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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2023.1103502</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Runoff from upstream changes the structure and energy flow of food web in estuary</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Yi</surname>
<given-names>Yujun</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname>
<given-names>Fanxuan</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1709862"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Qi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Song</surname>
<given-names>Jie</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>State Key Laboratory of Water Environmental Simulation, School of Environment, Beijing Normal University</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Ministry of Education Key Laboratory of Water and Sediment Science, School of Environment, Beijing Normal University</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Ya Ping Wang, East China Normal University, China</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Xiaoxiao Li, Guangdong University of Technology, China; Yoh Yamashita, Kyoto University, Japan; Hyun Je Park, Gangneung&#x2013;Wonju National University, Republic of Korea</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Yujun Yi, <email xlink:href="mailto:yiyujun@bnu.edu.cn">yiyujun@bnu.edu.cn</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Coastal Ocean Processes, a section of the journal Frontiers in Marine Science</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>29</day>
<month>03</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>10</volume>
<elocation-id>1103502</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>11</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>14</day>
<month>02</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Yi, Zhao, Liu and Song</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Yi, Zhao, Liu and Song</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<sec>
<title>Introduction</title>
<p>Sediment and nutrients flow into estuary with runoff, and then influence the estuary ecosystem. Much work has been done for investigating the response of water quality and species group (eg. phytoplankton or zooplankton) to the runoff from upstream, while few research has been taken to evaluate the response of the whole ecosystem.</p>
</sec>
<sec>
<title>Methods</title>
<p>Food webs of different seasons and regions were established based on stable isotope analysis and Bayesian mixing model. The influences of upstream runoff and sediment transport on the estuarine food webs were analyzed.</p>
</sec>
<sec>
<title>Results</title>
<p>Food web in estuary had highly spatial-temporal variability. The stable isotope values of organisms were higher on the northern shore than that on the southern shore. The area with high-turbidity freshwater inflow nurtured more terrestrial- organic- matter (TOM) relying species. And the contribution of TOM to food web was higher in flood season than that in non-flood season. The trophic levels of major consumers in the non-flood season were generally higher than that in the flood season. Significant differences in the average TP of species between two shores appeared during the non-flood season (P &lt; 0.05). Expect for the C value, all of the topological indexes of food webs on the northern shore were higher than those on the southern shore, and they were higher in the flood period.</p>
</sec>
<sec>
<title>Discussion</title>
<p>The input and diffusion of sediment and nutrients carried by runoff led to the changes in the dietary structure of estuarine organisms and the decrease in trophic levels of major consumers. At the same time, flow pulse with high sediment also aggravated the spatial differences of the structure of food webs. The higher contribution of TOM to consumers increased the link density of food web on the southern shore, making it a more robust system. However, the high diversity of food sources and aquatic species made the food web more complex on the northern shore.</p>
</sec>
</abstract>
<kwd-group>
<kwd>food web</kwd>
<kwd>stable isotope</kwd>
<kwd>energy flow</kwd>
<kwd>flow regime</kwd>
<kwd>estuarine ecology</kwd>
</kwd-group>
<contract-num rid="cn001">52025092, U2243236</contract-num>
<contract-num rid="cn002">2022YFC3202002</contract-num>
<contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content>
</contract-sponsor>
<contract-sponsor id="cn002">National Key Research and Development Program of China<named-content content-type="fundref-id">10.13039/501100012166</named-content>
</contract-sponsor>
<counts>
<fig-count count="9"/>
<table-count count="3"/>
<equation-count count="3"/>
<ref-count count="71"/>
<page-count count="14"/>
<word-count count="6265"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<label>1</label>
<title>Introduction</title>
<p>The energy flow within a food web signifies the trophic structure of the community, the population dynamics and the nutrient cycling in the ecosystem (<xref ref-type="bibr" rid="B68">Yen et&#xa0;al., 2016</xref>). Due to the unique geographic location and dynamic characteristics of estuarine ecosystems, organic matter and organisms are highly mobile. So the energy flow in the food web of estuarine ecosystems exhibits complex spatial and temporal characteristics (<xref ref-type="bibr" rid="B2">Abrantes et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B47">Poiesz et&#xa0;al., 2020</xref>). Identifying the relative importance of different basal food sources and the main energy flow pathways are the prerequisites for predicting the response of estuarine ecosystems to external disturbances, and also significant for maintaining the biodiversity, stability and function of estuarine ecosystems (<xref ref-type="bibr" rid="B60">Thieltges et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B46">Pinkerton and Bradford-Grieve, 2014</xref>; <xref ref-type="bibr" rid="B17">Hui and Williams, 2020</xref>).</p>
<p>Temporal and spatial variations of the energy flow patterns are existed in the estuarine food web (<xref ref-type="bibr" rid="B4">Arcagni et&#xa0;al., 2015</xref>). In terms of space, different environmental conditions, such as water turbidity and the concentration of dissolved organic/inorganic nutrients, dominated the changes in the basal food sources supporting the food web (<xref ref-type="bibr" rid="B53">Roach, 2013</xref>). High suspended sediment concentration significantly limits the primary production by modifying light penetration and scattering, shifting the basal food sources towards terrestrial material (<xref ref-type="bibr" rid="B29">Lunt and Smee, 2020</xref>). In terms of time, changes in flow regime such as magnitude of discharge, seasonal subside of terrestrial material can affect the proportion of available autochthonous/allochthonous resources for consumers (<xref ref-type="bibr" rid="B41">Olin et&#xa0;al., 2013</xref>). Higher freshwater inflow will enhance the influence of continental organic matter on estuarine food webs (<xref ref-type="bibr" rid="B31">Marshall et&#xa0;al., 2021</xref>). Hydrological regulation contributed to temporal and spatial variations of estuarine food webs simultaneously. It affected the natural flow and thermal patterns of rivers as well as the diffusion path and sediment transport (<xref ref-type="bibr" rid="B40">Olden and Naiman, 2010</xref>), which lead to changes in the river physical mechanisms, estuarine ecological environment, and the terrestrial organic matter (TOM) availability (<xref ref-type="bibr" rid="B63">Wang et&#xa0;al., 2010</xref>). It changed the basal food sources available in time (<xref ref-type="bibr" rid="B15">Hladyz et&#xa0;al., 2012</xref>), ultimately exacerbating/mitigating spatial differences in trophic interactions and the energy flow of the estuarine food web. Therefore, it further affected the overall structure and function of the estuarine ecosystem (<xref ref-type="bibr" rid="B1">Abrantes et&#xa0;al., 2014</xref>). In artificially controlled rivers, some researches have been taken to evaluate the influence of longitudinal connectivity changing along river on the food web structure and function (<xref ref-type="bibr" rid="B3">Abrantes and Sheaves, 2010</xref>; <xref ref-type="bibr" rid="B54">Ru et al., 2019</xref>), while the spatial heterogeneity of the estuary region was less concerned (<xref ref-type="bibr" rid="B12">Garcia et&#xa0;al., 2017</xref>). Although previous researchers have made progress on the horizontal spatial differences in trophic structure characteristics of communities based on stable isotopes (<xref ref-type="bibr" rid="B28">Liu et&#xa0;al., 2020</xref>), the understanding of energy flow pattern of estuarine food webs is still limited. Incorporating the effects of hydrological and environmental conditions into estuarine food webs to quantify the energy transmission mechanisms is important to help further understanding how the spatial and temporal changes of food sources and trophic structure affect the ecosystem functions.</p>
