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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2023.1252540</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Effects of the harmful alga <italic>Margalefidinium</italic> (aka <italic>Cochlodinium</italic>) <italic>polykrikoides</italic> on clearance rates of the hard clam, <italic>Mercenaria mercenaria</italic>
</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>de Silva</surname>
<given-names>Darren</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/2387376"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Gobler</surname>
<given-names>Christopher J.</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/18082"/>
</contrib>
</contrib-group>
<aff id="aff1">
<institution>School of Marine and Atmospheric Sciences, Stony Brook University</institution>, <addr-line>Southampton, NY</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Jose Luis Iriarte, Austral University of Chile, Chile</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Gustaaf Marinus Hallegraeff, University of Tasmania, Australia; Yoonja Kang, Chonnam National University, Republic of Korea</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Christopher J. Gobler, <email xlink:href="mailto:christopher.gobler@stonybrook.edu">christopher.gobler@stonybrook.edu</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>28</day>
<month>08</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>10</volume>
<elocation-id>1252540</elocation-id>
<history>
<date date-type="received">
<day>03</day>
<month>07</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>03</day>
<month>08</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 de Silva and Gobler</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>de Silva and Gobler</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Harmful algal blooms (HABs) such as those formed by the ichthyotoxic dinoflagellate<italic>, Margalefidinium</italic> (aka <italic>Cochlodinium</italic>) <italic>polykrikoides</italic> can have adverse effects on bivalves. While <italic>M. polykrikoides</italic> has caused significant die offs of bivalves and other marine organisms, the Northern quahog or hard clam, <italic>Mercenaria mercenaria</italic>, is comparatively more resistant to this HAB. This study quantified clearance rates of juvenile hard clams (10-20 mm) exposed to three different North American populations of <italic>M. polykrikoides</italic> (bloom, strain CP1, strain CPSB-1G) as well as the nonharmful cryptophyte, <italic>Rhodomonas salina</italic> and the nonharmful dinoflagellate, <italic>Gymnodinium aureolum</italic>, in single and mixed algal exposures. Multiple biovolume exposures with <italic>M. polykrikoides</italic> bloom water and <italic>R. salina</italic> (1,000, 1,500, 3,000 cells mL<sup>-1</sup> <italic>M. polykrikoides</italic> biovolume equivalent) were completed to assess the effects of increasing biomass on hard clam clearance rates and selection. Hard clams opened and actively cleared algal mixtures at and below 1,000 <italic>M. polykrikoides</italic> cells mL<sup>-1</sup>. During single species exposures, strain CPSB-1G and <italic>R. salina</italic> were cleared significantly faster than wild <italic>M. polykrikoides</italic> populations and strain CP1. During mixed exposures, <italic>R. salina</italic> was cleared significantly faster than CPSB-1G but not other <italic>M. polykrikoides</italic> populations and there was no difference between hard clam clearance rates of <italic>G. aureolum</italic> and <italic>R. salina</italic>. Clearance rates of <italic>M. polykrikoides</italic> at &#x2265;1,500 cells mL<sup>-1</sup> <italic>M. polykrikoides/R. salina</italic> mixtures were not significantly different than zero unlike clearance of those at &lt;1,000 cells mL<sup>-1</sup> indicating a density dependent effect of blooms. Collectively, the results demonstrate that hard clams can actively clear <italic>M. polykrikoides</italic> cells at moderate (&#x2264;1,000 cells mL<sup>-1</sup>) but not elevated (&gt; 1,000 cells mL<sup>-1</sup>) bloom densities. Given this, and the documented survival of hard clams during blooms, <italic>M. mercenaria</italic> may be candidate for aquaculture and restoration in regions prone to HABs caused by <italic>M. polykrikoides</italic>.</p>
</abstract>
<kwd-group>
<kwd>harmful algal blooms (HABs)</kwd>
<kwd>
<italic>Margalefidinium</italic> (<italic>Cochlodinium</italic>) <italic>polykrikoides</italic>
</kwd>
<kwd>hard clam</kwd>
<kwd>
<italic>Mercenaria mercenaria</italic>
</kwd>
<kwd>bivalve</kwd>
<kwd>clearance rates</kwd>
</kwd-group>
<counts>
<fig-count count="6"/>
<table-count count="1"/>
<equation-count count="1"/>
<ref-count count="94"/>
<page-count count="13"/>
<word-count count="7772"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Marine Fisheries, Aquaculture and Living Resources</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Bivalve shellfish hold a key position in marine food webs (<xref ref-type="bibr" rid="B72">Officer et&#xa0;al., 1982</xref>; <xref ref-type="bibr" rid="B1">Abeels et&#xa0;al., 2012</xref>). As filter feeders, they are able to clear the water of phytoplankton and other particulates, thereby decreasing water turbidity (<xref ref-type="bibr" rid="B12">Coen et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B89">Wall et&#xa0;al., 2008</xref>). Important submerged aquatic vegetation, such as macroalgae and sea grasses, can benefit from the removal of phytoplankton and particulates by bivalves (<xref ref-type="bibr" rid="B12">Coen et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B89">Wall et&#xa0;al., 2008</xref>). Some bivalves, such as oysters, can also provide critical habitat by forming reefs composed of aggregations of live individuals (<xref ref-type="bibr" rid="B71">Newell, 2004</xref>; <xref ref-type="bibr" rid="B12">Coen et&#xa0;al., 2007</xref>). These aggregations provide habitat for many juvenile fish and invertebrates to hide from predators (<xref ref-type="bibr" rid="B12">Coen et&#xa0;al., 2007</xref>). Similarly, bivalve shells can provide habitat to other organisms that rely on hard substrate (<xref ref-type="bibr" rid="B87">Tolley and Volety, 2005</xref>) and promote survival and growth of early life stage bivalves and other calcifying organisms (<xref ref-type="bibr" rid="B16">Curtin et&#xa0;al., 2022</xref>). In addition to their ecological value, shellfish are commercially valuable (<xref ref-type="bibr" rid="B28">Lellis-Dibble et al., 2008</xref>). Coastal communities and countries around the world have a history of benefitting economically from shellfisheries along with having an integrated maritime culture based on harvesting and growing shellfish leading to millions of dollars in landings (<xref ref-type="bibr" rid="B28">Lellis-Dibble et al., 2008</xref>). Bivalve shellfish represent a $2B USD industry in the US (<xref ref-type="bibr" rid="B25">Ekstrom et&#xa0;al., 2015</xref>), a multi-million dollar industry on Long Island alone and are known to provide natural filtration for shallow embayed areas (<xref ref-type="bibr" rid="B11">Cerrato et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B28">Lellis-Dibble et al., 2008</xref>). Restoration efforts have been implemented to promote shellfish population recovery from anthropogenically-caused population declines, such as hard clam spawning sanctuaries in Great South Bay and Shinnecock Bay, NY (<xref ref-type="bibr" rid="B18">Doall et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B32">Gobler et&#xa0;al., 2022</xref>).</p>
<p>Harmful algal blooms (HABs) are an increasing threat to coastal areas causing environmental, ecological, and economic damage worldwide (<xref ref-type="bibr" rid="B95">Zingone and Enevoldsen, 2000</xref>; <xref ref-type="bibr" rid="B42">Haigh and Esenkulova, 2014</xref>). HAB species can range from toxin producers, species harmful to marine biota, and/or blooms that lead to hypoxia and/or coastal acidification (<xref ref-type="bibr" rid="B95">Zingone and Enevoldsen, 2000</xref>; <xref ref-type="bibr" rid="B2">Anderson et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B66">Levin et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B38">Griffith and Gobler, 2020</xref>). HABs are promoted by natural and anthropogenic conditions, with excessive nutrient loading and climate change being primary drivers (<xref ref-type="bibr" rid="B48">Heisler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B33">Gobler et&#xa0;al., 2017</xref>). <italic>Margalefidinium Cochlodinium (a.k.a. Cochlodinium) polykrikoides</italic> is a HAB species that is globally distributed and has expanded during the past three decades (<xref ref-type="bibr" rid="B63">Kudela and Gobler, 2012</xref>; <xref ref-type="bibr" rid="B36">Griffith et&#xa0;al., 2019a</xref>). <italic>M. polykrikoides</italic> is a naked, chain-forming dinoflagellate which enhances its motility (<xref ref-type="bibr" rid="B29">Fraga, 1989</xref>; <xref ref-type="bibr" rid="B83">Smayda and Reynolds, 2003</xref>), helps to maintain surface positions in warmer waters (<xref ref-type="bibr" rid="B29">Fraga, 1989</xref>), and deters grazers (<xref