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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2022.780318</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Ecological Functions of Polychaetes Along Estuarine Gradients</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Martins</surname> <given-names>Amanda Domingues</given-names></name>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1473118/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Barros</surname> <given-names>Francisco</given-names></name>
<uri xlink:href="http://loop.frontiersin.org/people/520066/overview"/>
</contrib>
</contrib-group>
<aff><institution>Laborat&#x00F3;rio de Ecologia Bent&#x00F4;nica, CIENAM and Instituto de Biologia and INCT Estudos Interdisciplinares e Transdisciplinares em Ecologia e Evolu&#x00E7;&#x00E3;o, Universidade Federal da Bahia</institution>, <addr-line>Salvador</addr-line>, <country>Brazil</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Susana Carvalho, King Abdullah University of Science and Technology, Saudi Arabia</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Nafsika Papageorgiou, University of Crete, Greece; Sumit Mandal, Presidency University, India</p></fn>
<corresp id="c001">&#x002A;Correspondence: Amanda Domingues Martins, <email>martins.adomingues@gmail.com</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Marine Ecosystem Ecology, a section of the journal Frontiers in Marine Science</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>01</day>
<month>03</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>9</volume>
<elocation-id>780318</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>02</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2022 Martins and Barros.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Martins and Barros</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Function in ecology can be understood as the role that each component plays in the surrounding environment. It can be studied through the functional traits of organisms and depends on variations of abundance in time and space. Nevertheless, traits should be clearly associated with functions. The functions performed by estuarine macrofauna along estuarine gradients and its variation in time are scarcely studied. We expected that the functional structure (i.e., the set of functions in a site) would not change significantly over estuarine gradients, even with changes in taxonomic composition, since different taxa may have similar traits, allowing the performance of the same functions. We used polychaete assemblages along three tropical estuaries sampled four different times, to test for differences in functional intensity between estuarine salinity zones (Venice system). From a literature search we selected the most frequent ecological functions performed by estuarine benthic assemblages and we explicitly established which polychaete functional traits, or combinations of traits, were directly related to these functions. Nutrient cycling, bioturbation and fragmentation of organic matter were the most frequent functions. We discovered that the last two were present throughout the entire salinity gradient (i.e., along different salinity zones) but with different intensities. The intensity of functions may also show significant variability in time. Nutrient cycling and fragmentation of organic matter showed strong variation among estuarine zones. Using traits explicitly associated with ecological functions is necessary to investigate function and function intensity. Future studies should investigate how precisely traits may alter specific environmental characteristics and ecosystem properties.</p>
</abstract>
<kwd-group>
<kwd>ecosystem functioning</kwd>
<kwd>functional traits</kwd>
<kwd>estuarine macroinvertebrates</kwd>
<kwd>sediment</kwd>
<kwd>salinity gradient</kwd>
</kwd-group>
<counts>
<fig-count count="5"/>
<table-count count="3"/>
<equation-count count="0"/>
<ref-count count="91"/>
<page-count count="14"/>
<word-count count="9778"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1" sec-type="intro">
<title>Introduction</title>
<p>Function in ecology can be understood as the role that each component plays in the surrounding environment (i.e., control the fluxes of energy, nutrients, and organic matter) (<xref ref-type="bibr" rid="B19">Calow, 1987</xref>; <xref ref-type="bibr" rid="B39">Jax, 2005</xref>; <xref ref-type="bibr" rid="B10">Bellwood et al., 2019</xref>). But, in the ecological literature, the term is used in different ways depending on the scale (local or regional) and/or the object (individual, population, or ecosystem) (<xref ref-type="bibr" rid="B58">Nunes-Neto et al., 2013</xref>; <xref ref-type="bibr" rid="B54">Mlambo, 2014</xref>; <xref ref-type="bibr" rid="B68">Queir&#x00F3;s et al., 2015</xref>; <xref ref-type="bibr" rid="B20">Clare et al., 2016</xref>; <xref ref-type="bibr" rid="B48">Luiza-Andrade et al., 2017</xref>; <xref ref-type="bibr" rid="B30">Drylie et al., 2020</xref>). At the individual level, function is the role that an organism plays in the environment, and at the ecosystem level it refers to the combined effects of all natural processes that sustain an ecosystem and can result in global processes and ecosystem services (<xref ref-type="bibr" rid="B63">Paterson et al., 2012</xref>; <xref ref-type="bibr" rid="B73">Snelgrove et al., 2014</xref>; <xref ref-type="bibr" rid="B27">Degen et al., 2018</xref>).</p>
