;Trophic level estimate&#x201d; showing a sample size of sixty-eight. Segments are color-coded: &#x201c;No TL&#x201d; (lightest, twenty), &#x201c;TL population&#x201d; (light blue, six), &#x201c;TLc&#x201d; (medium blue, thirty-six), &#x201c;TLc+TLco&#x201d; (darker blue, four), and &#x201c;TLco&#x201d; (darkest blue, two). Legend on the right clarifies colors.</alt-text>
</graphic>
</fig>
<p>The 23 field studies reported results on trophic aspects of target fishes using various methods for <italic>in-situ</italic> data collection. The most widely used method was underwater visual census (UVC; 9 out of 23 studies) to quantify fish abundance and biomass per trophic group (fishes occupying similar TL, <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). Other studies (3) used bioassays to estimate the strength of trophic interactions, e.g. predation on intermediate consumers (e.g. <xref ref-type="bibr" rid="B35">Guidetti, 2006</xref>; <xref ref-type="bibr" rid="B90">Verg&#xe9;s et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B77">Seytre et&#xa0;al., 2013</xref>). Ten studies targeted wild fish populations, not necessarily of commercial value, captured with experimental fishing and used either stomach content analysis (2 studies, <xref ref-type="bibr" rid="B7">Bautista-Vega et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B98">Zorica et&#xa0;al., 2021</xref>), morphological traits (1 study, <xref ref-type="bibr" rid="B2">Al&#xf3;s et&#xa0;al., 2014</xref>) or stable isotope analysis (SIA; 6 studies; <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). Remaining 2 studies took advantage of landings, by interviewing what fishers had captured (<xref ref-type="bibr" rid="B46">Lloret et&#xa0;al., 2008</xref>) or using research survey that were independent from fishery data or sampled catches on fish vessels (<xref ref-type="bibr" rid="B51">Marengo et&#xa0;al., 2023</xref>). The use of SIA in only 6 out of 23 studies was surprising since SIA is currently the most extensively used method for the identification of trophic levels within foodwebs (<xref ref-type="bibr" rid="B43">Kytinou et&#xa0;al., 2020</xref>). These 6 studies using SIA (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>; <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>) estimated TL values for fish population using the &#x3b4;15N of fish muscles against a trophic baseline (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). The &#x3b4;15N baseline for estimating TL was usually measured from secondary consumers (<xref ref-type="bibr" rid="B4">Badalamenti et&#xa0;al., 2002</xref>, <xref ref-type="bibr" rid="B5">2008</xref>; <xref ref-type="bibr" rid="B22">Deudero et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B58">Moranta et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B98">Zorica et&#xa0;al., 2021</xref>) or derived from the literature (<xref ref-type="bibr" rid="B95">Vizzini and Mazzola, 2009</xref>). Instead, <xref ref-type="bibr" rid="B51">Marengo et&#xa0;al. (2023)</xref> used the data collected on fish species and the available online database (FishBase) for attributing TL values to each captured species and estimating mean catch TL.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>TL estimates for population using stable isotopes as defined by Post et&#xa0;al. (2002); communities of catches (TLc), as suggested by <xref ref-type="bibr" rid="B63">Pauly et&#xa0;al. (1998)</xref> and communities of consumers (TLco; <xref ref-type="bibr" rid="B78">Shannon et&#xa0;al., 2014</xref>).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">Indicators</th>
<th valign="top" align="left">Full name</th>
<th valign="top" align="left">Definition</th>
<th valign="top" align="left">References</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">TL population</td>
<td valign="top" align="left">Trophic level of a population</td>
<td valign="top" align="left">
<disp-formula>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:mi>T</mml:mi>
<mml:msub>
<mml:mi>L</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mrow>
<mml:mo>[</mml:mo>
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:msup>
<mml:mi>&#x3b4;</mml:mi>
<mml:mrow>
<mml:mn>15</mml:mn>
</mml:mrow>
</mml:msup>
<mml:msub>
<mml:mi>N</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msup>
<mml:mi>&#x3b4;</mml:mi>
<mml:mrow>
<mml:mn>15</mml:mn>
</mml:mrow>
</mml:msup>
<mml:msub>
<mml:mi>N</mml:mi>
<mml:mrow>
<mml:mi>r</mml:mi>
<mml:mi>e</mml:mi>
<mml:mi>f</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x394;</mml:mi>
<mml:msup>
<mml:mi>&#x3b4;</mml:mi>
<mml:mrow>
<mml:mn>15</mml:mn>
</mml:mrow>
</mml:msup>
<mml:msub>
<mml:mi>N</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
<mml:mo>]</mml:mo>
</mml:mrow>
<mml:mo>+</mml:mo>
<mml:mi>T</mml:mi>
<mml:msub>
<mml:mi>L</mml:mi>
<mml:mrow>
<mml:mi>r</mml:mi>
<mml:mi>e</mml:mi>
<mml:mi>f</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</disp-formula>
<break/>TL measured using stable isotope values of &#x3b4;<sup>15</sup>N of a species i, based on Post et&#xa0;al., 2002. TL<sub>i</sub> and TL<sub>ref</sub> are the trophic level of group i and a reference baseline material (usually phytoplankton or bivalves)</td>
<td valign="top" align="left">
<xref ref-type="bibr" rid="B68">Post, 2002</xref>
</td>
</tr>
<tr>
<td valign="top" align="left">TLc</td>
<td valign="top" align="left">Trophic level of landed catches</td>
<td valign="top" align="left">
<disp-formula>
<mml:math display="block" id="M2">
