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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2023.1135900</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Seasonal variations of siliceous microplankton fluxes and radiolarian assemblages linked to environmental conditions in Prydz Bay polynya, Eastern Antarctica</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zhang</surname><given-names>Haifeng</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/2132749"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Wang</surname><given-names>Rujian</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1356093"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Han</surname><given-names>Zhengbing</given-names>
</name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/773812"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Sun</surname><given-names>Yongming</given-names>
</name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Fan</surname><given-names>Gaojing</given-names>
</name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname><given-names>Jun</given-names>
</name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/546239"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Hu</surname><given-names>Ji</given-names>
</name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/620342"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ren</surname><given-names>Jian</given-names>
</name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/754929"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Pan</surname><given-names>Jianming</given-names>
</name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1376902"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>State Key Laboratory of Marine Geology, Tongji University</institution>, <addr-line>Shanghai</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>College of Oceanic and Atmospheric Sciences, Ocean University of China</institution>, <addr-line>Qingdao</addr-line>, <country>China</country></aff>
<aff id="aff4"><sup>4</sup><institution>Key Laboratory of Polar Science, MNR, Polar Research Institute of China</institution>, <addr-line>Shanghai</addr-line>, <country>China</country></aff>
<aff id="aff5"><sup>5</sup><institution>Ocean College, Zhejiang University</institution>, <addr-line>Zhoushan</addr-line>, <country>China</country></aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Peng Lin, University of Georgia, United States</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Fengming Chang, Institute of Oceanology (CAS), China; Lanlan Zhang, South China Sea Institute of Oceanology (CAS), China</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Rujian Wang, <email xlink:href="mailto:rjwang@tongji.edu.cn">rjwang@tongji.edu.cn</email>; Jianming Pan, <email xlink:href="mailto:jmpan@sio.org.cn">jmpan@sio.org.cn</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Marine Biogeochemistry, a section of the journal Frontiers in Marine Science</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>20</day>
<month>04</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>10</volume>
<elocation-id>1135900</elocation-id>
<history>
<date date-type="received">
<day>02</day>
<month>01</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>20</day>
<month>03</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Zhang, Wang, Han, Sun, Fan, Zhao, Hu, Ren and Pan</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Zhang, Wang, Han, Sun, Fan, Zhao, Hu, Ren and Pan</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Siliceous microplankton is an effective proxy for connecting modern and past marine environments; however, radiolarians have been understudied in Prydz Bay, Eastern Antarctica. This study investigated the changes in the siliceous microbiota fluxes and radiolarian assemblages captured in a 1-year time-series sediment trap (February 2014 to February 2015, ~490 m water depth) in the polynya of Prydz Bay. The results exhibited the strong seasonality in the radiolarian assemblages and the fluxes of radiolarians, diatoms, silicoflagellates and sponge spicules, with low numbers in winter and high numbers in summer. Seasonal variations in the sea ice and plankton community were critical in these patterns. The total radiolarian flux (TRF) displayed three peaks with higher flux than the annual average TRF over the year, all of which occurred in summer. These TRF peaks were mainly driven by seasonal fluctuations of sea ice, primary productivity, grazing pressure caused by phytophagous zooplankton and resuspension of small radiolarians in the surface sediments induced by modified Circumpolar Deep Water (mCDW) intrusion onto the shelf. There were also two notable low-TRF stages, mainly related to full sea-ice coverage and high grazing pressure. Two dominant assemblages were recognized by means of Q-factor analysis. Dominant assemblage one was composed of three small-sized taxa, <italic>Antarctissa</italic> sp., <italic>Phormacantha hystrix</italic> and <italic>Plectacantha oikiskos</italic>, which could be used as a proxy for primary productivity in the Marginal Ice Zone (MIZ) in Prydz Bay. Dominant assemblage two was composed of <italic>Antarctissa strelkovi</italic> and <italic>Antarctissa denticulata</italic>, with <italic>A. strelkovi</italic> dominating. The high flux and high relative abundance of <italic>A. strelkovi</italic> marked the extension of Ice Shelf Water (ISW) to the shelf area in Prydz Bay. These findings will provide new insights and reliable proxies for modern and paleoceanographic research in the Southern Ocean.</p>
</abstract>
<kwd-group>
<kwd>Prydz Bay</kwd>
<kwd>siliceous microplankton flux</kwd>
<kwd>radiolarian assemblage</kwd>
<kwd>seasonal variation</kwd>
<kwd>polynya</kwd>
<kwd>primary productivity</kwd>
<kwd>Ice Shelf Water</kwd>
</kwd-group>
<counts>
<fig-count count="7"/>
<table-count count="5"/>
<equation-count count="4"/>
<ref-count count="87"/>
<page-count count="18"/>
<word-count count="10651"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>The Southern Ocean, a key area for study of the interactions between seawater, sea ice, and the atmosphere and their effects on the climate system, plays a key role in the global carbon and silicon cycles (e.g., <xref ref-type="bibr" rid="B77">Xiao et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B43">Meredith et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B29">Huguenin et&#xa0;al., 2022</xref>). In recent decades, the marine environment and ecosystem of the Southern Ocean have undergone remarkable and rapid changes, of which sea ice is a crucial variate (e.g., <xref ref-type="bibr" rid="B54">Schmidt et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B43">Meredith et&#xa0;al., 2019</xref>). The MIZ is the transition zone between the open (ice-free) ocean and dense pack ice, where sea-ice algae contributes to the biological pump <italic>via</italic> the seeding of sea-ice-edge blooms (<xref ref-type="bibr" rid="B66">Szymanski and Gradinger, 2016</xref>; <xref ref-type="bibr" rid="B82">Yoshida et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B37">Louw et&#xa0;al., 2022</xref>). These blooms are thought to account for approximately 50% of total primary production of MIZ, despite the composition of the phytoplankton community is still debated (<xref ref-type="bibr" rid="B18">Deppeler and Davidson, 2017</xref>; <xref ref-type="bibr" rid="B37">Louw et&#xa0;al., 2022</xref>).</p>
<p>Coastal polynyas in the waters around the Antarctica continent are also unique marine ecosystems with low ice cover and high rates of primary production due to the combination of high sunlight and high nutrients, especially iron supply (e.g., <xref ref-type="bibr" rid="B9">Arrigo et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B41">McCormack et&#xa0;al., 2017</xref>).These areas support critical food sources for abundant top predators, including seals, penguins, and albatross. In austral spring and summer, the surface waters of polynya and their primary producers also undergo processes experienced in the MIZ. For example, sea ice algae varies dramatically in a short period of time in response to light, temperature, pH, and nutrient and gas concentrations (<xref ref-type="bibr" rid="B6">Arrigo, 2017</xref>; <xref ref-type="bibr" rid="B42">McMinn, 2017</xref>; <xref ref-type="bibr" rid="B82">Yoshida et&#xa0;al, 2020</xref>), which in turn cause changes in the feeding strategies of phytophagous zooplankton (copepods and krill) to cope with temporally and spatially changing food availability (<xref ref-type="bibr" rid="B80">Yang et&#xa0;al., 2013</xref>). This process has an important impact on the biological pump efficiency and its seasonal variations in polynya areas (<xref ref-type="bibr" rid="B23">Han, 2018</xref>; <xref ref-type="bibr" rid="B79">Yang et&#xa0;al., 2019</xref>).</p>
<p>Prydz Bay is the largest shelf sea in Eastern Antarctica, contains one of the most productive Antarctic coastal polynyas characterized by high localized primary productivity and zooplankton abundance (<xref ref-type="bibr" rid="B8">Arrigo and van Dijken, 2003</xref>; <xref ref-type="bibr" rid="B79">Yang et&#xa0;al., 2019</xref>), making it a window to study the marine ecosystem, biological pump efficiency and carbon cycle of the Southern Ocean (<xref ref-type="bibr" rid="B9">Arrigo et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B24">Han et&#xa0;al, 2019</xref>). The coastal polynyas in Prydz Bay are also believed to be one of important sources in the formation of Antarctic Bottom Water, with supercooled water originating from the Amery Ice Shelf (AIS) and West Ice Shelf (WIS) (<xref ref-type="bibr" rid="B56">Shi et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B49">Ohshima et&#xa0;al., 2022</xref>). This supercooled water, known as Ice Shelf Water (ISW), has been studied in terms of its spatial distribution and source (e.g., <xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B56">Shi et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B85">Zheng et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B26">He et&#xa0;al., 2016</xref>), yet there is still a lack of effective indicators for the northward extension of ISW and the associated records of ice shelf expansion over a longer time scale. In this regard, radiolarians in water and sediment may provide a potential solution to this problem.</p>
<p>Siliceous microplankton is an important agent of organic carbon cycling in the global ocean (<xref ref-type="bibr" rid="B40">Matul and Mohan, 2017</xref>), with radiolarians being a key group of planktonic communities that connect the micro-food loop and ocean food web (<xref ref-type="bibr" rid="B60">Steineck and Casey, 1990</xref>; <xref ref-type="bibr" rid="B64">Suzuki and Not, 2015</xref>). Radiolarians play important roles in various marine ecosystems and have been identified as powerful tools for paleoceanographic study (<xref ref-type="bibr" rid="B68">Takahashi, 1991</xref>), particularly in high-latitude areas of the Antarctic Ocean that lack calcareous sediments (<xref ref-type="bibr" rid="B4">Abelmann and Gowing, 1997</xref>). Their wide range of biodiversity and unique ecosystem regime provide a potentiality for paleoclimate study in the Southern Ocean (<xref ref-type="bibr" rid="B32">Lawler et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B38">Lowe et&#xa0;al., 2022</xref>). Knowledge of radiolarian ecology is essential for paleoceanographic reconstructions (<xref ref-type="bibr" rid="B68">Takahashi, 1991</xref>), and the time-series moored sediment trap is an effective way to assess the production rate, seasonality and distribution pattern of radiolarians in the water column. In the past few decades, sediment traps have been widely used to observe annual and seasonal changes of radiolarians and to study their ecological significance and relationship with the marine environment in Northern Hemisphere oceans (e.g., <xref ref-type="bibr" rid="B14">Boltovskoy et&#xa0;al., 1996</xref>; <xref ref-type="bibr" rid="B69">Takahashi et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B30">Ikenoue et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B40">Matul and Mohan, 2017</xref>). By contrast, only a few studies have been devoted to modern radiolarians in the Southern Ocean, mainly focusing on their spatial and temporal distributions in the Atlantic sector. These studies have shown that the obvious seasonal variations of radiolarians, characterized by short-term flux pulses during the austral summer, which are linked to variations in sea-ice coverage and also affected by phytoplankton production, &#x201c;scavenging&#x201d; by zooplankton grazers (e.g., krill and copepods), and lateral transport (e.g., <xref ref-type="bibr" rid="B1">Abelmann, 1992a</xref>; <xref ref-type="bibr" rid="B4">Abelmann and Gowing, 1997</xref>; <xref ref-type="bibr" rid="B64">Suzuki and Not, 2015</xref>; <xref ref-type="bibr" rid="B12">Boltovskoy, 2017</xref>). Additionally, distinct differences in the species composition were observed in the neritic and pelagic environments. For example, the relative abundances of the <italic>Antarctissa denticulata</italic>/<italic>strelkovi</italic> group were 50% and 36% in the upper and lower traps in the Drake Passage, respectively, but these species rarely appeared in the traps sited in the Bransfield Strait and the Powell Basin (<xref ref-type="bibr" rid="B2">Abelmann, 1992b</xref>).</p>