ref-type="bibr" rid="B54">Jiang et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B52">Jiang et&#xa0;al., 2010</xref>). <italic>M. polykrikoides</italic> can outcompete other phytoplankton through allelopathy, specifically through the production of reactive oxygen species (ROS) that cause significant mortality in a wide range of marine organisms, including shellfish and finfish (<xref ref-type="bibr" rid="B57">Kim et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B56">Kim et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B86">Tang and Gobler, 2010</xref>). ROS on a cellular level can cause DNA damage, denature enzymes, and lead to the destruction of membrane integrity (<xref ref-type="bibr" rid="B15">Cunningham and Capone, 1992</xref>; <xref ref-type="bibr" rid="B73">Okamoto and Colepicolo, 1998</xref>). In addition to ROS production, <italic>M. polykrikoides</italic> may also have significant toxic effects through the production of extracellular polysaccharides (<xref ref-type="bibr" rid="B58">Kim et&#xa0;al., 2002</xref>). ROS production and extracellular mucus secretion lead to asphyxiation of fish through either direct damage to the gill lamellae by lipid peroxidation or by smothering through this extracellular polysaccharide secretion (<xref ref-type="bibr" rid="B56">Kim et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B43">Hallegraeff et&#xa0;al., 2017</xref>). These effects may be exacerbated during <italic>M. polykrikoides</italic> blooms due to their ability to vertically migrate within the water column (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B60">Kim et&#xa0;al., 2010</xref>). By utilizing high light levels, congregating at high densities in surface waters during the day and migrating to the benthos at night (<xref ref-type="bibr" rid="B14">Cullen, 1985</xref>; <xref ref-type="bibr" rid="B60">Kim et&#xa0;al., 2010</xref>) <italic>M. polykrikoides</italic> can negatively impact benthic organisms including shellfish as well as pelagic finfish (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>).</p>
<p>HABs, including <italic>M. polykrikoides</italic>, have led to the collapse of some bivalve fisheries (<xref ref-type="bibr" rid="B8">Bricelj and Kuenstner, 1989</xref>) and can affect bivalves in different ways depending on the bivalve species and life stage (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B39">Griffith et&#xa0;al., 2019b</xref>; <xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>). Some adult bivalves can experience mortality or possible gonadal depression when exposed to HABs (<xref ref-type="bibr" rid="B7">Bricelj et&#xa0;al., 2005</xref>) and accumulate high levels of toxins (<xref ref-type="bibr" rid="B95">Zingone and Enevoldsen, 2000</xref>). Compared to their adult counterparts, larval and juvenile bivalves are typically more susceptible to HABs (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B68">Li et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B39">Griffith et&#xa0;al., 2019b</xref>). <italic>M. polykrikoides</italic> in particular can be highly toxic and lethal to early life stage bivalves and have been shown to cause mortality in larval and juvenile <italic>Crassostrea virginica</italic> (eastern oyster) and <italic>Argopecten irradians</italic> (bay scallop) (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B68">Li et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B39">Griffith et&#xa0;al., 2019b</xref>). This HAB can cause gill tissue hyperplasia along with hemorrhaging that has led to mortality in juvenile bivalves (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>). In addition, larval and juvenile bivalve mortality increases when they are exposed to greater <italic>M. polykrikoides</italic> cell densities and are exposed for longer periods of time (<xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B68">Li et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>). The specific growth phase of this dinoflagellate can also influence bivalve mortality with stationary phase being less toxic than exponential phase (<xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>). Although gill tissue degradation in multiple bivalve species has been a major cause in mortality of juvenile bivalves (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>), species-specific responses to <italic>M. polykrikoides</italic> may also lead to greater stress on vulnerable populations (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>). Hardier species such as <italic>Mercenaria mercenaria</italic> (hard clam) and <italic>Crassostrea virginica</italic> (eastern oyster) have displayed lower mortality compared to more sensitive species such as <italic>Argopecten irradians</italic> (bay scallop) (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>).</p>
<p>Bivalves can selectively feed on certain species of phytoplankton based on nutritional value, size, biochemical cues, and toxicity (<xref ref-type="bibr" rid="B70">Newell and Jordan, 1983</xref>; <xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B26">Espinosa et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B27">Espinosa et&#xa0;al., 2010</xref>). There are three areas where bivalves can selectively distinguish particles in their bodies; the ctenidia, the palps, and the gut (<xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B93">Ward and Shumway, 2004</xref>). There can be preferential clearance upon the ctenidia, and gills, by the bivalve closing or retracting their incurrent siphon or selectively clearing certain species out of the water (<xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B91">Ward et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B3">Baker, 1998</xref>; <xref ref-type="bibr" rid="B93">Ward and Shumway, 2004</xref>; <xref ref-type="bibr" rid="B22">Dunphy et&#xa0;al., 2006</xref>). Preferential clearance on the ctenidia will be addressed in this project as it has been observed in studies with several algal species present (<xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B91">Ward et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B3">Baker, 1998</xref>; <xref ref-type="bibr" rid="B92">Ward et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B93">Ward and Shumway, 2004</xref>; <xref ref-type="bibr" rid="B22">Dunphy et&#xa0;al., 2006</xref>). The exact mechanism for selective clearance/particle sorting is still debated with some studies showing that it depends on the size of particles while others indicate it depends on particle composition (<xref ref-type="bibr" rid="B67">Levinton et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B93">Ward and Shumway, 2004</xref>; <xref ref-type="bibr" rid="B22">Dunphy et&#xa0;al., 2006</xref>). To date, no study has quantified the ability of juvenile bivalves to clear <italic>M. polykrikoides</italic>. Identifying the sensitivity of bivalve clearance to <italic>M. polykrikoides</italic> can improve the understanding of their threshold to major bloom events.</p>
<p>The objective of this study was to identify the effects of <italic>M. polykrikoides</italic> on clearance rates of juvenile hard clams, <italic>Mercenaria mercenaria</italic>. Wild bloom populations collected from Shinnecock Bay and Peconic Bay, both historical locations of <italic>M. polykrikoides</italic> blooms, along with cultured <italic>M. polykrikoides</italic> were used in these experiments. Juvenile hard clams (<italic>M. mercenaria</italic>) ranging from 10-20 mm in length were used in experimental trials to assess size class dependent clearance rates. Wild and cultured <italic>M. polykrikoides</italic> were used to identify how they each affect clearance rate of ecologically and economically important bivalve species. Cultured <italic>Gymnodinium aureolum</italic>, a nonharmful dinoflagellate, and <italic>Rhodomonas salina</italic>, a nonharmful cryptophyte, were used to compare juvenile bivalve clearance rate of non-toxic dinoflagellates and nanoplankton that mimicked the size and swimming behavior respectively, of <italic>M. polykrikoides</italic> in phytoplankton assemblages. These experiments were completed to address the following questions: (1) How does exposure to monospecific blooms and assemblages of <italic>M. polykrikoides</italic> affect clearance rates?, (2) How does exposure to <italic>M. polykrikoides</italic> within mixed assemblages of phytoplankton affect clearance rates?, and (3) How do changes in the total seston load/bloom density of <italic>M. polykrikoides</italic> in the water column affect juvenile hard clam clearance rates?</p>
</sec>
<sec id="s2">
<title>Methods</title>
<sec id="s2_1">
<title>Algal cultures</title>
