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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2025.1471650</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The size-fractionated composition of particulate biogenic silica and its ecological significance in the Changjiang Estuary area</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Xizhen</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Wang</surname>
<given-names>Bin</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1101787"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Siyang</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Jin</surname>
<given-names>Haiyan</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhuang</surname>
<given-names>Yanpei</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
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<contrib contrib-type="author">
<name>
<surname>Jiang</surname>
<given-names>Zhibing</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Li</surname>
<given-names>Hongliang</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
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<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Jianfang</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
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<aff id="aff1">
<sup>1</sup>
<institution>Marine Monitoring and Forecasting Center of Zhejiang Province</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Donghai Laboratory</institution>, <addr-line>Zhoushan</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Polar and Marine Research Institute, Jimei University</institution>, <addr-line>Xiamen</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Daniel Puppe, Leibniz Center for Agricultural Landscape Research (ZALF), Germany</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Yongquan Yuan, Chinese Academy of Sciences (CAS), China</p>
<p>Bin Zhao, Ministry of Natural Resources, China</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Bin Wang, <email xlink:href="mailto:wangbin@sio.org.cn">wangbin@sio.org.cn</email>; Hongliang Li, <email xlink:href="mailto:lihongliang@sio.org.cn">lihongliang@sio.org.cn</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>29</day>
<month>01</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>12</volume>
<elocation-id>1471650</elocation-id>
<history>
<date date-type="received">
<day>28</day>
<month>07</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>01</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Liu, Wang, Chen, Jin, Zhuang, Jiang, Li and Chen</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Liu, Wang, Chen, Jin, Zhuang, Jiang, Li and Chen</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>The concentrations and distributions of particulate biogenic silica (PBSi) and its size-fractionated composition (&gt;20 &#x3bc;m, 0.8&#x2013;20 &#x3bc;m) of the Changjiang Estuary and its adjacent area were investigated during the summer of 2011. PBSi, primarily produced by diatoms in the surface waters of oceans, was examined for correlations with hydrographic conditions, nutrients, particulate organic carbon, and dissolved oxygen. The distribution of PBSi showed distinct patterns: high levels in nearshore, but relatively low further offshore; low concentrations in the surface layer, whereas relatively high concentrations in the bottom layer. Large-sized PBSi (&gt;20 &#x3bc;m) prevailed in the surface layer, whereas small-sized PBSi (0.8&#x2013;20 &#x3bc;m) dominated in the bottom layer. Temperature and nutrients were crucial factors controlling the grain size structure and distribution of PBSi. Further, we observed that the distinct zones of high PBSi values in the surface waters were affected by the Changjiang freshwater flushing, and those in the bottom waters were affected by the Yellow Sea Cold Water masses. Moreover, in the area where &gt;20-&#x3bc;m PBSi prevailed, the silicate-to-nitrate ratio was less than 1 at most sampling stations, rendering silicate the limiting nutrient in this area. The PBSi/particulate organic carbon values in the surface waters of the study area ranged from 0.01 to 0.3. Areas exhibiting values exceeding 0.13 primarily clustered in nearshore waters, which was characterized by a dominance of large-sized (&gt;20 &#x3bc;m) PBSi. The nearshore benthic waters exhibited anoxic conditions, where diatoms predominantly comprised the phytoplankton biomass and organic matter featured marine phytoplankton. Consequently, the proliferation of diatoms (siliceous phytoplankton) in the midupper water significantly contributed to the hypoxic conditions at the bottom, as diatoms underwent dissolution during sedimentation, leading to oxygen depletion.</p>
</abstract>
<kwd-group>
<kwd>Changjiang Estuary</kwd>
<kwd>particulate biogenic silica</kwd>
<kwd>size-fractionated composition</kwd>
<kwd>particulate organic carbon</kwd>
<kwd>hypoxia</kwd>
</kwd-group>
<counts>
<fig-count count="10"/>
<table-count count="1"/>
<equation-count count="1"/>
<ref-count count="54"/>
<page-count count="14"/>
<word-count count="7047"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Marine Biogeochemistry</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>Diatoms play an important role in the marine biological pump process, contributing approximately 30% of global oceanic primary productivity (<xref ref-type="bibr" rid="B37">Nelson et&#xa0;al., 1995</xref>; <xref ref-type="bibr" rid="B45">Tr&#xe9;guer et&#xa0;al., 1995</xref>) and up to 75% in nearshore and eutrophic water (<xref ref-type="bibr" rid="B31">Liu et&#xa0;al., 2008</xref>). Biogenic silica (BSi) is produced in the surface waters of oceans, mostly by diatoms, but also by radiolarians and silicoflagellates (<xref ref-type="bibr" rid="B37">Nelson et&#xa0;al., 1995</xref>). The particulate biogenic silica (PBSi) in the water column represents the standing stock of BSi in the photic zone and can be used as an indicator of the instantaneous biomass of siliceous phytoplankton (<xref ref-type="bibr" rid="B36">Nelson et&#xa0;al., 2002</xref>).</p>
<p>The marginal sea is the main place of BSi burial and transformation and the main reservoir of BSi in the ocean, and it plays an important role in the global biogeochemical cycle of silica (<xref ref-type="bibr" rid="B12">Conley, 1997</xref>). As one of the most crucial estuarine-marginal sea regions worldwide, the Changjiang Estuary and its adjacent waters are the ideal place to study the distributional characteristics of BSi and its ecological effects. This is because of the unique hydrographic characteristics and abundant nutrient inputs. Diatoms dominate biomass over the East China Sea (ECS), particularly during the summer months, because of the Changjiang plume. The presence of diatom blooms resulted in significantly higher concentrations of PBSi in the surface layer in summer than in other seasons (<xref ref-type="bibr" rid="B9">Cao et&#xa0;al., 2013</xref>). The biogenic organic particulate matter from the upper layers of the water column is transformed, degraded, settled, and buried in the ocean sediments by the action of a silicate pump (<xref ref-type="bibr" rid="B8">Buesseler et&#xa0;al., 2001</xref>). The biogeochemistry of Si in the marine environment is of global significance. Further, the behavior of Si can be used as a proxy to understand the carbon cycle in the ocean, which drives the biological pump in the water column (<xref ref-type="bibr" rid="B46">Tr&#xe9;guer and Pondaven, 2000</xref>).</p>