<p>In Prydz Bay, previous trap-based studies have focused on particle fluxes, primary production and the biological pump, the trace element compositions, and the particulate barium flux and its relationship with export production (<xref ref-type="bibr" rid="B61">Sun et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B62">Sun et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B25">Han et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B24">Han et&#xa0;al., 2019</xref>). However, radiolarian fluxes and their seasonal changes in this area are still poorly understood. This paper presents the first 1-year settling flux record of radiolarians and other siliceous mircoplankton obtained from a sediment trap deployed in the polynya of Prydz Bay from February 2014 to February 2015. The specific objectives of this study are to reveal the seasonal variation of radiolarian flux and its relationship with the marine environment, and to investigate the seasonal variations of the dominant radiolarian species/assemblages and their ecological significance in Prydz Bay.</p>
</sec>
<sec id="s2">
<label>2</label>
<title>Regional setting</title>
<p>The Prydz Bay Gyre, a closed cyclonic gyre, is characterized by modern surface circulation in Prydz Bay (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1A, B</bold></xref>). It is mainly located on the shelf area and is fed by broad inflows from the northeast (<xref ref-type="bibr" rid="B59">Smith and Tr&#xe9;guer, 1994</xref>), as well as some water from the Antarctic Coastal Current, a westward current that flows along the front of the AIS and exits near Cape Darnley, bringing cold water from the WIS (<xref ref-type="bibr" rid="B58">Smith et&#xa0;al., 1984</xref>; <xref ref-type="bibr" rid="B48">Nunes Vaz and Lennon, 1996</xref>). The Antarctic Slope Current flows westward along the continental shelf break in the north of the bay (<xref ref-type="bibr" rid="B58">Smith et&#xa0;al., 1984</xref>; <xref ref-type="bibr" rid="B39">Mathiot et&#xa0;al., 2011</xref>). Between the Antarctic Slope Current and Antarctic Circumpolar Current, the cyclonic Antarctic Divergence Zone intrudes into the shelf and brings up the relatively warm and salty Circumpolar Deep Water (<xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Schematic plots of the survey station and environmental setting of Prydz Bay and adjacent areas, Eastern Antarctica. <bold>(A)</bold> Schematic diagram of the Antarctic region. The light red shaded area of the closed loop represents the flow width of the ACC. <bold>(B)</bold> Station M8 (yellow five-pointed star) and modern surface circulation (arrows) in Prydz Bay. The black solid line (SS&#x2019;) represents the hydrological location of section 75.5&#xb0;E in <bold>(C&#x2013;E)</bold>. Major current systems (modified from <xref ref-type="bibr" rid="B76">Wu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B86">Zhu et&#xa0;al., 2019</xref>): ACC, Antarctic Circumpolar Current; ADZ, Antarctic Divergence Zone; ASC, Antarctic Slope Current; CoC, Antarctic Coastal Current; PBG, Prydz Bay Gyre. Major geomorphic units: PC, Prydz Channel; FLB, Four Ladies Bank; FB, Fram Bank; AB, Amery Basin; AIS, Amery Ice Shelf; WIS, West Ice Shelf. <bold>(C&#x2013;E)</bold> show the water masses and their temperature, salinity and silicate profiles (section 75.5&#xb0;E) near Station M8. The data set representing the climatological annual mean between 1955 and 2010, were obtained from the World Ocean Atlas 2018 (<uri xlink:href="https://odv.awi.de/data/ocean/world-ocean-atlas-2018">https://odv.awi.de/data/ocean/world-ocean-atlas-2018</uri>). Major water masses: SSW, Summer Surface Water; WW, Winter Water; SW, Shelf Water; ISW, Ice Shelf Water; mCDW, modified Circumpolar Deep Water. White vertical solid lines indicate the location of Station M8. Red squares mark the depths at which the temperature sensors were installed, and yellow inverted triangles indicate the position of the sediment trap.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g001.tif"/>
</fig>
<p>Five water masses are present around Prydz Bay (e.g., <xref ref-type="bibr" rid="B58">Smith et&#xa0;al., 1984</xref>; <xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>). It has been suggested that the water mass on the shelf is relatively simple and stable, typically composed of Antarctic Surface Water, Shelf Water, modified Circumpolar Deep Water (mCDW) and ISW (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1C, D</bold></xref>) (e.g., <xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B21">Guo et&#xa0;al., 2019</xref>). The Antarctic Surface Water can be divided into the Summer Surface Water (SSW) and Winter Water. The SSW is spread above the seasonal thermocline of a vast area of Prydz Bay south of 62&#xb0;S, with a thickness of 20 to 50&#xa0;m, while the Winter Water is a thin layer of cold, salty water under the SSW, mainly occurring north of the slope (e.g., <xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B21">Guo et&#xa0;al., 2019</xref>). The mCDW can intrude into the shelf across Four Ladies Bank or through the Prydz Channel (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1B&#x2013;D</bold></xref>) (e.g., <xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B36">Liu et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B21">Guo et&#xa0;al., 2019</xref>). The Shelf Water is the &#x201c;memory&#x201d; of the cold winter water (T &lt; &#x2212;1.5&#xb0;C) under the SSW, while the ISW is a &#x201c;supercooled&#x201d; water mass formed by internal cooling beneath the ice shelves (<xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B56">Shi et&#xa0;al., 2011</xref>), and plays an important role in the marine environmental system of Prydz Bay (<xref ref-type="bibr" rid="B59">Smith and Tr&#xe9;guer, 1994</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>). Recent studies have revealed that the ISW occurs mainly below the seasonal thermocline along the front of the AIS, with a maximum depth of 600&#xa0;m. This water mass is divided horizontally into several discrete water cores, exhibiting temporal and spatial variations (<xref ref-type="bibr" rid="B85">Zheng et&#xa0;al., 2011</xref>). Although most of the ISW is concentrated west of 73&#xb0;E, it can also be observed east of 73&#xb0;E during some summers, and is believed to originate from the WIS (<xref ref-type="bibr" rid="B85">Zheng et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>).</p>
<p>Recent studies have reported the distribution and structural characteristics of nutrients in Prydz Bay and its adjacent areas, with a generalized pattern of a &#x201c;front&#x201d; along the shelf edge, featuring high nutrient levels in the inner bay to the south of the front and low levels in the slope and deep sea areas to the north (e. g. <xref ref-type="bibr" rid="B16">Chen et&#xa0;al., 2017</xref>). The silicate content, which is closely related to radiolarian production, displays similar characteristics. The 50 &#xb5;mol kg<sup>&#x2212;1</sup> contour of silicate on the shelf appears at approximately 50&#xa0;m, and then not differing markedly with increasing depth (<xref ref-type="fig" rid="f1"><bold>Figure&#xa0;1E</bold></xref>).</p>
<p>Chlorophyll <italic>a</italic> (<italic>chl</italic>-a) concentrations in the surface water of Prydz Bay during summer follow a similar pattern to that of nutrients, being high in the shelf area and low in the deep sea area. This pattern was confirmed by measurements obtained during cruises conducted by Chinese National Antarctic Research Expedition (e.g., <xref ref-type="bibr" rid="B35">Liu and Chen, 2003</xref>). Furthermore, <italic>chl</italic>-<italic>a</italic> exhibits obvious seasonal and regional changes, as demonstrated by the remote-sensing <italic>chl</italic>-a concentration data for 2014&#x2013;2015 (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2A</bold></xref>). This variation is mainly controlled by the seasonal changes of sea ice, water temperature, sunlight duration and nutrient content (e.g., <xref ref-type="bibr" rid="B63">Sun et&#xa0;al., 2012</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Seasonal distributions of chlorophyll <italic>a</italic> and sea-ice concentrations (2014&#x2013;2015) in Prydz Bay and adjacent areas. <bold>(A)</bold> Seasonal chlorophyll <italic>a</italic> concentration data in the surface ocean derived from Aqua-MODIS products (<uri xlink:href="https://oceanwatch.pifsc.noaa.gov/erddap/griddap">https://oceanwatch.pifsc.noaa.gov/erddap/griddap</uri>). The durations of autumn, spring and summer were defined as March 01 to June 01, 2014; September 01 to December 01, 2014; and December 01, 2014 to March 01, 2015, respectively. <bold>(B)</bold> Seasonal sea-ice concentration data obtained from the climatology data set (2014&#x2013;2015) of the National Snow and Ice Data Center (<uri xlink:href="https://nsidc.org">https://nsidc.org</uri>). The durations of autumn, spring and summer were defined as March&#x2013;April&#x2013;May, September&#x2013;October&#x2013;November, and December&#x2013;January&#x2013;February of 2014 and 2015, respectively.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g002.tif"/>
</fig>
<p>Sea ice extends to approximately 57&#xb0;S during winter and generally retreats back to the inner bay in summer, but some multi-year sea ice may exist in coastal areas (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2B</bold></xref>). In the austral summer, sea ice undergoes bidirectional melting because of the polynyas in Prydz Bay, retreating from north to south in the outer bay and from south to north in the inner bay (<xref ref-type="bibr" rid="B84">Zheng and Shi, 2011</xref>). Sea ice in Prydz Bay is reported to generally begin thawing in October, with the most rapid decrease in the sea-ice concentration (SIC) in November. This melting is primarily manifested internally within the sea ice. From December, melting is mainly observed as a decrease in sea-ice coverage area. March is the primary stage of sea-ice growth, which is characterized by rapid expansion of the sea-ice edge and increasing SIC in polynyas (<xref ref-type="bibr" rid="B84">Zheng and Shi, 2011</xref>; and reference therein).</p>
</sec>
<sec id="s3" sec-type="material|methods">
<label>3</label>
<title>Material and methods</title>
<sec id="s3_1">
<label>3.1</label>
<title>Sediment trap samples</title>
<p>A mooring system was deployed for 1 year at Station M8 (68.49&#xb0;S, 75.38&#xb0;E, 620&#xa0;m water depth) in Prydz Bay polynya from February 27, 2014 to February 12, 2015 (<xref ref-type="bibr" rid="B23">Han, 2018</xref>). This system carried a Mark78H-21 sediment trap (McLane Inc., East Falmouth, Massachusetts, USA), an RBRsolo T temperature sensor (moored at ~282 m, RBR Ltd., Ottawa, Canada) and an SBE37-SM conductivity&#x2013;temperature&#x2013;depth sensor (moored at ~582 m, Sea-Bird Scientific, Bellevue, Washington, USA) (<xref ref-type="fig" rid="f1"><bold>Figure&#xa0;1</bold></xref>). The time-series trap with 21 rotary sample cups was installed at ~490 m water depth. The cups were filled with filtered seawater that had been pre-treated with 1.67% mercuric chloride solution to prevent degradation of organic matter by microbial activity (<xref ref-type="bibr" rid="B24">Han et&#xa0;al., 2019</xref>). Because of the differences in primary productivity and SIC in Prydz Bay during austral summer and winter, the sampling interval was set at approximately 1 week (7 to 9 days) from December to February and at half a month or 1 month (15 or 30 days) between March and November (<xref ref-type="supplementary-material" rid="SM1"><bold>Table S1</bold></xref>). After recovery of the trap, all samples were sieved using a 1-mm mesh nylon sieve to remove zooplankton swimmers. Particulates &lt; 1&#xa0;mm were then divided into equal aliquots with a McLane wet sample divider (WSD-10). Radiolarian and diatom slides were produced from 19 of the samples; however, this was not possible for cups 6 and 8 due to insufficient sample size.</p>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Slide preparation and identification</title>
<p>Quantitative radiolarian and diatom slides were prepared according to the methods developed based on the previous studies (<xref ref-type="bibr" rid="B74">Wang et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B83">Zhang et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B53">Ren et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B52">Ran et&#xa0;al., 2022</xref>). Subsamples of each aliquot (1/32 to 3/32, depending on sample amount) were treated with HCl (~10%) and H<sub>2</sub>O<sub>2</sub> (~30%) to generate residues. The mixtures were then stirred and diluted with distilled water four times to remove excess HCl and H<sub>2</sub>O<sub>2</sub>, as well as the reaction solution. The remaining particles were collected to a constant volume of 50 or 100 mL for slides.</p>