<p>One of the main methods to reveal the structure and function of food webs is stable isotopic analysis (<xref ref-type="bibr" rid="B35">Middelburg, 2014</xref>). In calculating the trophic level and food source contributions, compared to traditional stomach content analysis methods, stable isotopic analysis methods are not limited by time and space, and can reflect information about organisms&#x2019; food absorption and long-term metabolism (<xref ref-type="bibr" rid="B69">Young et&#xa0;al., 2018</xref>). Consumers&#x2019; carbon isotopes which exhibit significant differences among primary producers with different photosynthetic pathways, are often used to determine the relative contribution of each basal food source to consumers (<xref ref-type="bibr" rid="B65">West et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B24">Layman et&#xa0;al., 2012</xref>). And nitrogen stable isotopes which are stepwise enrichment with trophic transfers, are powerful tool for determining the relative trophic position of species in the food web and the length of the food chain (<xref ref-type="bibr" rid="B19">Jennings and van der Molen, 2015</xref>).</p>
<p>The Yellow River Estuary (YRE), a typical weak tide estuary, the environment is highly influenced by the runoff from upstream Yellow River (YR). Due to the water-sediment regulation scheme, the YR carries a large quantity of water and sediment discharge into Bohai Sea during the flood season (<xref ref-type="bibr" rid="B16">Hou et al., 2020</xref>). The diffusion of water and sediment caused environmental disturbances in YRE (<xref ref-type="bibr" rid="B28">Liu et&#xa0;al., 2020</xref>), which might change the amount and distribution of organic matter and aquatic life. This study aimed to explore (1) whether YR downstream flow and sediment pulse would influence the estuarine ecosystem, (2) by what factors would runoff affect the YRE ecosystem, (3) how did structure and energy flow of food webs in YRE respond to different runoff and sediment processes.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<label>2</label>
<title>Materials and methods</title>
<sec id="s2_1">
<label>2.1</label>
<title>Study area</title>
<p>The Yellow River, which flows into the Bohai Sea, is the second largest river in China, with a length of more than 5,400 kilometers and a drainage area of 745,000 square kilometers (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). The average annual runoff of Lijin Station (the nearest hydrologic station to the mouth of Yellow River Estuary) is 28.86 billion m&#xb3;, carrying 638 million tons of sediment into the Bohai sea. Among that, runoff and sediment discharge from May to October accounts for more than 80% and 95% of the year, respectively. The interaction between the ocean and the land in the YRE is obvious, the ecological environment factors change on a gradient, and the vegetations are distributed in patches (<xref ref-type="bibr" rid="B20">Jiang et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B66">Xie et&#xa0;al., 2020</xref>). The dominant species in the supratidal zone are <italic>Phragmites australis, Suaeda heteropteran</italic>, <italic>Tamarix chinensis</italic> and other halophytes, which are regarded as the main land source, representing the TOM in the YR. <italic>Spartina alterniflora</italic> dominates the intertidal zone, and the main producers of the subtidal zone are microphytobenthos (MPB), phytoplankton and other macroalgae (<xref ref-type="bibr" rid="B66">Xie et&#xa0;al., 2020</xref>). The clear community structure of producers makes the identification and sampling of food sources more feasible.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Location of the study area and sampling sites. (NS) Northern shore; (SS)Southern shore. The distribution of suspended sediment in seawater (in bottle green) around YRE is shown in yellow.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g001.tif"/>
</fig>
<p>According to the uneven annual distribution of water and sediment fluxes, the hydrological period in the YRE can be divided into flood season (From May to October) and non-flood season (From November to April) (<xref ref-type="supplementary-material" rid="SM1">
<bold>Figure&#xa0;A1</bold>
</xref>). Due to the influence of the spread of freshwater and the differing topography, environmental conditions showed differences between the northern and southern shores (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table A1</bold>
</xref>). The variations in flow regimes and environmental characteristics contributed to the difference of energy flow dynamics in the food web at YRE (<xref ref-type="bibr" rid="B30">Maceda-Veiga et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B28">Liu et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B31">Marshall et&#xa0;al., 2021</xref>).</p>
</sec>
<sec id="s2_2">
<label>2.2</label>
<title>Sample collection and data analysis</title>
<p>Representative sampling areas with obvious environmental heterogeneity were set up on both the southern and northern shores of the YRE, and the sampling was repeated for three times at each sampling area. Because of the distinct hydrological characteristics in flood and non-flood seasons, the sampling was conducted in October 2018 and April 2019 in the YRE nature reserve. The main primary producers from subtidal zone, intertidal zone and land as well as major aquatic consumers in YRE were collected. Since it takes sufficient time for tissues of consumers to reflect the isotopic signatures of food sources (<xref ref-type="bibr" rid="B43">Phillips et&#xa0;al., 2014</xref>), consumers must live under each condition for two to three months before sampling (<xref ref-type="bibr" rid="B62">Tieszen et&#xa0;al., 1983</xref>; <xref ref-type="bibr" rid="B61">Thomas et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B33">McIntyre and Flecker, 2006</xref>). Therefore, the samples collected in October corresponded to the flood season, and samples in April reflected the food source contribution in non-flood season (<xref ref-type="supplementary-material" rid="SM1">
<bold>Figure&#xa0;A1</bold>
</xref>).</p>
<p>Sampling was strictly carried out in accordance with GB17378.3-2007 marine monitoring specifications. At each sampling point, water quality indicators were measured using ISI-550A water quality detector. Surface sediment samples including microphytobenthos community were collected by a clam grab bucket, sieved wet on a 500-&#x3bc;m mesh screen, then freeze-dried. Phytoplankton were trawled vertically from the bottom to the surface using No.25 plankton nets with 0.064-mm aperture, and zooplankton were collected using a No.13 plankton net with 0.112-mm. Benthic organisms were collected by 0.5mm-diameter benthic bottom trawls and to collect the fish, shrimp and crabs of were collected by a 3-meter-long single bottom boat trawl. (Parameters of the trawl: the circumference and width of the trawl mouth is 30.6m and 8m, and the mesh size is 20mm). Fourteen fish species were collected, including dominant and important species <italic>Synechogobius hasta, Engraulis japonicus</italic> and <italic>Sillago sihama.</italic> The macroinvertebrate community were represented by three dominant species, namely <italic>Oratosquilla oratoria</italic>, <italic>Portunus trituberculatus</italic> and <italic>Fenneropenaeus chinensis</italic>, and three general species: <italic>Eriocheir sinensis, Mactra veneriformis</italic> and <italic>Meretrix meretrix.