<p>Determining the roles that organisms play is important to identify key species and understand ecosystem functioning (<xref ref-type="bibr" rid="B15">Bremner, 2008</xref>). One way to access the ecological functions performed by species is to classify them into functional groups according to a set of characteristics, i.e., traits, that respond to certain environmental conditions (<xref ref-type="bibr" rid="B28">D&#x00ED;az and Cabido, 2001</xref>). These functional traits, for instance, may describe the way of life, feeding mode and reproduction strategies, which are associated with intrinsic biological characteristics as well as with activities that organisms perform in the ecosystem (<xref ref-type="bibr" rid="B85">Violle et al., 2007</xref>; <xref ref-type="bibr" rid="B26">de Bello et al., 2010</xref>).</p>
<p>The distribution of functional traits in a community can be a better indicator of ecosystem functioning than assemblage structure, including species abundance, richness and other metrics (e.g., <xref ref-type="bibr" rid="B13">Bolam et al., 2002</xref>). For instance, different species can have similar traits, thus performing similar functions. Therefore, functional redundancy may occur when in the absence of one taxon, another (with a similar set of traits) performs the same function (<xref ref-type="bibr" rid="B86">Walker, 1995</xref>; <xref ref-type="bibr" rid="B49">Magalh&#x00E3;es and Barros, 2011</xref>). On the other hand, species with different traits will perform different functions resulting in complementarity and in an increase of functional diversity (<xref ref-type="bibr" rid="B47">Loreau et al., 2001</xref>; <xref ref-type="bibr" rid="B37">Hillebrand and Matthiessen, 2009</xref>).</p>
<p>It is well known that benthic macroinvertebrates are very important for estuarine and marine habitats and that polychaetes are frequently an abundant and diverse group (<xref ref-type="bibr" rid="B38">Hutchings, 1998</xref>; <xref ref-type="bibr" rid="B49">Magalh&#x00E3;es and Barros, 2011</xref>; <xref ref-type="bibr" rid="B7">Barros et al., 2012</xref>). Due to their large morphological variability, they have an array of traits, including different feeding modes, movement capabilities and reproduction types. Through different trait combinations, polychaetes can perform several functions such as sediment stabilization, sediment oxygenation and transport of dissolved material from water to sediment (<xref ref-type="bibr" rid="B14">Braeckman et al., 2010</xref>; <xref ref-type="bibr" rid="B88">Wong and Dowd, 2015</xref>; <xref ref-type="bibr" rid="B89">Wrede et al., 2018</xref>; <xref ref-type="bibr" rid="B11">Bhowmik and Mandal, 2021</xref>). For example, the ability to burrow the sediment and construct tubes facilitates the penetration of water and oxygen, therefore increasing oxygenation (i.e., aeration function) of the sediment (<xref ref-type="bibr" rid="B1">Aller, 1988</xref>; <xref ref-type="bibr" rid="B72">Shull et al., 2009</xref>; <xref ref-type="bibr" rid="B44">Laverock et al., 2011</xref>; <xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>; <xref ref-type="bibr" rid="B68">Queir&#x00F3;s et al., 2015</xref>; <xref ref-type="bibr" rid="B56">Murphy and Reidenbach, 2016</xref>; <xref ref-type="bibr" rid="B90">Wrede et al., 2017</xref>). However, how these functions are distributed in space and time depends in part on how species, and thus, their functional traits, respond to environmental variations.</p>
<p>It is well known that estuaries are strong environmental gradients that are subject to great variability in their environmental conditions (e.g., salinity, grain size, and organic matter content) due to the mixing of freshwater and seawater (<xref ref-type="bibr" rid="B51">McLusky and Elliott, 2004</xref>). Different taxa interact with the physical and chemical characteristics of the environment, thus environmental variables can act as filters (e.g., <xref ref-type="bibr" rid="B31">Egres et al., 2019</xref>), selecting taxa with sets of traits that will occupy different estuarine regions. From this perspective, the environment is a selective force and filter, excluding species that are unable to tolerate certain conditions at a particular location (<xref ref-type="bibr" rid="B41">Kraft et al., 2015</xref>). Therefore, environmental variability plays an important role structuring estuarine benthic macroinvertebrate communities (<xref ref-type="bibr" rid="B2">Alves et al., 2020</xref>) and selecting traits (e.g., <xref ref-type="bibr" rid="B55">Morais et al., 2019</xref>).</p>
