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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2023.1270776</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Molecular characterization, spatiotemporal expression patterns of fatty acid elongase (<italic>elovl8</italic>) gene, and its transcription changes in response to different diet stimuli in yellow catfish (<italic>Pelteobagrus fulvidraco</italic>)</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zeng</surname>
<given-names>Wan-Hong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<contrib contrib-type="author">
<name>
<surname>Wei</surname>
<given-names>Xiu-Ying</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
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<contrib contrib-type="author">
<name>
<surname>Qin</surname>
<given-names>Wei</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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<contrib contrib-type="author">
<name>
<surname>Qin</surname>
<given-names>Chuan-Jie</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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<contrib contrib-type="author">
<name>
<surname>Shi</surname>
<given-names>Qiong</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Guo</surname>
<given-names>Sheng-Tao</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1213547"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Prathomya</surname>
<given-names>Panita</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2399299"/>
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<contrib contrib-type="author">
<name>
<surname>Zhang</surname>
<given-names>Shi-Yong</given-names>
</name>
<xref ref-type="aff" rid="aff7">
<sup>7</sup>
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<contrib contrib-type="author">
<name>
<surname>Fu</surname>
<given-names>Peng</given-names>
</name>
<xref ref-type="aff" rid="aff8">
<sup>8</sup>
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</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Hu</surname>
<given-names>Wei</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
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</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Yuan</surname>
<given-names>Han-Wen</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
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</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Wen</surname>
<given-names>Zheng-Yong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1504991"/>
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<aff id="aff1">
<sup>1</sup>
<institution>School of Animal Science, Yangtze University</institution>, <addr-line>Jingzhou</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Key Laboratory of Sichuan Province for Fishes Conservation and Utilization in the Upper Reaches of the Yangtze River, Neijiang Normal University</institution>, <addr-line>Neijiang</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Shenzhen Key Lab of Marine Genomics, Guangdong Provincial Key Lab of Molecular Breeding in Marine Economic Animals, BGI Academy of Marine Sciences, BGI Marine</institution>, <addr-line>BGI, Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Laboratory of Aquatic Genomics, College of Life Sciences and Oceanography, Shenzhen University</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University</institution>, <addr-line>Chengdu</addr-line>, <country>China</country>
</aff>
<aff id="aff6">
<sup>6</sup>
<institution>Department of Animal and Aquatic Sciences, Faculty of Agriculture, Chiang Mai University</institution>, <addr-line>Chiang Mai</addr-line>, <country>Thailand</country>
</aff>
<aff id="aff7">
<sup>7</sup>
<institution>Freshwater Fisheries Research Institute of Jiangsu Province</institution>, <addr-line>Nanjing</addr-line>, <country>China</country>
</aff>
<aff id="aff8">
<sup>8</sup>
<institution>Chongqing Fisheries Science Research Institute</institution>, <addr-line>Chongqing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Yiming Li, Fishery Machinery and Instrument Research Institute, China</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Zhendong Qin, Zhongkai University of Agriculture and Engineering, China; Xiaochen Yuan, Anhui Agricultural University, China</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Wei Hu, <email xlink:href="mailto:huwei19872006@163.com">huwei19872006@163.com</email>; Han-Wen Yuan, <email xlink:href="mailto:hanwen_yuan@126.com">hanwen_yuan@126.com</email>; Zheng-Yong Wen, <email xlink:href="mailto:zhengyong_wen@126.com">zhengyong_wen@126.com</email>
</p>
</fn>
<fn fn-type="equal" id="fn003">
<p>&#x2020;These authors have contributed equally to this work</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>21</day>
<month>09</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>10</volume>
<elocation-id>1270776</elocation-id>
<history>
<date date-type="received">
<day>01</day>
<month>08</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>29</day>