</italic> In laboratory, entire individuals of low trophic level organisms (e.g. phytoplankton and benthic macroalgae) were evenly divided into two parts. One half was acidified with 1 mol/L HCl to remove the inorganic carbon for &#x3b4;<sup>13</sup>C analysis, and the other half was prepared for &#x3b4;<sup>15</sup>N analysis. High trophic level organisms (e.g. fish) were analyzed by dorsal muscle tissues, which defatted in a solution of methanol, chloroform, and water (2:1:0.8) to avoid isotopically lighter fatty tissues (<xref ref-type="bibr" rid="B6">Bligh and Dyer, 1959</xref>). These samples were dried to constant weight in oven at 60-80 degrees Celsius for 48-72 hours, ground in a mortar, passed through a 0.178mm-diameter sieve, and stored in dry tin foil. Detailed sampling and sample preparation methods have been described in <xref ref-type="bibr" rid="B28">Liu et&#xa0;al. (2020)</xref>. The samples were first burned at high temperature in an EA-HT elemental analyzer to generate CO<sub>2</sub> or N<sub>2</sub>, and the <sup>13</sup>C/<sup>12</sup>C and <sup>15</sup>N/<sup>14</sup>N ratios were detected using a DELTA V Advantage isotope ratio mass spectrometer (Thermo Fisher Scientific, Inc., Bremen, Germany) and compared with international standards (Vienna Pee Dee Belemnite or Atm-N<sup>2</sup>) to calculate the stable isotope ratio of the sample (<xref ref-type="bibr" rid="B28">Liu et&#xa0;al., 2020</xref>). Formulas for stable isotope ratio estimation are shown as Eq. A1 and Eq. A2 in Appendices. The stable isotope values of each species are shown in <xref ref-type="supplementary-material" rid="SM1">
<bold>Table A2</bold>
</xref>.</p>
</sec>
<sec id="s2_3">
<label>2.3</label>
<title>Trophic level estimation and mixing model calculation</title>
<p>The consumer&#x2019;s trophic position (TP) was calculated as follows (<xref ref-type="bibr" rid="B18">Hussey et&#xa0;al., 2014</xref>):</p>
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<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:mrow>
</mml:math>
</disp-formula>
<disp-formula>
<label>(3)</label>    <mml:math display="block" id="M3">
<mml:mrow>
<mml:msup>
<mml:mtext mathvariant="bold-italic">&#x3b4;</mml:mtext>
<mml:mrow>
<mml:mn>15</mml:mn>
</mml:mrow>
</mml:msup>
<mml:msub>
<mml:mtext mathvariant="bold-italic">N</mml:mtext>
<mml:mrow>
<mml:mi>l</mml:mi>
<mml:mi>i</mml:mi>
<mml:mi>m</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mtext mathvariant="bold-italic">&#x3b2;</mml:mtext>
<mml:mn>0</mml:mn>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mtext mathvariant="bold-italic">&#x3b2;</mml:mtext>
<mml:mn>1</mml:mn>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
</disp-formula>
<p>where <bold>
<italic>&#x3b4;</italic>
</bold>
<sup>15</sup>
<bold>
<italic>N</italic>
</bold>
<italic>
<sub>TP</sub>
</italic> is the consumer&#x2019;s nitrogen stable isotope value, <bold>
<italic>&#x3b4;</italic>
</bold>
<sup>15</sup>
<bold>
<italic>N</italic>
</bold>
<italic>
<sub>lim</sub>
</italic> is the saturating isotope limit as TP increases, and <bold>
<italic>&#x3b4;</italic>
</bold>
<sup>15</sup>
<bold>
<italic>N</italic>
</bold>
<italic>
<sub>base</sub>
</italic> is the isotope value for a known baseline consumer in the food web. In this study, zooplankton was chosen as the known baseline consumer. <bold>
<italic>k</italic>
</bold> is the rate at which <bold>
<italic>&#x3b4;</italic>
</bold>
<sup>15</sup>
<bold>
<italic>N</italic>
</bold>
<italic>
<sub>TP</sub>
</italic> approaches <bold>
<italic>&#x3b4;</italic>
</bold>
<sup>15</sup>
<bold>
<italic>N</italic>
</bold>
<italic>
<sub>lim</sub>
</italic> per TP step, and <bold>
<italic>TP<sub>base</sub>
</italic>
</bold> is the TP of the baseline organism, which is set to 2 in this study (<xref ref-type="bibr" rid="B48">Post, 2002</xref>; <xref ref-type="bibr" rid="B18">Hussey et&#xa0;al., 2014</xref>). <italic>&#x3b2;</italic>
<sub>0</sub> = 5.92[4.55, 7.33], <italic>&#x3b2;</italic>
<sub>1</sub> = &#x2212;0.27[&#x2212;0.41, &#x2212;0.14],which are the 95% highest posterior median (HPM) uncertainty intervals (<xref ref-type="bibr" rid="B52">Reum et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B50">Qu et&#xa0;al., 2019</xref>). A paired two-sample t test was used to analyze the differences in TP of the same fish species in different hydrological periods and sampling areas, with P&lt; 0.05 as the significance level. The above statistical analysis was performed in SPSS Statistics 24.0.</p>
<p>Prior to the analysis of the contribution of the basal food sources, according to previous study on the similarity of the isotopic values (<xref ref-type="bibr" rid="B50">Qu et&#xa0;al., 2019</xref>), <italic>P. australis, S. heteropteran</italic> and <italic>T. chinensis</italic> were formed <italic>a priori</italic> combinations of sources representing terrestrial sources, so the number of sources was small enough to provide a unique solution. While ranges of feasible contributions for each individual source can often be quite broad, contributions from functionally related groups of sources can be summed a posteriori, producing a range of solutions for the aggregate source that may be considerably narrower (<xref ref-type="bibr" rid="B44">Phillips et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B38">Moore and Semmens, 2008</xref>).</p>
<p>In this study, a script version of Bayesian mixing model, MixSIAR, run on the R language platform (version 3.6.3) (<xref ref-type="bibr" rid="B51">R Development Core Team, 2013</xref>), was used to calculate the relative contribution of each basal food source for the diets of the consumers in different hydrological periods and regions (<xref ref-type="bibr" rid="B57">Stock et&#xa0;al., 2018</xref>). This model takes into account in the uncertainty of source values, categorical and continuous covariates, as well as prior information (<xref ref-type="bibr" rid="B55">Semmens et&#xa0;al., 2009</xref>). In this study, basal food sources were classified into 5 types: phytoplankton, macroalgae, MPB, <italic>S. alterniflora</italic> and TOM. During the mixing model calculations, we assumed trophic enrichment of 0.5 &#xb1; 1.54&#x2030; and 3.15 &#xb1; 1.31&#x2030; for &#x3b4;<sup>13</sup>C and &#x3b4;<sup>15</sup>N, respectively (<xref ref-type="bibr" rid="B22">Kiljunen et&#xa0;al., 2020</xref>). The distribution of the food sources contributions to consumer diets were generated by the Markov chain Monte Carlo (MCMC) method (<xref ref-type="bibr" rid="B55">Semmens et&#xa0;al., 2009</xref>). To construct the full energy flow food webs for the different hydrological periods and regions, not only the contribution ratio of basal food sources, the relative contribution ratio of potential food sources for each consumer was also calculated. The analysis of the food sources contributions required to first define the potential food sources of each consumer. The benthic macroinvertebrates were divided into two categories according to functional feeding groups (<xref ref-type="bibr" rid="B54">Ru et&#xa0;al., 2019</xref>). The first category was collector-scrapers, which included oligochaetes and snails, such as Corbiculidae and Naticidae, and larvae of the orders Ephemeroptera, Trichoptera, and Diptera. The second category included predator-shredders, including shrimps and crabs (<xref ref-type="bibr" rid="B26">Liu and Wang, 2008</xref>). According to the results from MixSIAR model, if the average contribution of basal food sources to one consumer was &#x2265; 20%, or the average contribution of potential food sources to one consumer was &#x2265; 10%, there were effective links between food sources and this consumer (<xref ref-type="bibr" rid="B5">Blanchette et&#xa0;al., 2014</xref>). Based on the effective links, the food web was constructed in each period at each sample site.</p>
<p>Five indicators were used to describe the structural characteristics of the food web: the number of nodes (S), which is the number of elements in the food web, indicating the species diversity; the links (L), which indicates the number of effective links in the food web; the maximum links (Max. L), which is the maximum number of possible links in the food web, indicating the complexity; the link density (D), which is the number of links/the number of species; and the connectance (C), which is the number of effective links/the maximum number of possible links, representing the connectivity (<xref ref-type="bibr" rid="B45">Pimm et&#xa0;al., 1991</xref>).</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<label>3</label>