<mml:mrow>
<mml:mi>T</mml:mi>
<mml:msub>
<mml:mi>L</mml:mi>
<mml:mi>c</mml:mi>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:munderover>
<mml:mo>&#x2211;</mml:mo>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>=</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mi>n</mml:mi>
</mml:munderover>
<mml:msub>
<mml:mi>Y</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>.</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mi>T</mml:mi>
<mml:msub>
<mml:mi>L</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>Y</mml:mi>
<mml:mi>L</mml:mi>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<break/>where YL is total landings, Yi is the landing of species i, and TLi is the trophic level of species i</td>
<td valign="top" align="left">
<xref ref-type="bibr" rid="B63">Pauly et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B78">Shannon et&#xa0;al., 2014</xref>
</td>
</tr>
<tr>
<td valign="top" align="left">TLco</td>
<td valign="top" align="left">TL of the modelled community (from a specific ecosystem excluding primary producers)</td>
<td valign="top" align="left">
<disp-formula>
<mml:math display="block" id="M3">
<mml:mrow>
<mml:mi>T</mml:mi>
<mml:msub>
<mml:mi>L</mml:mi>
<mml:mrow>
<mml:mi>c</mml:mi>
<mml:mi>o</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:munderover>
<mml:mo>&#x2211;</mml:mo>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>=</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mi>n</mml:mi>
</mml:munderover>
<mml:msub>
<mml:mi>B</mml:mi>
<mml:mrow>
<mml:mi>M</mml:mi>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>.</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mi>T</mml:mi>
<mml:msub>
<mml:mi>L</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>B</mml:mi>
<mml:mrow>
<mml:mi>M</mml:mi>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<break/>where B<sub>MT</sub> is total biomass of the modelled ecosystem, B<sub>Mi</sub> is the biomass of each species i in the model, and TLi is the trophic level of species i as an output of the model</td>
<td valign="top" align="left">
<xref ref-type="bibr" rid="B78">Shannon et&#xa0;al., 2014</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>All modelling studies were based on trophodynamic models. Input data of biomass of fishes were derived from other published studies or online databases (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). Twenty-one studies used data from research survey which were fishery-independent, such as the MEDITS program (Mediterranean International bottom Trawl Surveys) (<xref ref-type="bibr" rid="B8">Bertrand et&#xa0;al., 2002</xref>) and a few studies used fishery-dependent data collected aboard vessels. Other fishery-dependent data were collected using fishers&#x2019; logbooks or (inter)national monitoring. Data on TLs of functional groups were in general derived from existing databases or calculated based on literature information on main prey, as described in <xref ref-type="bibr" rid="B82">Stergiou and Karpouzi (2001)</xref>. The model then combined biomass with TL and produced values relative to a part of the community or to catches. Most modelling studies evaluated the average TL value of catches (TLc or mTLc), while others evaluated community TLs of whole consumers including non-targeted species (TLco in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref> or mTLco or TLco&gt;1). Very few model studies evaluated both catch and community TLs (4 out of 45; <xref ref-type="bibr" rid="B87">Tsagarakis et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B18">Corrales et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B29">Garc&#xed;a-Rodr&#xed;guez et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B61">Papantoniou et&#xa0;al., 2021</xref>, <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>).</p>
<p>The population and community TLs as derived from field and modelling studies provides complementary information (<xref ref-type="bibr" rid="B53">McCormack et&#xa0;al., 2019</xref>). Field studies are often snapshots of a short-term situation, but those evaluating TL with stable isotopes can determine the trophic position of local fish populations, which can change, in response to perturbations and fishing pressure (<xref ref-type="bibr" rid="B60">Olson et&#xa0;al., 2020</xref>). This can become particularly important when evaluating ecosystem-based fisheries impacts, because the response of fish species to environmental changes may reflect a change in their trophic position, particularly important when generalist and omnivore fishes, prone to diet changes, are the most abundant taxa within the food webs and within catches.</p>
<p>In the modelling studies, the use of data considering large temporal and spatial scales, although necessary for covering large-scale food webs over time, does not take into account local variations of trophic position within the same species. In addition, when data comes from landings, there can be a non-negligible source of uncertainty and imprecision (<xref ref-type="bibr" rid="B78">Shannon et&#xa0;al., 2014</xref>). Specifically, landings data are not necessarily representative of actual catches, which also include illegal, unregulated and unreported fishing (IUUF) activities as well as discards (<xref ref-type="bibr" rid="B30">Garibaldi, 2012</xref>). The IUFF is a serious issue in the Mediterranean Sea (<xref ref-type="bibr" rid="B66">Piroddi et&#xa0;al., 2015</xref>) and little progress has been made in the Mediterranean to combat the phenomenon (<xref ref-type="bibr" rid="B81">Srour et&#xa0;al., 2020</xref>).</p>