<p>The BSi content of different size fractions varies significantly in ECS as it is largely controlled by the species of diatoms and their cell sizes. Thus, the grain size distribution of the bulk sediment should be considered when using BSi as a proxy for the primary production of diatom (<xref ref-type="bibr" rid="B49">Wang et&#xa0;al., 2014</xref>). The size-fractionated composition of PBSi is an important factor controlling the particulate organic carbon in marine areas where diatoms are the dominant population, and it is a good indicator of the biological pump efficiency in this area. However, the previous studies on ECS are mainly about the concentration of PBSi in water column and BSi in sediments (<xref ref-type="bibr" rid="B33">Liu et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B49">Wang et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B28">Li et&#xa0;al., 2018</xref>). Studies on the contribution of PBSi with different sizes of the standing stock of BSi in water columns and the ecological significance of the size-fractionated composition of PBSi are very limited. The occurrence of hypoxia off the Changjiang Estuary during summer can be traced back to the 1950s (<xref ref-type="bibr" rid="B29">Li et&#xa0;al., 2002</xref>), and the expansion of the affected area has been documented (<xref ref-type="bibr" rid="B29">Li et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B54">Zhu et&#xa0;al., 2011</xref>). Seasonal hypoxia off the Changjiang Estuary is an increasingly recognized environmental issue of global concern to both the scientific community and the public. It is caused by the decomposition of newly produced marine and riverine-borne biogenic substances deposited in the bottom water (<xref ref-type="bibr" rid="B11">Chen et&#xa0;al., 2007</xref>). Therein, marine-sourced organic matter is the dominant oxygen consumer in the subsurface hypoxia zone (<xref ref-type="bibr" rid="B48">Wang et&#xa0;al., 2016</xref>). Diatoms typically prevail in the phytoplankton community of nutrient-rich aquatic environments (<xref ref-type="bibr" rid="B37">Nelson et&#xa0;al., 1995</xref>; <xref ref-type="bibr" rid="B46">Tr&#xe9;guer and Pondaven, 2000</xref>). However, they exhibit rapid reproduction and opportunistic behavior, thriving in relatively cool temperatures (&lt;20&#xb0;C) and areas with turbulent mixing (<xref ref-type="bibr" rid="B34">Lomas and Glibert, 1999</xref>). Therefore, the factors affecting the distribution of BSi and the relationship between BSi and hypoxia formation are of equal interest. This article elucidates the size-fractionated composition of PBSi in the water column, its influencing factors, its relationship with particulate organic carbon (POC), and the formation of a hypoxia zone. Further, this study provides insights into the size-fractionated (&gt;20 &#x3bc;m, 0.8&#x2013;20 &#x3bc;m and total) composition of PBSi in the ECS and its biogeochemical cycling processes.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<label>2</label>
<title>Materials and methods</title>
<sec id="s2_1">
<label>2.1</label>
<title>Study site</title>
<p>The Changjiang Estuary and its adjacent area are among the most crucial estuarine-coastal ocean continuum worldwide. The region&#x2019;s water system is complex, including the cold, fresh, and nutrient-rich Changjiang Diluted Water and ECS Coastal Water; the warm and nutrient-poor Taiwan Warm Water Current and Kuroshio Water; and the relatively cold, fresh, and nutrient-rich Yellow Sea Coastal Water and the Yellow Sea Cold Water Mass (<xref ref-type="bibr" rid="B51">Zhang et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B10">Chen, 2009</xref>). During summer, southwest winds prevail and the Changjiang Diluted Water extends northeast toward the Tsushima/Korea Straits (<xref ref-type="bibr" rid="B3">Beardsley et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B30">Liu et&#xa0;al., 2016a</xref>). Extensive water exchange between the ECS and Kuroshio occurs across the shelf break through upwelling and frontal processes. The incursion of the Kuroshio sustains the upwelling conditions, which are enhanced by the summer southerly winds (<xref ref-type="bibr" rid="B41">Su, 1998</xref>; <xref ref-type="bibr" rid="B51">Zhang et&#xa0;al., 2007</xref>).</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Sample collection</title>
<p>This study was conducted from July 5 to July 25, 2011, onboard the scientific research vessel Dongfanghong 2 of the Ocean University of China for <italic>in situ</italic> observations in the Yellow Sea and ECS. As shown in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>, three sections (D, F, and PN) were investigated from the Changjiang Estuary to the outer shelf area. Water samples were collected using a precalibrated conductivity, temperature, and depth sensors unit (Sea-Bird Electronics, SBE-911 Plus) attached to 12-L Niskin bottles. After seawater was collected, 0.5&#x2013;2.0 L of seawater was filtered through a 20-&#x3bc;m pore-size nylon membrane to obtain PBSi samples with particle sizes of &gt;20 &#x3bc;m. Subsequently, the seawater was filtered through a 0.8-&#x3bc;m pore-size polycarbonate membrane to obtain PBSi samples with particle sizes ranging from 0.8 to 20 &#x3bc;m. Nutrient samples were filtered through precleaned cellulose acetate membranes (47&#xa0;mm, pore size 0.45 &#x3bc;m), and 0.3 mL of 35 g/L HgCl<sub>2</sub> was added into each 100 mL sample to preserve the samples for further analysis.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>The distribution of sampling stations and current systems in the investigated sea area, where CDW is the Changjiang Diluted Water, TWC is the Taiwan Warm Current, ECSCoW is the East China Sea Coastal Current, YSCoW is the Yellow Sea Coastal Water, and KSW is the Kuroshio Surface Water.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g001.tif"/>
</fig>
<p>For POC and POC stable carbon isotope (&#x3b4;<sup>13</sup>C) collection, 0.5&#x2013;2.0 L of seawater was filtered using GF/F filters (47&#xa0;mm, pore size 0.7 &#x3bc;m) that had been precombusted for 4&#xa0;h at 450&#xb0;C. For the Chlorophyll <italic>a</italic> (Chl <italic>a</italic>) collection, 150 mL of seawater was filtered through GF/F membrane filters under low pressure and dim light.</p>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>Analytical methods</title>
<p>Seawater temperature and practical salinity scale (without units) were measured <italic>in situ</italic> using the conductivity, temperature, and depth sensors. The samples for dissolved oxygen (DO) analyses were collected, fixed, and titrated onboard, following the classic Winkler titration procedure (<xref ref-type="bibr" rid="B6">Bryan et&#xa0;al., 1976</xref>). The precision of the DO measurements was &#xb1;0.02 mg/L.</p>
<p>The PBSi concentrations in the water were determined using the extraction method of <xref ref-type="bibr" rid="B39">Ragueneau et&#xa0;al. (2005)</xref>. The filters were dried at 60&#xb0;C and extracted twice with 4 mL of 0.2 mol/L NaOH in polyethylene centrifuge tubes at 100&#xb0;C for 40&#xa0;min two times. After centrifugation (3,036.8 &#xd7; g), the concentrations of Si and Al in the supernatant were determined for both the first step ([Si]<sub>1</sub> and [Al]<sub>1</sub>) and the second step ([Si]<sub>2</sub> and [Al]<sub>2</sub>). Silicate concentration was determined by spectrophotometry using a continuous nutrient flow analyzer (model Skalar San++, Skalar, Holland; <xref ref-type="bibr" rid="B16">Grasshoff et&#xa0;al., 2009</xref>), and Al concentration was measured on a Varian Vista Pro inductively coupled plasma atomic emission spectrometer. Since all BSi were extracted in the first step, the [Si]<sub>2</sub>:[Al]<sub>2</sub> ratio was specific to the sample&#x2019;s suspended silicate minerals. The accurate BSi concentration could be calculated using the following formula:</p>