<title>Results</title>
<sec id="s3_1">
<label>3.1</label>
<title>Carbon and nitrogen stable isotope in different species</title>
<p>In general, the signatures of the carbon stable isotopes between different food sources were significantly different, and these signatures had a consistent gradual increase from land to ocean. For the isotope ratios of the basal food sources, the &#x3b4;<sup>13</sup>C value was low in TOM (-24.30 to -23.00&#x2030;), MPB (-23.95 to -21.63&#x2030;) and phytoplankton (-23.60 to -20.05&#x2030;), and high in <italic>S. alterniflora</italic> (-15.72 to -14.66&#x2030;) and macroalgae (-14.26 to -10.74&#x2030;) (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref> and <xref ref-type="supplementary-material" rid="SM1">
<bold>Table A2</bold>
</xref>.). The &#x3b4;<sup>13</sup>C value of omnivorous fish (-22.76 to -10.27&#x2030;) were relatively higher, while that of filter-feeding fish were the lowest (-25.27 to -16.40&#x2030;). In flood season, the average &#x3b4;<sup>13</sup>C value of consumers on the southern shore was significantly lower than that of the northern shore (ANOVA, F = 8.948, p = 0.007, n = 25), while there were no significant differences during non-flood season (ANOVA, F = 0.056, p = 0.816, n = 22).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>&#x3b4;<sup>13</sup>C and &#x3b4;<sup>15</sup>N stable isotope values of primary sources and consumers (MPB, microphytobenthos; TOM, terrestrial organic matter) in different regions and season. (I) Flood season (II) Non-flood season; (NS) Northern shore; (SS) Southern shore.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g002.tif"/>
</fig>
<p>For the isotope ratios related to the trophic fractionation, &#x3b4;<sup>15</sup>N of the basal food sources were generally low, among which <italic>S. alterniflora</italic> had relatively high values (2.76 to 9.01&#x2030;), while those of phytoplankton were the lowest (2.03 to 6.00&#x2030;). Among the major consumers, &#x3b4;<sup>15</sup>N of fish were generally higher, and those of piscivorous fish (8.63 to 16.19&#x2030;) were the highest, followed by omnivorous fish (7.91 to 13.31&#x2030;). In non-flood season, the average &#x3b4;<sup>15</sup>N of consumers on the southern shore was slightly higher than that on the northern shore (ANOVA, F = 0.036, p = 0.816, n = 22). In flood season, the &#x3b4;<sup>15</sup>N of fish and invertebrate on the southern shore significantly decreased (ANOVA, F = 10.825, p = 0.003, n = 25), lower than those on the northern shore.</p>
</sec>
<sec id="s3_2">
<label>3.2</label>
<title>Food source contribution to major consumers</title>
<p>When calculating the contribution of the basal food source to the major consumers, fish were classified into three functional feeding groups, including filter-feeding, omnivorous and piscivorous group, and all the invertebrates were collected as one group. The fish were divided into three feeding groups: filter-feeding, omnivorous and piscivorous fish (<xref ref-type="bibr" rid="B56">Shan et&#xa0;al., 2013</xref>). The food habits of each consumer and the corresponding potential food sources are shown in <xref ref-type="supplementary-material" rid="SM1">
<bold>Table A3</bold>
</xref> and the contributions of the different food sources are shown in <xref ref-type="supplementary-material" rid="SM1">
<bold>Table A4</bold>
</xref>. It not only showed differences between fish and invertebrates, but also varied in different regions and hydrological periods.</p>
<p>In flood season, the main food sources of major consumers varied widely in different regions. <italic>S. alterniflora</italic> (18.9% to 31.1%) and MPB (7.3% to 51.9%) were the important food source to most species on the northern shore, while TOM (19.1% to 63.3%) contributed more on the southern shore (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>-<xref ref-type="fig" rid="f6">
<bold>6</bold>
</xref>, <xref ref-type="supplementary-material" rid="SM1">
<bold>Table A4</bold>
</xref>). Food sources for filter-feeding and omnivorous fish showed obviously spatial variations (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>, <xref ref-type="fig" rid="f4">
<bold>4</bold>
</xref>), while that for piscivorous fish had not shown significant differences between two shores (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5</bold>
</xref>). For fish, the contribution of TOM to filter-feeding, omnivorous and piscivorous fish decreased in turn, while MPB exhibited an opposite trend. For invertebrates, the contribution of macroalgae and TOM was higher than fish, while <italic>S. alterniflora</italic> contributed less as a food source (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Diet proportion of filter-feeding fish. (I) Flood season; (II) Non-flood season; (NS) Northern shore; (SS) Southern shore.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g003.tif"/>
</fig>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Diet Proportion of omnivorous fish. (I) Flood season; (II) Non-flood season; (NS) Northern shore; (SS) Southern shore.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g004.tif"/>
</fig>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Diet Proportion of piscivorous fish. (I) Flood season; (II) Non-flood season; (NS) Northern shore; (SS) Southern shore.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g005.tif"/>
</fig>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Diet Proportion of invertebrates. (I) Flood season; (II) Non-flood season; (NS) Northern shore; (SS) Southern shore.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g006.tif"/>
</fig>
<p>In the non-flood season, fish were more dependent on <italic>S. alterniflora</italic> (20.7% to 58.0%) than flood season, while the assimilation of MPB (5.5% to 11.4%) were lower. The invertebrates were more dependent on the input of TOM (42.2%) on southern shore, while macroalgae (32.4%) and <italic>S. alterniflora</italic> (28.9%) were main food sources on the northern shore (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6</bold>
</xref>).</p>
</sec>
<sec id="s3_3">
<label>3.3</label>
<title>Trophic positions of dominant species</title>
<p>TPs of the dominant species varied in different hydrological periods and sampling areas (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). The trophic levels of major consumers in the non-flood season were generally higher than that in the flood season (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>; <xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7</bold>
</xref>). Significant differences in the average TP of species between two shores appeared during the non-flood season (P&lt; 0.05) (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table A5</bold>
</xref>).</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Trophic positions of dominant species.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="2" align="left">Time</th>
<th valign="middle" rowspan="2" align="center">Region</th>
<th valign="middle" rowspan="2" align="center">Species</th>
<th valign="middle" rowspan="2" align="center">Abbreviation</th>
<th valign="middle" colspan="2" align="center">Trophic Position</th>
</tr>
<tr>
<th valign="middle" align="center">Mean</th>
<th valign="middle" align="center">Range</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" rowspan="27" align="left">Flood season</td>
<td valign="middle" rowspan="16" align="center">Northern shore</td>
<td valign="middle" align="left">
<italic>Fenneropenaeus chinensis</italic>
</td>
<td valign="middle" align="left">FC</td>
<td valign="top" align="center">2.29</td>
<td valign="top" align="center">2.14-2.45</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Portunus trituberculatus</italic>
</td>
<td valign="middle" align="left">PT</td>
<td valign="top" align="center">2.14</td>
<td valign="top" align="center">1.92-2.38</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Eriocheir sinensis</italic>
</td>
<td valign="middle" align="left">ES</td>
<td valign="top" align="center">2.34</td>
<td valign="top" align="center">2.12-2.57</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Oratosquilla oratoria</italic>
</td>
<td valign="middle" align="left">OO</td>
<td valign="top" align="center">3.26</td>
<td valign="top" align="center">2.95-3.59</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Liza haematocheila</italic>