<month>08</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Zeng, Wei, Qin, Qin, Shi, Guo, Prathomya, Zhang, Fu, Hu, Yuan and Wen</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Zeng, Wei, Qin, Qin, Shi, Guo, Prathomya, Zhang, Fu, Hu, Yuan and Wen</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Elongase of very long-chain fatty acid 8 (Elovl8) is a new member identified in the Elovl family that is involved in the synthesis of highly unsaturated fatty acids (HUFAs). However, the evolutionary and physiological roles of this enzyme are still largely unknown. In the present study, the <italic>elovl8</italic> gene was identified and characterized from yellow catfish <italic>Pelteobagrus fulvidraco</italic>, and then its evolutionary and molecular characteristics as well as transcriptional changes in response to various nutritional status were determined. Results showed that the open reading frame (ORF) of <italic>elovl8</italic> was 795 bp in length, encoding a protein of 264 amino acids. Multiple sequences alignment showed that the yellow catfish Elovl8 was highly conserved with other homologs in teleosts, sharing similar structural characteristics (including six conserved transmembrane &#x3b1;-helical domains, four conserved elongase motifs, and three highly conserved cysteine residues). Meanwhile, comparisons of genetic synteny confirmed that the <italic>elovl8</italic> gene identified from the yellow catfish was the homolog of <italic>elovl8b</italic> in other teleosts, and thus, the <italic>elovl8a</italic> gene was lost in the genome of the yellow catfish. Gene structure analysis revealed that the <italic>elovl8b</italic> gene contained eight exons and seven introns, which was highly conserved in teleosts, implying the functional conservation among various fish species. Tissue distribution analysis detected by real-time quantitative PCR (RT-qPCR) showed that the <italic>elovl8</italic> gene was extensively expressed in all detected tissues except eyes, with high expression levels in the intestine and liver. Temporal expression analysis revealed that the expression level of <italic>elovl8</italic> was stably expressed in the early 12&#xa0;h after fertilization, and then dramatically decreased at 24, 48, 72, and 96&#xa0;h after fertilization, implying that <italic>elovl8</italic> is required for HUFA biosynthesis in the early development stages. Functional experiments showed that the expression of the <italic>elovl8</italic> gene was stimulated after feeding with egg yolk but was not obviously affected after feeding with halogenated worms, indicating that diets full of HUFAs can inhibit the expression of <italic>elovl8</italic> in yellow catfish. Our findings will help us to better understand the evolutionary and functional characteristics of <italic>elovl8</italic> in teleosts, and lay a solid basis for investigating the regulation mechanism of HUFA biosynthesis.</p>
</abstract>
<kwd-group>
<kwd>yellow catfish</kwd>
<kwd>
<italic>elovl8</italic>
</kwd>
<kwd>gene cloning</kwd>
<kwd>gene expression</kwd>
<kwd>HUFA biosynthesis</kwd>
</kwd-group>
<counts>
<fig-count count="7"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="40"/>
<page-count count="10"/>
<word-count count="3959"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Aquatic Physiology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Highly unsaturated fatty acids (HUFAs) are a series of straight-chain fatty acids with three or more double bonds and 20 or more carbon atoms, which play important roles in maintaining cell membrane fluidity, regulating fat metabolism, enhancing immunity, and reducing inflammation (<xref ref-type="bibr" rid="B40">Zhang et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B25">Ri et&#xa0;al., 2022</xref>). Notably, eicosapentaenoic acid (EPA, 20:5n-3) and docosahexaenoic acid (DHA, 22:6n-3) are the most prominent HUFAs that play critical roles involved in promoting growth and&#xa0;development, and preventing cardiovascular and neurodevelopmental disorders (<xref ref-type="bibr" rid="B4">De Giuseppe et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B39">Z&#xe1;rate et&#xa0;al., 2017</xref>).</p>
<p>Usually, vertebrates possess the ability to biosynthesize HUFAs by using essential polyunsaturated fatty acids as precursors with two critical rate-limiting enzymes including elongases of very long chain fatty acids (Elovls) and fatty acid desaturases (Fads) (<xref ref-type="bibr" rid="B22">Oboh et&#xa0;al., 2017</xref>). The former can elongate the carbon chain of polyunsaturated fatty acids while the latter can introduce a double bond at a specific position on the carbon chain to produce desaturation (<xref ref-type="bibr" rid="B20">Nakamura and Nara, 2004</xref>; <xref ref-type="bibr" rid="B10">Guillou et&#xa0;al., 2010</xref>). In teleosts, it is commonly accepted that freshwater and migratory fishes have obvious capacity to biosynthesize HUFAs while seawater fishes usually have lower or no capacity to achieve this goal because they are surrounded by an environment with abundant HUFAs in diets (<xref ref-type="bibr" rid="B16">Li et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B14">Jaya-Ram et&#xa0;al., 2011</xref>). Meanwhile, it seems that food habitats also have effects on the HUFA biosynthesis in teleosts. For example, herbivorous or omnivorous freshwater fishes such as grass carp (<xref ref-type="bibr" rid="B5">Du et&#xa0;al., 2006</xref>) and zebrafish (<xref ref-type="bibr" rid="B12">Ishak et&#xa0;al., 2008</xref>) are proved to have the ability to synthesize arachidonic acid (AA), EPA, and DHA with linoleic acid (LA) and linolenic acid (LNA) as precursors. Differently, carnivorous fishes such as groupers (<xref ref-type="bibr" rid="B18">Li et&#xa0;al., 2016</xref>) and gilthead seabream (<xref ref-type="bibr" rid="B6">Ganga et&#xa0;al., 2005</xref>) lack this kind of capacity or have a weak capacity, and thus higher levels of dietary HUFAs are required to meet their requirements for growth, development, and reproduction. However, more studies are still required to investigate the exact mechanisms involved in HUFA biosynthesis in teleosts.</p>