    <p>For each radiolarian slide, an aliquot of a known amount (1 to 40 mL, depending on the particulate content) of the residue was dropped on a cover glass (24 &#xd7; 50&#xa0;mm) settled in a Petri dish containing gelatin solution. For each diatom slide, an aliquowas countedt of a known amount (0.1 to 3 mL, depending on the particle content) of the residue was diluted to 20 mL and mixed with 2 mL gelatin solution, then dropped on two cover glasses (24 &#xd7; 24&#xa0;mm) settled in a Petri dish. After 1&#xa0;h (for radiolarian slides) or 24&#xa0;h (for diatom slides) of settling time, the supernatant in the dish was removed with bibulous paper. When the materials had completely dried, each cover glass was transferred onto a labeled slide. These permanent slides were mounted with NOA61 UV-sensitive glue (<italic>nD</italic> = ~1.56, Norland Products, Inc, USA).</p>
<p>All the radiolarians (refer to polycystine radiolarian in this paper), sponge spicules and lithogenic debris in each radiolarian slide were counted under a Leica DM 750 light microscope at &#xd7;200 magnification. Radiolarians were identified from plates in references (e.g., <xref ref-type="bibr" rid="B50">Petrushevskaya, 1967</xref>; <xref ref-type="bibr" rid="B51">Petrushevskaya, 1971</xref>; <xref ref-type="bibr" rid="B68">Takahashi, 1991</xref>; <xref ref-type="bibr" rid="B1">Abelmann, 1992a</xref>; <xref ref-type="bibr" rid="B2">Abelmann, 1992b</xref>; <xref ref-type="bibr" rid="B11">Boltovskoy, 1999</xref>; <xref ref-type="bibr" rid="B13">Boltovskoy et&#xa0;al., 2010</xref>) and an online radiolarian website (<ext-link ext-link-type="uri" xlink:href="http://www.radiolaria.org">http://www.radiolaria.org</ext-link>). Sponge spicules were mainly identified according to two books (<xref ref-type="bibr" rid="B15">Boury-Esnault and Rutzler, 1997</xref>; <xref ref-type="bibr" rid="B28">Hooper and van Soest, 2002</xref>). Lithogenic debris (&lt; 1&#xa0;mm) was counted directly. Diatoms and silicoflagellates in each diatom slide were counted with a Motic BA410E microscope at &#xd7;400 or &#xd7;1000 magnification, and were mainly identified using the plates of <xref ref-type="bibr" rid="B87">Zielinski (1993)</xref>. Only siliceous specimens with intact main bodies (&gt; 2/3 shell) were counted.</p>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Statistical data analysis</title>
<sec id="s3_3_1">
<label>3.3.1</label>
<title>Total particle fluxes</title>
<p>The total radiolarian flux (TRF) in each sample was calculated using the following equation:</p>
<disp-formula>
<mml:math display="block" id="M1">
<mml:mrow>
<mml:mtext>TRF</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mi>N</mml:mi>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>n</mml:mi>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>s</mml:mi>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>f</mml:mi>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>A</mml:mi>
<mml:mo>&#xd7;</mml:mo>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<p>where TRF is expressed in skeletons m<sup>&#x2212;2</sup> day<sup>&#x2212;1</sup>, <italic>N</italic> is the total number of radiolarians counted under the microscope, <italic>S</italic> is the area of the petri dish (mm<sup>2</sup>), <italic>n</italic> is the number of fields of vision in which radiolarians were counted under the microscope, <italic>s</italic> is the area of one field of vision (mm<sup>2</sup>), <italic>f</italic> is the proportion of the sample used for the quantitative slide, <italic>A</italic> is the area of the funnel mouth (m<sup>2</sup>) of sediment trap, and <italic>T</italic> is the duration of each sampling interval (days).</p>
<p>Similarly, the totals of diatom flux (TF<sub>diatom</sub>), silicoflagellate flux (TF<sub>silico</sub>), sponge spicule flux (TF<sub>ss</sub>), lithogenic debris flux (TF<sub>litho</sub>), and each identified radiolarian species flux (SF) in each sample were estimated using this formula.</p>
</sec>
<sec id="s3_3_2">
<label>3.3.2</label>
<title>Relative abundance</title>
<p>The relative abundance (RA) of every identified radiolarian species in each sample was calculated by the following equation:</p>
<disp-formula>
<mml:math display="block" id="M2">
<mml:mrow>
<mml:mtext>RA</mml:mtext>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>N</mml:mi>
<mml:mi>a</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mi>N</mml:mi>
</mml:mfrac>
<mml:mo>&#xd7;</mml:mo>
<mml:mn>100</mml:mn>
<mml:mo>%</mml:mo>
</mml:mrow>
</mml:math>
</disp-formula>
<p>where <italic>Na</italic> represents the number of specimens of a given radiolarian species identified in a sample, and <italic>N</italic> represents the total number of all radiolarian specimens identified in the same sample. This parameter can reflect the contribution of each species to TRF in each sample to some extent.</p>
</sec>
<sec id="s3_3_3">
<label>3.3.3</label>
<title>Q-mode factor analysis</title>
<p>Due to the limited sample material for radiolarians analysis from the sediment trap (splits of 1/32 to 3/32 of the total sample), fewer than 300 radiolarians could be counted in some samples, particularly samples collected during winter at times of low flux. Therefore, conventional Q-factor analysis, which involves selecting species with relative abundance &gt; 2% (<xref ref-type="bibr" rid="B74">Wang et&#xa0;al., 2006</xref>), was not suitable for studying changes in radiolarian assemblages. To address this issue, two new parameters, the average contribution rate (ACR) and relative contribution rate (RCR), were introduced to screen the dominant species/assemblages of radiolarians and to reduce statistical deviation caused by insufficient sample size. They were calculated as described below.</p>
<p>(1) First, the average TRF and SF values for all 19 samples (i.e., annual average, 290 days in total) were calculated and referred to as TRF<sub>ave.</sub> and SF<sub>ave.</sub>, respectively.</p>
<p>(2) Second, the ACR of every species through the year (ACR<sub>SF</sub>) were estimated, representing the average contribution rate of each species to all radiolarian assemblages over the year, using the following equation:</p>
<disp-formula>
<mml:math display="block" id="M3">
<mml:mrow>
<mml:mtext>AC</mml:mtext>
<mml:msub>
<mml:mtext>R</mml:mtext>
<mml:mrow>
<mml:mtext>SF</mml:mtext>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mtext>&#xa0;S</mml:mtext>
<mml:msub>
<mml:mtext>F</mml:mtext>
<mml:mrow>
<mml:mtext>ave</mml:mtext>
<mml:mo>.</mml:mo>
</mml:mrow>
</mml:msub>
<mml:mo stretchy="false">/</mml:mo>
<mml:mtext>TR</mml:mtext>
<mml:msub>
<mml:mtext>F</mml:mtext>
<mml:mrow>
<mml:mtext>ave</mml:mtext>
<mml:mo>.</mml:mo>
</mml:mrow>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:mtext>&#xa0;</mml:mtext>
<mml:mn>100</mml:mn>
<mml:mo>%</mml:mo>
</mml:mrow>
</mml:math>
</disp-formula>
<p>(3) Third, the RCR of every species in each sample (RCR<sub>SF</sub>) was estimated, representing the ratio of each SF in every sampling interval to TRF<sub>ave.</sub>, reflecting the time series variation of the contribution of each species to the total radiolarian flux. This was calculated using the following equation:</p>
<disp-formula>
<mml:math display="block" id="M4">
<mml:mrow>
<mml:mtext>RC</mml:mtext>
<mml:msub>
<mml:mtext>R</mml:mtext>
<mml:mrow>
<mml:mtext>SF</mml:mtext>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mtext>&#xa0;SF</mml:mtext>
<mml:mo stretchy="false">/</mml:mo>
<mml:mtext>TR</mml:mtext>
<mml:msub>
<mml:mtext>F</mml:mtext>
<mml:mrow>
<mml:mtext>ave</mml:mtext>
<mml:mo>.</mml:mo>
</mml:mrow>
</mml:msub>
<mml:mo>&#xd7;</mml:mo>
<mml:mtext>&#xa0;</mml:mtext>
<mml:mn>100</mml:mn>
<mml:mo>%</mml:mo>
</mml:mrow>
</mml:math>
</disp-formula>
<p>Species with ACR<sub>SF</sub> &gt; 2% in at least one sample are identified as dominant species, and their RCR<sub>SF</sub> were analyzed by the Q-factor analysis module (CABFAC) of the PAST software (version 4.06b) (<xref ref-type="bibr" rid="B22">Hammer et&#xa0;al., 2001</xref>).</p>
</sec>
</sec>
</sec>
<sec id="s4" sec-type="results">
<label>4</label>
<title>Results</title>
<sec id="s4_1">
<label>4.1</label>
<title>Seasonal variation of TRF</title>
<p>TRF in Prydz Bay polynya from 2014 to 2015 was low in winter and high in summer, exhibiting time-series variation that was notably different from that of total mass flux (TMF) after October 2014 (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3B, C</bold></xref>). The TRF<sub>ave.</sub> of 19 samples was 4070 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>. Three radiolarian flux peaks (RFP) with high TRF (&gt; TRF<sub>ave.</sub>) were observed throughout the year, contributing 55.5% of the total annual radiolarian count (<xref ref-type="table" rid="T1"><bold>Table&#xa0;1</bold></xref>; <xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3C</bold></xref>). Specifically, the highest TRF of the year (30850 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>) was observed during the first RFP period (RFP-1) in late summer to early autumn 2014 (February 27 to March 14), which was five to six times greater than the maximum values in later peaks, and represented 39.2% of total annual radiolarian count. After late March 2014, TRF decreased sharply with the rapid increase of SIC (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3A, C</bold></xref>). During autumn and winter (March 14 to September 10, 2014), the average TRF was only 2070 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>. After October, TRF increased markedly, and the second RFP peak (RFP-2) occurred in late spring 2014 (November 9 to December 1). The average TRF during RFP-2 was approximately 5420 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, contributing 10.1% of the total annual radiolarian count (<xref ref-type="table" rid="T1"><bold>Table&#xa0;1</bold></xref>; <xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3C</bold></xref>). Subsequently, during the early summer (December 1, 2014 to January 19, 2015), there was a low-TRF stage lasting 7 weeks, with an average of only 1360 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, even lower than the rate in winter. From that time, TRF increased again, and the third RFP (RFP-3) occurred in mid-summer (January 19 to February 3), with an average of ca. 4850 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, representing 6.2% of total annual radiolarian count (<xref ref-type="table" rid="T1"><bold>Table&#xa0;1</bold></xref>; <xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3C</bold></xref>). In the last sampling interval of the year, TRF was approximately 3650 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Time-series variations of particle fluxes, SIC (%) and <italic>Chl-</italic>a (&#x3bc;g L<sup>&#x2212;1</sup>) in Prydz Bay polynya. <bold>(A)</bold> Distributions of SIC (%) and <italic>Chl-</italic>a (&#xb5;g L<sup>&#x2212;1</sup>). SIC data were retrieved from the University of Bremen (<uri xlink:href="http://www.iup.uni-bremen.de:8084/amsr2">http://www.iup.uni-bremen.de:8084/amsr2</uri>); <italic>Chl-</italic>a data from the Aqua-MODIS products (<uri xlink:href="http://hermes.acri.fr">http://hermes.acri.fr</uri>). <bold>(B)</bold> TMF, total mass flux (<xref ref-type="bibr" rid="B23">Han, 2018</xref>). <bold>(C)</bold> TRF, total radiolarian flux. RFP-1&#x2013;3 are three radiolarian flux peaks (black dotted lines). <bold>(D)</bold> TF<sub>diatom</sub>, total diatom flux. <bold>(E)</bold> TF<sub>silico</sub>, total silicoflagellate flux. <bold>(F)</bold> TF<sub>ss</sub>, total sponge spicule flux. <bold>(G)</bold> TF<sub>litho</sub>, total lithogenic debris (&lt; 1&#xa0;mm) flux. The width of each bar in the histogram indicates the sampling interval, and black hollow inverted triangles mark samples that were not analyzed because the sample size was too small.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g003.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Seasonal variations of TRF from the trap in Prydz Bay polynya.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">No.</th>
<th valign="middle" align="center">Sampling period</th>
<th valign="middle" align="center">Season</th>
<th valign="middle" align="center">Total days</th>
<th valign="middle" align="center">Sampling intervals</th>
<th valign="middle" align="center">Ave. TRF*</th>
<th valign="middle" align="center">Contr. rate to total Rads**</th>
<th valign="middle" align="center">Ratio to TRF<sub>ave.</sub>***</th>
<th valign="middle" align="center">Stage</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">1</td>
<td valign="middle" align="center">2014.02.27-03.14</td>
<td valign="middle" align="center">Late summer to early autumn</td>
<td valign="middle" align="center">15</td>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">30850</td>
<td valign="middle" align="center">39.2%</td>
<td valign="middle" align="center">7.6</td>
<td valign="middle" align="center">RFP-1</td>
</tr>
<tr>
<td valign="middle" align="left">2</td>
<td valign="middle" align="center">2014.03.14-09.10</td>
<td valign="middle" align="center">Autumn to winter</td>
<td valign="middle" align="center">150</td>
<td valign="middle" align="center">5</td>
<td valign="middle" align="center">2070</td>
<td valign="middle" align="center">26.3%</td>
<td valign="middle" align="center">0.5</td>
<td valign="middle" align="left"/>
</tr>
<tr>
<td valign="middle" align="left">3</td>
<td valign="middle" align="center">2014.10.10-11.09</td>
<td valign="middle" align="center">Early spring</td>
<td valign="middle" align="center">30</td>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">3790</td>
<td valign="middle" align="center">9.6%</td>
<td valign="middle" align="center">0.9</td>
<td valign="middle" align="left"/>
</tr>
<tr>
<td valign="middle" align="left">4</td>