<disp-formula id="eq1">
<label>(1)</label>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:mi>P</mml:mi>
<mml:mi>B</mml:mi>
<mml:mi>S</mml:mi>
<mml:mi>i</mml:mi>
<mml:mo>=</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mi>S</mml:mi>
<mml:mi>i</mml:mi>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
<mml:mn>1</mml:mn>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mi>A</mml:mi>
<mml:mi>l</mml:mi>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
<mml:mn>1</mml:mn>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mi>S</mml:mi>
<mml:mi>i</mml:mi>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
<mml:mn>2</mml:mn>
</mml:msub>
<mml:mo>:</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mi>A</mml:mi>
<mml:mi>l</mml:mi>
<mml:mo stretchy="false">]</mml:mo>
</mml:mrow>
<mml:mn>2</mml:mn>
</mml:msub>
</mml:mrow>
</mml:math>
</disp-formula>
<p>Nitrate and silicate concentrations were determined using a colorimetric method with a Skalar nutrient flow analyzer (<xref ref-type="bibr" rid="B16">Grasshoff et&#xa0;al., 2009</xref>). Meanwhile, nitrite, ammonium, and phosphate concentrations were determined manually <italic>in situ</italic> according to standard methods using a spectrophotometer (model 723, Shanghai Jingke, China). The data quality was monitored by intercalibration, and the detection limits for nitrate, nitrite, ammonium, phosphate, and silicate were 0.1, 0.05, 0.05, 0.03, and 0.1 &#x3bc;mol/L, respectively.</p>
<p>The filters for detecting POC and &#x3b4;<sup>13</sup>C were dried at 50&#xb0;C until constant weight; thereafter, they were decarbonated by fumigating with hydrochloric acid. Carbon concentrations were analyzed using an Elementar Vario MICRO cube elemental analyzer, and &#x3b4;<sup>13</sup>C was analyzed using a Thermo MAT 253 isotope ratio mass spectrometer. Chl <italic>a</italic> data were provided by Yuming Cai (personal communication, 2011). Further, filtered phytoplankton was jammed and extracted with 90% acetone overnight; thereafter, fluorescence was measured using a Turner Designs model 10.</p>
<p>The relationships between PBSi and other variables (e.g., POC and DO) were assessed using correlation analysis. Spearman&#x2019;s rank correlation was applied to evaluate the relationship between PBSi and POC, as it is suitable for non-normally distributed data and can effectively capture non-linear correlations. The relationship between PBSi and DO was examined using a logarithmic regression model, and the coefficient of determination (<italic>R</italic>
<sup>2</sup>) and p-value were calculated to assess the model&#x2019;s goodness of fit. To compare the differences in temperature, salinity, nitrate, phosphate, silicate, N/P and silicate/nitrate ratios, DO, and POC between two depth layers (above 10&#xa0;m and below 10&#xa0;m) across the three regions (I, II, and III), statistical tests were selected based on data distribution. For datasets that met the assumptions of normality and homoscedasticity, the independent samples t-test was used. For datasets that did not meet these assumptions, the non-parametric Mann-Whitney U test was employed. Additionally, to compare the distribution of PBSi concentrations in different size fractions (&lt;20 &#x3bc;m and 0.8&#x2013;20 &#x3bc;m) among regions I, II, and III, as well as the total PBSi distribution between surface and bottom layers, the same statistical approach was applied. The significance level was set at p &lt; 0.05, with statistical significance denoted as follows: *p &lt; 0.05, **p &lt; 0.01, and ***p &lt; 0.001, while &#x2018;ns&#x2019; indicated no significant difference. All statistical analyses were conducted using SPSS Statistics 27.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results</title>
<sec id="s3_1">
<label>3.1</label>
<title>Hydrographic conditions</title>
<p>The temperature and salinity in the study region ranged from 10.4&#xb0;C to 28.9&#xb0;C and 16.1 to 34.8, respectively. According to the temperature&#x2013;salinity analysis of the investigated area, five water masses in the study area were identified (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2A</bold>
</xref>), which were similar to those described in previous studies (<xref ref-type="bibr" rid="B10">Chen, 2009</xref>; <xref ref-type="bibr" rid="B51">Zhang et&#xa0;al., 2007</xref>). They include (1) Changjiang Diluted Water, with salinities of 22.0&#x2013;31.0 and temperatures of 20.0&#xb0;C&#x2013;30.0&#xb0;C, (2) Taiwan Warm Current Water, with characteristic salinities of 31.0&#x2013;34.0 and temperatures of 25.0&#xb0;C&#x2013;30.0&#xb0;C, (3) Shelf Mixed Water (SMW), with salinities of 31.0&#x2013;34.0 and temperatures of 15.0&#xb0;C&#x2013;25.0&#xb0;C, (4) Yellow Sea Cold Water, with salinities of 31.0&#x2013;34.0 and temperatures of 10.0&#xb0;C&#x2013;15.0&#xb0;C, and (5) Kuroshio Surface with salinities of 34.0&#x2013;35.0 and temperatures of 22.5&#xb0;C&#x2013;28.0&#xb0;C. The investigated area was divided into three parts based on the characteristics of different water masses (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>). Region I was mainly affected by the Changjiang Diluted Water, and Region II was affected by the relatively low-temperature and moderately saline SMW and Yellow Sea Cold Water Mass. Region III was mainly affected by the high-temperature and highly saline Taiwan Warm Current and the Kuroshio surface water, which included the stations east of P05 in Section PN. Owing to the big difference in the temperature and salinity of the surface and bottom waters in the investigated area in summer, as shown in <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>, the temperature and salinity characteristics of the waters above 10&#xa0;m and waters below 10&#xa0;m were divided and further analyzed to obtain the following results. For Region I, the salinity of the water column above 10&#xa0;m was &lt;31, which was the characteristic value of the Changjiang Diluted Water. The water column below 10&#xa0;m was caused by the water masses of the Changjiang Diluted Water, the coastal current of the Yellow Sea, and the Taiwan Warm Current, which defined the SMW (<xref ref-type="bibr" rid="B51">Zhang et&#xa0;al., 2007</xref>). For Region II, the water column above 10&#xa0;m showed the thermohaline characteristics of SMW. Further, the temperature of the water column below 10&#xa0;m was significantly low, all less than 15&#xb0;C, under the influence of the expansion of the Yellow Sea Cold Water Masses to the south in summer. In Region III, the waters above 10&#xa0;m were mainly affected by the Taiwan Warm Current with high temperature and subhigh salinity characteristics. Furthermore, the deep waters below 10&#xa0;m with high salinity characteristics could result from the intrusion of Kuroshio Surface Water (<xref ref-type="bibr" rid="B52">Zhou et&#xa0;al., 2018</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Scatter plot of potential temperature <italic>vs</italic>. salinity <bold>(A)</bold> and spatial division of the investigated area based on water mass characteristics <bold>(B)</bold>. <bold>(A)</bold> The scatter plot illustrates the characteristics of different water masses: CDW (Changjiang Diluted Water), TWC (Taiwan Warm Current), SMW (Shelf Mixed Water), YSCW (Yellow Sea Cold Water Mass), and KSW (Kuroshio Surface Water). The colors represent the spatial divisions: blue corresponds to Region I, green corresponds to Region II, and red corresponds to Region III. <bold>(B)</bold> The investigated area is divided into three regions based on water mass characteristics: Region I, Region II, and Region III. The station colors are consistent with panel <bold>(A)</bold>: blue represents Region I stations, green represents Region II stations, and red represents Region III stations.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g002.tif"/>