<p>Thus far, seven members named ELOVL1&#x2013;ELOVL7 in the ELOVL family were identified in mammals, and these members showed different substrate specificities for various fatty acid substrates (<xref ref-type="bibr" rid="B13">Jakobsson et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B23">Ohno et&#xa0;al., 2010</xref>). Overall, ELOVL1, ELOVL3, ELOVL6, and ELOVL7 primarily extend saturated fatty acids as well as monounsaturated fatty acids; ELOVL2, ELOVL4, and ELOVL5 mainly catalyze the elongation reactions of polyunsaturated fatty acids, while Elovl4 prolongs both very-long-chain saturated fatty acids and very-long-chain polyunsaturated fatty acids (<xref ref-type="bibr" rid="B1">Agbaga et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B10">Guillou et&#xa0;al., 2010</xref>). Recently, a novel teleost-specific member of the Elovl family, named Elovl8, had been identified in a marine rabbitfish (<italic>Siganus canaliculatus</italic>) (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>). Genetic synteny and gene phylogeny revealed that this new member commonly contains two isoforms, and it seemed that the <italic>elovl8a</italic> gene has been lost in some fish genomes (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>). Further functional experiments indicated that Elovl8b but not Elovl8a possesses the capacity to biosynthesize HUFAs (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>). Consistently, a single <italic>elovl8b</italic> gene was identified in hybrid grouper (<italic>Epinephelus fuscoguttatus</italic> &#x2640; &#xd7; <italic>Epinephelus lanceolatus</italic> &#x2642;), and functional experiments revealed that diets full of HUFAs can inhibit <italic>elovl8b</italic> transcription in liver, suggesting that a negative feedback regulation of the HUFA synthetic pathway existed (<xref ref-type="bibr" rid="B34">Wu et&#xa0;al., 2022</xref>). However, the evolutionary and functional characteristics of this new member are still largely unclear, and much more studies are required to illustrate these issues.</p>
<p>Yellow catfish (<italic>Pelteobagrus fulvidraco</italic>) belongs to family Bagridae, order Siluriformes, and is an omnivorous freshwater fish that is widely cultured in China due to its rapid growth, good taste, and valuable nutrition values (<xref ref-type="bibr" rid="B11">Guo et&#xa0;al., 2023</xref>; <xref ref-type="bibr" rid="B30">Wei et&#xa0;al., 2023</xref>). Thus far, two key genes involved in HUFA biosynthesis including <italic>fad2</italic> and <italic>elovl5</italic> have been identified in yellow catfish (<xref ref-type="bibr" rid="B27">Song et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B24">Qin et&#xa0;al., 2017</xref>), but their exact roles have not been well investigated. In the present study, we identified a teleost-specific <italic>elovl8</italic> gene from yellow catfish, and then its evolutionary and molecular characteristics, spatiotemporal expression patterns, and functional traits were determined for the first time. Our findings will provide not only a novel insight into mechanisms involved in HUFA biosynthesis in yellow catfish, but also valuable data for better understanding the evolutionary and functional traits of <italic>elovl8</italic> in teleosts.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="s2_1">
<title>Fish sampling</title>
<p>Yellow catfish (weight = 32.6 &#xb1; 3.1&#xa0;g) used in this study were purchased from a fishery farm in Sichuan province of China, and fishes were transported to the laboratory and temporarily reared in 1&#xa0;m &#xd7; 1&#xa0;m &#xd7; 1&#xa0;m net boxes set up in a 16-m<sup>2</sup> microfluidic pond. Fishes were reared for 2 weeks in a natural light condition (12 L/12 D), and water temperature was maintained at 24&#x2013;26&#xb0;C. Fishes were fed with commercial feed (approximately 3%&#x2013;4% of body weight) at 19:00 every day as described in our previous studies (<xref ref-type="bibr" rid="B3">Da et&#xa0;al., 2022</xref>). Experimental fishes showed normal feeding and activity during the accumulation period. After that, five fishes were randomly selected and used for tissue distribution studies. Fishes were anesthetized with MS-222 before decapitated, and then tissues including adipose, brain, barbel, eye, gill, gonad, heart, intestine, kidney, liver, muscle, spleen, and stomach were collected. Tissue samples were immediately frozen in liquid nitrogen, and subsequently stored at &#x2212;80&#xb0;C until further utilization.</p>
<p>Meanwhile, fertilized eggs of yellow catfish used in this study were obtained by artificial breeding in our laboratory. During incubation, the development status of yellow catfish embryos was observed with a microscope, and five embryos and larvae were respectively sampled at each time point including 0&#xa0;h, 3&#xa0;h, 6&#xa0;h, 12&#xa0;h, 24&#xa0;h, 36&#xa0;h, 48&#xa0;h, 72&#xa0;h, and 96&#xa0;h after fertilization in the early developmental stages. Similarly, samples were frozen rapidly with liquid nitrogen and then stored at &#x2212;80&#xb0;C for further utilization.</p>