<p>The spatial patterns of benthic assemblages in estuaries has been described by several studies. For instance, lower estuarine regions have a greater number of taxa (<xref ref-type="bibr" rid="B91">Ysebaert et al., 2003</xref>; <xref ref-type="bibr" rid="B34">Fujii, 2007</xref>; <xref ref-type="bibr" rid="B7">Barros et al., 2012</xref>, <xref ref-type="bibr" rid="B5">2014</xref>; <xref ref-type="bibr" rid="B2">Alves et al., 2020</xref>) in part due to the fact that most species found in estuaries have a marine origin. Thus, sites closer to the marine waters are richer than sites closer to freshwater, as fewer estuarine species can arrive and/or survive in lower salinity (<xref ref-type="bibr" rid="B4">Attrill and Rundle, 2002</xref>). It has been suggested that changes of species along the salinity gradient can result in modifications in ecosystem functioning (<xref ref-type="bibr" rid="B61">Oug et al., 2012</xref>; <xref ref-type="bibr" rid="B79">van der Linden et al., 2016</xref>). However, most functional studies are focused on the effects of environmental impacts on traits (<xref ref-type="bibr" rid="B16">Bremner et al., 2003</xref>, <xref ref-type="bibr" rid="B17">2006a</xref>,<xref ref-type="bibr" rid="B18">b</xref>; <xref ref-type="bibr" rid="B62">Paganelli et al., 2012</xref>) and do not explore how these changes explicitly translate into different functions, or function intensities. Thus, the knowledge on how functions of the benthic community are distributed along estuaries and how it varies in time (e.g., weeks, months, seasons, or years) is still limited (<xref ref-type="bibr" rid="B23">Darr et al., 2014</xref>; <xref ref-type="bibr" rid="B79">van der Linden et al., 2016</xref>, <xref ref-type="bibr" rid="B80">2017</xref>).</p>
<p>There are a variety of ways to access the ecological function (<xref ref-type="bibr" rid="B64">Petchey and Gaston, 2002</xref>; <xref ref-type="bibr" rid="B66">Podani and Schmera, 2006</xref>; <xref ref-type="bibr" rid="B84">Vill&#x00E9;ger et al., 2008</xref>; <xref ref-type="bibr" rid="B65">Pla et al., 2012</xref>). However, they often consider ecological function as an emerging property of the community, and the information on which taxa or trait play an important role for a given function is frequently overlooked (<xref ref-type="bibr" rid="B78">Teal et al., 2009</xref>, <xref ref-type="bibr" rid="B77">2010</xref>; <xref ref-type="bibr" rid="B76">Sturdivant et al., 2012</xref>; <xref ref-type="bibr" rid="B67">Queir&#x00F3;s et al., 2013</xref>, <xref ref-type="bibr" rid="B68">2015</xref>). Many studies use species traits that are not linked to any function (<xref ref-type="bibr" rid="B54">Mlambo, 2014</xref>) and this can lead to wrong conclusions about the functioning and the fate of a given estuarine area. For example, the selection of excessive redundant traits can overestimate functional diversity. On the other hand, if an essential trait for a given function is not considered, this can lead to an underestimation of this function.</p>
<p>The aim of the present study was to investigate the distribution pattern of ecological functions over space and time in estuarine environments, through the use of combinations of specific functional traits. For this, we first: (i) defined combinations of functional traits explicitly related to ecological functions in estuaries; (ii) established the intensity of the functions performed by polychaetes; and (iii) tested for potential differences in the intensity of ecological functions in different salinity zones (following the Venice System). Our expectation was that the functional structure would not significantly change along the estuarine gradient (i.e., salinity zones). This expectation assumes that some subsets of taxa are spread along the estuarine gradients (<xref ref-type="bibr" rid="B2">Alves et al., 2020</xref>) and will contribute to the function maintenance.</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec id="S2.SS1">
<title>Description of the Ecological Functions and Functional Traits Associated</title>