<p>Clonal cultures of <italic>M. polykrikoides</italic> were used for clearance rate experiments along with cultured <italic>R. salina</italic> and <italic>G. aureolum</italic>. <italic>M. polykrikoides</italic> cultures that were isolated from bloom water samples included strain CP1 from Flanders Bay, NY, in 2006 (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>) and strain CPSB-1G from Shinnecock Bay, NY, in 2010. Both strains have been shown to be harmful to bivalve and fish larvae (<xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B37">Griffith and Gobler, 2016</xref>), but have not yet been used to study their impact on bivalve clearance. <italic>G. aureolum</italic> (strain GymMHC-23) was isolated from Meetinghouse Creek, a tributary within Peconic Bay, NY and confirmed via sequencing of the 28S rRNA gene, and <italic>R. salina</italic> CCMP 1319 was provided by the National Center for Marine Algae (NCMA). <italic>Gymnodinium aureolum</italic> (Hulburt) G Hansen 2000, is different and distinct from the ichthyotoxic North European <italic>Gyrodinium aureolum</italic> which is now <italic>Karenia mikimotoi</italic>. While <italic>R. salina, G. aureolum</italic>, and <italic>M. polykrikoides</italic> differ in cellular diameter (15, 40, and 35 &#xb5;m, respectively), hard clams are capable of clearing particles greater than 5 &#xb5;m in diameter (<xref ref-type="bibr" rid="B77">Riisg&#xe5;rd, 1988</xref>) up to at least 200 &#xb5;m (<xref ref-type="bibr" rid="B79">Riisg&#xe5;rd and Larsen, 2010</xref>).</p>
<p>All cultures were maintained in sterile GSe medium with a salinity of ~32, made with boiled and 0.2 &#x3bc;m filtered seawater (<xref ref-type="bibr" rid="B19">Doblin et&#xa0;al., 1999</xref>), and held at 21&#xb0; C in an incubator that provided a light intensity of ~100 &#xb5;mol m<sup>-2</sup> s<sup>-2</sup> with a 12 h light: 12 h dark photoperiod. Cultures were allowed to grow until they reached exponential growth phase to avoid any differences in toxicity amongst strains (<xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>). Concentrations of all species and strains were quantified via flow cytometry using a Beckman Coulter CytoFLEX, imaging light microscopy using a Keyence BZ-X800, or hand counts through light microscopy.</p>
</sec>
<sec id="s2_2">
<title>Bloom water collection</title>
<p>Wild populations of <italic>M. polykrikoides</italic> from blooms were also used in this study to compare to laboratory grown cultures. Bloom water was obtained from regions that have a history of <italic>M. polykrikoides</italic> blooms (e.g. Peconic Bay and Shinnecock Bay). Sampling for bloom water took place opportunistically from July through September of 2020 and 2021. At each site, 20L of surface bloom water was collected in polyethylene carboys and physical parameters (water temperature, salinity, and dissolved oxygen) were measured with a YSI ProPlus probe. Although not monospecific, <italic>M. polykrikoides</italic> blooms constituted a majority of <italic>M. polykrikoides</italic> microscopically identified cells in the samples (&gt;75%). Bloom water was used within a day of collection and diluted with UV-sterilized 1-&#x3bc;m filtered water from Old Fort Pond, Shinnecock Bay if too dense (&gt;3,000 cells mL<sup>-1</sup>) for the purposes of these experiments. The strongly allelopathic nature of <italic>M. polykrikoides</italic> blooms reduces the presence of other, larger phytoplankton in bloom water (<xref ref-type="bibr" rid="B86">Tang and Gobler, 2010</xref>; <xref ref-type="bibr" rid="B61">Koch et&#xa0;al., 2014</xref>), minimizing their potential impact on experimental outcomes.</p>
</sec>
<sec id="s2_3">
<title>Juvenile hard clams</title>
<p>Juvenile clams (~10-20 mm) were hatchery spawned from wild brood stock. All individuals were held in a sea table with recirculating filtered (1 &#x3bc;m) Old Fort Pond seawater at experimental temperatures (~21&#xb0;C) while being fed mixed live algae (<italic>M. muelleri, P. lutheri, R. salina, T. lutea</italic>) for at least one week before being used for clearance rate experiments (<xref ref-type="bibr" rid="B49">Helm et&#xa0;al., 2004</xref>). Bivalves were starved 24 h prior to conducting experiments to ensure some individuals opened during experiments (<xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>).</p>
</sec>
<sec id="s2_4">
<title>Clearance rate experiments</title>
<p>Juvenile bivalve clearance rates of <italic>M. polykrikoides</italic>, <italic>G. aureolum</italic>, and <italic>R. salina</italic> clearance rates were calculated using the clearance method (<xref ref-type="bibr" rid="B78">Riisg&#xe5;rd, 2001</xref>). In the clearance method, clearance rate is measured as the volume of water cleared of suspended particles per unit of time. The reduction in the number of particles as a function of time is monitored by taking water samples at fixed time intervals and measuring the particle concentration. Clearance rate experiments were established using 250 mL glass beakers placed on multi-position magnetic stir plates (details below). For all experimental algal exposures (differing species and food levels), there were three control beakers with phytoplankton only and ten experimental beakers with bivalves of the same algal diet per treatment. Single species exposure experiments were completed to address question 1 where cultured and bloom <italic>M. polykrikoides</italic> concentrations represented bloom and sub-bloom concentrations: 1,000 cells mL<sup>-1</sup>, 750 cells mL<sup>-1</sup>, 500 cells mL<sup>-1</sup>, and 250 cells mL<sup>-1</sup> (<xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>). The highest concentration for experiments using cultured <italic>M. polykrikoides</italic> was 1,000 cells mL<sup>-1</sup> which was limited by the density of scaled-up 4-liter cultures (&lt;3,000 cells mL<sup>-1</sup>) that could be produced. Preliminary data (personal obs.) suggested that clams would cease to clear at 1,000 cells mL<sup>-1</sup> although was not observed throughout this study. To address question 2, clonal culture CPSB-1G was used for <italic>M. polykrikoides</italic>, <italic>R. salina</italic> mixed culture experiments. Past studies have demonstrated that the clonal culture, CPSB-1G was of similar toxicity when compared to the clonal culture CP1 (<xref ref-type="bibr" rid="B94">Yang et&#xa0;al., 2022</xref>). Mixed culture experiments normalized at the 1,000 <italic>M. polykrikoides</italic> cell mL<sup>-1</sup> biovolume level using five different proportions: (0 dinoflagellate, 0.25 dinoflagellate, 0.5 dinoflagellate, 0.75 dinoflagellate, or complete dinoflagellate) and <italic>R. salina</italic> was used to fulfill the remaining 0.75, 0.5, or 0.25 of cells present respectively. The experimental set up was identical for experiments with <italic>G. aureolum</italic> and <italic>R. salina</italic> with cell densities normalized to <italic>M. polykrikoides</italic> biovolume equivalent (i.e. &#x3bc;m<sup>3</sup>). To address question 3, several experiments using wild populations of <italic>M. polykrikoides</italic> at densities greater than 1,000 cells mL<sup>-1</sup> with <italic>R. salina</italic> present were completed to observe behavior and clearance rates of juvenile clams when exposed to denser blooms.</p>
<p>Experimental beakers (250 mL) used for clearance rate experiments were gently homogenized using a 1 inch stir bar rotating at 60 rpm. One bivalve was placed on a plastic mesh platform in each beaker, keeping them ~2 cm above the stir bar. Bivalves were allowed to clear for one hour once they opened and/or extended their siphon. Duplicate samples were taken from each beaker once the bivalve opened and after the one-hour period. Samples were used to quantify concentrations of each algal species present, one preserved with 10% glutaraldehyde for flow cytometric quantification and the other with Lugol&#x2019;s iodine for imaging or hand quantification using microscopy. Clearance rates were calculated using the equation below (<xref ref-type="bibr" rid="B13">Coughlan, 1969</xref>):</p>
<disp-formula>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:mtext>CR</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mtext>V</mml:mtext>
<mml:mo stretchy="false">/</mml:mo>
<mml:mtext>nt</mml:mtext>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
<mml:mtext>&#xa0;</mml:mtext>
<mml:mo stretchy="false">(</mml:mo>
<mml:mtext>ln</mml:mtext>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:msub>
<mml:mtext>C</mml:mtext>
<mml:mn>0</mml:mn>
</mml:msub>
<mml:mo stretchy="false">/</mml:mo>
<mml:msub>
<mml:mtext>C</mml:mtext>
<mml:mi>t</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:mtext>ln</mml:mtext>
<mml:mo stretchy="false">(</mml:mo>
<mml:msub>
<mml:mtext>C</mml:mtext>
<mml:mn>0</mml:mn>
</mml:msub>
<mml:mo>&#x2032;</mml:mo>
<mml:mo stretchy="false">/</mml:mo>
<mml:msub>
<mml:mtext>C</mml:mtext>
<mml:mtext>t</mml:mtext>
</mml:msub>
<mml:mo>&#x2032;</mml:mo>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</disp-formula>
<p>Where V is the volume of water in the container, n is the number of bivalves present (n = 1), t is time (1 hour), C<sub>0</sub> is the initial concentration of algae, C<sub>t</sub> is the concentration of algae after bivalves have been open for one hour, C<sub>0</sub>&#x2032; is the initial concentration of algae for the control, and C<sub>t</sub>&#x2032; is the concentration after one hour. Clearance rate quantification was normalized to the dry weight of each bivalve individual allowing for a weight-based comparison between experiment types (<xref ref-type="bibr" rid="B44">Harke et&#xa0;al., 2011</xref>). Dry weights were obtained by removing all soft tissue from individual bivalves and keeping them in a drying oven for at least 48 hours before weighing them again on a balance. Changes in the cell densities of the control beakers were used to adjust the clearance rate of each replicate correcting for any loss of cells in the vessel.</p>