<p>Diets with different content of HUFAs, including <italic>Artemia nauplii</italic> and egg yolk, were separately used as larval stage feeds to investigate the potential effects of various diets on transcription of <italic>elovl8</italic> in yellow catfish. Meanwhile, approximately 200 yellow catfish larvae were randomly selected and fed with different diets on day 4 after hatching, and three parallel experiments were designed for each group. During the experiment, 25% water changes were carried out daily, the oxygenation pump was kept continuously oxygenated, and the dissolved oxygen in the water was maintained above 6 mg/L. Fishes were fed at 08:00, 12:00, 16:00 and 20:00 to ensure sufficient diet supplement in the experimental tanks. The experiment lasted for 3 days, and five fishes from each tank were collected at 24, 48, and 72&#xa0;h after feeding. Finally, samples were immediately frozen in liquid nitrogen and stored at &#x2212;80 &#xb0;C for further utilization.</p>
</sec>
<sec id="s2_2">
<title>Identification of the <italic>elovl8</italic> gene in yellow catfish</title>
<p>Protein similarity BLAST was conducted to identify the genomic and transcriptomic sequences from yellow catfish genome data in NCBI database and transcriptome database using several valid fish Elovl8 protein sequences as queries. Subsequently, potential sequences were verified and confirmed by NCBI-BLAST (<ext-link ext-link-type="uri" xlink:href="https://blast.ncbi.nlm.nih.gov/Blast.cgi">https://blast.ncbi.nlm.nih.gov/Blast.cgi</ext-link>). Meanwhile, specific primers used for cloning experiment were designed with the Primer Premier 5.0 software (<ext-link ext-link-type="uri" xlink:href="http://www.PremierBiosoft.com">www.PremierBiosoft.com</ext-link>) (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table&#xa0;1</bold>
</xref>).</p>
<p>PCR was performed to amplify the aimed <italic>elovl8</italic> gene fragment with liver cDNA as template. Then, PCR products were tested by agarose gel electrophoresis and isolated and purified using the TaKaRa gel recovery kit. Finally, PCR products were cloned into the pMD-19T vector (TaKaRa, Dalian, China) and then sequenced at Sangon Co. Ltd. (Guangzhou, China) to ensure the accuracy of the potential <italic>elovl8</italic> gene in yellow catfish.</p>
</sec>
<sec id="s2_3">
<title>Bioinformatics analysis</title>
<p>The nucleotide sequence of <italic>elovl8</italic> was obtained from yellow catfish using BLAST in the NCBI database (<ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/BLAST">http://www.ncbi.nlm.nih.gov/BLAST</ext-link>). After validation, the nucleotide sequences were translated into protein sequences using the Primer Premier 5.0 software. Multiple Elovl8 protein sequence alignment was conducted by using Clustal X software as described in our previous studies (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>). Meanwhile, comparative analyses of genetic synteny and gene structure were conducted to determine the evolutionary pattern of <italic>elovl8</italic> genes in teleosts. Additionally, a phylogeny was constructed on the basis of the protein sequences of various teleosts to investigate the evolutionary history of the <italic>elovl8</italic> gene family. Elovl8 protein sequences used for phylogeny were downloaded from the NCBI or Ensembl databases. After calculation, JTT + G was selected as the best model, and the neighbor-joining (NJ) method was chosen to construct the phylogenetic tree. Finally, the robustness of the tree topology was assessed by a nonparametric bootstrap analysis with 1,000 resampling replicates. Details of the selected Elovls family proteins are given in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table&#xa0;2</bold>
</xref>.</p>
</sec>
<sec id="s2_4">
<title>RNA extraction and quantitative PCR</title>
<p>Total RNA was extracted with Trizol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer&#x2019;s protocol, and then the concentration and quality of total RNA were confirmed by a spectrophotometer (Nano Drop 2000, Thermo Scientific, USA) as described in our previous studies (<xref ref-type="bibr" rid="B32">Wen et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B31">Wen et&#xa0;al., 2021</xref>). Subsequently, 1 &#x3bc;g of total RNA was reverse transcribed to cDNA using the QuantiTect<sup>&#xae;</sup> Reverse Transcription kit (Takara Biotech, Dalian, China). Quantitative real-time PCR (qPCR) was conducted to measure the mRNA level of rabbitfish <italic>elovl8</italic> on a Light Cycler Real-Time system with a final volume of 20 &#x3bc;L. Meanwhile, the relative expression level of mRNA was normalized with <italic>&#x3b2;-actin</italic> after assessing the stability of five reference genes. Finally, the relative transcription level of <italic>elovl8</italic> was calculated using the Pfaffl method (<xref ref-type="bibr" rid="B36">Yang et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B33">Wen et&#xa0;al., 2019</xref>). Sequences of the specific primers used for qPCRs are provided in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table&#xa0;1</bold>
</xref>.</p>
</sec>
<sec id="s2_5">
<title>Statistical analysis</title>