</td>
<td valign="middle" align="left">LH</td>
<td valign="top" align="center">2.38</td>
<td valign="top" align="center">2.17-2.61</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Lateolabrax japonicus</italic>
</td>
<td valign="middle" align="left">LJ</td>
<td valign="top" align="center">2.96</td>
<td valign="top" align="center">2.73-3.21</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Synechogobius hasta</italic>
</td>
<td valign="middle" align="left">SH</td>
<td valign="top" align="center">5.12</td>
<td valign="top" align="center">4.68-5.62</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Silurus asotus</italic>
</td>
<td valign="middle" align="left">SA</td>
<td valign="top" align="center">3.80</td>
<td valign="top" align="center">3.63-3.98</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Cynoglossus semilaevis</italic>
</td>
<td valign="middle" align="left">CS</td>
<td valign="top" align="center">3.82</td>
<td valign="top" align="center">3.66-3.98</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Epinephelus bruneus</italic>
</td>
<td valign="middle" align="left">EB</td>
<td valign="top" align="center">3.88</td>
<td valign="top" align="center">3.67-4.10</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Paralichthys olivaceus</italic>
</td>
<td valign="middle" align="left">PO</td>
<td valign="top" align="center">4.20</td>
<td valign="top" align="center">4.13-4.27</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Hypophthalmichthys molitrix</italic>
</td>
<td valign="middle" align="left">HM</td>
<td valign="top" align="center">3.05</td>
<td valign="top" align="center">3.02-3.08</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Engraulis japonicus</italic>
</td>
<td valign="middle" align="left">EJ</td>
<td valign="top" align="center">2.84</td>
<td valign="top" align="center">2.81-2.86</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Cyprinus carpio</italic>
</td>
<td valign="middle" align="left">CyC</td>
<td valign="top" align="center">3.83</td>
<td valign="top" align="center">3.80-3.85</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Sillago sihama</italic>
</td>
<td valign="middle" align="left">SiS</td>
<td valign="top" align="center">2.72</td>
<td valign="top" align="center">2.69-2.75</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Carassius carassius</italic>
</td>
<td valign="middle" align="left">CaC</td>
<td valign="top" align="center">3.27</td>
<td valign="top" align="center">3.26-3.27</td>
</tr>
<tr>
<td valign="middle" rowspan="11" align="center">Southern shore</td>
<td valign="middle" align="left">
<italic>Mactra veneriformis</italic>
</td>
<td valign="middle" align="left">MV</td>
<td valign="top" align="center">2.42</td>
<td valign="top" align="center">2.33-2.51</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Portunus trituberculatus</italic>
</td>
<td valign="middle" align="left">PT</td>
<td valign="top" align="center">2.66</td>
<td valign="top" align="center">2.63-2.68</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Fenneropenaeus chinensis</italic>
</td>
<td valign="middle" align="left">FC</td>
<td valign="top" align="center">2.70</td>
<td valign="top" align="center">2.64-2.76</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Eriocheir sinensis</italic>
</td>
<td valign="middle" align="left">ES</td>
<td valign="top" align="center">2.46</td>
<td valign="top" align="center">2.40-2.53</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Liza haematocheila</italic>
</td>
<td valign="middle" align="left">LH</td>
<td valign="top" align="center">2.60</td>
<td valign="top" align="center">2.40-2.80</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Carassius carassius</italic>
</td>
<td valign="middle" align="left">CaC</td>
<td valign="top" align="center">2.85</td>
<td valign="top" align="center">2.61-3.10</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Cyprinus carpio</italic>
</td>
<td valign="middle" align="left">CyC</td>
<td valign="top" align="center">3.18</td>
<td valign="top" align="center">3.03-3.35</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Hypophthalmichthys molitrix</italic>
</td>
<td valign="middle" align="left">HM</td>
<td valign="top" align="center">2.87</td>
<td valign="top" align="center">2.66-3.11</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Silurus asotus</italic>
</td>
<td valign="middle" align="left">SA</td>
<td valign="top" align="center">3.37</td>
<td valign="top" align="center">3.28-3.47</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Synechogobius hasta</italic>
</td>
<td valign="middle" align="left">SH</td>
<td valign="top" align="center">4.34</td>
<td valign="top" align="center">4.31-4.36</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Lateolabrax japonicus</italic>
</td>
<td valign="middle" align="left">LJ</td>
<td valign="top" align="center">3.02</td>
<td valign="top" align="center">2.94-3.09</td>
</tr>
<tr>
<td valign="middle" rowspan="23" align="left">Non-flood season</td>
<td valign="middle" rowspan="14" align="center">Northern shore</td>
<td valign="middle" align="left">
<italic>Fenneropenaeus chinensis</italic>
</td>
<td valign="middle" align="left">FC</td>
<td valign="top" align="center">2.94</td>
<td valign="top" align="center">2.92-2.96</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Oratosquilla oratoria</italic>
</td>
<td valign="middle" align="left">OO</td>
<td valign="top" align="center">4.19</td>
<td valign="top" align="center">4.09-4.30</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Portunus trituberculatus</italic>
</td>
<td valign="middle" align="left">PT</td>
<td valign="top" align="center">3.25</td>
<td valign="top" align="center">3.14-3.36</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Mactra veneriformis</italic>
</td>
<td valign="middle" align="left">MV</td>
<td valign="top" align="center">2.27</td>
<td valign="top" align="center">2.22-2.31</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Meretrix meretrix</italic>
</td>
<td valign="middle" align="left">MM</td>
<td valign="top" align="center">2.66</td>
<td valign="top" align="center">2.50-2.81</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Cyprinus carpio</italic>
</td>
<td valign="middle" align="left">CyC</td>
<td valign="top" align="center">3.89</td>
<td valign="top" align="center">3.62-4.18</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Lateolabrax japonicus</italic>
</td>
<td valign="middle" align="left">LJ</td>
<td valign="top" align="center">3.93</td>
<td valign="top" align="center">3.73-4.15</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Carassius carassius</italic>
</td>
<td valign="middle" align="left">CaC</td>
<td valign="top" align="center">3.24</td>
<td valign="top" align="center">2.75-3.80</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Liza haematocheila</italic>
</td>
<td valign="middle" align="left">LH</td>
<td valign="top" align="center">2.93</td>
<td valign="top" align="center">2.75-3.12</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Synechogobius hasta</italic>
</td>
<td valign="middle" align="left">SH</td>
<td valign="top" align="center">3.50</td>
<td valign="top" align="center">3.49-3.52</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Pelteobagrus fulvidraco</italic>
</td>
<td valign="middle" align="left">PF</td>
<td valign="top" align="center">3.50</td>
<td valign="top" align="center">3.06-4.02</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Hypophthalmichthys molitrix</italic>
</td>
<td valign="middle" align="left">HM</td>
<td valign="top" align="center">2.97</td>
<td valign="top" align="center">2.96-2.99</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Channa argus</italic>
</td>
<td valign="middle" align="left">CA</td>
<td valign="top" align="center">2.74</td>
<td valign="top" align="center">2.50-3.00</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Silurus asotus</italic>
</td>
<td valign="middle" align="left">SA</td>
<td valign="top" align="center">3.03</td>
<td valign="top" align="center">2.51-3.66</td>
</tr>
<tr>
<td valign="middle" rowspan="9" align="center">Southern shore</td>
<td valign="middle" align="left">
<italic>Eriocheir sinensis</italic>
</td>
<td valign="middle" align="left">ES</td>
<td valign="top" align="center">3.25</td>