</sec>
<sec id="s3_4">
<label>3.4</label>
<title>Trophic level comparison between fishing and non-fishing areas</title>
<p>Evaluating variation of TLs in relation to fishing activities might be difficult because it requires somehow similar ecological conditions but a different fishing pressure. Among the 21 studies &#x2014;that considered no-take zones of Marine Protected Areas (MPAs) or Fisheries Restricted Areas (FRAs) as the no-fishing conditions&#x2014;we found only 5 field studies and 4 modelling studies that compared trophic level (TL) values between fishing and no-fishing areas (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>). The average (&#xb1; SD or SE, when available) TL values of those studies are reported in <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>). The field studies focussing on population-level TLs showed different patterns of variability in response to protection (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>). <xref ref-type="bibr" rid="B58">Moranta et&#xa0;al. (2020)</xref> showed a positive effect of fishing ban on the rainbow wrasse <italic>Coris julis</italic> related to its ontogenetic development, when changes in competition and predation occur and might be affected by the level of protection. <xref ref-type="bibr" rid="B95">Vizzini and Mazzola (2009)</xref> found a decrease in TL values under full protection for 2 out of the nine species. Since these fishes were invertivores (<italic>C. julis</italic> and <italic>Diplodus annularis</italic>), they suggested a possible increase in their predators causing a shift in diet of these species. <xref ref-type="bibr" rid="B4">Badalamenti et&#xa0;al. (2002</xref>; <xref ref-type="bibr" rid="B5">2008)</xref>, instead, claimed that changes in biomass due to fishing ban were not followed by substantial size-related trophodynamic shifts, which might depend on the availability of food in the area or on the fact that the target species do not shift diet. All these studies were focussed on single species and did not investigate changes at the community level. In the modelling studies focussing on community level, 2 studies found higher TL of catches (TLc) in no-fishing than fishing area (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6B</bold>
</xref>; <xref ref-type="bibr" rid="B88">Valls et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B92">Vilas et&#xa0;al., 2020</xref>), but the remaining one showed values slightly higher before than after the establishment of a fishery restricted area (2.59 vs 2.50, respectively; <xref ref-type="bibr" rid="B93">Vilas et&#xa0;al., 2021</xref>). TLco was similar or slightly higher in no-fishing than fishing areas for the 4 studies reporting it (<xref ref-type="bibr" rid="B44">Libralato et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B88">Valls et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B92">Vilas et&#xa0;al., 2020</xref>, <xref ref-type="bibr" rid="B93">2021</xref>). These variations in the TL response to a fishing ban at both species and community level require further studies in order to gain a better understanding of the pattern of response of TL values under different fishing pressure. While, there is solid evidence of how the removal of human activities, including fishing, may increase diversity and biomass of fishes within food webs (e.g. <xref ref-type="bibr" rid="B84">Stobart et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B76">Seytre and Francour, 2014</xref>), it is possible that changes in fish trophic ecology and the resulting community shifts could be more related to environmental differences in the study area or to the species composition of the community and those more affected by protection. In particular, fishes occupying high trophic levels are more abundant and show larger sizes in no-take than other zones within MPAs (<xref ref-type="bibr" rid="B55">Micheli et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B17">Consoli et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B36">Guidetti et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B91">Viladrich et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B71">Rojo et&#xa0;al., 2021</xref>), thereby increasing predation pressure on low-level consumers and variably affecting other species, depending on the trophic level they occupy (<xref ref-type="bibr" rid="B35">Guidetti, 2006</xref>; <xref ref-type="bibr" rid="B90">Verg&#xe9;s et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B77">Seytre et&#xa0;al., 2013</xref>). These effects can also vary with local physical conditions and diversity (<xref ref-type="bibr" rid="B55">Micheli et&#xa0;al., 2005</xref>) or geographical scales (<xref ref-type="bibr" rid="B94">Villamor and Becerro, 2012</xref>). The papers we found were done in areas characterised by differences in seabed complexity and a different regime of oligotrophy (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>), which might have affected the results. Studying changes in population and community levels across MPAs with different species composition and environmental attributes could thus represent an important step for testing how changes in fishing activities may modify population and community TLs, within different environmental contexts.</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Values of trophic levels as reported in the revised papers (cited within the figure) that compared fishing vs. no-fishing areas. Plots are organised by GSA (as in <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2b</bold>