</fig>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Distribution of seawater constituents</title>
<p>The distributions of DO in surface and bottom water are shown in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>.&#xa0;A bottom hypoxia area (with DO concentration less than 3 mg/L) was found near the mouth of the Changjiang, centered at station P01 (St.P01, DO = 2.6 mg/L) and station F02 (St.F02, DO = 3.0 mg/L). However, this region did not exhibit high values of surface DO, with areas of high surface values occurring in St.D03 (DO = 8.4 mg/L) and St.D05 (DO = 8.0 mg/L). Due to sampling limitation, the surface DO sample for St.F02 was not obtained; therefore, the DO value of the 10&#xa0;m layer at this specific station is depicted in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>. The surface POC concentration showed a large variation, ranging from 2.0 to 20.1 &#x3bc;mol/L (8.6 &#xb1; 6.3 &#x3bc;mol/L, mean &#xb1; standard deviation, as used hereinafter) (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4A</bold>
</xref>). Two areas of relatively high POC concentrations were observed: the northern part outside the Changjiang Estuary was at St.D01 (POC = 26.0 &#x3bc;mol/L) and St.F02 (POC = 20.1 &#x3bc;mol/L), whereas the southern part was at St.P05 (POC = 13.8 &#x3bc;mol/L). In the vast majority of stations, the bottom POC values were greater than the surface values, ranging from 1.7 to 154.9 &#x3bc;mol/L (24.7 &#xb1; 38.0 &#x3bc;mol/L, <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4B</bold>
</xref>). Furthermore, DO and POC concentrations were calculated across the three regions (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). The results revealed that DO levels were generally lower in deeper waters (below 10&#xa0;m), with the most pronounced decrease observed in Region I. In contrast, POC concentrations exhibited high variability, with a significant increase in bottom waters of Region II, likely due to sediment resuspension or organic matter accumulation. This study examined nutrient concentrations in the upper and lower water column and analyzed them according to the various regions, as shown in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>. In the upper water column, nitrate concentration decreased offshore, with high concentration in Region I and low concentrations in Regions II and III. As the depth increased, nitrate levels decreased in Region I, whereas they increased in Regions II and III. The minimum average concentration for phosphate was observed in the water column below 10&#xa0;m in Region II. Meanwhile, the average phosphate levels in the water column from other regions varied slightly. The nearshore exhibited higher silicate concentrations in Region I, with mean values of 19.0 &#x3bc;mol/L and 21.1 &#x3bc;mol/L in the upper and lower waters, respectively, than in Regions II and Region III.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Distribution of dissolved oxygen concentration (mg/L) in the surface <bold>(A)</bold> and bottom <bold>(B)</bold> waters of the investigated area.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g003.tif"/>
</fig>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Distribution of the particulate organic carbon (POC) concentration (&#x3bc;mol/L) in the surface <bold>(A)</bold> and bottom <bold>(B)</bold> waters of the investigated area.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g004.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Temperature (&#xb0;C), salinity, nutrient concentrations (&#x3bc;mol/L), and nutrient ratios in the water column at different depths of the investigated area.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="center">Water column</th>
<th valign="top" align="center">Temperature</th>
<th valign="top" align="center">Salinity</th>
<th valign="top" align="center">Nitrate</th>
<th valign="top" align="center">Phosphate</th>
<th valign="top" align="center">Silicate</th>
<th valign="top" align="center">N/P</th>
<th valign="top" align="center">Silicate/nitrate</th>
<th valign="top" align="center">DO</th>
<th valign="top" align="center">POC</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">I (above 10 m)</td>
<td valign="top" align="center">23.8 &#xb1; 2.0</td>
<td valign="top" align="center">27.9 &#xb1; 2.7</td>
<td valign="top" align="center">18.7 &#xb1; 10.0</td>
<td valign="top" align="center">0.4 &#xb1; 0.3</td>
<td valign="top" align="center">19.0 &#xb1; 11.1</td>
<td valign="top" align="center">92.0 &#xb1; 74.6</td>
<td valign="top" align="center">1.0&#xb1;0.4</td>
<td valign="top" align="center">6.9&#xb1;1.5</td>
<td valign="top" align="center">11.1&#xb1;5.8</td>
</tr>
<tr>
<td valign="top" align="left">I (below 10m)</td>
<td valign="top" align="center">18.1&#xb1;2.1***</td>
<td valign="top" align="center">33.0&#xb1;1.3***</td>
<td valign="top" align="center">12.7&#xb1;3.5*</td>
<td valign="top" align="center">0.8&#xb1;0.5**</td>
<td valign="top" align="center">21.1&#xb1;5.0ns</td>
<td valign="top" align="center">22.9&#xb1;13.8***</td>
<td valign="top" align="center">1.7&#xb1;0.3***</td>
<td valign="top" align="center">4.6&#xb1;1.4***</td>
<td valign="top" align="center">25.0&#xb1;39.5ns</td>
</tr>
<tr>
<td valign="top" align="left">II (above 10 m)</td>
<td valign="top" align="center">22.3 &#xb1; 1.6</td>
<td valign="top" align="center">31.8 &#xb1; 0.4</td>
<td valign="top" align="center">0.9 &#xb1; 0.4</td>
<td valign="top" align="center">0.03 &#xb1; 0.05</td>
<td valign="top" align="center">10.9 &#xb1; 1.4</td>
<td valign="top" align="center">21.5 &#xb1; 8.7</td>
<td valign="top" align="center">13.7&#xb1;4.9</td>
<td valign="top" align="center">7.9&#xb1;0.3</td>
<td valign="top" align="center">4.8&#xb1;0.8</td>
</tr>
<tr>
<td valign="top" align="left">II (below 10m)</td>
<td valign="top" align="center">12.8&#xb1;3.1***</td>
<td valign="top" align="center">32.9&#xb1;0.4***</td>
<td valign="top" align="center">10.1&#xb1;2.9***</td>
<td valign="top" align="center">0.5&#xb1;0.2**</td>
<td valign="top" align="center">16.7&#xb1;1.5***</td>
<td valign="top" align="center">33.5&#xb1;26.7ns</td>
<td valign="top" align="center">1.8&#xb1;0.6***</td>
<td valign="top" align="center">7.2&#xb1;0.5**</td>
<td valign="top" align="center">32.8&#xb1;33.7**</td>
</tr>
<tr>
<td valign="top" align="left">III (above 10 m)</td>
<td valign="top" align="center">28.3 &#xb1; 0.5</td>
<td valign="top" align="center">32.7 &#xb1; 0.8</td>
<td valign="top" align="center">0.8 &#xb1; 0.5</td>
<td valign="top" align="center">0.2 &#xb1; 0.2</td>
<td valign="top" align="center">3.8 &#xb1; 1.6</td>
<td valign="top" align="center">17.1 &#xb1; 7.4</td>
<td valign="top" align="center">22.2&#xb1;55.3</td>
<td valign="top" align="center">6.7&#xb1;0.2</td>
<td valign="top" align="center">5.3&#xb1;3.9</td>
</tr>
<tr>
<td valign="top" align="left">III (below 10m)</td>
<td valign="top" align="center">22.7&#xb1;3.2***</td>
<td valign="top" align="center">34.2&#xb1;0.5***</td>
<td valign="top" align="center">4.0&#xb1;3.0**</td>
<td valign="top" align="center">0.4&#xb1;0.3**</td>
<td valign="top" align="center">10.3&#xb1;6.3**</td>
<td valign="top" align="center">15.7&#xb1;14.8ns</td>