<p>SPSS 22.0 (IBM, Armonk, NY, USA) and GraphPad Prism 7.0 (GraphPad, Prism Software Inc., San Diego, California) were used for statistical analysis. All data were shown as mean normalized values &#xb1; standard error of the mean (SEM). Significant differences were determined using one-way analysis of variance (ANOVA) followed by Tukey&#x2019;s test, and differences were significant when <italic>p</italic> &lt; 0.05.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>Results</title>
<sec id="s3_1">
<title>Molecular characteristics of the <italic>elovl8</italic> gene in yellow catfish</title>
<p>In the present study, we identified the <italic>elovl8</italic> gene from yellow catfish for the first time. NCBI-Blast revealed that the identified <italic>elovl8</italic> gene is the homolog of <italic>elovl8b</italic> gene in teleost. The open reading frame (ORF) of yellow catfish <italic>elovl8</italic> was 795 bp in length and encoded a protein with 264 amino acids. Multiple Elovl8b protein sequence alignment showed that Elovl8b is highly conserved (protein similarity &gt; 84.4%) in teleosts and that they shared similar structural features, containing six conserved transmembrane &#x3b1;-helix structural domains, four conserved elongase motifs, and three highly conserved cysteine residues (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Multiple protein sequence alignment of Elovl8b between yellow catfish and other representative teleosts. Six conserved transmembrane &#x3b1;-helix structural domains are labeled with I&#x2013;VI. The four conserved elongase motifs are labeled in blue font. Cysteines are shown in red. C-terminal ER retrieval signals are marked with dashed boxes. Asterisks (*) indicate the amino acids conserved among all members of the proteins.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g001.tif"/>
</fig>
</sec>
<sec id="s3_2">
<title>Phylogenetic analysis</title>
<p>To better understand the evolutionary relationships of the <italic>elovl8</italic> gene family in teleosts, a phylogenetic tree was constructed using the NJ method with MEGA-X software. Results showed that the <italic>elovl8</italic> family was divided into two clades, namely, <italic>elovl8a</italic> and <italic>elovl8b</italic> subfamilies, and the yellow catfish <italic>elovl8</italic> was clustered into the <italic>elovl8b</italic> clade (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Notably, red-bellied piranha (<italic>P. nattereri</italic>), chum salmon (<italic>O. keta</italic>), zebrafish (<italic>D. rerio</italic>), Roho labeo (<italic>L. rohita</italic>), fathead minnows (<italic>P. promelas)</italic>, grass carp (<italic>C. idella</italic>), cachama (<italic>C. macropomum</italic>), and delta smelt (<italic>H. transpacificus</italic>) contained two <italic>elovl8</italic> paralogs. Differently, north African catfish (<italic>C. gariepinus</italic>), channel catfish (<italic>I. punctatus</italic>), yellow catfish (<italic>P. fulvidraco</italic>), freshwater shark (<italic>P. hypophthalmus</italic>), southern catfish (<italic>S. meridionalis</italic>), Mexican tetra (<italic>A. mexicanus</italic>), the sharp-headed submarginal fish (<italic>X. texanus</italic>), and the common carp (<italic>C. carpio</italic>) only contained the <italic>elovl8b</italic> subtype (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Moreover, yellow catfish <italic>elovl8b</italic> shared a close relationship with channel catfish and African catfish <italic>elovl8b</italic> (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Phylogeny reveals the evolutionary history of the <italic>elovl8</italic> gene family in teleosts. Protein sequences were used to construct a phylogenetic tree with the NJ method using MEGA-X software. Numbers up the clades represent the bootstrap percentages from 1,000 replicates and the yellow catfish <italic>elovl8</italic> is labeled in red color. The leopard shark (<italic>Stegostoma fasciatum</italic>) was used as the outgroup.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g002.tif"/>
</fig>
</sec>
<sec id="s3_3">
<title>Genetic synteny</title>
<p>Comparative genomics were conducted to further explore the exact evolutionary status of <italic>elovl8</italic> genes in eight representative fishes, namely, <italic>L. rohita</italic>, <italic>C. macropomum</italic>, <italic>C. idella</italic>, <italic>A. mexicanus</italic>, <italic>P. hypophthalmus</italic>, <italic>I. punctatus</italic>, <italic>C. gariepinus</italic>, and <italic>P. fulvidraco</italic> (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>). Results showed that three species, namely, <italic>L. rohita</italic>, <italic>C. macropomum</italic>, and <italic>C. idella</italic>, contained the <italic>elovl8a</italic> gene, and a conserved gene cluster <italic>tesk2</italic>-<italic>toe1</italic>-<italic>selenop2</italic>-<italic>elovl8a</italic>-<italic>zswim5</italic>-<italic>urod</italic> was identified in these fishes (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>). Notably, the <italic>elovl8a</italic> gene had been lost in the other five fish species, namely, <italic>P. fulvidraco</italic>, <italic>I. punctatus</italic>, <italic>C. gariepinus</italic>, <italic>P. hypophthalmus</italic>, and <italic>A. mexicanus</italic> (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>). Moreover, a highly conserved gene cluster <italic>dmap1-guk1b-armh1-mutyh-elovl8b</italic> was identified in all the representative fish genomes (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3B</bold>
</xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Genetic synteny of <italic>elovl8a</italic> <bold>(A)</bold> and <italic>elovl8b</italic> <bold>(B)</bold> in representative fish genomes. The colorful blocks represent different genes. The solid lines represent intergenic regions. The target species in the present study are marked in red front.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g003.tif"/>
</fig>
</sec>
<sec id="s3_4">
<title>Gene structure analysis</title>
<p>Gene structure comparison was conducted to reveal the structural and functional differentiation of the <italic>elovl8b</italic> gene in eight representative fish species. Results showed that the <italic>elovl8b</italic> gene of seven selected fish species, namely, <italic>P. fulvidraco</italic>, <italic>A. mexicanus, C. gariepinus, C. idella, C. macropomum, L. rohita</italic>, and <italic>P. hypophthalmus</italic>, had similar gene structures, containing eight exons and seven introns (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). Differently, the gene structure of <italic>I. punctatus elovl8b</italic> contained nine exons and eight introns, but showed a conserved coding sequence (CDS) region with the seven other fish <italic>elovl8b</italic> genes (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Comparison of the gene structure of <italic>elovl8b</italic> in eight representative teleosts. The colorful blocks and solid lines represent the exons and introns, respectively. UTR and CDS are marked with blue and yellow blocks, respectively.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g004.tif"/>
</fig>
</sec>
<sec id="s3_5">
<title>Tissue distribution pattern of <italic>elovl8</italic> in yellow catfish</title>
<p>The distribution pattern of <italic>elovl8</italic> in yellow catfish was determined by real-time quantitative PCR. Results showed that the <italic>elovl8</italic> gene of yellow catfish was widely expressed in most selected tissues including adipose, barbel, brain, gill, gonad, heart, intestine, kidney, liver, muscle, spleen, and stomach, and relative high expression levels were observed in intestine and liver tissues (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>). Differently, no expression was detected in the eyes (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>).</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Tissue distribution of the <italic>elovl8</italic> gene in yellow catfish. Adipose (Ad); Barbel (Ba); Brain (Br); Eye (Ey); Gill (Gi); Gonad (Go); Heart (He); Intestine (In); Kidney (Ki); Liver (Li); Muscle (Mu); Spleen (Sp); Stomach (St). <italic>&#x3b2;-actin</italic> was selected as the internal reference gene. Data are expressed as mean &#xb1; standard error (<italic>n</italic> = 5).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g005.tif"/>
</fig>
</sec>
<sec id="s3_6">
<title>Expression pattern of the <italic>elovl8</italic> gene at early developmental stages in yellow catfish</title>
<p>Quantitative PCR was conducted to detect the expression level of the <italic>elovl8</italic> gene in the early developmental stages of yellow catfish. Results showed that the expression level was not significantly changed at 0, 3, 6, and 12&#xa0;h, but dramatically decreased at 24, 36, 48, and 72&#xa0;h, and reached the lowest expression level at 96&#xa0;h after fertilization (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>).</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Gene expression pattern of the <italic>elovl8b</italic> gene in the early developmental stage of yellow catfish. <italic>&#x3b2;-actin</italic> was selected as the internal reference gene. Data are expressed as mean &#xb1; standard error (<italic>n</italic> = 5).  Groups that differ significantly are indicated by different lowercase letters above bars.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g006.tif"/>
</fig>
</sec>
<sec id="s3_7">
<title>Effect of different diets on the expression of the <italic>elovl8</italic> gene in yellow catfish</title>
<p>Transcriptional change patterns of the yellow catfish <italic>elovl8b</italic> gene in response to larval stage diets with different HUFA content were determined (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7</bold>
</xref>). Results showed that the expression level of the <italic>elovl8b</italic> gene was slightly increased but not significantly changed at 1, 2, and 3 days after feeding with <italic>A. nauplii</italic> as in yellow catfish (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7A</bold>
</xref>). Differently, the expression level of the <italic>elovl8b</italic> gene was dramatically increased at 2 days and then significantly decreased at 3 days after feeding with egg yolk in yellow catfish (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7B</bold>
</xref>).</p>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>Effect of dietary <italic>A nauplii</italic> <bold>(A)</bold> and egg yolk <bold>(B)</bold> on <italic>elovl8</italic> gene expression in yellow catfish larvae. <italic>&#x3b2;-actin</italic> was selected as the internal reference gene. Data are expressed as mean &#xb1; standard error (<italic>n</italic> = 5).  Groups that differ significantly are indicated by different lowercase letters above bars.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1270776-g007.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<title>Discussion</title>