<p>First, we reviewed the literature to identify which were the most important ecological functions for estuarine ecosystems and the sets of functional traits associated. The search was made in ISI Web of Knowledge database using the string: [(ecosyst&#x002A; OR ecolog&#x002A; OR estuar&#x002A;) AND (func&#x002A; OR trait&#x002A;)] AND (estuar&#x002A; OR environm&#x002A; OR marine OR salinity OR granulometry OR sediment) AND (gradient OR variation) AND (benth&#x002A;macro&#x002A; OR macrobenth&#x002A; OR macrozoobenth&#x002A; OR macroinvert&#x002A;). The search, in January of 2019, resulted in 535 articles. From this total, 99 were selected after screening according to the inclusion (studies that used benthic macroinvertebrates including polychaetes or molluscs or crustaceans and marine or estuarine ecosystems) and exclusion criteria (studies carried out in polar regions, lakes, including zooplankton, phytoplankton and studies that did not investigate ecological functions and did not use traits) (for more details see <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.1</xref>). We focused on polychaetes due to their abundance, functional importance in estuaries and also due to the availability of information on their traits.</p>
<p>We observed that five functions performed by estuarine benthic assemblages, were extensively reported by the literature: bioturbation, secondary production, sediment stabilization, nutrient cycling and organic matter fragmentation (<xref ref-type="table" rid="T1">Table 1</xref>). To soundly establish which functional traits of polychaetes have an effect on the estuarine environment, we carefully described, based on our review, how each function is linked to each specific trait, and also how the trait affected the estuarine environment (<xref ref-type="table" rid="T1">Table 1</xref> and see Appendix A.1 for reference listed). Through the revised literature we assume that each trait, or combination of traits, does not perform the function with the same intensity. For example, a polychaete that is tubicolous, very motile and large performs more bioturbation than a polychaete that is tubicolous, sedentary and small. Therefore, we assigned scores based on the affinity of each trait, or subsets of traits, with a given function, and a maximum score was attributed to the combination which best performed each function (see details in <xref ref-type="table" rid="T2">Table 2</xref>). For instance, a polychaete that is tubicolous, motile, with a large body, that feeds subsurface deposit and is infaunal received a higher score, while a minimum score was given to polychaetes that were only tubicolous (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
<table-wrap position="float" id="T1">
<label>TABLE 1</label>
<caption><p>Description of each ecological function used in this study, linked with specific polychaetes functional traits, and description of its effect on the estuarine ecosystem.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Function</td>
<td valign="top" align="left">Trait</td>
<td valign="top" align="left">Description of the trait</td>
<td valign="top" align="left">Effect</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><bold>Bioturbation</bold><break/> These processes include both particle reworking and burrow ventilation. Reworking sediment consist in moving/mixing sediment particles in benthic habitats and ventilation contribute to oxygen penetration in the lower layers of the sediment (<xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>)</td>
<td valign="top" align="left">Tubicolous</td>
<td valign="top" align="left">Organisms that construct temporary or permanent tubes and that are capable of reconstructing or extending them</td>
<td valign="top" align="left">The construction of tubes increase the area for solute exchange between the sediment and water column. Ventilation of the tubes facilitates the transport of oxidized compounds (e.g., O<sub>2</sub> and NO<sub>3</sub>) from the water column to the deep sediment and complementary output of bacterial mineralization products (<xref ref-type="bibr" rid="B1">Aller, 1988</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Burrow construction</td>
<td valign="top" align="left">Organisms that dig the sediment and build galleries/burrows</td>
<td valign="top" align="left">Burrowing animals mixing sediment and porewater, increasing the effective area of diffusive exchange between oxidizing and reducing environments (<xref ref-type="bibr" rid="B72">Shull et al., 2009</xref>; <xref ref-type="bibr" rid="B29">Dornhoffer et al., 2012</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Discretely motile</td>
<td valign="top" align="left">Organism may move for foraging but usually does not move when feeding</td>
<td valign="top" align="left">The movement of the body of organisms in contact with sediment provides the movement and mixing of particles and have a greater capacity to ventilate the lower layers, since they are moving inside their tubes or galleries and can still ventilate adjacent regions when they change their position (<xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Motile</td>