<td valign="middle" align="center">2014.11.09-12.01</td>
<td valign="middle" align="center">Late spring</td>
<td valign="middle" align="center">22</td>
<td valign="middle" align="center">2</td>
<td valign="middle" align="center">5420</td>
<td valign="middle" align="center">10.1%</td>
<td valign="middle" align="center">1.3</td>
<td valign="middle" align="center">RFP-2</td>
</tr>
<tr>
<td valign="middle" align="left">5</td>
<td valign="middle" align="center">2014.12.01-2015.01.19</td>
<td valign="middle" align="center">Early to middle summer</td>
<td valign="middle" align="center">49</td>
<td valign="middle" align="center">7</td>
<td valign="middle" align="center">1360</td>
<td valign="middle" align="center">5.7%</td>
<td valign="middle" align="center">0.3</td>
<td valign="middle" align="left"/>
</tr>
<tr>
<td valign="middle" align="left">6</td>
<td valign="middle" align="center">2015.01.19-02.03</td>
<td valign="middle" align="center">Mid-summer</td>
<td valign="middle" align="center">15</td>
<td valign="middle" align="center">2</td>
<td valign="middle" align="center">4850</td>
<td valign="middle" align="center">6.2%</td>
<td valign="middle" align="center">1.2</td>
<td valign="middle" align="center">RFP-3</td>
</tr>
<tr>
<td valign="middle" align="left">7</td>
<td valign="middle" align="center">2015.02.03-02.12</td>
<td valign="middle" align="center">Late summer</td>
<td valign="middle" align="center">9</td>
<td valign="middle" align="center">1</td>
<td valign="middle" align="center">3650</td>
<td valign="middle" align="center">2.8%</td>
<td valign="middle" align="center">0.9</td>
<td valign="middle" align="left"/>
</tr>
<tr>
<td valign="middle" align="left">8</td>
<td valign="middle" align="center">2014.02.27-2015.02.12</td>
<td valign="middle" align="center">Annual</td>
<td valign="middle" align="center">290</td>
<td valign="middle" align="center">19</td>
<td valign="middle" align="center">4070****</td>
<td valign="middle" align="center">100%</td>
<td valign="middle" align="center">1</td>
<td valign="middle" align="left"/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>*Average flux of radiolarians during the sampling period (unit: skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>); note that a sampling period may contain more than one sampling interval. Ave. TRF is calculated by summing (TRF value &#xd7; number of days) for all sampling intervals within the sampling period, and dividing this value by the total number of sampling days during the sampling period. The data are rounded to the nearest ten digits.</p>
</fn>
<fn>
<p>**Contribution to the total number of radiolarians, i.e., the proportion of radiolarians during the sampling period to the total number of radiolarians for the year. The contribution is calculated as Ave. TRF multiplied by the total number of sampling days, then divided by the total annual sinking radiolarians (290 days multiplied by 4070 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>). The sum of these numbers is slightly less than 100% because of rounding during the operation.</p>
</fn>
<fn>
<p>***Ratio of the average radiolarian flux during the sampling period to TRF<sub>ave.</sub>, which is calculated by Ave. TRF divided by TRF<sub>ave.</sub> (4070 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>). According to this parameter, there were three radiolarian flux peaks for which this value was greater than one.</p>
</fn>
<fn>
<p>****TRF<sub>ave.</sub> is calculated by the sum of TRF in each of the 19 sampling intervals multiplied by the corresponding number of sampling days, then divided by the total number of sampling days (290 days).</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s4_2">
<label>4.2</label>
<title>Seasonal variation of other particle fluxes</title>
<p>The time-series changes of TF<sub>diatom</sub> and TF<sub>silico</sub> also showed seasonality, high in summer and low in winter (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3D, E</bold></xref>), similar to TMF but different from TRF (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3B, C</bold></xref>). The annual average values were 53.6 &#xd7; 10<sup>6</sup> valves m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> for TF<sub>diatom</sub> and 0.8 &#xd7; 10<sup>6</sup> skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> for TF<sub>silico</sub> (<xref ref-type="table" rid="T2"><bold>Table&#xa0;2</bold></xref>). In detail, both diatoms and silicoflagellates exhibited flux peaks during RFP-1, which were also their highest fluxes of the year, with TF<sub>diatom</sub> and TF<sub>silico</sub> of approximately 535.1 &#xd7; 10<sup>6</sup> valves m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> and 9.0 &#xd7; 10<sup>6</sup> skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, respectively, representing 51.7% and 55.4% of the total annual counts of diatoms and silicoflagellates, respectively (<xref ref-type="table" rid="T2"><bold>Table&#xa0;2</bold></xref>). Subsequently, both types of microbiota experienced a long low-flux stage lasting 9 months, and displayed second flux peaks simultaneously with TMF in the middle of summer 2014 (December 15 to 29). During these sampling intervals, the average TF<sub>diatom</sub> and TF<sub>silico</sub> were 172.4 &#xd7; 10<sup>6</sup> valves m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> and 1.3 &#xd7; 10<sup>6</sup> skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, respectively, accounting for approximately 15.5% and 7.5% of total annual diatoms and silicoflagellates, respectively (<xref ref-type="table" rid="T2"><bold>Table&#xa0;2</bold></xref>; <xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3D, E</bold></xref>). Both of these fluxes were much lower than those during RFP-1.</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Seasonal features of the fluxes of siliceous microorganisms and lithogenic debris from the trap in Prydz Bay polynya.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">No.</th>
<th valign="middle" align="center">Particle fluxes</th>
<th valign="middle" colspan="2" align="center">Annual</th>
<th valign="middle" colspan="3" align="center">First flux peak</th>
<th valign="middle" colspan="3" align="center">Second flux peak</th>
</tr>
<tr>
<th valign="middle" align="left"/>
<th valign="middle" align="center"/>
<th valign="middle" align="center">Ave.*</th>
<th valign="middle" align="center">Max.</th>
<th valign="middle" align="center">Sampling period</th>
<th valign="middle" align="center">Ave.**</th>
<th valign="middle" align="center">Contr. rate to total fluxes***</th>
<th valign="middle" align="center">Sampling period</th>
<th valign="middle" align="center">Ave.**</th>
<th valign="middle" align="center">Contr. rate to total fluxes***</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">1</td>
<td valign="middle" align="center">Diatom/&#xd7;10<sup>6</sup> vales m<sup>-2</sup> d<sup>-1</sup>
</td>
<td valign="middle" align="center">53.6</td>
<td valign="middle" align="center">535.1</td>
<td valign="middle" align="center">2014.02.27-03.14</td>
<td valign="middle" align="center">535.1</td>
<td valign="middle" align="center">51.7%</td>
<td valign="middle" align="center">2014.12.15-12.29</td>
<td valign="middle" align="center">172.4</td>
<td valign="middle" align="center">15.5%</td>
</tr>
<tr>
<td valign="middle" align="left">2</td>
<td valign="middle" align="center">Silicoflagellate/&#xd7;10<sup>6</sup> skeletons m<sup>-2</sup> d<sup>-1</sup>
</td>
<td valign="middle" align="center">0.8</td>
<td valign="middle" align="center">9.0</td>
<td valign="middle" align="center">2014.02.27-03.14</td>
<td valign="middle" align="center">9.0</td>
<td valign="middle" align="center">55.4%</td>
<td valign="middle" align="center">2014.12.15-12.29</td>
<td valign="middle" align="center">1.3</td>
<td valign="middle" align="center">7.5%</td>
</tr>
<tr>
<td valign="middle" align="left">3</td>
<td valign="middle" align="center">Sponge spine/&#xd7;10<sup>3</sup> spicules m<sup>-2</sup> d<sup>-1</sup>
</td>
<td valign="middle" align="center">0.7</td>
<td valign="middle" align="center">6.0</td>
<td valign="middle" align="center">2014.02.27-03.14</td>
<td valign="middle" align="center">4.6</td>
<td valign="middle" align="center">32.9%</td>
<td valign="middle" align="center">2014.11.09-12.08</td>
<td valign="middle" align="center">3.9</td>
<td valign="middle" align="center">53.8%</td>
</tr>
<tr>
<td valign="middle" align="left">4</td>
<td valign="middle" align="center">Lithogenic debris/&#xd7;10<sup>5</sup> individuals m<sup>-2</sup> d<sup>-1</sup>
</td>
<td valign="middle" align="center">1.1</td>
<td valign="middle" align="center">5.0</td>
<td valign="middle" align="center">2014.02.27-03.14</td>
<td valign="middle" align="center">2.9</td>
<td valign="middle" align="center">14.2%</td>
<td valign="middle" align="center">2014.11.09-12.08</td>
<td valign="middle" align="center">4.1</td>
<td valign="middle" align="center">38.2%</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>*Annual average flux.</p>
</fn>
<fn>
<p>**Average flux in the corresponding sampling period.</p>
</fn>
<fn>
<p>***Contribution to total fluxes, representing the proportion of particles (siliceous particles and lithogenic debris) during the corresponding sampling period to the total annual sinking fluxes. Calculations are as in <xref ref-type="table" rid="T1"><bold>Table&#xa0;1</bold></xref>.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>The seasonal variation of TF<sub>ss</sub> was notably different from those of other siliceous microplankton (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C&#x2013;F</bold></xref>). The annual average TF<sub>ss</sub> was approximately 0.7 &#xd7; 10<sup>3</sup> spicules m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, with a maximum of ca. 6.0 &#xd7; 10<sup>3</sup> spicules m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> occurring from late autumn to early summer (November 24 to December 1) (<xref ref-type="table" rid="T2"><bold>Table&#xa0;2</bold></xref>; <xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3F</bold></xref>). Over the same period, TF<sub>litho</sub> also exhibited the highest peak of the year, with a maximum of approximately 5.0 &#xd7; 10<sup>5</sup> particles m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, and another peak occurred at the same time as RFP-1, with approximately 2.9 &#xd7; 10<sup>5</sup> particles m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>. The annual average TF<sub>litho</sub> was ca. 1.1 &#xd7; 10<sup>5</sup> particles m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<xref ref-type="table" rid="T2"><bold>Table&#xa0;2</bold></xref>; <xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3G</bold></xref>).</p>
</sec>
<sec id="s4_3">
<label>4.3</label>
<title>Q-mode factor analysis</title>
<p>Following the method outlined in section 3.3.3, 15 dominant radiolarian species were recognized with ACR<sub>SF</sub> &gt; 2% (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B, C</bold></xref>, <xref ref-type="fig" rid="f5"><bold>5</bold></xref>); the sum of these ACRs was 85.2%. A Q-mode factor analysis based on the RCR values of these 15 species yielded two varimax factors (<xref ref-type="table" rid="T3"><bold>Table&#xa0;3</bold></xref>), which explained 84.3% of the total population information. Factor one was composed of three small taxa: <italic>Antarctissa</italic> sp., <italic>Phormacantha hystrix</italic> and <italic>Plectacantha oikisko</italic>s (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5A&#x2013;E</bold></xref>), with ACR values of 15.0%, 13.1% and 10.6%, respectively. Factor two was composed of <italic>Antarctissa strelkovi</italic> and <italic>Antarctissa denticulata</italic> (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5F&#x2013;I</bold></xref>), with ACR values of 12.4% and 2.7%, respectively. The sum of these five ACR values was 53.8% (<xref ref-type="table" rid="T3"><bold>Table&#xa0;3</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4C</bold></xref>).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Time-series variations of the dominant species fluxes, SIC (%) and <italic>Chl-</italic>a (&#xb5;g L<sup>&#x2212;1</sup>) in Prydz Bay polynya. <bold>(A)</bold> SIC (%) and <italic>Chl-</italic>a (&#xb5;g L<sup>&#x2212;1</sup>). SIC data were retrieved from the University of Bremen (<uri xlink:href="http://www.iup.uni-bremen.de:8084/amsr2">http://www.iup.uni-bremen.de:8084/amsr2</uri>); <italic>Chl-</italic>a data from the Aqua-MODIS products (<uri xlink:href="http://hermes.acri.fr">http://hermes.acri.fr</uri>). <bold>(B)</bold> DSF, dominant species flux. RFP-1&#x2013;3 are the three radiolarian flux peaks, (black dotted boxes). The width of each histogram box indicates the sampling interval, and black hollow inverted triangles mark samples that were not analyzed because the sample size was too small. Orange and blue dotted boxes indicate dominant assemblages one and two, respectively. <bold>(C)</bold> ACR<sub>-SF</sub>, average contribution of each species flux.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g004.tif"/>
</fig>
<table-wrap id="T3" position="float">
<label>Table&#xa0;3</label>
<caption>
<p>ACR<sub>SF</sub> and varimax factor score matrix of dominant radiolarian species from the trap in Prydz Bay polynya.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">Specie Name</th>