</sec>
<sec id="s2_5">
<title>Quantification of algal cells</title>
<p>Algal concentration was quantified via flow cytometry using a Beckman Coulter CytoFLEX, imaging light microscopy using a Keyence BZ-X800, or light microscopy. Flow cytometry employed the allophycocyanin (APC) channel with a 660/20 bandpass filter to obtain counts for live and preserved <italic>G. aureolum</italic>, and <italic>R. salina</italic> cells. Samples for both <italic>M. polykrikoides</italic> strains and bloom water were counted via light microscopy and imaging light microscopy to obtain total counts and distinguish between single cells and double/triple/quadruple chains.</p>
</sec>
<sec id="s2_6">
<title>Statistical analyses</title>
<p>Statistical analyses were performed using RStudio<sup>&#xae;</sup> statistical software (version 4.0.3). Outliers consisting of unrealistic clearance rates for juvenile clams (&gt;50 L hr<sup>-1</sup> g<sup>-1</sup>) were removed prior to analyses. To address unbalanced distributions and heterogenous variances bootstrap two-way and three-way ANOVAs were used to identify significant differences in clearance rates between varying densities, strains, and biovolumes of <italic>M. polykrikoides</italic> and species of algae. Beyond unbalanced distributions and heterogenous variances, bootstrapping requires minimal assumptions about normality and it allows statistical inferences to be drawn regarding whole population based on a limited data set (<xref ref-type="bibr" rid="B23">Efron, 1992</xref>). When significant differences were detected, a bootstrap Tukey&#x2019;s honest significant difference test (Tukey&#x2019;s HSD) was performed on the bootstrapped data to identify specific differences between groups. Additionally, bootstrap one-sample t-tests with a Bonferroni correction for type 1 errors were completed on clearance rate data for each group during all experiments to identify whether clearance rates were significantly different than zero. All assumptions were met for all statistical models. Bootstrap ANOVAs were performed using the lmboot package (<xref ref-type="bibr" rid="B23">Efron, 1992</xref>), bootstrap one-sample t-tests were completed using the MKinfer package (<xref ref-type="bibr" rid="B24">Efron, 1994</xref>), and Tukey&#x2019;s HSD post-hoc comparison tests were completed using the boot package. Results for Tukey&#x2019;s HSD tests are displayed in representative box plots via compact letter display where in groupings are based on significant differences (&#x3b1; = 0.05).</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>Results</title>
<p>Across all experiments, there was no detectable difference of hard clams altering opening and closing behavior when exposed to different strains or densities of <italic>M. polykrikoides</italic> with and without <italic>R. salina</italic> present. In contrast, clearance rates varied amongst different strains, species, and densities of algae.</p>
<sec id="s3_1">
<title>Single species exposures</title>
<p>For the single algal species experiments, clearance rates were significantly different across the different phytoplankton populations (<italic>p</italic>&lt;0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Hard clams cleared the clonal strain CPSB-1G faster than <italic>M. polykrikoides</italic> bloom water and the clonal CP1 strain (<italic>p</italic>&lt;0.05; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Additionally, hard clams cleared <italic>R. salina</italic> faster than the CP1 strain (<italic>p</italic>&lt;0.05; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Hard clam clearance rates of <italic>R. salina</italic> were not significantly different from clearance of CPSB-1G (<italic>p</italic>&gt; 0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>) but were marginally faster than the clearance of <italic>M. polykrikoides</italic> bloom water (<italic>p</italic>=0.07; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Hard clam clearance rates of the clonal strain CP1 were not significantly different than the clearance of <italic>M. polykrikoides</italic> bloom water (<italic>p</italic>&gt;0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Hard clam clearance rates of CP1(&#x3b1;&#x2032; = 0.0125, <italic>p=</italic>0.484; t-test) and bloom water were not significantly different than zero (&#x3b1;&#x2032; = 0.0125, <italic>p=</italic>0.186; t-test). Clearance rates for all single algal species exposures did not differ across cell densities examined (250 &#x2013; 1,000 cells mL<sup>-1</sup>; <italic>p</italic>=0.163; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Clearance rates of <italic>M. mercenaria</italic> during single algal species exposures of <italic>M. polykrikoides</italic> bloom water, <italic>M. polykrikoides</italic> clonal isolates (CP1 &amp; CPSB1-G) and <italic>R. salina</italic> at four densities (250, 500, 750 &amp; 1000 cells mL<sup>-1</sup> <italic>M. polykrikoides</italic> biovolume equivalent). Letters next to each algal population in figure legend indicates significantly different groups based on results of Tukey&#x2019;s HSD tests. Boxes display the interquartile range (IQR) of each data set while bars within each box represent the median value. Whiskers represent the maximum and minimum for each data set if there are no possible outliers. Points past the whiskers display any possible outliers (true maximum or minimum) within the data.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1252540-g001.tif"/>
</fig>
</sec>
<sec id="s3_2">
<title>Mixed culture/bloom exposures</title>
<p>Clearance rates were significantly different as a function of phytoplankton population present (<italic>p</italic>&lt;0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). During the <italic>M. polykrikoides</italic> bloom water/<italic>R. salina</italic> (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) mixture experiments, clearance of <italic>M. polykrikoides</italic> bloom water was not significantly different than clearance rates of <italic>R. salina</italic> (<italic>p</italic>&gt;0.05; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>), and clearance of <italic>M. polykrikoides</italic> bloom water was significantly greater than zero (&#x3b1;&#x2032; = 0.0125, <italic>p&lt;</italic>0.0125; t-test). In contrast, clearance rates of strain CPSB-1G were significantly slower than those of <italic>R. salina</italic> when the two algae were present together (<italic>p</italic>&lt;0.05; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). During the <italic>G. aureolum/R. salina</italic> (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>) mixture experiments hard clam clearance of the two species was not significantly different (<italic>p</italic>&gt;0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>). Similar to the single species exposures, there were no significant differences in clearance rates across the different proportions of dinoflagellates in the algal mixtures (25-75%; %; <italic>p</italic>&gt;0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2</bold>
</xref>, <xref ref-type="fig" rid="f3">
<bold>3</bold>
</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Clearance rates of <italic>M. mercenaria</italic> during mixed algal species exposures of <italic>M. polykrikoides</italic> bloom water with cultured <italic>R. salina</italic> and clonal isolate CPSB-1G with <italic>R. salina</italic> at different proportions of <italic>M. polykrikoides</italic> (0.25, 0.5, &amp; 0.75) in the algal mixture. Each treatment was normalized to 1,000 cells mL<sup>-1</sup> <italic>M. polykrikoides</italic> biovolume equivalent. Letters next to each algal population in figure legend indicates significantly different groups based on results of Tukey&#x2019;s HSD tests. Boxes display the interquartile range (IQR) of each data set while bars within each box represent the median value. Whiskers represent the maximum and minimum for each data set if there are no possible outliers. Points past the whiskers display any possible outliers (true maximum or minimum) within the data.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1252540-g002.tif"/>
</fig>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Clearance rates of <italic>M. mercenaria</italic> during mixed algal species exposures of cultured <italic>G. aureolum</italic> with <italic>R. salina</italic> at different proportions of <italic>G. aureolum</italic> (0.25, 0.5, 0.75) in the algal mixture. Each treatment was normalized to 1,000 cells mL<sup>-1</sup> <italic>M. polykrikoides</italic> biovolume equivalent. Letters next to each algal population in figure legend indicates significantly different groups based on results of Tukey&#x2019;s HSD tests. Boxes display the interquartile range (IQR) of each data set while bars within each box represent the median value. Whiskers represent the maximum and minimum for each data set if there are no possible outliers. Points past the whiskers display any possible outliers (true maximum or minimum) within the data.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1252540-g003.tif"/>