<td valign="top" align="center">4.0&#xb1;3.1ns</td>
<td valign="top" align="center">5.8&#xb1;0.8**</td>
<td valign="top" align="center">4.1&#xb1;1.8ns</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>The numbers in the table represent the quantitative data as mean &#xb1; standard deviation (SD).</p>
</fn>
<fn>
<p>***p &lt; 0.001, **p &lt; 0.01, *p &lt; 0.05, ns, no statistical significance.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Characteristic of particulate biogenic silica distribution and size-fractionated compositions</title>
<p>The PBSi concentration in the surface layer ranged from 0.01 to 2.3 &#x3bc;mol/L (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>), with a mean concentration of 0.7 &#xb1; 0.8 &#x3bc;mol/L. The peak concentration of 2.3 &#x3bc;mol/L was recorded at St.P05, whereas the second highest concentration of 2.1 &#x3bc;mol/L was observed at St.F02, located at the mouth of the Changjiang. The levels of PBSi maxima were comparable to those of previous studies in the region (<xref ref-type="bibr" rid="B33">Liu et&#xa0;al., 2005</xref>). These two stations showed a dominance of PBSi in the &gt;20-&#x3bc;m size fraction, representing 69.7% and 79.4% of the total PBSi concentration, respectively. The PBSi concentration in the bottom layer ranged from 0.05 to 6.8 &#x3bc;mol/L (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5B</bold>
</xref>), with a mean concentration of 2.0 &#xb1; 2.1 &#x3bc;mol/L. The highest and second highest values of 6.8 and 6.2 &#x3bc;mol/L in the bottom layer were observed at stations D05 and D07, which were offshore and dominated by the PBSi of the 0.8&#x2013;20 &#x3bc;m size fraction. Further, they accounted for 73.6% and 84.6% of the total PBSi concentration, respectively. Additionally, the bottom PBSi concentration at nearshore St.P01 was relatively high, at 5.6 &#x3bc;mol/L, showing a predominance of the &gt;20- &#x3bc;m size fraction, representing 85% of the total PBSi concentration. The lowest concentrations in the surface and bottom layers were determined at offshore St.P12. Overall, the distribution of the surface PBSi showed a pattern of high concentration near the coast and low concentration further offshore, with high values concentrated in the Changjiang Estuary area. The bottom PBSi concentration was higher than that of the surface layer, and the high-value area in the bottom layer was concentrated in the offshore D05 area and the nearshore P01 area. Significant differences (p&lt;0.05) were observed between the bottom PBSi and the surface PBSi. For size-fractionated compositions, in surface waters, the PBSi concentration in the &gt;20-&#x3bc;m size fraction ranged from 0.004 to 1.7 &#x3bc;mol/L, accounting for 0.5% to 84.4% of the total PBSi, with an average proportion of 51.2%. In the bottom waters, the PBSi concentration in the 0.8&#x2013;20 &#x3bc;m size fraction ranged from 0.01 to 5.3 &#x3bc;mol/L, accounting for 11.2% to 98.5% of the total PBSi, with an average proportion of 66.3%. Overall, the large-particle-size PBSi (&gt;20 &#x3bc;m) predominated in the surface layer, accounting for 55.6% of the survey stations, primarily concentrated in the Changjiang Estuary. For the offshore area, the predominance of the large-particle-size PBSi gradually decreased, and the small-particle-size PBSi (0.8&#x2013;20 &#x3bc;m) predominated in the bottom layer, accounting for 72.2% of the survey stations.</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Distribution of the particulate biogenic silica (PBSi) concentration (&#x3bc;mol/L) in different size fractions in the surface <bold>(A)</bold> and bottom <bold>(B)</bold> waters of the investigated area. The triangle indicates the location of Station P01, and the pie chart marked by an arrow indicates the size-fractionated PBSi concentration (&#x3bc;mol/L) in Station P01.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g005.tif"/>
</fig>
<p>In Section D, the concentration of PBSi in the &gt;20-&#x3bc;m size fraction ranged from 0.01 to 1.8 &#x3bc;mol/L, with an average value of 0.4 &#xb1; 0.5 &#x3bc;mol/L, accounting for 24.7% of the total PBSi on average. Further, the PBSi concentration of particle size 0.8&#x2013;20 &#x3bc;m ranged from 0.08 to 5.3 &#x3bc;mol/L, with an average value of 1.6 &#xb1; 1.9 &#x3bc;mol/L, accounting for 75.3% of the total PBSi on average (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>). We found that in the majority of stations in Section D, the PBSi of particle size 0.8&#x2013;20 &#x3bc;m dominated. In Section F, the concentration of PBSi in the &gt;20-&#x3bc;m size fraction at all depths was in the range of 0.003&#x2013;0.8 &#x3bc;mol/L, with an average value of 0.3&#xb1; 0.5 &#x3bc;mol/L, accounting for 44.6% of the total PBSi on average. The concentration of PBSi in the 0.8&#x2013;20 &#x3bc;m size fraction ranged from 0.02 to 2 &#x3bc;mol/L, with an average value of 0.4 &#xb1; 0.5 &#x3bc;mol/L, accounting for 55.4% of the total PBSi on average (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6B</bold>
</xref>). We&#xa0;found that in Section F, the PBSi concentration in the 0.8&#x2013;20 &#x3bc;m size fraction was higher than that in the &gt;20-&#x3bc;m fraction. However, the dominance of the PBSi in the &gt;20-&#x3bc;m size fraction was concentrated in the surface and middle waters, and this dominance weakened with the increase in the depth of the water column. In Section PN, the concentration of PBSi in the &gt;20-&#x3bc;m size fraction at each depth ranged from 0.004 to 8.4 &#x3bc;mol/L, with an average value of 0.7 &#xb1; 1.8 &#x3bc;mol/L. It accounted for 0.4% to 88.8% of the total PBSi, with an average of 43.0%, and the &gt;20-&#x3bc;m PBSi size fraction dominated mainly in the surface water of the frontal zone at stations P03 and P05 (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6C</bold>
</xref>). The concentration of PBSi in the 0.8&#x2013;20 &#x3bc;m size fraction ranged from 0.01 to 9.6 &#x3bc;mol/L, with an average value of 0.9 &#xb1; 2.1 &#x3bc;mol/L, and the proportion of the total PBSi ranged from 11.2% to 99.6%, with an average of 57.0%. We considered that the PBSi in the 0.8&#x2013;20 &#x3bc;m size fraction was dominant, concentrating in the surface and middle water column at nearshore station P01 and in the bottom water column at most other stations. Furthermore, we calculated the size-fractionated PBSi concentration across the three regions (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7</bold>
</xref>). Region I and Region II exhibited higher PBSi levels in the 0.8&#x2013;20 &#x3bc;m size fraction compared to &gt;20-&#x3bc;m fraction, while Region III showed minimal differences between the two size fractions. In Region I, there was a significant difference (p&lt;0.05) in PBSi concentration between 0.8&#x2013;20 &#x3bc;m and &gt;20-&#x3bc;m, whereas in Regions II and III, there was no statistical significance.</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Distribution of PBSi concentration (&#x3bc;mol/L) in different size fractions in Sections D <bold>(A)</bold>, F <bold>(B)</bold>, and PN <bold>(C)</bold> of the investigated area. The dark blue shading indicates the PBSi concentration in the &gt;20-&#x3bc;m size fraction, whereas the stripes indicate the PBSi concentration in the 0.8&#x2013;20 &#x3bc;m size fraction.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g006.tif"/>