<th valign="middle" align="center">ACR<sub>SF</sub>/%</th>
<th valign="top" align="center">Factor 1</th>
<th valign="top" align="center">Factor 2</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>Antarctissa</italic> sp.</td>
<td valign="top" align="center"><bold><italic>15.0</italic>
</bold>
</td>
<td valign="top" align="center"><bold><italic>2.488</italic>
</bold>
</td>
<td valign="top" align="center">0.305</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Phormacantha hystrix</italic>
</td>
<td valign="top" align="center"><bold><italic>13.1</italic>
</bold>
</td>
<td valign="top" align="center"><bold><italic>1.809</italic>
</bold>
</td>
<td valign="top" align="center">0.047</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Antarctissa strelkovi</italic>
</td>
<td valign="top" align="center"><bold><italic>12.4</italic>
</bold>
</td>
<td valign="top" align="center">-0.391</td>
<td valign="top" align="center"><bold><italic>3.637</italic>
</bold>
</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Plectacantha oikiskos</italic>
</td>
<td valign="top" align="center"><bold><italic>10.6</italic>
</bold>
</td>
<td valign="top" align="center"><bold><italic>1.688</italic>
</bold>
</td>
<td valign="top" align="center">0.173</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Lithomelissa setosa</italic>
</td>
<td valign="top" align="center">4.4</td>
<td valign="top" align="center">0.792</td>
<td valign="top" align="center">0.011</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Pseudocubus</italic> sp.</td>
<td valign="top" align="center">3.9</td>
<td valign="top" align="center">0.495</td>
<td valign="top" align="center">0.158</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Phormacantha</italic> group</td>
<td valign="top" align="center">3.6</td>
<td valign="top" align="center">0.835</td>
<td valign="top" align="center">0.043</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Antarctissa longa</italic>
</td>
<td valign="top" align="center">3.5</td>
<td valign="top" align="center">0.170</td>
<td valign="top" align="center">0.540</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Peridium longispinum</italic>
</td>
<td valign="top" align="center">3.1</td>
<td valign="top" align="center">0.420</td>
<td valign="top" align="center">0.016</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Plectacantha</italic> group</td>
<td valign="top" align="center">2.8</td>
<td valign="top" align="center">0.641</td>
<td valign="top" align="center">-0.038</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Botryopera</italic> sp.</td>
<td valign="top" align="center">2.8</td>
<td valign="top" align="center">0.184</td>
<td valign="top" align="center">0.202</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Antarctissa denticulata</italic>
</td>
<td valign="top" align="center"><bold><italic>2.7</italic>
</bold>
</td>
<td valign="top" align="center">0.026</td>
<td valign="top" align="center"><bold><italic>1.126</italic>
</bold>
</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Peridium</italic> sp.</td>
<td valign="top" align="center">2.5</td>
<td valign="top" align="center">0.500</td>
<td valign="top" align="center">0.012</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Ceratocyrtis histricosus</italic>
</td>
<td valign="top" align="center">2.4</td>
<td valign="top" align="center">0.240</td>
<td valign="top" align="center">0.048</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Euscenium corynephorum</italic>
</td>
<td valign="top" align="center">2.4</td>
<td valign="top" align="center">0.084</td>
<td valign="top" align="center">0.115</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>The bold values represent the factor scores of the five dominant taxa recognized in factors 1 and 2, respectively.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>The plate of 15 dominant species identified at Station M8 in Prydz Bay polynya. <bold>(A)</bold> <italic>Antarctissa</italic> sp., Summer; <bold>(B)</bold> <italic>Antarctissa</italic> sp., Autumn; <bold>(C)</bold> <italic>Phormacantha hystrix</italic>, Summer; <bold>(D)</bold> <italic>Phormacantha hystrix</italic>, Spring; <bold>(E)</bold> <italic>Plectacantha oikiskos</italic>, Summer; <bold>(F, G)</bold> <italic>Antarctissa strelkovi</italic>, Summer; <bold>(H)</bold> <italic>Antarctissa denticulata</italic>, Summer; <bold>(I)</bold> <italic>Antarctissa denticulata</italic>, Autumn; <bold>(J)</bold> <italic>Peridium longispinum</italic>, Autumn; <bold>(K)</bold> <italic>Peridium</italic> sp., Autumn; <bold>(L)</bold> <italic>Antarctissa longa</italic>, Autumn; <bold>(M)</bold> <italic>Botryopera</italic> sp., Summer; <bold>(N)</bold> <italic>Phormacantha</italic> group, Autumn; <bold>(O)</bold> <italic>Plectacantha</italic> group, Autumn; <bold>(P)</bold> <italic>Pseudocubus</italic> sp., Autumn; <bold>(Q)</bold> <italic>Lithomelissa setosa</italic>, Spring; <bold>(R)</bold> <italic>Euscenium corynephorum</italic>, Autumn; <bold>(S)</bold> <italic>Ceratocyrtis histricosus</italic>, Summer.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g005.tif"/>
</fig>
</sec>
<sec id="s4_4">
<label>4.4</label>
<title>Variations of the two dominant assemblages</title>
<p>Dominant assemblage one, i.e., factor one, was the most abundant assemblage in Prydz Bay polynya, with an annual average flux of approximately 1570 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>. This assemblage exhibited time-series variation similar to that of TRF (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C</bold></xref>, <xref ref-type="fig" rid="f4"><bold>4B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6A</bold></xref>). During RFP-1, the flux of dominant assemblage one (FDA1) reached its maximum value (10440 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>) of the year (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6A</bold></xref>), as did the fluxes of the three small taxa of assemblage one (<xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4B</bold></xref>). Of these taxa, the flux of <italic>Antarctissa</italic> sp. was approximately 4180 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, which was also the highest flux of all radiolarian taxa, while the fluxes of <italic>P. hystrix</italic> and <italic>P. oikiskos</italic> were 3480 and 2780 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, respectively (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4B</bold></xref>). From April to September, FDA1 experienced a low-flux stage similar to TRF, and then gradually increased from October and reached its second peak of the year during RFP-2 (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6A</bold></xref>). However, FDA1 and the fluxes of its three taxa during RFP-2 were markedly lower than those during RFP-1, with FDA1 of approximately 2850 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> and taxon fluxes of ca. 1250 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<italic>Antarctissa</italic> sp.), 880 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<italic>P. hystrix</italic>) and 720 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<italic>P. oikiskos</italic>) (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4B</bold></xref>). From December to the following February, their fluxes exhibited a synchronous decline from peaks to low values. Although slight increases were observed during RFP-3 in mid-January 2015, they did not reach the same peak as RFP-2, and the average FDA1 was only approximately 510 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6B</bold></xref>).</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Time-series variations of the fluxes and relative abundances of the dominant assemblages with water temperatures measured at Station M8 in Prydz Bay polynya. <bold>(A)</bold> FDA1, flux of dominant assemblage one (the group of small-sized taxa). <bold>(B)</bold> FDA2, flux of dominant assemblage two. <bold>(C)</bold> RADA1, relative abundance of dominant assemblage one; RADA2, relative abundance of dominant assemblage two. <bold>(D)</bold> MWT, medium-depth water temperature recorded by a sensor moored at 282&#xa0;m. <bold>(E)</bold>, DWT, deep-water temperature recorded by a sensor moored at 582&#xa0;m. The data sets in <bold>(D)</bold> and <bold>(E)</bold> were provided by the National Arctic and Antarctic Data Center (<uri xlink:href="http://www.chinare.org.cn">http://www.chinare.org.cn</uri>). The black dotted boxes indicate RFP-1&#x2013;3. The width of the histogram bars indicates the sampling intervals, and the black hollow inverted triangles indicate samples that were not analyzed because the sample size was too small.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g006.tif"/>
</fig>
<table-wrap id="T4" position="float">
<label>Table&#xa0;4</label>
<caption>
<p>Seasonal variations of dominant species fluxes from the trap in Prydz Bay polynya.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="3" align="left">Sampling period</th>
<th valign="middle" rowspan="3" align="center">Stage</th>
<th valign="middle" colspan="5" align="center">Ave. flux of dominant specie/skeletons&#xb7;m<sup>-2</sup>&#xb7;d<sup>-1</sup> *</th>
<th valign="middle" rowspan="3" align="center">RADA1</th>
<th valign="middle" rowspan="3" align="center">RADA2</th>
<th valign="middle" rowspan="3" align="center">RA of <italic>A. strelkovi</italic>**</th>
</tr>
<tr>
<th valign="middle" colspan="3" align="center">Dominant assemblage one</th>
<th valign="middle" colspan="2" align="center">Dominant assemblage two</th>
</tr>
<tr>
<th valign="middle" align="center"><italic>Antarctissa</italic> sp.</th>
<th valign="middle" align="center"><italic>P. hystrix</italic>
</th>
<th valign="middle" align="center"><italic>P. oikiskos</italic>
</th>
<th valign="middle" align="center"><italic>A. strelkovi</italic>
</th>
<th valign="middle" align="center"><italic>A. denticulata</italic>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">2014.02.27-03.14</td>
<td valign="middle" align="center">RFP-1</td>
<td valign="middle" align="center">4180</td>
<td valign="middle" align="center">3480</td>
<td valign="middle" align="center">2780</td>
<td valign="middle" align="center">3940</td>
<td valign="middle" align="center">700</td>
<td valign="middle" align="center">33.8%</td>
<td valign="middle" align="center">15.1%</td>
<td valign="middle" align="center">12.8%</td>
</tr>
<tr>
<td valign="middle" align="left">2014.11.09-12.01</td>
<td valign="middle" align="center">RFP-2</td>
<td valign="middle" align="center">1250</td>
<td valign="middle" align="center">880</td>
<td valign="middle" align="center">720</td>
<td valign="middle" align="center">50</td>
<td valign="middle" align="center">30</td>
<td valign="middle" align="center">53.5%</td>
<td valign="middle" align="center">1.1%</td>
<td valign="middle" align="center">0.7%</td>
</tr>
<tr>
<td valign="middle" align="left">2015.01.19-02.03</td>
<td valign="middle" align="center">RFP-3</td>
<td valign="middle" align="center">310</td>
<td valign="middle" align="center">40</td>
<td valign="middle" align="center">160</td>
<td valign="middle" align="center">2780</td>
<td valign="middle" align="center">590</td>
<td valign="middle" align="center">10.8%</td>
<td valign="middle" align="center">68.7%</td>
<td valign="middle" align="center">56.7%</td>
</tr>
<tr>
<td valign="middle" align="left">2014.02.27-2015.02.12</td>
<td valign="middle" align="center">Annual</td>
<td valign="middle" align="center">610</td>
<td valign="middle" align="center">530</td>
<td valign="middle" align="center">430</td>
<td valign="middle" align="center">510</td>
<td valign="middle" align="center">110</td>
<td valign="middle" align="center">35.7%</td>
<td valign="middle" align="center">21.7%</td>
<td valign="middle" align="center">16.2%</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>*The average flux is calculated as in <xref ref-type="table" rid="T1"><bold>Table&#xa0;1</bold></xref>, and the data are rounded to the nearest ten digits.</p>
</fn>
<fn>
<p>**The relative abundance of <italic>A. strelkovi</italic> was estimated as described in section 3.2.2.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>Dominant assemblage two, i.e., factor two, was composed of <italic>A. strelkovi</italic> and <italic>A. denticulata</italic>, showed time-series changes that were different from those of TRF (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C</bold></xref>, <xref ref-type="fig" rid="f4"><bold>4B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6B</bold></xref>). The flux of dominant assemblage two (FDA2) was lower than that of FDA1 (<xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6A, B</bold></xref>), with an annual average value of ca. 620 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>). Two peaks of FDA2 occurred during RFP-1 and RFP-3, with average values of 4640 and 3370 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, respectively. In the last sampling interval of the year, FDA2 reached 2350 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, much higher than the value of 80 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> during RFP-2 (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6B</bold></xref>). In the other 13 sampling intervals, the average FDA2 was less than 150 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6B</bold></xref>). Notably, <italic>A. strelkovi</italic> dominated this assemblage, with the flux of <italic>A. strelkovi</italic> in each sample being much higher than that of <italic>A. denticulata</italic> (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B, C</bold></xref>). The annual average flux of <italic>A. strelkovi</italic> was approximately 510 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup>, almost five times that of <italic>A. denticulata</italic>. The maximum flux of <italic>A. strelkovi</italic> was ca. 3940 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> during RFP-1, whereas the maximum for <italic>A. denticulata</italic> was only 590 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> in RFP-3 (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4B</bold></xref>).</p>