</fig>
</sec>
<sec id="s3_3">
<title>Single versus mixed species comparisons</title>
<p>Hard clam clearance rates of <italic>M. polykrikoides</italic> within bloom water and CPSB-1G clonal cultures during single and mixed species exposures were compared. Clearance rates differed as a function of single versus mixed species exposures (<italic>p</italic>=0.08), but not across differing <italic>M. polykrikoides</italic> densities (<italic>p</italic>=0.196) and algal populations (<italic>p</italic>=0.275; bootstrap three-way ANOVA, <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). More specifically, clearance rates of mixed species were marginally higher than single species exposures (<italic>p</italic>=0.08; bootstrap three-way ANOVA, <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Clearance rates of <italic>M. mercenaria</italic> during single species exposures of <italic>M. polykrikoides</italic> bloom water and cultured clonal isolate CPSB-1G, and mixed algal species exposures of <italic>M. polykrikoides</italic> bloom water with cultured <italic>R. salina</italic> and CPSB-1G with <italic>R. salina</italic>. Boxes display the interquartile range (IQR) of each data set while bars within each box represent the median value. Whiskers represent the maximum and minimum for each data set if there are no possible outliers. Points past the whiskers display any possible outliers (true maximum or minimum) within the data.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1252540-g004.tif"/>
</fig>
<p>Hard clam clearance rates of <italic>R. salina</italic> cells as a single species, mixed with CPSB-1G, and mixed within bloom water were compared. Clearance rates differed as a function of algal mixture (<italic>p&lt;</italic>0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>) but not as a function of proportions of <italic>M. polykrikoides</italic> within the mixtures (<italic>p&gt;</italic>0.05; bootstrap two-way ANOVA, <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>). Clearance rates of <italic>R. salina</italic> were significantly slower when it was mixed with bloom water compared to <italic>R. salina</italic> clearance rates when mixed with CPSB-1G or <italic>R. salina</italic> alone <italic>(p</italic>&lt;0.05; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>). In contrast, clearance rates of <italic>R. salina</italic> as a uni-algal suspension or mixed with CPSB-1G were not significantly different (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>).</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Clearance rates of <italic>M. mercenaria</italic> during single species exposures of <italic>R. salina</italic> and mixed algal exposures of R. salina with <italic>M. polykrikoides</italic> bloom water and cultured clonal isolate CPSB-1G. Letter next to each algal population in figure legend are results of Tukey&#x2019;s HSD tests. Letters next to each algal population in figure legend indicates significantly different groups based on results of Tukey&#x2019;s HSD tests. Boxes display the interquartile range (IQR) of each data set while bars within each box represent the median value. Whiskers represent the maximum and minimum for each data set if there are no possible outliers. Points past the whiskers display any possible outliers (true maximum or minimum) within the data.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1252540-g005.tif"/>
</fig>
</sec>
<sec id="s3_4">
<title>Varying biovolume exposures</title>
<p>Clearance rates differed as a function of biovolume of phytoplankton (<italic>p</italic>&lt;0.05; bootstrap three-way ANOVA, <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>) but not as a function of proportions of <italic>M. polykrikoides</italic> and differing algal species (<italic>p</italic>&gt;0.05; bootstrap three-way ANOVA, <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>). Additionally, interactive effects between biovolume and proportions of <italic>M. polykrikoides</italic> led to significantly different clearance rates (<italic>p</italic>&gt;0.05; bootstrap three-way ANOVA, <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>). Clearance rates at 1,000 cells mL<sup>-1</sup> were not significantly different from the other two biovolume experiments (<italic>p</italic>&gt;0.05; bootstrap Tukey&#x2019;s HSD, <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>). <italic>M. polykrikoides</italic> clearance rates at 1,500 cells mL<sup>-1</sup> and 3,000 cells mL<sup>-1</sup> were not significantly different than zero (&#x3b1;&#x2032; = 0.0083, <italic>p&gt;</italic>0.0083; t-test, <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>). <italic>R. salina</italic> clearance rates were not significantly different than zero at 3,000 cells mL<sup>-1</sup>(<italic>p&gt;</italic>0.0083) but were significantly greater than zero at 1,500 cells mL<sup>-1</sup> (&#x3b1;&#x2032; = 0.0083, <italic>p&lt;</italic>0.0083; t-test, <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>).</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Clearance rates of <italic>M. mercenaria</italic> during mixed algal species exposures of <italic>M. polykrikoides</italic> bloom water with cultured R. salina at three different <italic>M. polykrikoides</italic> biovolume equivalent levels (1,000, 1,500, &#x2213; 3,000 cells mL-1). Letters within boxes for each biovolume level indicates significantly different groups based on results of Tukey&#x2019;s HSD tests. Boxes display the interquartile range (IQR) of each data set while bars within each box represent the median value. Whiskers represent the maximum and minimum for each data set if there are no possible outliers. Points past the whiskers display any possible outliers (true maximum or minimum) within the data.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1252540-g006.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<title>Discussion</title>
<p>During this study, hard clam clearance rate of <italic>M. polykrikoides</italic> varied as a function of algal populations, biomass level, and single versus mixed species exposures. There were substantial differences in hard clam clearance between some clonal strains of <italic>M. polykrikoides</italic> and bloom water suggesting clams and possibly other bivalves have strain-specific tolerances to this toxic alga. CPSB-1G strain was cleared at the highest rate amongst <italic>M. polykrikoides</italic> strains, being significantly higher than both CP1 and <italic>M. polykrikoides</italic> bloom water and matching the clearance of <italic>R. salina</italic>, a beneficial cryptophyte. Mixed algal assemblages slightly altered this relationship as the presence of CPSB-1G with <italic>R. salina</italic> yielded higher clearance of <italic>R. salina</italic>, yet the clearance of CPSB-1G in single species and mixed species exposures (with <italic>R. salina</italic>) were not different. Mixing <italic>R. salina</italic> into <italic>M. polykrikoides</italic> bloom water highlighted that <italic>R. salina</italic> clearance was significantly reduced in the presence of the harmful alga. In addition, clearance rates of <italic>M. polykrikoides</italic> bloom water at 1,500 cells mL<sup>-1</sup> and higher were not significantly different than zero. Collectively, this variance in clearance rates across strains, single versus mixed species assemblages, and total biovolume exposure provide insight into hard clam behavior in the presence of <italic>M. polykrikoides</italic> and has implications for the resilience of <italic>M. mercenaria</italic> populations and aquaculture to this HAB.</p>
<sec id="s4_1">
<title>
<italic>M. polykrikoides</italic> toxicity and mechanisms affecting clearance rates</title>