<td valign="top" align="left">Organism capable of moving around (not sessile)</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Subsurface deposit feeders</td>
<td valign="top" align="left">Organism that feeds on debris and organic matter present below the sediments surface</td>
<td valign="top" align="left">Digging the sediment in search of food in the lower layers, promotes mixing the sediment and water inflow (<xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Medium body size</td>
<td valign="top" align="left">Maximum body size between 2 and 20 cm</td>
<td valign="top" align="left">Medium or large organisms moving between the sediment particles to build tubes or galleries can mobilize a larger area of the sediment, generating more particle flow and promoting a larger area of exchange between the lower layers and water column contributing to more aeration of the sediment (<xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Large body size</td>
<td valign="top" align="left">Maximum body size greater than 20 cm</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Infaunal</td>
<td valign="top" align="left">Organism that lives in the sediments</td>
<td valign="top" align="left">Organisms that live buried in the lower layers of the sediment can promote the aeration of these layers when moving (<xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>)</td>
</tr>
<tr>
<td valign="top" align="left" colspan="4"><hr/></td>
</tr>
<tr>
<td valign="top" align="left"><bold>Stabilization of sediment</bold><break/> Species that promote capture and stabilization of the sediment particles and accumulation of organic matter (<xref ref-type="bibr" rid="B46">Little, 2000</xref>)</td>
<td valign="top" align="left">Tubicolous</td>
<td valign="top" align="left">Organisms that construct permanent tubes</td>
<td valign="top" align="left">Organisms that are constructors of permanent tubes and haven&#x2019;t got mobility, i.e., sessile can keep the format of compact sediment, contributing to the lower flow of particles. Since they already spend their lives inside the tubes and don&#x2019;t remobilize the sediment layers (<xref ref-type="bibr" rid="B32">Fager, 1964</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Sessile</td>
<td valign="top" align="left">Organisms that do not have locomotion capacity or have restricted mobility</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Suspension feeder</td>
<td valign="top" align="left">Organism that feed on particulate organic matter in suspension, including plankton</td>
<td valign="top" align="left">The organisms that are suspension feeders and have tentacles do not need to burrow for searching food and can only collect the particles that are suspended in the surface layers</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Tentacles</td>
<td valign="top" align="left">The structure of the tentacles is used to obtain the available food</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Large body size</td>
<td valign="top" align="left">Maximum body size greater than 20 cm</td>
<td valign="top" align="left">Organisms with large body size may form larger aggregations, enhancing the stabilization function</td>
</tr>
<tr>
<td valign="top" align="left" colspan="4"><hr/></td>
</tr>
<tr>
<td valign="top" align="left"><bold>Nutrient cycling in sediment</bold><break/> Ability to transport nutrients from the lower layers of the sediment to surface and or water column, contributing to the return of material to the upper layers and allowing nutrient recycling (<xref ref-type="bibr" rid="B24">Day et al., 1987</xref>)</td>
<td valign="top" align="left">Deposit feeders</td>
<td valign="top" align="left">Organism that feeds the debris and organic matter present on the substrate surface and lower layers of sediment</td>
<td valign="top" align="left">Deposit feeders eat particulate organic material and defecate sediment providing this material for the environment in different ways and this will serve as a nutrient for organisms other trophic levels</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Tubicolous</td>
<td valign="top" align="left">Organisms that construct temporary or permanent tubes and that are capable of reconstructing or extending them</td>
<td valign="top" align="left">Tube dwellers are able to transfer nutrients to the lower layers of the sediment, since after feeding these organisms can defecate in the surfaces of their tubes providing nutrients that can be remineralized by the bacteria attracted to the region close to the tubes (<xref ref-type="bibr" rid="B22">Colling et al., 2011</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Burrow construction</td>