<td valign="top" align="center">3.11-3.39</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Mactra veneriformis</italic>
</td>
<td valign="middle" align="left">MV</td>
<td valign="top" align="center">2.85</td>
<td valign="top" align="center">2.72-2.99</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Meretrix meretrix</italic>
</td>
<td valign="middle" align="left">MM</td>
<td valign="top" align="center">3.11</td>
<td valign="top" align="center">2.98-3.25</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Paralichthys olivaceus</italic>
</td>
<td valign="middle" align="left">PO</td>
<td valign="top" align="center">3.67</td>
<td valign="top" align="center">3.34-4.04</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Cynoglossus semilaevis</italic>
</td>
<td valign="middle" align="left">CS</td>
<td valign="top" align="center">4.83</td>
<td valign="top" align="center">4.52-5.17</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Liza haematocheila</italic>
</td>
<td valign="middle" align="left">LH</td>
<td valign="top" align="center">3.56</td>
<td valign="top" align="center">3.33-3.82</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Lateolabrax japonicus</italic>
</td>
<td valign="middle" align="left">LJ</td>
<td valign="top" align="center">4.10</td>
<td valign="top" align="center">3.78-4.45</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Epinephelus bruneus</italic>
</td>
<td valign="middle" align="left">EB</td>
<td valign="top" align="center">3.89</td>
<td valign="top" align="center">3.89-4.26</td>
</tr>
<tr>
<td valign="middle" align="left">
<italic>Synechogobius hasta</italic>
</td>
<td valign="middle" align="left">SH</td>
<td valign="top" align="center">3.99</td>
<td valign="top" align="center">3.99-4.29</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>Comparison of trophic positions of fish species at different sampling sites during different hydrological season: (I) Flood season; (II) Non-flood season; (NS) Northern shore; (SS) Southern shore.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g007.tif"/>
</fig>
<p>Spatial changes in trophic levels varied among fish and invertebrates. For invertebrates, their TPs on the southern shore (3.06 to 3.07) were generally higher than those on the northern shore (2.51 to 2.56) (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). For fish, the trophic levels gradually increased from filter-feeding fish (2.87 to 2.97) to piscivorous fish (3.30 to 4.10) (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). On the northern shore, the average TP of fish in non-flood season was lower than that of flood season (&#x394;TP = 0.18), especially for the piscivorous fish (&#x394;TP = 0.48). On the southern shore, all function groups in fish assembles showed obvious increase in trophic levels from flood season to non-flood season, especially for omnivorous fish (&#x394;TP = 0.69).</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Mean trophic positions of functional feeding groups.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" rowspan="2" align="left">TP</th>
<th valign="middle" colspan="2" align="center">Flood season</th>
<th valign="middle" colspan="2" align="center">Non-flood season</th>
</tr>
<tr>
<th valign="middle" align="center">Northern shore</th>
<th valign="middle" align="center">Southern shore</th>
<th valign="middle" align="center">Northern shore</th>
<th valign="middle" align="center">Southern shore</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">invertebrates</td>
<td valign="middle" align="center">2.51</td>
<td valign="middle" align="center">2.56</td>
<td valign="middle" align="center">3.06</td>
<td valign="middle" align="center">3.07</td>
</tr>
<tr>
<td valign="middle" align="left">fish</td>
<td valign="middle" align="center">3.49</td>
<td valign="middle" align="center">3.27</td>
<td valign="middle" align="center">3.30</td>
<td valign="middle" align="center">4.01</td>
</tr>
<tr>
<td valign="middle" align="left">filter-feeding fish</td>
<td valign="middle" align="center">2.94</td>
<td valign="middle" align="center">2.87</td>
<td valign="middle" align="center">2.97</td>
<td valign="middle" align="center"/>
</tr>
<tr>
<td valign="middle" align="left">omnivorous fish</td>
<td valign="middle" align="center">3.16</td>
<td valign="middle" align="center">2.88</td>
<td valign="middle" align="center">3.39</td>
<td valign="middle" align="center">3.56</td>
</tr>
<tr>
<td valign="middle" align="left">piscivorous fish</td>
<td valign="middle" align="center">3.78</td>
<td valign="middle" align="center">3.58</td>
<td valign="middle" align="center">3.30</td>
<td valign="middle" align="center">4.10</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s3_4">
<label>3.4</label>
<title>Food web of different regions/periods </title>
<p>Based on the analysis results of potential food sources of each consumer, and the relative contributions of which in YRE, the structure of the food web energy flow in different hydrological periods and sampling areas were established. The values of the number of nodes (S), the links (L), the maximum links (Max. L), the link density (D), and the connectance (C) varied from 14 to 23, 16 to 35, 91 to 253, 1.14 to 1.59, and 0.14to 0.20, respectively. Expect for the C value, all of these topological indexes of food webs on the northern shore were higher than those on the southern shore, and they were higher in the flood season (<xref ref-type="fig" rid="f8">
<bold>Figures&#xa0;8</bold>
</xref>, <xref ref-type="fig" rid="f9">
<bold>9</bold>
</xref>; <xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>)</p>
<fig id="f8" position="float">
<label>Figure&#xa0;8</label>
<caption>
<p>Energy flow of food webs for each sampling site during the flood and non-flood seasons. Arrow thickness represented the probability of the food source contributed to an upper consumer. (I)Flood season; (II)Non-flood season; (NS)Northern shore; (SS)Southern shore (abbreviation in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g008.tif"/>
</fig>
<fig id="f9" position="float">
<label>Figure&#xa0;9</label>
<caption>
<p>Five topological indexes of food webs in different regions/periods: (I)Flood season; (II)Non-flood season; (NS)Northern shore; (SS)Southern shore (S*, L*, Max.L*, D* and C* represented the vector normalization value of S, L, Max.L, D and C, respectively).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-10-1103502-g009.tif"/>
</fig>
<table-wrap id="T3" position="float">
<label>Table&#xa0;3</label>
<caption>
<p>Metrics of the food web structure of different sampling sites during different hydrological periods.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">Time</th>
<th valign="middle" align="center">Region</th>
<th valign="middle" align="center">S</th>
<th valign="middle" align="center">L</th>
<th valign="middle" align="center">Max.L</th>
<th valign="middle" align="center">D</th>
<th valign="middle" align="center">C</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">Flood season</td>
<td valign="middle" align="center">Northern shore</td>
<td valign="middle" align="center">23</td>
<td valign="middle" align="center">35</td>
<td valign="middle" align="center">253</td>
<td valign="middle" align="center">1.52</td>
<td valign="middle" align="center">0.14</td>
</tr>
<tr>
<td valign="middle" align="left"/>
<td valign="middle" align="center">Southern shore</td>
<td valign="middle" align="center">17</td>
<td valign="middle" align="center">27</td>
<td valign="middle" align="center">136</td>
<td valign="middle" align="center">1.59</td>
<td valign="middle" align="center">0.20</td>
</tr>
<tr>
<td valign="middle" align="left"/>
<td valign="middle" align="center">Mean</td>
<td valign="middle" align="center">20</td>
<td valign="middle" align="center">31</td>
<td valign="middle" align="center">194.5</td>
<td valign="middle" align="center">1.55</td>
<td valign="middle" align="center">0.17</td>
</tr>
<tr>
<td valign="middle" align="left">Non-flood season</td>
<td valign="middle" align="center">Northern shore</td>
<td valign="middle" align="center">19</td>
<td valign="middle" align="center">26</td>
<td valign="middle" align="center">171</td>
<td valign="middle" align="center">1.37</td>
<td valign="middle" align="center">0.15</td>
</tr>
<tr>
<td valign="middle" align="left"/>
<td valign="middle" align="center">Southern shore</td>
<td valign="middle" align="center">14</td>
<td valign="middle" align="center">16</td>