<p>The relative abundances of the two dominant assemblages exhibited opposite trends, with obvious seasonal changes (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6C</bold></xref>). During RFP-1, the relative abundance of dominant assemblage one (RADA1) was approximately 33.8%, slightly lower than the annual average (35.7%). RADA1 maintained an upward trend and reached its maximum value (55.9%) in RFP-2, with an average value of 53.5% during that interval (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>). During the same period, the relative abundance of dominant assemblage two (RADA2) gradually decreased from 15.0% to 0%, averaging 1.1% during RFP-2 (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6C</bold></xref>). Following the end of RFP-2, RADA1 decreased rapidly, reaching a minimum (8.5%) of the year by the end of RFP-3, with an average value of 10.8% during that interval. Simultaneously, RADA2 increased steeply, reaching a maximum of 74.7% in RFP-3, with an average of 68.5% (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6B</bold></xref>).</p>
</sec>
</sec>
<sec id="s5" sec-type="discussion">
<label>5</label>
<title>Discussion</title>
<sec id="s5_1">
<label>5.1</label>
<title>Seasonal variability of TRF and its controlling factors</title>
<sec id="s5_1_1">
<label>5.1.1</label>
<title>RFP-1 during late summer 2014</title>
<p>In the late summer of 2014, the dramatic changes in sea ice during RFP-1 (February 27 to March 14, 2014) likely contributed to the peak in siliceous microbiota fluxes (except for TF<sub>ss</sub>) at the same time as TMF (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3</bold></xref>). The daily SIC data showed that sea ice began to grow from February 17, 2014 at Station M8, with dramatic daily fluctuations and SIC was more than 80% to March 14, 2014 (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3A</bold></xref>), suggesting the rapid sea-ice gain and melting <italic>in situ</italic> during this period, rather than drifting from other area. During periods of dramatic changes in daily SIC, the coagulation of effective ballast and large amounts of organic matter (90% diatoms) had a marked effect on TMF (<xref ref-type="bibr" rid="B24">Han et&#xa0;al., 2019</xref>), consistent with the fluxes of diatoms and silicoflagellates (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3D, E</bold></xref>). The abundant organic matter was also beneficial to radiolarians, as evidenced by the notable positive correlations of the numbers of diatoms and silicoflagellates with the number of radiolarians in the trap, with correlation coefficients (R<sup>2</sup>) of 0.70 and 0.84, respectively (<xref ref-type="table" rid="T5"><bold>Table&#xa0;5</bold></xref>). However, these relationships are rapidly decoupled when the data for RFP-1 are removed (<xref ref-type="table" rid="T5"><bold>Table&#xa0;5</bold></xref>), further confirming the importance of phytoplankton to radiolarian production during RFP-1.</p>
<table-wrap id="T5" position="float">
<label>Table&#xa0;5</label>
<caption>
<p>Correlations between TRF and TF<sub>diatom</sub>, and TRF and TF<sub>silico</sub> in the trap in Prydz Bay polynya.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="center" rowspan="3">Variables</th>
<th valign="middle" colspan="4" align="center">TRF</th>
</tr>
<tr>
<th valign="middle" colspan="2" align="center">Data of RFP-1 included</th>
<th valign="middle" colspan="2" align="center">Data of RFP-1 not included</th>
</tr>
<tr>
<th valign="middle" align="center">R<sup>2</sup>
</th>
<th valign="middle" align="center">p</th>
<th valign="middle" align="center">R<sup>2</sup>
</th>
<th valign="middle" align="center">p</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">TF<sub>diatom</sub>
</td>
<td valign="middle" align="center">0.71</td>
<td valign="middle" align="center">0.04</td>
<td valign="middle" align="center">0.20</td>
<td valign="middle" align="center">&lt; 0.01</td>
</tr>
<tr>
<td valign="middle" align="left">TF<sub>silico</sub>
</td>
<td valign="middle" align="center">0.85</td>
<td valign="middle" align="center">0.05</td>
<td valign="middle" align="center">0.12</td>
<td valign="middle" align="center">&lt; 0.01</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Furthermore, the grazing pressure of radiolarians during RFP-1 may have been lower. Previous studies in western Antarctica suggested that at least some copepods stop feeding and become dormant in early March (<xref ref-type="bibr" rid="B55">Schnack-Schiel et&#xa0;al., 1991</xref>), and cultivation experiments in Prydz Bay have also shown that copepods mainly feed on ciliates in the shelf area near Station M8 during the late austral summer, with low consumption of the phytoplankton standing stock. Phytoplankton thus mainly supplied the predation demand of micro-zooplankton (<xref ref-type="bibr" rid="B33">Li et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B80">Yang et&#xa0;al., 2013</xref>). This is further supported by the lowest flux of zooplankton swimmers in the same trap in March (<xref ref-type="bibr" rid="B79">Yang et&#xa0;al., 2019</xref>), as well as 13 of 15 dominant species reaching their highest flux over the year at that time (<xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4B</bold></xref>). Similarly, the fluxes of two dominant assemblages both exhibited their highest values of the year at the same time (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6A, B</bold></xref>), indicating that the radiolarian fauna had a general advantage in competition during RFP-1.</p>
</sec>
<sec id="s5_1_2">
<label>5.1.2</label>
<title>Low TRF during autumn to winter in 2014</title>
<p>The 6-month low-TRF stage in autumn and winter (late March to late September, 2014) was mainly attributed to the full sea-ice coverage in the polynya (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3A, C</bold></xref>), which reduced solar radiation and limited photosynthesis by phytoplankton below the sea ice, resulting in a shortage of food for radiolarians. Additionally, the abundance of zooplankton in the waters below the sea ice was not very low, and some zooplankton (such as krill) may have shifted their feeding strategy from herbivory during summer to omnivory during autumn and winter (<xref ref-type="bibr" rid="B45">Nicol et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B79">Yang et&#xa0;al., 2019</xref>), further inhibiting the production of radiolarians. This causal relationship between the low TRF and the full ice-coverage and related zooplankton activity was more prominent in autumn (mid-March to mid-May).</p>
<p>Following mid-May, resuspension of surface sediments caused by mCDW invasion may have been the primary cause of the increasing trend of TRF (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C, F, G</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6D, E</bold></xref>). Previous studies have suggested that the mean current velocity at the mooring site was &lt; 10&#xa0;cm s<sup>&#x2212;1</sup> (<xref ref-type="bibr" rid="B48">Nunes Vaz and Lennon, 1996</xref>), making lateral advection of particulate material negligible (<xref ref-type="bibr" rid="B79">Yang et&#xa0;al., 2019</xref>). During winter, mCDW invades the shelf area near 75&#xb0;E across Four Ladies Bank, and can even advance to the front of the AIS (<xref ref-type="bibr" rid="B78">Yabuki et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B27">Herraiz-Borreguero et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>). The temperature sensor at 582&#xa0;m depth on the mooring recorded two warming events in the deep water during autumn and late winter 2014 (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6E</bold></xref>), which may have been caused by mCDW invasion from the eastern Amery Basin (<xref ref-type="bibr" rid="B27">Herraiz-Borreguero et&#xa0;al., 2015</xref>). This invasion could have transported some radiolarian remains in surface sediments from Four Ladies Bank and/or the <italic>in situ</italic> seafloor into the trap. For instance, the flux and relative abundance of dominant assemblage one increased simultaneously (<xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6A, C</bold></xref>). This process is strongly supported by the synchronous increases of TF<sub>ss</sub> and TF<sub>litho</sub> (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3F, G</bold></xref>). Sponge spicules, the hard parts of sponges (marine sessile multicellular animals; <xref ref-type="bibr" rid="B28">Hooper and van Soest, 2002</xref>), can only be derived from surface sediments. Similarly, surface sediment is a main source of lithogenic debris, the other being material released into the sea from melting sea ice (<xref ref-type="bibr" rid="B25">Han et&#xa0;al., 2018</xref>).</p>
<p>The similar effects of resuspension and lateral transport of mCDW invasion on the radiolarian remains and lithogenic debris may be related to their close particle size. Grain size analysis showed that the surface sediments from the eastern part of Prydz Bay consist mainly of clay and fine silt (<xref ref-type="bibr" rid="B73">Wang et&#xa0;al., 2015</xref>), which is close to the three small-sized taxa of dominant assemblage one (<italic>Antarctissa</italic> sp., <italic>P. hystrix</italic> and <italic>P. oikiskos</italic>) in the trap (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5A&#x2013;E</bold></xref>), generally about 50-70&#x3bc;m (<xref ref-type="bibr" rid="B50">Petrushevskaya, 1967</xref>; <xref ref-type="bibr" rid="B46">Nimmergut and Abelmann, 2002</xref>). Furthermore, the radiolarian results analyzed in surface sediments from Prydz Bay shelf area reveal that they also constitute a dominant assemblage (Zhang et&#xa0;al., in preparation). This assemblage abundance is strongly and weakly positively correlated with silt and clay content, respectively, indicating a similar distribution pattern.</p>
<p>Simultaneously, we observed that the mCDW invasion did not lead to a significant increase in TF<sub>diatom</sub> and TF<sub>silico</sub> in the trap (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3D, E</bold></xref>), despite the fact that they are abundant in surface sediments in Prydz Bay shelf. This may be attributed to the differential settling over time caused by the differences in size and mass between radiolarian and diatom. Previous studies reported that the average sedimentation rate of radiolarians in water column was &lt; 0.1&#xa0;cm s<sup>-1</sup>, which was much faster than that of diatoms and silicoflagellates (<xref ref-type="bibr" rid="B67">Takahashi, 1987</xref>; Liang and Ran, unpublished data). Additionally, the diatom assemblages on the shelf area tend to be smaller and less silicified (<xref ref-type="bibr" rid="B70">Taylor et&#xa0;al., 1997</xref>). This may result in the resuspended diatoms and silicoflagellates drifting in the water for a longer period of time.</p>
<p>It is worth noting that the temperature sensor at 282&#xa0;m depth on the mooring, located above the trap (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1C&#x2013;E</bold></xref>), recorded a mCDW invasion event around June 2014 (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6D</bold></xref>). The mCDW may have invaded to the shelf area through the Prydz Channel during this period (<xref ref-type="bibr" rid="B17">Chen et&#xa0;al., 2014</xref>), with a shallower invasion depth and undisturbed the surface sediments. This may be the causation of the absence of increased fluxes for radiolarian, lithogenic debris and sponge spicules around this period.</p>
</sec>
<sec id="s5_1_3">
<label>5.1.3</label>
<title>TRF fluctuations in spring to summer of 2014 and 2015</title>