<td valign="top" align="left">Organisms that burrow the sediment and build galleries/holes</td>
<td valign="top" align="left">Organisms that burrow the lower layers of the sediment promote the transfer of nutrients between the lower and superficial layers</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Discretely motile</td>
<td valign="top" align="left">Organism moves sometimes for better foraging but usually does not move when feeding</td>
<td valign="top" align="left">Organisms that have mobility are capable of transporting nutrients between the superficial and deeper layers of the sediment</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Motile</td>
<td valign="top" align="left">Organism moves, mainly to feed itself</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left" colspan="4"><hr/></td>
</tr>
<tr>
<td valign="top" align="left"><bold>Fragmentation of organic matter</bold><break/> Macerating and shredding large particles, producing small fragmented pieces of organic matter that will serve as a source of energy for other organisms (<xref ref-type="bibr" rid="B25">Day et al., 2013</xref>)</td>
<td valign="top" align="left">Deposit feeders</td>
<td valign="top" align="left">Organism that feeds off the debris and organic matter present on the substrate surface and lower layers of sediment</td>
<td valign="top" align="left">All these feeding modes contribute to the fragmentation of organic matter, since depositivore, herbivore and omnivore organisms will triturate and transform organic material into smaller particles</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Herbivore</td>
<td valign="top" align="left">Organism that feeds on macroalgae</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Omnivorous</td>
<td valign="top" align="left">An organism that feeds on a mixed diet, including plant and animal material</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Presence of jaw</td>
<td valign="top" align="left">Structure of the pharynx armed with jaw</td>
<td valign="top" align="left">Organism armed with jaws can reduce the particle size of detritus due to ingestion and passage through the digestive tract</td>
</tr>
<tr>
<td valign="top" align="left" colspan="4"><hr/></td>
</tr>
<tr>
<td valign="top" align="left"><bold>Secondary production</bold><break/> Energy supply to other trophic levels (<xref ref-type="bibr" rid="B25">Day et al., 2013</xref>)</td>
<td valign="top" align="left">Early maturity</td>
<td valign="top" align="left">Reproductive maturity less than 1 year</td>
<td valign="top" align="left">If the individual begins the reproductive age early more chances of reproductive events he has throughout his life, increasing secondary production</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">High fertility rate</td>
<td valign="top" align="left">More than 100,000 eggs per female and reproductive event</td>
<td valign="top" align="left">With high fertilization rate the organism produces more eggs, increasing the probability of reproductive success, contributing to system productivity</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Medium fertility rate</td>
<td valign="top" align="left">Between 2.500 and 20.000 eggs per female and reproductive event</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Large body size</td>
<td valign="top" align="left">Maximum body size greater than 20 cm</td>
<td valign="top" align="left">Maximum individual body size is directly related to productivity (<xref ref-type="bibr" rid="B70">Romero-Wetzel et al., 1991</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Medium life span</td>
<td valign="top" align="left">Life span between 3 and 5 years</td>
<td valign="top" align="left">Having a longer life expectancy, the body is able to absorb a greater amount of energy, contributing to the transfer of energy to the system for a long period and will have more chances of reproductive events throughout its life</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Long life span</td>
<td valign="top" align="left">Life span greater than 5 years</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">hermaphroditism</td>
<td valign="top" align="left">Organism produces gametes of the two sexes</td>
<td valign="top" align="left">Hermaphrodite organisms are more likely to reproduce since it may be faster to find a partner who can be male or female</td>
</tr>
<tr>
<td valign="top" align="left"/><td valign="top" align="left">Assexual<break/> reproduction</td>
<td valign="top" align="left">Independent of sexual reproduction processes, does not include recombination of parental genotypes, including all different types of asexual reproduction</td>