<td valign="middle" align="center">91</td>
<td valign="middle" align="center">1.14</td>
<td valign="middle" align="center">0.18</td>
</tr>
<tr>
<td valign="middle" align="left"/>
<td valign="middle" align="center">Mean</td>
<td valign="middle" align="center">16.5</td>
<td valign="middle" align="center">21</td>
<td valign="middle" align="center">131</td>
<td valign="middle" align="center">1.26</td>
<td valign="middle" align="center">0.16</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>S is the number of nodes, L is the effective links, Max. L is the maximum links, D the link density(L/S), and C is the connectance (L/Max. L).</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<label>4</label>
<title>Discussion</title>
<sec id="s4_1">
<label>4.1</label>
<title>Influence of upstream input on basal food sources in YRE</title>
<p>Yellow river estuary ecosystem, affected by both runoff and ocean tides, relied on the combination of terrestrial, intertidal and subtidal (autochthonous producers) basal food sources (<xref ref-type="bibr" rid="B50">Qu et&#xa0;al., 2019</xref>). Stable isotope ratios of carbon (&#x3b4;<sup>13</sup>C) and nitrogen (&#x3b4;<sup>15</sup>N), which indicated an increase from land to sea (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>), not only provided information on the bionomic and scenopoetic axes of the ecological niche (<xref ref-type="bibr" rid="B39">Newsome et&#xa0;al., 2007</xref>), but also clarified the division of food sources (<xref ref-type="bibr" rid="B8">Cucherousset and Vill&#xe9;ger, 2015</xref>). In this study, the spatio-temporal variations in the carbon stable isotope values of the food web components could be related to the changes in hydrological environment induced by the artificial flood peak. Consequently, the relative contributions of basal food sources to consumers varied along with time and space (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>-<xref ref-type="fig" rid="f6">
<bold>6</bold>
</xref>).</p>
<p>In non-flood season, consumers were more dependent on intertidal carbon sources than terrestrial and subtidal sources (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>-<xref ref-type="fig" rid="f6">
<bold>6</bold>
</xref>). <italic>S. alterniflora</italic> with C4 characteristics inhabited in a unique position of intertidal zone with higher flooding frequency than the other terrestrial vegetation with C3 characteristics located in the higher tide zone. For this reason, suspended debris from <italic>S. alterniflora</italic> was considered to be the main external food source in the intertidal zone, and other C3 vegetation became the terrestrial source imported from rivers (<xref ref-type="bibr" rid="B70">Yu et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B9">Cui et&#xa0;al., 2011</xref>). Compared with autochthonous producers (such as MPB and phytoplankton), <italic>S. alterniflora</italic> with a long growth cycle and high reproductive capacity, have strong competitive ability and relatively easily become a more stable food source (<xref ref-type="bibr" rid="B34">Meng et&#xa0;al., 2020</xref>). Moreover, <italic>S. alterniflora</italic> contributed more to the diet of fishes than invertebrates. It might provide the fish better feeding opportunities and greater shelter for predation (<xref ref-type="bibr" rid="B10">Feng et&#xa0;al., 2015</xref>).</p>
<p>In flood season, the dominant basal food source shifted from <italic>S. alterniflora</italic> to autochthonous production sources and terrestrial organic matter carried with runoff from upstream. Autochthonous producers contributed more to consumers in response to greater nutrient inputs during high-flow pulse. High nutrients concentration (especially silicate) and low salinity provided viable habitat to microphytobenthos, promoting autochthonous productivity (<xref ref-type="bibr" rid="B42">Park et&#xa0;al., 2014</xref>). As a marine primary producer, MPB, rather than phytoplankton and macroalgae, had become the main autochthonous basal food source fueling the food web, contributing 10 ~ 40% more than the non-flood season (Table A4), which was consistent with previous research (<xref ref-type="bibr" rid="B50">Qu et&#xa0;al., 2019</xref>). That would be because that phytoplankton was very sensitive to environmental change, such as changes in turbidity, heavy metals, water temperature, and salinity (<xref ref-type="bibr" rid="B71">Zhou et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B27">Liu et&#xa0;al., 2012</xref>). In contrast, MPB hardly affected by light limitation and had higher productivity in high turbidity environment (<xref ref-type="bibr" rid="B37">Montani et&#xa0;al., 2003</xref>). By forming stable biofilms on the surface of macroalgae and sediment, MPB served as a more stable food source for estuary consumers (<xref ref-type="bibr" rid="B36">Middelburg et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B13">Hart and Lovvorn, 2003</xref>). Due to the increased turbid water outflow into the estuary, the higher incorporation of terrestrial-derived materials occurred. Consequently, the contribution of TOM improved significantly during the high-flow episode (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>, <xref ref-type="fig" rid="f4">
<bold>4</bold>
</xref> and <xref ref-type="fig" rid="f6">
<bold>6</bold>
</xref>; <xref ref-type="supplementary-material" rid="SM1">
<bold>Table A4</bold>
</xref>), which was inconsistent with the observation in the low turbidity estuary (<xref ref-type="bibr" rid="B23">Kundu et&#xa0;al., 2021</xref>). The contribution of TOM to invertebrate, filter-feeding, omnivorous and piscivorous fish decreased in turn, indicating that low-trophic-level consumers more tended to assimilate the allochthonous food (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>-<xref ref-type="fig" rid="f6">
<bold>6</bold>
</xref>). Terrestrial-derived materials were insufficient to percolate through the top level of food web in a short period (<xref ref-type="bibr" rid="B11">Garcia et&#xa0;al., 2019</xref>), and piscivorous fish might indirectly assimilated TOM by preying on secondary consumers.</p>
<p>In addition, the rapid increase in discharge and suspended sediment concentration exacerbated the spatial differences in the basal food sources supporting the food webs. TOM dominated the basal food sources to the consumers on the southern shore (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>, <xref ref-type="fig" rid="f4">
<bold>4</bold>
</xref> and <xref ref-type="fig" rid="f6">
<bold>6</bold>
</xref>), while MPB had considerable contribution to food web on the northern shore (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3</bold>
</xref>-<xref ref-type="fig" rid="f5">
<bold>5</bold>
</xref>). Most of the suspended sediment diffused to southward associated with intensive mixing by river and currents, providing sufficient terrestrial food source to the southern shore, while only a small part of sediment expanded to the northern shore (<xref ref-type="bibr" rid="B64">Wang et&#xa0;al., 2014</xref>). However, the northern shore was mainly affected by dilute water with large amounts of nutrients diffusing in the northwest direction, inducing high primary production in subtidal zone.</p>
</sec>
<sec id="s4_2">
<label>4.2</label>
<title>Consumers trophic levels response to food sources variation</title>
<p>The shift in diet of consumers would induce the changes in trophic levels, ultimately affecting the trophic structure of food web. In flood season, seasonal pulse of autochthonous primary production and large amount of terrestrial-derived material transported by river greatly enriched the abundance and diversity of basal food sources in estuary. At the same time, environmental disturbances including surged flow and concentrated sediment, fish would not overeat and exterminate intermediate predators (<xref ref-type="bibr" rid="B49">Power et al., 1995</xref>; <xref ref-type="bibr" rid="B32">McHugh et&#xa0;al., 2010</xref>). (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref> and <xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7</bold>
</xref>). These factors accounted for the decline in the average trophic level of major consumers in the flood season.</p>