<p>The rapid decoupling of TRF from TF<sub>diatom</sub> and TF<sub>silico</sub> during RFP-2 (November 9 to December 1, 2014) may have been related to the anomalous retreat of sea ice and resuspension of surface sediments (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3A, C&#x2013;G</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6E</bold></xref>). During normal years, the melting of sea ice dumps abundant ice algae into the water, and the sinking flux of diatoms increases due to the ballast effect of lithogenic materials (<xref ref-type="bibr" rid="B24">Han et&#xa0;al., 2019</xref>), providing plentiful prey for zooplankton. However, the SIC data showed that the sea ice around Station M8 started to melt after late October 2014, and its coverage suddenly decreased from 55.1% (November 12) to 10.9% (November 13) (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3A</bold></xref>), likely due to the physical process of the sea ice &#x201c;drifting&#x201d; away under the effect of ocean currents or wind (<xref ref-type="bibr" rid="B23">Han, 2018</xref>; <xref ref-type="bibr" rid="B24">Han et&#xa0;al., 2019</xref>). This created an ice-free open water area nearly a month earlier than in previous years (<xref ref-type="bibr" rid="B24">Han et&#xa0;al., 2019</xref>), which increased the amount of solar radiation reaching the surface waters and the temperature of those waters, and enhanced the stratification of the upper ocean, elevating the photosynthetic efficiency of phytoplankton and the exploitation of nutrients (<xref ref-type="bibr" rid="B54">Schmidt et&#xa0;al., 2018</xref>). As a result, the surface primary productivity recovered quickly, as confirmed by the increase of <italic>chl-</italic>a (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3A</bold></xref>), providing abundant prey for radiolarians. Previous studies have suggested that krill and copepods, representative of the dominant zooplankton in Prydz Bay, had a low ingestion rate of phytoplankton during the early stage of sea-ice melting, because the copepods (mainly <italic>Calanoides acutus</italic>) were still in a state of dormancy under the ice, whereas the krill (mainly <italic>Euphausia crystallorophias</italic>) showed a modest preference for ciliates (<xref ref-type="bibr" rid="B80">Yang et&#xa0;al., 2013</xref>). Thus, TRF increased rapidly due to the adequate prey and lower grazing pressure during RFP-2.</p>
<p>In addition, a warming event lasting approximately 10 days in late October 2014 was recorded by the temperature sensor on the mooring (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6E</bold></xref>), likely related to the mCDW invasion from the eastern Amery Basin. This invasion may have caused resuspension and lateral transport of surface sediments, as occurred in the southwestern Weddell Sea (<xref ref-type="bibr" rid="B3">Abelmann and Gersonde, 1991</xref>), thus resulting in increased TF<sub>ss</sub>, TF<sub>litho</sub> and TRF (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C, F, G</bold></xref>). The increased TRF was mainly contributed by the small-sized taxa such as dominant assemblage one (<xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6A, C</bold></xref>), which was close to the silt in the surface sediments in terms of particle size. However, resuspended diatoms and silicoflagellates may have been unable to settle into the trap in a short period due to their low settling velocity (<xref ref-type="bibr" rid="B67">Takahashi, 1987</xref>), as observed in the South China Sea (Liang and Ran, unpublished data).</p>
<p>An intriguing phenomenon during RFP-2 was that TF<sub>diatom</sub> and TF<sub>silico</sub> were low, and their increases were even one month later than that of TRF (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C&#x2013;E</bold></xref>), similar to the results from a trap in the southwestern Weddell Sea (<xref ref-type="bibr" rid="B3">Abelmann and Gersonde, 1991</xref>). This lag of TF<sub>diatom</sub> may have been related to changes in the phytoplankton community during this period. Previous studies have suggested that there may be a phytoplankton bloom dominated by <italic>Phaeocystis</italic> and/or some naked flagellates before diatom mass production in the Southern Ocean MIZ during the early stage of sea-ice melting (e.g., <xref ref-type="bibr" rid="B3">Abelmann and Gersonde, 1991</xref>; <xref ref-type="bibr" rid="B20">Garrison et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B19">Dumont et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B7">Arrigo et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B57">Smith et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B72">van Leeuwe et&#xa0;al., 2018</xref>). Furthermore, there is a so-called &#x201c;retention system&#x201d; that is characterized by heavy copepod grazing and re-mineralization of the produced matter in the upper ocean, which decreases the downward-sinking flux (<xref ref-type="bibr" rid="B3">Abelmann and Gersonde, 1991</xref>; and references therein). However, more work is needed to verify whether this process is applicable to Prydz Bay. Additionally, during the anomalous retreating process of sea ice, large amounts of ice algae (including diatoms if any) sealed in the bottom of the ice were &#x201c;carried&#x201d; away with sea ice drift before they could be dumped into the polynya waters, resulting in the low TF<sub>diatom</sub>, TF<sub>silico</sub> and TMF.</p>
<p>Following RFP-2, another low-TRF stage lasting 7 weeks (December 1, 2014 to January 19, 2015) was observed in sharp contrast to the high TF<sub>diatom</sub> and TF<sub>silico</sub> (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3C&#x2013;E</bold></xref>). This decoupling may have been linked to the increased grazing pressure caused by the activities of herbivorous predators (krill and copepods) in mid-summer. During this period, there was a large area of open water with high <italic>chl-a</italic> concentration in the polynya (<xref ref-type="fig" rid="f2"><bold>Figures&#xa0;2</bold></xref>, <xref ref-type="fig" rid="f3"><bold>3A</bold></xref>), and the high fluxes of phytoplankton dominated by diatoms and silicoflagellates exhibited their second peaks (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3D, E</bold></xref>). This increase in phytoplankton may have induced a rapid increase in the zooplankton biomass and daily grazing (<xref ref-type="bibr" rid="B34">Li and Yang, 2017</xref>), which is strongly supported by the increased abundance of zooplankton predators (krill, large copepods and small copepods) and their different types of fecal pellets in the same trap (<xref ref-type="bibr" rid="B45">Nicol et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B81">Yang et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B79">Yang et&#xa0;al., 2019</xref>). The scavenging of these predators in the water resulted in greater grazing pressure on radiolarians (<xref ref-type="bibr" rid="B1">Abelmann, 1992a</xref>). Additionally, the delayed settling of resuspended diatoms and silicoflagelates during RFP-2 also contributed to their subsequent high fluxes.</p>
<p>During RFP-3, <italic>chl</italic>-a in the surface ocean rose quickly, and TF<sub>diatom</sub> and TF<sub>silico</sub> were also notably higher than their values in winter and RFP-2, indicating that there could have been more prey for radiolarians (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3A&#x2013;E</bold></xref>). Moreover, FDA2 and RADA2 peaked steeply, while RADA1 decreased to its lowest value, despite FDA1 being slightly higher than in the low-TRF stage. Therefore, RFP-3 may have been mainly related to the increased primary productivity and a change in the dominant radiolarian species (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3A&#x2013;E</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6A&#x2013;C</bold></xref>).</p>
</sec>
</sec>
<sec id="s5_2">
<label>5.2</label>
<title>Ecological and environmental significance of the dominant radiolarian assemblages</title>
<sec id="s5_2_1">
<label>5.2.1</label>
<title>Dominant assemblage one as a primary productivity proxy in the MIZ</title>
<p>The small-sized group, dominant assemblage one in the M8 trap, was composed of three taxa (<italic>Antarctissa</italic> sp., <italic>P. oikiskos</italic> and <italic>P. hystrix</italic>) (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5A&#x2013;E</bold></xref>). <italic>P oikiskos</italic> and <italic>P. hystrix</italic>, which are morphologically similar, are typical bipolar species and are often treated as the <italic>P. oikiskos/P. hystrix</italic> group (<xref ref-type="bibr" rid="B50">Petrushevskaya, 1967</xref>; <xref ref-type="bibr" rid="B51">Petrushevskaya, 1971</xref>). This group is typically found in neritic coastal environments with fjord topography and steep shelves in the Southern Ocean, such as the Powell Basin and Bransfield Strait (<xref ref-type="bibr" rid="B1">Abelmann, 1992a</xref>; <xref ref-type="bibr" rid="B2">Abelmann, 1992b</xref>). In the Ross Sea, it is used to indicate a nearshore environment with high primary productivity and drastic changes in water depth and topography, and has even been used as a proxy of the MIZ with active seasonal sea-ice changes (<xref ref-type="bibr" rid="B47">Nishimura et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B71">Teng and Wang, 2019</xref>). This is consistent with reports of this group in the high latitudes of the Northern Hemisphere, where it is thought to inhabit a cold-water, highly productive neritic sea with complex terrain such as steep shelves and fjords (<xref ref-type="bibr" rid="B31">J&#xf8;rgensen, 1905</xref>; <xref ref-type="bibr" rid="B46">Nimmergut and Abelmann, 2002</xref>; <xref ref-type="bibr" rid="B5">Abelmann and Nimmergut, 2005</xref>; <xref ref-type="bibr" rid="B74">Wang et&#xa0;al., 2006</xref>). <italic>Antarctissa</italic> sp. is rarely reported in the Southern Ocean, but is common in open water formed after sea-ice melting in the Sea of Okhotsk. This taxon is most abundant in the subsurface minimum-temperature zone (50&#x2013;130 m), and is considered to be an index for the Sea of Okhotsk dichothermal layer and for the presence of pronounced summer sea-surface stratification linked to primary productivity (<xref ref-type="bibr" rid="B46">Nimmergut and Abelmann, 2002</xref>).</p>
<p>In this study, the average flux of the small-sized group was approximately 1570 skeletons m<sup>&#x2212;2</sup> d<sup>&#x2212;1</sup> (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>), representing 38.7% of the total annual radiolarian count (<xref ref-type="table" rid="T3"><bold>Table&#xa0;3</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B, C</bold></xref>). During RFP-1 and RFP-2, there were dramatic sea-ice changes, the flux and relative abundance of the small-sized group and its members were notably higher than the values during RFP-3 in the ice-free period (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4A, B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6A, C</bold></xref>). Although <italic>chl</italic>-a data was missing because of rapid sea-ice fluctuations during RFP-1 (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3A</bold></xref>), TMF, TF<sub>diatom</sub> and TF<sub>silico</sub> all indicated that the primary productivity of the upper ocean was almost the highest of the year at that time (<xref ref-type="fig" rid="f3"><bold>Figures&#xa0;3A&#x2013;E</bold></xref>), which was beneficial to radiolarian fauna. After the full ice-coverage winter, sea-ice melting accelerated after October 24, 2014, resulting in the transport of fresh, cold water into the polynya and the enhanced stratification of the upper ocean. This water input was favorable for the recovery of phytoplankton primary production and for the growth of <italic>Antarctissa</italic> sp. (<xref ref-type="bibr" rid="B46">Nimmergut and Abelmann, 2002</xref>). During RFP-2, the SIC decreased sharply from 55.1% to 10.9% in one day, and open water then appeared in the polynya (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3A</bold></xref>). Higher sea-surface temperature and enhanced light efficiency provided the environmental basis for rapid rises in primary productivity and <italic>chl</italic>-a, which supplied rich, fresh food for <italic>Antarctissa</italic> sp., the dominant taxa feeding primarily on bacteria or relatively fresh phytoplankton debris from the high-productivity surface waters (<xref ref-type="bibr" rid="B5">Abelmann and Nimmergut, 2005</xref>). In the MIZ, the assemblage was composed of juveniles and small-sized taxa able to respond quickly to food availability (<xref ref-type="bibr" rid="B65">Swanberg and Eide, 1992</xref>; <xref ref-type="bibr" rid="B10">Bj&#xf8;rklund et&#xa0;al., 1998</xref>). These factors, together with the lower predation rate by zooplankton (<xref ref-type="bibr" rid="B80">Yang et&#xa0;al, 2013</xref>), the possible dominance of the existing phytoplankton community by <italic>Phaeocystis</italic> and/or naked flagellates, and the &#x201c;retention system&#x201d; (<xref ref-type="bibr" rid="B3">Abelmann and Gersonde, 1991</xref>; and references therein), created a favorable marine environment for growth of small-sized taxa. This was reflected in the second flux peak of the small-sized group and the highest value of RADA1 (55.9%) (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6A, C</bold></xref>). Thus, this small-sized group can be used as a proxy for surface primary productivity in the MIZ in Prydz Bay.</p>
</sec>
<sec id="s5_2_2">
<label>5.2.2</label>
<title><italic>Antarctissa strelkovi</italic> as a proxy for extension of cold Ice Shelf Water</title>