<td valign="top" align="left">Since reproduction is independent of the search for a partner, the chances of reproducing faster and more often are higher, contributing to the increase in secondary production</td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left"/><td valign="top" align="left"/><td valign="top" align="left"/></tr>
</tbody>
</table></table-wrap>
<table-wrap position="float" id="T2">
<label>TABLE 2</label>
<caption><p>Sets of traits that polychaetes must have to perform important ecological functions in estuaries.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="center">Smaller function intensity<hr/></td>
<td valign="top" align="left"/><td valign="top" align="left"/><td valign="top" align="left"/><td valign="top" align="left"/><td valign="top" align="center">Greater function intensity<hr/></td>
</tr>
<tr>
<td/>
<td valign="top" align="center">Score 1</td>
<td valign="top" align="center">Score 2</td>
<td valign="top" align="center">Score 3</td>
<td valign="top" align="center">Score 4</td>
<td valign="top" align="center">Score 5</td>
<td valign="top" align="center">Score 6</td>
</tr>
<tr>
<td valign="top" align="left" colspan="7"><hr/></td>
</tr>
<tr>
<td valign="top" align="left">Trait category</td>
<td valign="top" align="center" colspan="6">Set of traits</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="left" colspan="6"><bold>Bioturbation</bold></td>
</tr>
<tr>
<td valign="top" align="left">Type of movement</td>
<td valign="top" align="center">Tubicolous or burrowing</td>
<td valign="top" align="center">Tubicolous or burrowing</td>
<td valign="top" align="center">Tubicolous or burrowing</td>
<td valign="top" align="center">Tubicolous or burrowing</td>
<td valign="top" align="center">Tubicolous or burrowing</td>
<td valign="top" align="center">Tubicolous and burrowing</td>
</tr>
<tr>
<td valign="top" align="left">Mobility</td>
<td valign="top" align="center"/><td valign="top" align="center">Motile or discretely motile</td>
<td valign="top" align="center">Motile or discretely motile</td>
<td valign="top" align="center">Motile</td>
<td valign="top" align="center">Motile</td>
<td valign="top" align="center">Motile</td>
</tr>
<tr>
<td valign="top" align="left">Body size</td>
<td valign="top" align="center"/><td valign="top" align="center">Large body or<break/> medium body</td>
<td valign="top" align="center">Large body or<break/> medium body</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center">Large body</td>
</tr>
<tr>
<td valign="top" align="left">Feeding mode</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Subsurface deposit<break/> feeders or</td>
<td valign="top" align="center">Subsurface deposit<break/> feeders or</td>
<td valign="top" align="center">Subsurface deposit<break/> feeders and</td>
<td valign="top" align="center">Subsurface deposit<break/> feeders and</td>
</tr>
<tr>
<td valign="top" align="left">Sedimentary compartment</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Infaunal</td>
<td valign="top" align="center">Infaunal</td>
<td valign="top" align="center">Infaunal</td>
<td valign="top" align="center">Infaunal</td>
</tr>
<tr>
<td/>
<td valign="top" align="left" colspan="6"><bold>Secondary production</bold></td>
</tr>
<tr>
<td valign="top" align="left">Body size</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center">Large body</td>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Fertility rate</td>
<td valign="top" align="center"/><td valign="top" align="center">High fertility or<break/> medium fertility</td>
<td valign="top" align="center">High fertility or<break/> medium fertility</td>
<td valign="top" align="center">High fertility or<break/> medium fertility</td>
<td valign="top" align="center">High fertility or<break/> medium fertility</td>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">1st age of reproduction</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Early reproduction</td>
<td valign="top" align="center">Early reproduction</td>
<td valign="top" align="center">Early reproduction</td>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Life span</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Long or medium life span</td>
<td valign="top" align="center">Long or medium life span</td>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Reproduction Mode</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Assexual or hermaphroditism</td>
<td valign="top" align="center"/></tr>
<tr>
<td/>
<td valign="top" align="left" colspan="6"><bold>Sediment stabilization</bold></td>
</tr>
<tr>
<td valign="top" align="left">Type of movement</td>
<td valign="top" align="center">Tubicolous</td>
<td valign="top" align="center">Tubicolous</td>
<td valign="top" align="center">Tubicolous</td>
<td valign="top" align="center">Tubicolous</td>
<td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Mobility</td>
<td valign="top" align="center">Sessile</td>
<td valign="top" align="center">Sessile</td>