<p>In addition, the input of flow with high sediment would have impacts on feeding behaviors of consumers, aggravating the spatial variations in food web structure. Large amounts of sediment were transported to the southern shore for a short period of time, inducing the gap of turbidity between the two shores expanding to more than 50NTU (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table A1</bold>
</xref>). The turbid water environment on the southern shore would severely limit the predation efficiency of the visual-hunting fish, whereas invertebrates that forage primarily through chemoreception were relatively less affected (<xref ref-type="bibr" rid="B29">Lunt and Smee, 2020</xref>; <xref ref-type="bibr" rid="B59">Szczepanek et&#xa0;al., 2021</xref>). Fish reduced their foraging on nekton species with high escape probability, relying more on plankton with slow-moving speed and terrestrial-derived detritus (<xref ref-type="bibr" rid="B14">Hecht and van der Lingen, 2015</xref>). Therefore, in flood season, the trophic positions of fish were much lower on southern shore, while that of invertebrate showed an opposite trend (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>).</p>
<p>The comparison of the trophic positions of the same species among different periods and regions indicated that TPs of some fish did not show significant change or changes to the trend (<xref ref-type="supplementary-material" rid="SM1">
<bold>Table A5</bold>
</xref>, <xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7</bold>
</xref>), indicating other energy pathways in the food web. The slight fluctuation of TPs, related to the changes in flow regimes and environmental conditions, had changed the feeding composition of fish to a certain extent, but did not cause extremely significant changes in the types of food consumed by the fish. These trends indicated that the food webs of stable ecosystems have complex structures and diverse food sources, and thus the trophic level does not easily produce large fluctuations.</p>
</sec>
<sec id="s4_3">
<label>4.3</label>
<title>Response of food web energy flow structure to environmental conditions</title>
<p>Individual species TP and overall food web structure provided powerful means for understanding effects of environmental disturbance to ecosystem. Based on the relative contribution rate of prey-predation relationship, the energy flow structure of the food web was constructed. Topological indicators of food webs varied with the changes in regional environmental characteristics and hydrological period, since the changes in dietary structure and trophic levels of consumers (<xref ref-type="fig" rid="f9">
<bold>Figure&#xa0;9</bold>
</xref>). Among five topological indices, the value of S and Max. L were relatively higher in the northern shore food web, while value of C performed differently. It indicated that the structure of food web on the northern shore was highly complex (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>). The complexity of the food web was positively related to the availability of food sources (<xref ref-type="bibr" rid="B25">Liew et&#xa0;al., 2018</xref>), implying that diet of consumers on the northern shore was more selective. Furthermore, the human activities and fishing had less impact on the northern shore than the southern shore, leading the former had higher species diversity (<xref ref-type="bibr" rid="B28">Liu et&#xa0;al., 2020</xref>). Corresponded with previous studies, robustness was linked strongly with connectance, which indicated negative relationship with species diversity in topological food webs (<xref ref-type="bibr" rid="B68">Yen et&#xa0;al., 2016</xref>). Therefore, the food web structure on the southern shore was more robust (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>). The upstream hydrological regulation contributed to the high input of TOM on the southern shore (<xref ref-type="bibr" rid="B67">Xu et&#xa0;al., 2013</xref>), increasing of links density among species. Despite of the low species abundance, the connectivity of food web was relatively higher. In the flood season, the spatial variations of topological food webs were exacerbated by the inflow and diffusion of freshwater and sediment. On the northern shore, the number of nodes(S), effective links(L) and links per unit of species abundance (D) were higher than that in non-flood season (<xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref>, <xref ref-type="fig" rid="f9">
<bold>Figure&#xa0;9</bold>
</xref>). Affected by diluted water spreading and artificial freshwater fish enhancement and releasing, nekton communities had tendency of accumulations in estuary, increasing the diversity of fish species (<xref ref-type="bibr" rid="B58">Sun et&#xa0;al., 2014</xref>). At the same time, the number of energy pathways among species increased, and the contribution of various food sources tended to be homogenized, which made the structure of food web more complex. High interspecific competition intensity in the system with high species richness would lead to the decrease of species density and hence the system robustness (<xref ref-type="bibr" rid="B21">Kaneryd et&#xa0;al., 2012</xref>). Thus, food web on the southern shore with high connectance might be more robust, despite of the relatively lower species richness. Furthermore, shorter food chains and higher proportion of omnivorous species would also enhance the robustness of food web (<xref ref-type="bibr" rid="B68">Yen et&#xa0;al., 2016</xref>).</p>
<p>This finding further implied that hydrological regulation changed the flow regime and water turbidity conditions, leading to the changes in food source contribution and trophic levels of major species. This series of variations ultimately affected the energy flow and the structure of the entire food web (<xref ref-type="bibr" rid="B49">Power et al., 1995</xref>; <xref ref-type="bibr" rid="B7">Cross et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B54">Ru et&#xa0;al., 2019</xref>). Further studies will carry out fatty acid biomarkers analysis, which will provide detailed tracking of carbon substrates in food webs not available to stable isotopes. Biomass and production of organisms have not been taken into account in this study, which can also enhance the further understanding of spatio-temporal variations of dynamic trophic structure.</p>
</sec>
</sec>
<sec id="s5" sec-type="conclusion">
<label>5</label>
<title>Conclusion</title>
<p>The influence of runoff on the estuarine ecosystem was quantified <italic>via</italic> stable isotope analysis and energy flow of the aquatic food web. The trophic structure and energy flow processes of the aquatic food web of a typical weak tide estuary, the Yellow River Estuary (YRE), was identified. The main causes effecting the food web of the YRE were analyzed. Different flow regime led to the spatio-temporal variations of the stable isotopic characteristics of aquatic life. The southern shore was highly affected by the high-flow events, resulting in a decrease in the stable isotope values of organisms. And the spatial variation of topological food webs was exacerbated by the inflow and diffusion of freshwater and sediment during the flood season. Due to the high turbid environment on the southern shore, fish reduced their foraging on nekton species with high escape probability relying more on TOM, leading to lower trophic levels. The higher contribution of TOM to consumers increased the link density of food web on the southern shore, making it a more robust system. The high diversity of food sources and aquatic species made the food web more complex on the northern shore.</p>
</sec>
<sec id="s6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Material</bold>
</xref>. Further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>QL and JS conducted the sampling work. QL and FZ analysed the samples and data. YY, FZ, QL and JS wrote the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>This study was supported by the National Natural Science Foundation of China (52025092, U2243236), and the National Key Research and Development Program of China (2022YFC3202002).</p>
</sec>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2023.1103502/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2023.1103502/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet_1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
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