<p>The dynamic nature of clearance rates of juvenile hard clams exposed to different strains of <italic>M. polykrikoides</italic> supports the need for multifaceted, unique approaches to understand the toxicity of this alga. <italic>M. polykrikoides</italic> is known to be toxic due to the production of ROS (superoxide anion, hydrogen peroxide, hydroxyl radical) and perhaps extracellular polysaccharides (<xref ref-type="bibr" rid="B57">Kim et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B58">Kim et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B59">Kim et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>). Significant mortality events during HABs caused by <italic>M. polykrikoides</italic> have been observed across multiple taxa including finfish (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B20">Dorantes-Aranda et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>), shellfish (<xref ref-type="bibr" rid="B59">Kim et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B68">Li et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>), reef building corals (<xref ref-type="bibr" rid="B41">Guzm&#xe1;n et&#xa0;al., 1990</xref>; <xref ref-type="bibr" rid="B5">Bauman et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B76">Richlen et&#xa0;al., 2010</xref>), copepods (<xref ref-type="bibr" rid="B53">Jiang et&#xa0;al., 2011</xref>), and shrimp (<xref ref-type="bibr" rid="B75">P&#xe9;rez-Morales et&#xa0;al., 2017</xref>). Specifically, <italic>M. polykrikoides</italic> can also cause rapid mortality of larval stages of northwest Atlantic bivalves (<xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>; <xref ref-type="bibr" rid="B37">Griffith and Gobler, 2016</xref>). In addition, it has been demonstrated that <italic>M. polykrikoides</italic> has species-specific effects on juvenile bivalves where a combination of bloom vertical migration, bloom duration, temperature, and inability for sessile fauna to evade blooms can lead to mortalities in <italic>Crassostrea virginica</italic> (eastern oyster; (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B68">Li et&#xa0;al., 2012</xref>)), <italic>Argopecten irradians</italic> (bay scallop; (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>)), and <italic>Mytilus</italic> spp. (mussel species; (<xref ref-type="bibr" rid="B17">Curtiss et&#xa0;al., 2008</xref>)). In contrast, <italic>M. mercenaria</italic> (hard clam) has proven to be more resilient to this HAB, surviving dense blooms that have caused mortality or reduced growth rates in other bivalves such as <italic>M. virginica</italic> and <italic>A. irradians</italic> (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>). Here, bivalve clearance rates were quantified to understand how <italic>M. polykrikoides</italic> might alter the behavior of these animals.</p>
<p>Bivalve clearance of HABs has been studied for a number of algal taxa with clearance rates varying between bivalve and algal species (<xref ref-type="bibr" rid="B6">Bricelj et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B47">Hegaret et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B44">Harke et&#xa0;al., 2011</xref>). Studies have been performed to address the effects of other toxins and harmful compounds, such as exposure to ROS produced by HABs on survival or clearance rate of bivalves (<xref ref-type="bibr" rid="B51">Jeong et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B47">Hegaret et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B85">Tang and Gobler, 2009b</xref>). Similar to the findings of this study, bivalves have been shown to clear <italic>M. polykrikoides</italic> at various rates (<xref ref-type="bibr" rid="B51">Jeong et&#xa0;al., 2004</xref>). Specifically, <xref ref-type="bibr" rid="B51">Jeong et&#xa0;al. (2004)</xref> demonstrated that mussel larvae can successfully clear <italic>M. polykrikoides</italic> cells from the water column after two weeks of development. Like all invertebrates, hard clams do not have acquired immunity and are limited to innate immunity through cellular response using hemocytes (<xref ref-type="bibr" rid="B50">Janeway, 1994</xref>). They also have an open circulatory system where particulates that are being taken in from the environment come into direct contact with clam hemolymph (<xref ref-type="bibr" rid="B50">Janeway, 1994</xref>; <xref ref-type="bibr" rid="B46">Hegaret, 2008</xref>). During a study by <xref ref-type="bibr" rid="B46">Hegaret (2008)</xref>, the ROS-producing alga <italic>Heterosigma akashiwo</italic> displayed loss of shape and complexity and increased mortality as hard clam hemocytes engulfed cells through phagocytosis and use of an enzymatic chemical agent released by the hemocyte cells when hard clam hemolymph was exposed to <italic>H. akashiwo</italic>. Although <italic>H. akashiwo</italic> has cytotoxic properties that led to increased hard clam hemocyte death, suppressed phagocytosis, and increased apoptosis, hard clam hemocytes were the main drivers of harmful algal cell death in <italic>H. akashiwo</italic> and other HABs when compared to other bivalve hemocytes (<xref ref-type="bibr" rid="B46">Hegaret, 2008</xref>). <italic>M. polykrikoides</italic> cells may have a similar fate when cleared by juvenile hard clams.</p>
<p>The <italic>M. polykrikoides</italic> strain, CPSB-1G was cleared at rates similar to the nonharmful food source, <italic>R. salina</italic>, in single alga experiments while the CP1 strain and <italic>M. polykrikoides</italic> bloom populations were not cleared, suggesting possible hard clam resilience to a variety of <italic>M. polykrikoides</italic> strains and toxicities. Although hard clams have lower clearance rates than Eastern oysters and mussels (<xref ref-type="bibr" rid="B10">Bricelj and Malouf, 1984</xref>; <xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>; <xref ref-type="bibr" rid="B65">Leverone et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B44">Harke et&#xa0;al., 2011</xref>) they seem to display greater resistance to the effects of <italic>M. polykrikoides</italic> (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>). Historically, hard clam populations have experienced mass die offs in response to some HABs, particularly those caused by <italic>Aureococcus anophagefferens</italic> (<xref ref-type="bibr" rid="B34">Gobler et&#xa0;al., 2005</xref>). In scenarios where hard clam populations have been restored to high densities or experimentally enhanced, this bivalve has been shown to clear the harmful brown tide alga at densities&lt;10<sup>5</sup> cells mL<sup>-1</sup> (<xref ref-type="bibr" rid="B6">Bricelj et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B11">Cerrato et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B44">Harke et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B32">Gobler et&#xa0;al., 2022</xref>).</p>
<p>While <italic>M. polykrikoides</italic> is a well-known toxic alga, there is variation in toxicity between strains of different origins (<xref ref-type="bibr" rid="B58">Kim et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B90">Wang et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B94">Yang et&#xa0;al., 2022</xref>), temperatures (<xref ref-type="bibr" rid="B37">Griffith and Gobler, 2016</xref>), and cellular growth stage (<xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B37">Griffith and Gobler, 2016</xref>). During this study, clams successfully cleared multiple strains of <italic>M. polykrikoides</italic> although the rates at which each strain was cleared varied, in some cases significantly. Clams cleared the clonal strain CPSB-1G faster than the CP1 strain and wild populations when exposed to each as monocultures. While in mixed assemblages with the non-harmful alga, <italic>R. salina</italic>, clearance of this non-harmful alga was faster than the clearance of CPSB-1G. Several possible scenarios regarding strain toxicity may be responsible for variation in clearance of <italic>M. polykrikoides</italic> strains and <italic>R. salina</italic>. The strain CPSB-1G has been shown to be similarly ichthyotoxic as strain CP1 (<xref ref-type="bibr" rid="B94">Yang et&#xa0;al., 2022</xref>). However, during this study, clams cleared CPSB-1G significantly faster than CP1, suggesting that clam clearance is not affected in the same manner as fish survival perhaps because the potentially toxic effects of this alga only manifest once a cell is physically in contact with the clam digestive tract (<xref ref-type="bibr" rid="B80">Rosa et&#xa0;al., 2018</xref>). We further note that there was large variance in the clearance rates of clams feeding on wild populations (e.g. <xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>) and that this variation could have been driven by differing toxicity of bloom water collected from different sites on different dates (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). It has been established that particle selection by bivalves is partly mediated by cell-surface lectins which differ across differing algal species and strains (<xref ref-type="bibr" rid="B26">Espinosa et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B27">Espinosa et&#xa0;al., 2010</xref>). While this was not addressed in this study, it is possible that the noxious nature of <italic>M. polykrikoides</italic> and its production of ROS result in the post-consumption rejection of cells as pseudo-feces (<xref ref-type="bibr" rid="B92">Ward et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B93">Ward and Shumway, 2004</xref>; <xref ref-type="bibr" rid="B69">Mafra et&#xa0;al., 2009</xref>) with the subsequent fate of the algal cells (reemergence, cysts formation, death) unknown.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Experimental design and details of algae used for clearance rate experiments using juvenile hard clams (<italic>M. mercenaria</italic>).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center">Figure #</th>
<th valign="middle" align="center">Exposure Type</th>
<th valign="middle" align="center">Species</th>
<th valign="middle" align="center">Exposure densities (<italic>M. polykrikoides</italic> biovolume equivalent (cells mL&#xaf;&#xb9;))</th>
<th valign="middle" align="center">Exposure Treatments (Dinoflagellate proportion per treatment)</th>