<p>Elovls are key rate-limiting enzymes to extend the carbon chain of polyunsaturated fatty acids by catalyzing condensation reaction, which play important roles involved in the biosynthesis of HUFAs in animals (<xref ref-type="bibr" rid="B21">Nugteren, 1965</xref>). Thus far, <italic>elovl1&#x2013;elovl7</italic> are widely studied both in vertebrates and in invertebrates, but less is known about <italic>elovl8</italic>, the newly identified member of the <italic>elovl</italic> family (<xref ref-type="bibr" rid="B23">Ohno et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B19">Naganuma et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B9">Gregory and James, 2014</xref>; <xref ref-type="bibr" rid="B35">Yan et&#xa0;al., 2018</xref>). In this study, the <italic>elovl8</italic> gene of the yellow catfish was identified and characterized; it contained a 795- bp-long ORF that encodes a protein of 264 amino acids. Similar results were also observed in rabbitfish (<italic>Siganus canaliculatus</italic>) (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>) and hybrid grouper (<italic>Epinephelus fuscoguttatus&#x2640; &#xd7; Epinephelus lanceolatus&#x2642;</italic>) (<xref ref-type="bibr" rid="B34">Wu et&#xa0;al., 2022</xref>), suggesting that the <italic>elovl8</italic> genes are conserved among different fishes.</p>
<p>Multiple protein sequence comparison showed that yellow catfish Elovl8 possessed all the characteristics of ELOVL protein family members, including four conserved regions (KXXEXXDT, QXXFLHXYHH, NXXXHXXMYXYY, and TXXQXXQ), endoplasmic reticulum (ER)-resident signals, six transmembrane regions, and a histidine cluster (HXXHH) that is involved in fatty acid elongation processes (<xref ref-type="bibr" rid="B13">Jakobsson et&#xa0;al., 2006</xref>). The secondary characteristics are similar to that of Elovl8b in the rabbitfish (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>) and hybrid grouper (<xref ref-type="bibr" rid="B34">Wu et&#xa0;al., 2022</xref>), implying the evolutionary and functional conservation of the Elovl8b among various teleosts.</p>
<p>Phylogenetic analysis showed that the <italic>elovl8</italic> gene family was clustered into two branches of <italic>elovl8a</italic> and <italic>elovl8b</italic> subfamilies, which was consistent with the findings in previous studies, suggesting that teleost-specific elovl8 family may commonly contain two paralogs in teleost genomes, and this phenomenon may be caused by an additional teleost-specific genome duplication (TSGD) event (<xref ref-type="bibr" rid="B15">Kuraku and Meyer, 2009</xref>; <xref ref-type="bibr" rid="B28">Sun et&#xa0;al., 2021</xref>). Genetic synteny further supported teleost lineage, which usually contains <italic>elovl8a</italic> and <italic>elovl8b</italic> isoforms, such as fishes that belong to the orders Cyprinodontiformes, Salmoniformes, and Osmeriformes. However, it seemed that the <italic>elovl8a</italic> gene had been lost in Siluriformes teleosts, including <italic>C. gariepinus</italic>, <italic>P. hypophthalmus</italic>, <italic>I. punctatus</italic>, and <italic>P. fulvidraco</italic>, suggesting that <italic>elovl8b</italic> should be more conserved than <italic>elovl8a</italic>, and thus, the former but not the latter may play important roles in HUFA biosynthesis (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>). To our knowledge, the <italic>elovl8a</italic> gene lost in some teleost genomes may be caused by functional redundancy between <italic>elovl8a</italic> and <italic>elovl8b</italic> isoforms in the early period of evolution. In addition, the structure of the <italic>elovl8b</italic> gene commonly contained eight exons and seven introns in teleosts, suggesting that this gene was highly conserved and might play similar functions among various teleosts.</p>
<p>Tissue distribution experiments showed that <italic>elovl8b</italic> was widely expressed in various tissues with high expression levels in liver and intestine, which was different with rabbitfish and hybrid grouper (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B34">Wu et&#xa0;al., 2022</xref>), indicating that the tissue distribution pattern of <italic>elovl8b</italic> is species-specific and it may play diverse roles in various teleosts. Indeed, this phenomenon may be caused by the different ability to synthesize HUFAs in different fishes (<xref ref-type="bibr" rid="B8">Gong et&#xa0;al., 2014</xref>). Notably, the <italic>elovl8b</italic> was highly expressed in liver in most teleosts, suggesting that this gene may also play similar roles in HUFA biosynthesis because liver is the major organ that is involved in HUFA production.</p>