</fig>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>Distribution of PBSi concentration (&#x3bc;mol/L) in different size fractions across Regions I, II, and III. The dark blue bars represent the PBSi concentration in the &gt;20-&#x3bc;m size fraction, while the striped bars represent the PBSi concentration in the 0.8&#x2013;20 &#x3bc;m size fraction.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g007.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<label>4</label>
<title>Discussion</title>
<sec id="s4_1">
<label>4.1</label>
<title>Factors affecting the distribution of particulate biogenic silica</title>
<p>The concentrations of PBSi ranged from 0.01 to 18.03 &#x3bc;mol/L, with an average concentration of 1.3 &#xb1; 2.6 &#x3bc;mol/L. These values were comparable to those observed in the Bohai Sea and Yellow Sea during spring (1.1 &#xb1; 1.4 &#x3bc;mol/L) but lower than the concentrations recorded in the Bohai Sea and Yellow Sea during autumn (2.6 &#xb1; 2.1 &#x3bc;mol/L) (<xref ref-type="bibr" rid="B32">Liu et&#xa0;al., 2016b</xref>). To analyze the influence of different water masses on PBSi distribution, we calculated temperature, salinity, nitrate, phosphate, silicate, as well as N/P and silicate/nitrate ratios in the surface waters (0-10 m) and bottom waters (&gt;10 m depth to the seabed) across the three regions (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). Except for silicate in Region I, N/P ratios in Region II and III, and silicate/nitrate ratios in Region III, all other parameters showed significant differences between depths. High values of surface PBSi were mainly concentrated in Region I. Region I is affected by the diluted water from the Changjiang, which brings abundant nutrients to the ECS, thereby providing favorable conditions for the growth of diatoms. Freshwater inputs might contribute to the development of high PBSi values. Further, <xref ref-type="bibr" rid="B12">Conley (1997)</xref> reported that the PBSi levels in the world&#x2019;s rivers, including the Amazon, Mississippi, and Congo, ranged from (2.7 &#xb1; 0.52) to (74 &#xb1; 17.60) &#x3bc;mol/L, with an average level of 28 &#x3bc;mol/L. Diatoms thrive in nearshore waters, and compared with dinoflagellates, diatoms thrive better in environments with low salinity, turbidity, and high nutrients (<xref ref-type="bibr" rid="B20">Jiang et&#xa0;al., 2015</xref>). In circumstances of sufficient nutrients, diatoms have a competitive growth advantage, whereas in situations of insufficient nutrient supply later on, the growth of motile large dinoflagellates takes precedence (<xref ref-type="bibr" rid="B40">Savidge et&#xa0;al., 1995</xref>). The growth of diatoms depends not only on nitrate and phosphate but also on the supply of monomeric silicic acid, which can be used for building up frustules consisting of amorphous silica. In this area, the concentrations of nitrate and silicate reached 18.7 &#xb1; 10.0 and 19.0 &#xb1; 11.1 &#x3bc;mol/L, respectively, providing sufficient nutrients for diatom growth. In the bottom water of Region II, a high-value area of PBSi was measured because of the summer-extended Yellow Sea Cold Water Mass, lowering the water temperature to below 15&#xb0;C, which diatoms prefer for growth (<xref ref-type="bibr" rid="B50">Xiao et&#xa0;al., 2018</xref>). In the surface water of Area II, the temperature was similarly lower than that in the other two areas. Under low-temperature conditions, diatom cells successfully divide by developing a tree-like pattern (low silicification), affording high cell density (<xref ref-type="bibr" rid="B19">Javaheri et&#xa0;al., 2015</xref>). As the temperature increases, the algal community shifts from a typical community with both diatoms and dinoflagellates to a community dominated by micro-flagellates (<xref ref-type="bibr" rid="B2">Anderson et&#xa0;al., 1994</xref>).</p>
<p>From the perspective of size-fractionated compositions, PBSi in the 0.8&#x2013;20 &#x3bc;m size fraction predominantly existed in the D, F, and PN sections overall. However, the &gt;20-&#x3bc;m PBSi size fraction predominated in the surface and middle waters in the nearshore of Section F and PN (i.e., region I). Previous studies have shown that the nano-diatoms are the dominant species in ECS, with dominant cells of 2&#x2013;14 &#x3bc;m, resulting in a high BSi content in fraction &lt;16 &#x3bc;m (<xref ref-type="bibr" rid="B49">Wang et&#xa0;al., 2014</xref>). The convergence of the Taiwan Warm Current and freshwater results in water stratification. Coastal and offshore water systems play a crucial role in controlling the composition of phytoplankton particle sizes (<xref ref-type="bibr" rid="B18">Ho et&#xa0;al., 2015</xref>). Small phytoplankton species tend to dominate in the low-nutrient regions of the ocean, whereas large species tend to thrive in nutrient-rich waters (<xref ref-type="bibr" rid="B35">Maranon et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B27">Li, 2002</xref>; <xref ref-type="bibr" rid="B23">Kostadinov et&#xa0;al., 2010</xref>). Chain-formed, small-sized (&lt;20 &#x3bc;m) diatoms have a relatively high surface-area-to-volume ratio, facilitating the absorption of nutrients, particularly phosphates (<xref ref-type="bibr" rid="B22">Karp-Boss et&#xa0;al., 1996</xref>). The ratio at which phytoplankton absorb nitrogen and phosphorus nutrients is 16:1 (Redfield ratio), and phosphorus is a limiting factor that influences phytoplankton growth in most parts of the ECS (<xref ref-type="bibr" rid="B17">Harrison et&#xa0;al., 1990</xref>). The ratio of silicate to nitrogen required for diatom growth is conventionally close to 1 (<xref ref-type="bibr" rid="B7">Brzezinski, 1985</xref>). However, nitrates are depleted first in waters where the silicate/nitrate ratio is &gt;1, and silicates are depleted first in waters where the ratio is &lt;1 (<xref ref-type="bibr" rid="B25">Levasseur and Therriault, 1987</xref>). In our research, most stations had a silicate/nitrate ratio of &lt;1 in the region where PBSi larger than 20 &#x3bc;m dominated, making silicate the limiting factor. The growth of diatoms requires monomeric silicic acid to synthesize their frustules, indicating that the diatoms with large individuals (&gt;20 &#x3bc;m) have a relatively high demand for silicate. However, the region is rich in nutrients with nitrate and silicate, which can provide essential nutrients for the growth of large-sized PBSi. However, as diatoms proliferate further, silicate might be depleted first.</p>
</sec>
<sec id="s4_2">
<label>4.2</label>
<title>Relationship between particulate biogenic silica and particulate organic carbon</title>
<p>The primary mechanism for ocean carbon storage is the action of the &#x201c;biological pump.&#x201d; Diatoms are the most significant contributors to global marine primary productivity, and their growth process involves the utilization of dissolved silica to synthesize their siliceous shells. Thus, the &#x201c;biological carbon pump&#x201d; in the ocean is mainly driven by the &#x201c;biological silica pump.&#x201d; Without silicate limitation, 27 marine diatom cultures yielded an average BSi/POC ratio of 0.13 (<xref ref-type="bibr" rid="B7">Brzezinski, 1985</xref>). The PBSi/POC ratios exceeded 0.3 during algal blooms in the Western Ross Sea and the Weddel-Scotia Sea regions (<xref ref-type="bibr" rid="B44">Tr&#xe9;guer et&#xa0;al., 1988</xref>; <xref ref-type="bibr" rid="B26">Leynaert et&#xa0;al., 1991</xref>). In the investigated area, the values of PBSi/POC ranged from 0.01 to 0.3 in surface waters (<xref ref-type="fig" rid="f8">
<bold>Figure&#xa0;8A</bold>