<th valign="middle" align="center">Total Biovolume per Treatment (<italic>M. polykrikoides</italic> biovolume equivalent (cells mL&#xaf;&#xb9;))</th>
<th valign="middle" align="center">Location(s)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">Single Species</td>
<td valign="middle" align="center">
<italic>M. polykrikoides</italic> CP1</td>
<td valign="middle" align="center">250, 500, 750, 1000</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">1, 4</td>
<td valign="middle" align="center">Single Species</td>
<td valign="middle" align="center">
<italic>M. polykrikoides</italic> CPSB-1G</td>
<td valign="middle" align="center">250, 500, 750, 1000</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">1, 4</td>
<td valign="middle" align="center">Bloom water</td>
<td valign="middle" align="center">Wild <italic>M. polyrikikoides</italic>
</td>
<td valign="middle" align="center">250, 500, 750, 1000</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">Sag Harbor and Old Fort Pond</td>
</tr>
<tr>
<td valign="middle" align="center">1, 5</td>
<td valign="middle" align="center">Single Species</td>
<td valign="middle" align="center">
<italic>R. salina</italic>
</td>
<td valign="middle" align="center">250, 500, 750, 1000</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">2, 5</td>
<td valign="middle" align="center">Mixed Species</td>
<td valign="middle" align="center">CPSB-1G, <italic>R. salina</italic>
</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">0.25, 0.5, 0.75, 1</td>
<td valign="middle" align="center">1,000</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">3</td>
<td valign="middle" align="center">Mixed Species</td>
<td valign="middle" align="center">
<italic>G. aureolum, R. salina</italic>
</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">0.25, 0.5, 0.75, 1</td>
<td valign="middle" align="center">1,000</td>
<td valign="middle" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="middle" align="center">2, 4, 5</td>
<td valign="middle" align="center">Bloom water/Mixed Species</td>
<td valign="middle" align="center">Wild <italic>M. polykrikoides, R. salina</italic>
</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">0.25, 0.5, 0.75, 1</td>
<td valign="middle" align="center">1,000</td>
<td valign="middle" align="center">Old Fort Pond</td>
</tr>
<tr>
<td valign="middle" align="center">6</td>
<td valign="middle" align="center">Bloom water/Mixed Species</td>
<td valign="middle" align="center">Wild <italic>M. polykrikoides, R. salina</italic>
</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">0.25, 0.5, 0.75, 1</td>
<td valign="middle" align="center">1,500</td>
<td valign="middle" align="center">Old Fort Pond</td>
</tr>
<tr>
<td valign="middle" align="center">6</td>
<td valign="middle" align="center">Bloom water/Mixed Species</td>
<td valign="middle" align="center">Wild <italic>M. polykrikoides, R. salina</italic>
</td>
<td valign="middle" align="center">&#x2013;</td>
<td valign="middle" align="center">0.25, 0.5, 0.75, 1</td>
<td valign="middle" align="center">3,000</td>
<td valign="middle" align="center">Flanders Bay and Old Fort Pond</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Beyond variation in toxicity due to genetic origin and biogeochemical parameters, the toxicity of clonal isolates of harmful algae can change over time (<xref ref-type="bibr" rid="B88">Villac et&#xa0;al., 1993</xref>; <xref ref-type="bibr" rid="B4">Bates, 1998</xref>; <xref ref-type="bibr" rid="B6">Bricelj et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B30">Furey et&#xa0;al., 2007</xref>). Although clonal strains are typically exposed to uniform conditions, toxin and or harmful compound concentrations can vary over time in culture as has been seen, for example, in the diatom <italic>Pseudo-nitzschia</italic> for which genetic changes, changes in the bacterial composition, and/or a lack of sexual reproduction (<xref ref-type="bibr" rid="B88">Villac et&#xa0;al., 1993</xref>; <xref ref-type="bibr" rid="B4">Bates, 1998</xref>) can cause a decrease in cellular toxin levels in as little as one year in culture (<xref ref-type="bibr" rid="B88">Villac et&#xa0;al., 1993</xref>). <italic>Aureococcus</italic> and <italic>Alexandrium</italic> are HABs that have also displayed decreases in toxicity in culture over time (<xref ref-type="bibr" rid="B9">Bricelj et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B55">Juhl et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B44">Harke et&#xa0;al., 2011</xref>). In contrast, regarding <italic>Karenia brevis</italic>, the &#x201c;Wilson clone&#x201d; has significantly higher brevetoxin production after six decades in of culture when compared to other more recently isolated strains (<xref ref-type="bibr" rid="B64">Lekan and Tomas, 2010</xref>). These toxicity changes in culture are consistent with the hypothesis that CPSB-1G and CP1 clones of <italic>M. polykrikoides</italic> may produce ROS at different rates and at rates that differ from prior studies (e.g. <xref ref-type="bibr" rid="B84">Tang and Gobler, 2009a</xref>; <xref ref-type="bibr" rid="B94">Yang et&#xa0;al., 2022</xref>)) and, therefore, were cleared at different rates by <italic>M. mercenaria</italic> (this study). This would be consistent with the more rapid clearance of strain CPSB-1G compared to wild populations and strain CP1, suggesting that overtime CPSB-1G had become less noxious compared to populations in the wild.</p>
<p>There were clear signs during this study that <italic>M. polykrikoides</italic> altered the feeding of <italic>M. mercenaria</italic>. While hard clam clearance of <italic>R. salina</italic> was not significantly different than CPSB-1G during single species exposure, clams cleared the cryptophyte significantly faster than <italic>M. polykrikoides</italic> during mixed algal treatments. This difference highlights the ability of hard clams to selectively clear non-harmful, beneficial algal species (<xref ref-type="bibr" rid="B92">Ward et&#xa0;al., 1998</xref>; <xref ref-type="bibr" rid="B93">Ward and Shumway, 2004</xref>; <xref ref-type="bibr" rid="B69">Mafra et&#xa0;al., 2009</xref>). In comparison, when the similar sized, nontoxic dinoflagellate <italic>G. aureolum</italic> was present with <italic>R. salina</italic>, hard clam clearance rates did not differ between the two species, emphasizing the noxious nature of <italic>M. polykrikoides</italic> relative to this non-harmful dinoflagellate. Similarly, the clearance of <italic>R. salina</italic> by the clams was significantly slower when mixed with <italic>M. polykrikoides</italic> bloom water compared to when the HAB was not present. The reduction in clearance rates of the cryptophyte may be due to higher exposure levels of ROS, extracellular polysaccharides, and other cytotoxic compounds mentioned previously (<xref ref-type="bibr" rid="B58">Kim et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B46">Hegaret, 2008</xref>; <xref ref-type="bibr" rid="B94">Yang et&#xa0;al., 2022</xref>). Finally, hard clams did not clear <italic>M. polykrikoides</italic> bloom water during single species exposures but when mixed with <italic>R. salina</italic>, they did successfully clear <italic>M. polykrikoides</italic>, highlighting possible facilitation of <italic>M. polykrikoides</italic> clearance by the nonharmful alga.</p>
<p>Allelopathy is the inhibition of one photosynthetic organism by another, and <italic>M. polykrikoides</italic> has been shown to be a strongly allelopathic HAB, likely due to the production of ROS (<xref ref-type="bibr" rid="B86">Tang and Gobler, 2010</xref>; <xref ref-type="bibr" rid="B94">Yang et&#xa0;al., 2022</xref>). Unlike toxicity amongst HABs that produce saxitoxin (<xref ref-type="bibr" rid="B7">Bricelj et&#xa0;al., 2005</xref>) and domoic acid (<xref ref-type="bibr" rid="B4">Bates, 1998</xref>), ROS are produced and exuded by actively growing <italic>M. polykrikoides</italic> cells and can have inhibitory effects on target algae in minutes-to-hours (<xref ref-type="bibr" rid="B86">Tang and Gobler, 2010</xref>). Prior studies on the allelopathic effects of <italic>M. polykrikoides</italic> have shown that <italic>R. salina</italic> is more resistant than other phytoplankton species but can still experience significant mortality after 24 h exposure to high densities of <italic>M. polykrikoides</italic> (2,400 cells mL<sup>-1</sup>; <xref ref-type="bibr" rid="B86">Tang and Gobler (2010)</xref>). During the present study, <italic>R. salina</italic> cells were alive and swimming in co-cultures with <italic>M. polykrikoides</italic> over the course of the 1-hour clearance rate experiments although signs of deformation and aggregation of some cells were observed. While such morphological changes may have altered clearance rates in mixed cultures, more work is needed to understand the quantitative impact of such changes. Culture experiments with ROS scavenging enzymes could provide additional insight on hard clam clearance in the presence of multiple algal species. In addition, quantification and examination of pseudofeces could indicate the extent to which hard clams ingested <italic>M. polykrikoides</italic> cells, and expelled live cells, expelled dead cells, or induced cyst formation.</p>