</xref>). <bold>(A)</bold> Trophic levels (TL) of fish population (mean &#xb1; SD or SE, as reported in field studies) based on stable isotopes analysis (SIA) and, <bold>(B)</bold> TL of catches and community (mTLc and mTLco, respectively) with TL consumers &gt;2 extracted from trophodynamic model studies.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1489965-g006.tif">
<alt-text content-type="machine-generated">Bar charts comparing trophic levels (TL) under fishing and no fishing scenarios in different geographic subareas (GSA). Chart A presents species-specific TL data from studies by Moranta et al. (2020), Badalamenti et al. (2002, 2008), Vizzini &amp; Mazzola (2009), and Zorica et al. (2021). Chart B displays TL types across areas from studies by Vilas et al. (2020), Valls et al. (2012), Vilas et al. (2021), and Libralato et al. (2010). Bars are color-coded: dark gray for fishing and light blue for no fishing.</alt-text>
</graphic>
</fig>
<p>In addition, it should be noted that 20 modelling studies showed how TLs values of community or catches decreased in time by analysing time series (<xref ref-type="bibr" rid="B13">Coll et&#xa0;al., 2008a</xref>; <xref ref-type="bibr" rid="B15">Coll et&#xa0;al., 2009a</xref>; <xref ref-type="bibr" rid="B27">Fortibuoni et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B51">Marengo et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B67">Piroddi et&#xa0;al., 2016</xref>) or by testing for scenarios of different fishing pressures (e.g. <xref ref-type="bibr" rid="B89">Vanalderweireldt et&#xa0;al., 2022</xref>; <xref ref-type="bibr" rid="B62">Papantoniou et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B59">Moutopoulos et&#xa0;al., 2018</xref>). Some papers also included changes in fishing pressure within global change scenarios by evaluating future catches of alien species (<xref ref-type="bibr" rid="B74">Saygu et&#xa0;al., 2020a</xref>, <xref ref-type="bibr" rid="B54">Michailidis et&#xa0;al., 2019</xref>) and/or the impact of warming (<xref ref-type="bibr" rid="B18">Corrales et&#xa0;al., 2018</xref>). These latter papers showed how changes in environmental conditions could drive impacts of fisheries.</p>
<p>In summary, our review on the literature explicitly dealing with the fishing impact on the trophic level (TL) of Mediterranean fish populations and assemblages highlights not only the geographical skewness of published studies, but also that more studies should focus on comparisons of population and community TL values between different levels of fishing pressure and under different regimes of environmental conditions, including geographical differences. This information would allow us to better understand how TL could be used as an indicator of fishing impact on food webs and to refine predictions on how changes in environmental conditions as those related to warming or invasions could modify fisheries. This is particularly important for food webs occupying the coastal shelf that are supported by a variety of autochtonous sources and under the influence of several human-induced drivers. No-take zones of marine protected areas or temporal fishing bans may offer good opportunities to quantify the impacts of fishing and the changes in TLs, using both field and modelling studies across the Mediterranean (<xref ref-type="bibr" rid="B65">Pinnegar et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B33">Grorud-Colvert et&#xa0;al., 2021</xref>). A better prediction of fisheries impacts on fish resources is of fundamental value in order to develop more effective conservation and ecosystem-based management measures in light of ongoing climate change and the importance of fishing activities in the Mediterranean Sea.</p>
</sec>
</sec>
</body>
<back>
<sec id="s4" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>. Further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s5" sec-type="author-contributions">
<title>Author contributions</title>
<p>AM: Conceptualization, Data curation, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing, Methodology. SB: Writing &#x2013; review &amp; editing. PG: Writing &#x2013; review &amp; editing. FR: Conceptualization, Data curation, Methodology, Supervision, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing.</p>
</sec>
<sec id="s6" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research and/or publication of this article. This project has received funding from the European Research Council (ERC) under the European Union&#x2019;s Horizon 2020 research and innovation program (Grant Agreement no. 101002721, acronym: MERMAID). AM was supported by a PhD grant under the MERMAID project.</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We would like to thank Tatiana Theodoropoulou, Emna Ben Lamine and Francesco Colloca for their support and advice on this paper.</p>
</ack>
<sec id="s7" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s8" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s9" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2025.1489965/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2025.1489965/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Table1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
<supplementary-material xlink:href="Image1.pdf" id="SF1" mimetype="application/pdf"/>
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