</xref>). The PBSi/POC values at St.F02 and St.F03 were close to the ratio of PBSi/POC in the pure diatom culture samples. Further, the ratios of PBSi/POC in the sea west of P07 were all greater than 0.13, with the highest value of 0.3 occurring at St.P03, which suggested that this was an area where phytoplankton were dominated by siliceous organisms. We observed that the regions where the PBSi/POC values exceed 0.13 are mainly concentrated in the nearshore areas of the F and PN sections, with a predominance of large-sized (&gt;20 &#x3bc;m) PBSi. Therefore, the differences in PBSi size-fractionated compositions may be one of the reasons for the variations in the PBSi/POC distribution. Large-size diatoms enriched a large amount of dissolved silicate in the water column, resulting in a high PBSi/POC zone. Changes in the particle size or dominant species composition of phytoplankton can lead to differences in Si/C ratios (<xref ref-type="bibr" rid="B44">Tr&#xe9;guer et&#xa0;al., 1988</xref>; <xref ref-type="bibr" rid="B5">Boyd and Newton, 1995</xref>).</p>
<fig id="f8" position="float">
<label>Figure&#xa0;8</label>
<caption>
<p>The ratios of PBSi/POC distribution in the surface <bold>(A)</bold> and bottom <bold>(B)</bold> waters of the investigated area.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g008.tif"/>
</fig>
<p>In the bottom waters, the values of PBSi/POC ranged from 0.02 to 0.29 (<xref ref-type="fig" rid="f8">
<bold>Figure&#xa0;8B</bold>
</xref>). Unlike the distribution of high-value areas in the surface layer, the high-value regions of the bottom layer are mainly concentrated in Section D. The values of PBSi/POC at St.D05, St.D07, and St.D01 were 0.30, 0.24, and 0.22, respectively. The Changjiang Diluted Water extends to the northeast toward the Tsushima/Korea Straits during summer, and the transportation and deposition of organic matter from terrestrial sources might contribute to developing high-value areas. The POC in the ECS is rapidly exported from euphotic waters, and the cross-shelf flux of POC from shelf regions to the open ocean is significant (<xref ref-type="bibr" rid="B53">Zhu et&#xa0;al., 2009</xref>). In Sections F and PN, PBSi/POC ratios showed varying decreases in depth, with the PBSi/POC ratio decreasing to 0.22 at St.P03 and below 0.13 at all other stations. This could reflect the high rates of BSi dissolution or the low rates of organic matter remineralization in the water column. According to the model estimation, approximately 75% of the BSi was dissolved in the water column, and 11% of the BSi was buried in the sediment (<xref ref-type="bibr" rid="B31">Liu et&#xa0;al., 2008</xref>). Particle size directly governs the settling velocity of particles (<xref ref-type="bibr" rid="B4">Berelson, 2001</xref>), and large-particle PBSi (&gt;20 &#x3bc;m) might have higher sinking rates than small-particle PBSi (0.8&#x2013;20 &#x3bc;m).</p>
</sec>
<sec id="s4_3">
<label>4.3</label>
<title>Relationship between particulate biogenic silica and the formation of hypoxia</title>
<p>Hypoxia is defined as DO levels below 2 or 3 mg/L (<xref ref-type="bibr" rid="B14">Diaz, 2001</xref>; <xref ref-type="bibr" rid="B13">Dai et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B11">Chen et&#xa0;al., 2007</xref>). The seasonal hypoxic zone off the Changjiang Estuary is one of the most important ecological problems in China&#x2019;s shelf waters, particularly in August. A trend of the gradual expansion of the hypoxic area has been observed in recent years (<xref ref-type="bibr" rid="B29">Li et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B54">Zhu et&#xa0;al., 2011</xref>). In order to discuss the relationship between PBSi, DO, and POC, we draw plots of PBSi versus DO and PBSi versus POC using all the data collected along sections D, F, and PN (<xref ref-type="fig" rid="f9">
<bold>Figure&#xa0;9</bold>
</xref>). The fitting line shows the negative relationship between PBSi and DO. Spearman&#x2019;s analysis shows a positive correlation between POC and PBSi. Stations P01 and F02 showed bottom hypoxia characteristics, with the bottom DO values distributed as 2.6 and 3.0 mg/L, respectively, and the surface and subsurface DO values in the range of 4.0&#x2013;5.9 mg/L (<xref ref-type="fig" rid="f10">
<bold>Figure&#xa0;10A</bold>
</xref>). The DO saturation of each layer ranged from 16.8% to 39.4%. It is generally believed that water hypoxia is related to water column stratification, as well as oxygen depletion and the decomposition of bottom organic matter. The former is the external physical condition for hypoxia formation, and the latter is the biogeochemical endogenous cause for the formation and development of hypoxia (<xref ref-type="bibr" rid="B21">Justi&#x107; et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B38">Rabalais et&#xa0;al., 2010</xref>). To characterize the vertical variation of Chl <italic>a</italic> and PBSi in water column, the concentrations of Chl <italic>a</italic> and PBSi at St.P01 and St.F02 were analyzed (<xref ref-type="fig" rid="f10">
<bold>Figure&#xa0;10B</bold>
</xref>). At St.F02, PBSi and Chl <italic>a</italic> concentrations both reached maximum values of 2.1 &#x3bc;mol/L and 11.6 &#x3bc;g/L in the surface layer, respectively. Further, with increasing depth, the concentrations of PBSi and Chl <italic>a</italic> decreased sharply, and DO dropped to 3 mg/L. At St.P01, closer to the coast, the values of PBSi and Chl <italic>a</italic> concentrations in the surface layer were 1.7 &#x3bc;mol/L and 0.96 &#x3bc;g/L. Owing to light limitation (<xref ref-type="bibr" rid="B53">Zhu et&#xa0;al., 2009</xref>), surface phytoplankton biomass was not high at St.P01; as the depth increased, the PBSi concentration reached a maximum value of 18.0 &#x3bc;mol/L in the 20-m layer. The bottom water of St.P01 exhibited hypoxic characteristics with a DO value of 2.6. The PBSi (diatom) dissolution is accompanied by DO depletion, and under stratified conditions in the water column, the bacterial degradation of organic substrates accelerates the dissolution of the underlying siliceous cell membranes (<xref ref-type="bibr" rid="B1">Abe et&#xa0;al., 2014</xref>). The phytoplankton of the St.P01 and St.F02 taxa were identified and counted using a light microscope. The proportions of diatom density in the phytoplankton community both occupied an absolute dominance of more than 98% (<xref ref-type="fig" rid="f10">
<bold>Figure&#xa0;10C</bold>
</xref>). The abundance of other phytoplankton species was limited; the combined cell densities of dinoflagellates, haptophytes and chrysophytes accounted for less than 2% of the total. Additionally, the bulk stable isotope compositions (&#x3b4;<sup>13</sup>C) of organic materials have been used to identify the source of organic matter. The &#x3b4;<sup>13</sup>C-POC can discriminate POC sources between marine origins (&#x2212;18&#x2030; to &#x2212;22&#x2030;) and terrestrial origins (&#x2212;23&#x2030; to &#x2212;34&#x2030; from C3 plants and &#x2212;9&#x2030; to &#x2212;17&#x2030; from C4 plants) (<xref ref-type="bibr" rid="B15">Gearing, 1988</xref>; <xref ref-type="bibr" rid="B24">Kumar et&#xa0;al., 2022</xref>). In this study, stable carbon isotope analyses, except the surface of St.P01, revealed that marine phytoplankton predominantly contributed to POC in St.P01 and St.F02. The vertical carbon isotope profiles displayed high consistency, showing less negative &#x3b4;<sup>13</sup>C (&#x2212;20.97&#x2030; to &#x2212;23.11&#x2030;) throughout the water column at St.P01 below 10&#xa0;m and at St.F02 (<xref ref-type="fig" rid="f10">
<bold>Figure&#xa0;10D</bold>
</xref>), indicating the sinking of marine particulate organic matter.</p>
<fig id="f9" position="float">
<label>Figure&#xa0;9</label>
<caption>