<p>A higher seston load can induce a variety of food selection responses in bivalves (<xref ref-type="bibr" rid="B10">Bricelj and Malouf, 1984</xref>). Some species adjust to larger particle loads by producing pseudo-feces while others, such as hard clams, control their ingestion by reducing clearance rates (<xref ref-type="bibr" rid="B10">Bricelj and Malouf, 1984</xref>; <xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>). During this study, higher biovolume experiments were completed using <italic>M. polykrikoides</italic> bloom water and <italic>R. salina</italic> to identify a possible threshold for juvenile hard clam clearance. There was no noticeable difference with regard to whether clams would open or close between total biovolume, species, or proportion of <italic>M. polykrikoides</italic>. In contrast, clams cleared <italic>M. polykrikoides</italic> at significantly lower rates during the higher biovolume treatments of 1,500 and 3,000 <italic>M. polykrikoides</italic> cells mL<sup>-1</sup> compared to 1,000 <italic>M. polykrikoides</italic> cells mL<sup>-1</sup>, a finding consistent with prior studies showing that <italic>M. mercenaria</italic> reduces its feeding rate under higher particles loads (<xref ref-type="bibr" rid="B10">Bricelj and Malouf, 1984</xref>; <xref ref-type="bibr" rid="B82">Shumway et&#xa0;al., 1985</xref>). Additionally, clams still cleared <italic>R. salina</italic> during the 1,500 <italic>M. polykrikoides</italic> cells mL<sup>-1</sup> biovolume experiments while not clearing <italic>M. polykrikoides</italic> highlighting possible selective clearance of the nonharmful algal as seen during the mixed culture experiments between CPSB-1G and <italic>R. salina</italic>. This finding also emphasizes that the impacts on clearance rates at high biovolume levels may be more a function of the toxicity of <italic>M. polykrikoides</italic> and/or total biovolume rather than total particle load given that the <italic>R. salina</italic> biovolume equivalent treatments had significantly higher cell densities. While <italic>M. mercenaria</italic> actively clears <italic>M. polykrikoides</italic> at densities of&lt;1,000 cells mL<sup>-1</sup>, these findings suggest as blooms intensify, the filtration provided by this bivalve will subside.</p>
</sec>
<sec id="s4_2">
<title>Implications for shellfish aquaculture and restoration</title>
<p>Bivalve fisheries represent a multi-billion-dollar industry in the US but hard clam populations in the northeast US, including NY, have suffered significant reductions partly due to HABs (<xref ref-type="bibr" rid="B11">Cerrato et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B34">Gobler et&#xa0;al., 2005</xref>). In turn, these declines may permit for the intensification of some HABs (<xref ref-type="bibr" rid="B11">Cerrato et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B35">Gobler and Sunda, 2012</xref>). Although clearance rates of <italic>M. mercenaria</italic> exposed to bloom water were significantly lower compared to exposure to one of the clonal cultures, hard clams cleared <italic>M. polykrikoides</italic> from bloom water when mixed with the nonharmful alga <italic>R. salina</italic>. <italic>M. polykrikoides</italic> bloom densities can vary from 10<sup>2</sup> mL<sup>-1</sup> to &gt;10<sup>4</sup> mL<sup>-1</sup> within dense bloom patches (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B63">Kudela and Gobler, 2012</xref>). Such dense blooms are dynamic, migrating vertically daily and affecting surface and benthic fauna including bivalve shellfish (<xref ref-type="bibr" rid="B74">Park et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B60">Kim et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B37">Griffith and Gobler, 2016</xref>). Given this study explored the impacts of up to 3,000 cells mL<sup>-1</sup> and found a cessation of feeding at &#x2265; 1,500 cells mL<sup>-1</sup>, it is likely extreme bloom densities would have been similarly impactful on <italic>M. mercenaria</italic>. Regardless, although <italic>M. polykrikoides</italic> is strongly toxic to many organisms including bivalves (<xref ref-type="bibr" rid="B63">Kudela and Gobler, 2012</xref>), hard clams are more resistant than other bivalve shellfish when exposed to blooms (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>). Results herein demonstrate that at moderate <italic>M. polykrikoides</italic> densities (&#x2264; 1,000 mL<sup>-1</sup>), hard clams can clear this HAB from the water column. Given that adult hard clams are generally more resilient to environmental stressors than juvenile stages (<xref ref-type="bibr" rid="B62">Kraeuter and Castagna, 2001</xref>), we hypothesize that clearance rates of adult hard clams would be less inhibited than the juveniles studied here.</p>
<p>Restoration is a major part of estuarine research and coastal environmental protection across the globe (<xref ref-type="bibr" rid="B21">Duarte et&#xa0;al., 2020</xref>). One avenue of such efforts includes shellfisheries restoration such as hard clam spawner sanctuaries aiming to restore hard clam populations in regions where they may be recruitment limited (<xref ref-type="bibr" rid="B18">Doall et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B32">Gobler et&#xa0;al., 2022</xref>). Along the US East Coast, hard clams can represent a significant proportion of the benthic community and, in some cases, may help mitigate HABs (<xref ref-type="bibr" rid="B11">Cerrato et&#xa0;al., 2004</xref>). For example, <italic>M. polykrikoides</italic> blooms occurred regularly in Shinnecock Bay, NY, USA, from 2006 to 2017 (<xref ref-type="bibr" rid="B31">Gobler et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B45">Hattenrath et al., 2016</xref>). An active restoration of the <italic>M. mercenaria</italic> population in this estuary increased densities of these bivalves by more than 17-fold and reduced the turnover time due to hard clam filtration of the western half of Shinnecock Bay from &gt;21 days to&lt; 10 days from 2012 to 2017 (<xref ref-type="bibr" rid="B32">Gobler et&#xa0;al., 2022</xref>). Consequently, there has not been a bloom of <italic>M. polykrikoides</italic> in western Shinnecock Bay since 2017.</p>
</sec>
</sec>
<sec id="s5" sec-type="conclusions">
<title>Conclusions</title>
<p>While many bivalves can be inhibited by HABs, this study highlights the resilience of <italic>M. mercenaria</italic> exposed to moderately dense blooms (&#x2264; 1,000 cells mL<sup>-1</sup>) of <italic>M. polykrikoides</italic>. Hard clams were capable of effectively clearing both <italic>M. polykrikoides</italic> bloom water and cultured clonal isolates when in mixed assemblages. While exposures to <italic>M. polykrikoides</italic> bloom water reduced the clearance of nonharmful algae and, the clearance rates of wild populations and some <italic>M. polykrikoides</italic> clones were lower than rates for nonharmful algae, clearance of this HAB persisted across densities below 1,500 cells mL<sup>-1</sup> and across all ratios of HAB-to-non-HAB algae. Clearance rates differed between strains of <italic>M. polykrikoides</italic> in a manner that differed from their known ichthyotoxcity, highlighting the need for further studies to better understand factors that control bivalve clearance of this HAB. <italic>M. mercenaria</italic> has been shown to be more resistant to <italic>M. polykrikoides</italic> than other bivalves (<xref ref-type="bibr" rid="B40">Griffith et&#xa0;al., 2019c</xref>) and this study provides a mechanistic reason for this: the ability to clear this HAB, even at bloom densities. While the physiological means by which hard clams continue to clear when exposed to this ROS-producing alga are unknown, this study demonstrates that <italic>M. mercenaria</italic> may be an ideal bivalve to consider for restoration and aquaculture in regions prone to recurrent HABs caused by <italic>M. polykrikoides</italic>.</p>
</sec>
<sec id="s6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/supplementary material. Further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The manuscript presents research on animals that do not require ethical approval for their study.</p>
</sec>
<sec id="s8" sec-type="author-contributions">
<title>Author contributions</title>
<p>DD and CG contributed to conception and design of the study. DD performed experiments, organized the database., performed the statistical analysis and wrote the first draft of the manuscript. CG funded the study wrote sections of the manuscript. Both authors contributed to manuscript revision, read, and approved the submitted version. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="s9" sec-type="funding-information">
<title>Funding</title>
<p>This project was support by New York Sea Grant (award #R-FMB-38), the Laurie Landaeu Foundation, and the Chicago Community Trust. The authors acknowledge the support of Flynn DeLaney for statistical analyses.</p>
</sec>
<sec id="s10" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s11" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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