<p>The gene expression pattern of the <italic>elovl8b</italic> gene during the early development stage of yellow catfish was also determined, and results showed that <italic>elovl8b</italic> was stably expressed within 12&#xa0;h after fertilization, which was slightly different with other HUFA biosynthesis-related genes in rabbitfish (<xref ref-type="bibr" rid="B38">You et&#xa0;al., 2017</xref>), suggesting that HUFA biosynthesis is very important for the early development of embryo despite the fact that the pattern may be different among various species. However, the expression level of yellow catfish <italic>elovl8</italic> was significantly decreased from 24&#xa0;h to 96&#xa0;h. It has been shown that during the early stage of embryonic development in yellow catfish, the PUFAs in yolk are involved in metabolism and catabolism to provide energy preparation for embryonic development, with C18:2n-6, C20:4n-3, and DHA dominating (<xref ref-type="bibr" rid="B37">Yao et&#xa0;al., 2009</xref>). Interestingly, the <italic>elovl8b</italic> gene was shown to have the ability to prolong C18 (18:2n-6, 18:3n-3, and 18:4n-3) and C20 (20:4n-6 and 20:5n-3) HUFAs to long-chain polyunsaturated fatty acids (LC-HUFAs) in rabbitfish (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>). This expression pattern suggests that yellow catfish <italic>elovl8</italic> is also involved in the synthesis of long-chain polyunsaturated fatty acids and plays an important role in early embryonic development.</p>
<p>Previous studies have shown that diets full of HUFAs could inhibit the transcriptional expression in rabbitfish and hybrid grouper (<xref ref-type="bibr" rid="B17">Li et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B34">Wu et&#xa0;al., 2022</xref>). In the present study, functional experiments showed that the transcription of <italic>elovl8</italic> was not significantly affected by feeding with <italic>A. salina</italic>, whereas it was inhibited after feeding with egg yolk in yellow catfish. It is shown that the lack of HUFAs in <italic>A. salina</italic> might explain why dietary <italic>A. salina</italic> slightly increased <italic>elovl8</italic> gene expression (<xref ref-type="bibr" rid="B29">Tocher et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B7">Garcia et&#xa0;al., 2008</xref>). Meanwhile, dietary egg yolk induced but then inhibited <italic>elovl8</italic> expression, which may be caused by the high content of phospholipid in egg yolk. Our findings further supported the idea that a compensatory mechanism also existed in yellow catfish, which was similar to previous reports and could demonstrate a key role for <italic>elovl8b</italic> in LC-PUFA biosynthesis (<xref ref-type="bibr" rid="B2">Cho et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B26">Seiliez et&#xa0;al., 2001</xref>).</p>
<p>In summary, an <italic>elovl8</italic> gene was identified and characterized from yellow catfish for the first time. Multiple protein sequence alignment, genetic synteny, gene structure comparisons, and phylogeny revealed that <italic>elovl8a</italic> had been lost in Siluriformes, and <italic>elovl8b</italic> was highly conserved among various teleosts. Moreover, spatiotemporal expression analyses suggested that <italic>elovl8</italic> was widely distributed, and it could play important roles in the early development stage in yellow catfish. Finally, functional experiments showed that a diet full of HUFAs may inhibit the transcription of <italic>elovl8</italic> in yellow catfish. Our findings will help us to better understand the evolutionary and functional characteristics of <italic>elovl8</italic> in teleosts, and lay a solid basis for investigating the regulation mechanism of HUFA biosynthesis.</p>
</sec>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>.</p>
</sec>
<sec id="s6" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The animal study was approved by Neijiang Normal University Animal Care and Use Committee. The study was conducted in accordance with the local legislation and institutional requirements.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>W-HZ: Formal Analysis, Investigation, Writing &#x2013; original draft. X-YW: Writing &#x2013; original draft, Formal Analysis, Investigation, Software. WQ: Writing &#x2013; original draft, Investigation. C-JQ: Writing &#x2013; review &amp; editing. QS: Writing &#x2013; review &amp; editing. SG: Writing &#x2013; review &amp; editing, Formal Analysis, Software. PP: Software, Writing &#x2013; review &amp; editing. SZ: Writing &#x2013; review &amp; editing, Funding acquisition, Investigation. PF: Writing &#x2013; review &amp; editing, Formal Analysis, Investigation. WH: Methodology, Supervision, Writing &#x2013; review &amp; editing. H-WY: Supervision, Writing &#x2013; review &amp; editing. Z-YW: Funding acquisition, Methodology, Project administration, Supervision, Writing &#x2013; review &amp; editing.</p>
</sec>
</body>
<back>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>This work was financially supported by the Research Fund from Key Laboratory of Sichuan Province for Fishes Conservation and Utilization in the Upper Reaches of the Yangtze River (No. NJTCSC23-3), the Natural Science Fund of Sichuan Province of China (No. 2023NSFSC1221), the Project of Sichuan Provincial Department of Science and Technology (No. 2021YFYZ0015), the Cooperation Fund from Sichuan University (No. 2022H013), and the Important New Varieties Selection Project of Jiangsu Province (No. PZCZ201742).</p>
</sec>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2023.1270776/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2023.1270776/full#supplementary-material</ext-link>
</p>
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