<p>Relationships between PBSi and DO <bold>(A)</bold> and correlation between PBSi and POC <bold>(B)</bold>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g009.tif"/>
</fig>
<fig id="f10" position="float">
<label>Figure&#xa0;10</label>
<caption>
<p>Vertical profiles of PBSi, Chlorophyll <italic>a</italic>, and dissolved oxygen concentrations (St.P01 and St.F02). <bold>(A)</bold> Dissolved oxygen concentration in the water column. <bold>(B)</bold> Chlorophyll <italic>a</italic> (blue line) and PBSi (black line) concentrations at St.P01 and St.F02. <bold>(C)</bold> Density ratio of diatoms and dinoflagellates in the water column (Jiang Zhibing, unpubl); the gray shading indicates diatoms, and the black shading indicates dinoflagellates. <bold>(D)</bold> POC carbon isotopes (&#x3b4;<sup>13</sup>C-POC) in the water column of St.P01 and St.F02 (Haiyan Jin, unpubl).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-12-1471650-g010.tif"/>
</fig>
<p>The Changjiang carries a large amount of terrestrial organic matter into the sea; however, land-sourced organic matter is generally a highly degraded product. The organic matter contains a limited quantity of nitrogenous compounds required by oxygen-consuming bacteria, making the organic matter relatively &#x201c;inert&#x201d; with limited oxygen-consumption capabilities (<xref ref-type="bibr" rid="B42">Tan et&#xa0;al., 1991</xref>; <xref ref-type="bibr" rid="B43">Tian et&#xa0;al., 1992</xref>). Resultantly, the formation of hypoxic zones in the bottom layer may have limited contributions from terrestrial organic matter. However, the degradation of a large amount of marine-derived organic matter, caused by the flourishing of phytoplankton, plays a significant role in the formation of hypoxic zones. Previous studies have demonstrated that the proliferation of surface diatoms can contribute 70% to 80% of bottom-layer hypoxia, as estimated based on the silicate release-to-uptake ratio (<xref ref-type="bibr" rid="B47">Wang et&#xa0;al., 2017</xref>). However, the dissolution dynamics of PBSi during sedimentation and its relationship with DO remain poorly understood. In this study, we examined the vertical distribution of PBSi in the water column and its concurrent changes with DO, providing further evidence that PBSi dissolution is accompanied by oxygen depletion during sedimentation. Our findings suggest that the proliferation of diatoms (siliceous phytoplankton) in the upper to middle water layers at stations St.P01 and St.F02 serves as the primary driver of bottom-layer hypoxia, with diatom dissolution during sedimentation closely tied to oxygen consumption.</p>
</sec>
</sec>
<sec id="s5" sec-type="conclusions">
<label>5</label>
<title>Conclusion</title>
<p>This study systematically describes the horizontal distribution of particulate biogenic silica (PBSi) across different size fractions (&gt;20 &#x3bc;m, 0.8&#x2013;20 &#x3bc;m, and total) and its vertical distribution within the water column of the Changjiang Estuary and its adjacent waters during summer. PBSi in the 0.8&#x2013;20 &#x3bc;m size fraction was generally dominant across sections D, F, and PN, while PBSi in the &gt;20 &#x3bc;m fraction was primarily concentrated in the surface and middle waters of nearshore areas in sections F and PN (i.e., Region I). Temperature and nutrient availability were identified as critical factors influencing the size composition and spatial distribution of PBSi. For the first time, this study systematically analyzed the size composition (&gt;20 &#x3bc;m, 0.8&#x2013;20 &#x3bc;m) of PBSi in the Changjiang Estuary and adjacent areas, identified the factors affecting PBSi distribution, and examined the relationships between PBSi, particulate organic carbon (POC), and hypoxia. A more detailed size-fractionated classification provided greater accuracy in revealing the spatial distribution patterns and ecological significance of PBSi. Our findings indicated that high PBSi/POC ratios in the surface layer were predominantly concentrated in the nearshore areas of sections F and PN, with a significant contribution from large-sized (&gt;20 &#x3bc;m) PBSi. However, with increasing depth, the PBSi/POC ratio declined sharply. Large-sized PBSi, which is capable of enriching more silicate and exhibits higher sedimentation rates, underwent substantial degradation during the sedimentation process. The grain-size structure of biogenic silica serves as a reliable indicator of biological pump efficiency. However, due to the lack of data on POC settling flux in this study, we could not address this aspect in detail. Future studies should investigate the relationships between the grain-size structure of phytoplankton populations, POC flux, and biological pump efficiency. Additionally, this study analyzed the spatial variations of dissolved oxygen (DO), PBSi, and &#x3b4;<sup>13</sup>C in the water column at stations St.P01 and St.F02. It confirmed that PBSi dissolution during sedimentation was accompanied by oxygen depletion. The findings highlight that the proliferation of surface diatoms and the associated oxygen consumption during their dissolution in the water column were the main drivers of bottom-layer hypoxia. This study provides new regional evidence to deepen the understanding of the interaction mechanisms between diatoms and hypoxia. In the future, greater attention should be paid to quantifying the relationships between PBSi dissolution, silicate regeneration, and oxygen depletion. Systematic analyses are needed to evaluate the contribution of PBSi to hypoxia formation.</p>
</sec>
</body>
<back>
<sec id="s6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>XL: Writing &#x2013; original draft, Formal analysis, Investigation. BW: Writing &#x2013; review &amp; editing, Formal analysis, Investigation. SC: Resources, Visualization, Writing &#x2013; original draft. HJ: Investigation, Writing &#x2013; review &amp; editing, Methodology. YZ: Investigation, Validation, Writing &#x2013; original draft. ZJ: Formal analysis, Investigation, Writing &#x2013; review &amp; editing. HL: Funding acquisition, Methodology, Supervision, Writing &#x2013; review &amp; editing. JC: Project administration, Writing &#x2013; review &amp; editing, Conceptualization, Resources.</p>
</sec>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This study was supported by the Natural Science Foundation of Zhejiang Province (No. LDT23D06023D06), the Open Research Program of the Key Laboratory of Marine Ecosystem Dynamic (MED), MNR (No. MED202202), the Scientific Research Fund of the Second Institute of Oceanography, MNR (No. SZ2403;JG2213), the Key R&amp;D Program of Zhejiang (No.2023C03011), the National Key Research and Development Program of China (No.2023YFC3108000) and the National Basic Research Program of China (No.2010CB428900).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We would like to thank Prof Zhao Liang&#x2019;s group from ocean university of China for providing the hydrographic data. Thanks to all the staff of the research vessel &#x201c;Dofanghong2&#x201d; for their help during the cruise. We appreciate the data-collection assistants of Yuming Cai, Haiyan Jin, and Zhibing Jiang, all affiliated with the&#xa0;Second Institute of Oceanography, Ministry of Natural Resources, China.</p>
</ack>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
<p>The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2025.1471650/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2025.1471650/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Table1.xlsx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
</sec>
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