<p>Although <italic>A. strelkovi</italic> and <italic>A. denticulata</italic> (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5F&#x2013;I</bold></xref>) were classified into the same assemblage by Q-factor analysis, <italic>A. strelkovi</italic> may record more representative environmental information than <italic>A. denticulata</italic> in Prydz Bay, and its seasonal variations also appear to be a stronger indication of local characteristics. The flux and average contribution rate of <italic>A. strelkovi</italic> were much higher than those of <italic>A. denticulata</italic> (<xref ref-type="table" rid="T3"><bold>Table&#xa0;3</bold></xref>; <xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B, C</bold></xref>). In addition, the two species have markedly different living habits. <italic>A. strelkovi</italic> is restricted to the Antarctic Ocean and is not encountered in warm-water regions. This species is typically found in cold (&lt; 2&#xb0;C) shallow water with abundant dissolved silicate (<xref ref-type="bibr" rid="B50">Petrushevskaya, 1967</xref>). The results of opening/closing net samples collected from 0 to 1000&#xa0;m showed that the species is restricted to the Antarctic Surface Water and has its highest loadings in the uppermost 200&#xa0;m of the water (<xref ref-type="bibr" rid="B4">Abelmann and Gowing, 1997</xref>). In the MIZ, <italic>A. strelkovi</italic> prefers surface water shallower than 100&#xa0;m, but can also migrate downward to 385&#xa0;m in the shelf area (<xref ref-type="bibr" rid="B44">Morley and Stepien, 1985</xref>). In other words, <italic>A. strelkovi</italic> is mainly concentrated in environments with temperatures &lt; 1.5&#xb0;C and high levels of dissolved silicate (50&#x2013;70 &#xb5;mol L<sup>&#x2212;1</sup>) (<xref ref-type="bibr" rid="B4">Abelmann and Gowing, 1997</xref>). Therefore, neither seawater temperature nor silicate content was the limiting factor in Prydz Bay polynya (<xref ref-type="fig" rid="f1"><bold>Figure&#xa0;1D</bold></xref>). <italic>A. denticulata</italic> is also a typical dominant species in the Antarctic cold water group, and was often treated as the <italic>A. denticulata</italic>/<italic>strelkovi</italic> group in earlier studies (e.g., <xref ref-type="bibr" rid="B1">Abelmann, 1992a</xref>; <xref ref-type="bibr" rid="B2">Abelmann, 1992b</xref>; <xref ref-type="bibr" rid="B11">Boltovskoy, 1999</xref>; <xref ref-type="bibr" rid="B13">Boltovskoy et&#xa0;al., 2010</xref>). It is an abundant and typical species in deep-water sediments of the open ocean, with relative abundance of up to 20%&#x2013;30%. However, its abundance is at most 24% in coastal areas with ice-raft deposits (<xref ref-type="bibr" rid="B50">Petrushevskaya, 1967</xref>) and only approximately 3%&#x2013;5% in shelf areas such as Prydz Bay (<xref ref-type="bibr" rid="B86">Zhu et&#xa0;al., 2019</xref>; Zhang et&#xa0;al., in preparation).</p>
<p>Based on this information, <italic>A. strelkovi</italic> in dominant assemblage two is thought to have a greater environmental significance and highly sensitive to cold water masses in the study area. There were two peaks of the <italic>A. strelkovi</italic> flux over the year, in RFP-1 and RFP-3 (<xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4B</bold></xref>). The species&#x2019; relative abundance in RFP-1 (12. 8%) was much lower than that in RFP-3 (56.7%) and lower than its annual average (16.2%) (<xref ref-type="table" rid="T4"><bold>Table&#xa0;4</bold></xref>), indicating that <italic>A. strelkovi</italic> had no competitive advantage relative to other radiolarians during RFP-1. During winter, the mCDW invaded the shelf area across Four Ladies Bank and caused significant warming in the medium-depth and deep waters (<xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6D, E</bold></xref>), which could have caused resuspension and movement of sediment from the bank or <italic>in situ</italic> seafloor to the trap. However, this process did not change the decreasing <italic>A. strelkovi</italic> flux and relative abundance, likely due to its larger skeleton size (150-170 &#x3bc;m) compared to members of the small-sized group (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5A&#x2013;I</bold></xref>) (<xref ref-type="bibr" rid="B31">J&#xf8;rgensen, 1905</xref>; <xref ref-type="bibr" rid="B50">Petrushevskaya, 1967</xref>).</p>
<p>As spring and summer arrived, the surface seawater temperature and phytoplankton productivity increased due to the melting of sea ice (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2B</bold></xref>), resulting in great silicate consumption. This may have prompted <italic>A. strelkovi</italic> to migrate to the middle-deep ocean, where the temperature is lower and the silicate levels higher (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7</bold></xref>). In addition, the temperature sensor at 282&#xa0;m showed that the medium-depth ocean was affected by cold water masses after mid-September 2014, particularly after mid-January 2015 (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6D</bold></xref>). In Prydz Bay, these cold waters mainly originated from the supercooled water under the ice shelf, i.e., the ISW (<xref ref-type="fig" rid="f7"><bold>Figures&#xa0;7A, B</bold></xref>). The remarkable low-temperature characteristics of this water had a marked cooling effect on the waters of the shelf area. <xref ref-type="bibr" rid="B27">Herraiz-Borreguero et&#xa0;al. (2015)</xref> noted that the ISW flows into the small circulation under the AIS from the northeast and then flows out from the west. Some studies have suggested that the ISW developed in front of the AIS mainly occurs west of 73&#xb0;E, while the ISW in the area east of 73&#xb0;E may originate from the WIS in eastern Prydz Bay (<xref ref-type="bibr" rid="B85">Zheng et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B75">Williams et&#xa0;al., 2016</xref>). Notably, the flux of <italic>A. strelkovi</italic> started to rise in synchrony with cooling after September; in particular, the steep increase in the relative abundance of this species from December onward indicates sensitivity to the cooling process of the medium-depth waters (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6B</bold></xref>). More significantly and directly, the water at 282&#xa0;m cooled by 0.2&#xb0;C (down to as low as &#x2212;2&#xb0;C) during RFP-3 (January 19 to February 3 2015), which is a typical feature of ISW. At the same time, the flux and relative abundance of <italic>A. strelkovi</italic> rapidly peaked (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4B</bold></xref>, <xref ref-type="fig" rid="f6"><bold>6B</bold></xref>), indicating that this dominant species, which prefers a cold, high-silicate environment, was notably sensitive to supercooled water from the ice shelf during periods of open water and high surface seawater temperatures in the polynya during summer. In conclusion, the high flux and high relative abundance of <italic>A. strelkovi</italic> in Prydz Bay mainly records the process of ISW invasion to the shelf area in summer.</p>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>Marine environmental profiles of Section 75.5&#xb0;E on the shelf of Prydz Bay in late summer 2015. <bold>(A, B)</bold> Temperature and salinity profiles showing the locations of water masses. <bold>(C)</bold> Silicate profile. Major water masses: SSW, Summer Surface Water; SW, Shelf Water; ISW, Ice Shelf Water. White vertical solid lines indicate the location of Station M8, red rectangles mark the depths of the temperature sensors, and yellow inverted triangles indicate the position of the sediment trap. The data set was provided by the National Arctic and Antarctic Data Center (<uri xlink:href="http://www.chinare.org.cn">http://www.chinare.org.cn</uri>), and was obtained during the 31<sup>st</sup> cruise of CHINARE from February 28 to March 1, 2015.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1135900-g007.tif"/>
</fig>
</sec>
</sec>
</sec>
<sec id="s6" sec-type="conclusions">
<label>6</label>
<title>Conclusions</title>
<p>The 1-year flux record of siliceous microplankton acquired in a time-series trap (February 2014 to February 2015, ~490 m) moored in Prydz Bay, Eastern Antarctica, highlights the strong seasonality of radiolarian, diatom, silicoflagellate and sponge spicule fluxes and radiolarian assemblages. All fluxes were low in winter and high in summer and were closely related to the particular marine environment of the study area, especially seasonal variations in sea ice and the plankton community.</p>
<p>Three TRF peaks (&gt; TRF<sub>ave.</sub>) were observed over the year, all in the summer season and referred as to RFP-1, RFP-2 and RFP-3. The other two notable low-TRF intervals were identified, one in winter and another in mid-summer. During RFP-1 in early March 2014 (late summer), TRF was the highest of the year, five to six times greater than those in RFP-2 (early summer 2014&#x2013;2015) and RFP-3 (mid-to-late summer), coinciding with the maximum values of TF<sub>diatom</sub>, TF<sub>silico</sub> and TMF. This result can be attributed to the increased primary productivity and decreased grazing pressure related to the rapid fluctuation of sea ice in situ. The generally low siliceous microbiota fluxes in autumn and winter (late March to late September) were mainly constrained by the harsh environment resulting from full sea-ice coverage. The resuspension of surface sediments caused by mCDW intrusion onto the shelf played an important role in the increased radiolarian flux. Decoupling of radiolarian and siliceous phytoplankton fluxes during RFP-2 was mainly related to the abnormal sea-ice retreat in early summer of 2014&#x2013;2015. The enhanced competitive advantage of the small-sized radiolarian group, the mCDW invasion and the bloom of non-diatom-dominated phytoplankton communities were also important factors. During mid-summer (December 2014 to early January 2015), radiolarians exhibited a low-flux stage lasting 7 weeks, in sharp contrast to the second flux peaks of diatoms and silicoflagellates, mainly related to the increased grazing pressure caused by the activities of herbivorous predators. RFP-3 was mainly related to the increase of surface primary productivity and a change in the dominant radiolarian assemblages.</p>
<p>Two dominant radiolarian assemblages were recognized by Q-factor analysis of 15 dominant radiolarian species, with markedly differences in fluxes and relative abundances. Dominant assemblage one, referred to as the small-sized group, was composed of <italic>Antarctissa</italic> sp., <italic>P. oikiskos</italic> and <italic>P. hystrix</italic>, and showed high fluxes during RFP-1 and RFP-2. Its relative abundance was greatest during RFP-2, with a preceding upward trend and a subsequent rapid decrease, suggesting that it can be used as a proxy for primary productivity in the MIZ of Prydz Bay. Dominant assemblage two was composed of <italic>A. strelkovi</italic> and <italic>A. denticulata</italic>, with <italic>A. strelkovi</italic> dominating. The flux of <italic>A. strelkovi</italic> was high during RFP-1 and RFP-3, but its relative abundance was opposite to that of the small-sized group, being lowest during RFP-1 and highest during RFP-3. This suggests that the high flux and high relative abundance of <italic>A. strelkovi</italic> may record the extension of ISW onto the shelf in Prydz Bay.</p>
</sec>
<sec id="s7" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1"><bold>Supplementary Material</bold></xref>. Further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec id="s8" sec-type="author-contributions">
<title>Author contributions</title>
<p>HZ performed the analyses of sediment trap samples and wrote the first version of the manuscript, RW conceived the sample experiments, manuscript structure and revised the text, ZH performed the TMF experiments and the statistical analysis of marine environmental data, YS supported the processing and plotting of the temperature sensors data, GF performed the data processing and plotting of sea-ice concentration and chlorophyll-a, JZ and JH collected and treated the samples, JR supported the diatom identification and revised the manuscript, and JP organized the project implementation. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="s9" sec-type="funding-information">
<title>Funding</title>
<p>The study was financially supported by National Natural Science Foundation of China (Grant nos. 42030401, 41506223, 41976228, 42276255), Scientific Research Fund of the Second Institute of Oceanography, MNR, (Grant nos. JG2211), and National Polar Special Program &#x201c;Impact and Response of Antarctic Seas to Climate Change&#x201d; (Grant nos. IRASCC 01-01-02A, IRASCC 02-02).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We thank all the cruise members of cruise 30<sup>th</sup> and 31<sup>st</sup> of Chinese National Antarctic Research Expedition (CHINARE) for deployment and recovery of the mooring. We thank Chengcheng Shen and Xinfeng Dai from SIO for their valuable suggestions on the manuscript and identification of sponge spicules. Yang Guang (Institute of Oceanology, Chinese Academy of Sciences), Guijun Guo (First Institute of Oceanography, MNR) and Jiuxin Shi (Ocean University of China) are acknowledged for their analytical support and suggestions on the zooplankton data, water masses and temperature data. We also wish to thank the reviewers for their valuable comments that allowed us to improve the manuscript.</p>
</ack>
<sec id="s10" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s11" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s12" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2023.1135900/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2023.1135900/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Table_1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
</sec>
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