<td valign="top" align="center">Sessile</td>
<td valign="top" align="center">Sessile</td>
<td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Feeding mode</td>
<td valign="top" align="center"/><td valign="top" align="center">Suspension feeder</td>
<td valign="top" align="center">Suspension feeder</td>
<td valign="top" align="center">Suspension feeder</td>
<td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Food deliver</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Tentacle</td>
<td valign="top" align="center">Tentacle</td>
<td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Body size</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center">Large Body</td>
<td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td/>
<td valign="top" align="left" colspan="6"><bold>Nutrient cycling</bold></td>
</tr>
<tr>
<td valign="top" align="left">Feeding mode</td>
<td valign="top" align="center">Surface deposit<break/> feeder or</td>
<td valign="top" align="center">Surface deposit<break/> feeder or</td>
<td valign="top" align="center">Surface deposit<break/> feeder or</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td/>
<td valign="top" align="center">Subsurface deposit feeders</td>
<td valign="top" align="center">Subsurface<break/> deposit feeders</td>
<td valign="top" align="center">Subsurface deposit feeders</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Type of movement</td>
<td valign="top" align="center"/><td valign="top" align="center">Tubicolous or Burrowing</td>
<td valign="top" align="center">Tubicolous or Burrowing</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Mobility</td>
<td valign="top" align="center"/><td valign="top" align="center">Discretely motile</td>
<td valign="top" align="center">Motile</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td/>
<td valign="top" align="left" colspan="6"><bold>Organic matter fragmentation</bold></td>
</tr>
<tr>
<td valign="top" align="left">Feeding mode</td>
<td valign="top" align="center">Herbivorous or</td>
<td valign="top" align="center">Herbivorous or</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td/>
<td valign="top" align="center">Deposit feeders or</td>
<td valign="top" align="center">Deposit feeders or</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td/>
<td valign="top" align="center">Omnivorous</td>
<td valign="top" align="center">Omnivorous</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Jaw</td>
<td valign="top" align="center"/><td valign="top" align="center">Armed jaw</td>
<td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/><td valign="top" align="center"/></tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p><italic>Different sets of traits receive scores to perform each function and indicate the function intensity (see text).</italic></p></fn>
</table-wrap-foot>
</table-wrap>
<p>We built a matrix of polychaete family traits and a script in R (<xref ref-type="bibr" rid="B69">R Development Core Team, 2011</xref>; <xref ref-type="supplementary-material" rid="DS2">Supplementary Appendix B</xref>) that analyzed each line of this matrix, selected the families that had the traits of interest for each specific ecological function (as in <xref ref-type="table" rid="T1">Table 1</xref>), and assigned the informed score based on the combinations of traits (as in <xref ref-type="table" rid="T2">Table 2</xref>). The routine also assigned to every family the maximum possible score for each ecological function (see the detailed explanation in Appendix B). Finally, the scores of all functions were standardized to a range from 0 to 1 (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.2</xref>) since some functions presented six classes of possible trait combinations (i.e., bioturbation, <xref ref-type="table" rid="T2">Table 2</xref>) while others showed only two (i.e., fragmentation, <xref ref-type="table" rid="T2">Table 2</xref>). Thenceforth, the density (number of individuals per m<sup>2</sup>) of each taxa on each station was multiplied by the scores of ecological functions at this same station. Consequently, it was possible to obtain values representing the intensity of each ecological function along the estuaries (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.3</xref>).</p>
</sec>
<sec id="S2.SS2">
<title>Distribution of Ecological Functions</title>
<sec id="S2.SS2.SSS1">
<title>Data Acquisition</title>
<p>In order to access the distribution of benthic ecological functions throughout the estuarine ecosystem, the benthic assemblage fauna dataset, obtained from several research projects developed by Tropical Marine Ecology group,<sup><xref ref-type="fn" rid="footnote1">1</xref></sup> was used. This data set was partially published previously (e.g., <xref ref-type="bibr" rid="B5">Barros et al., 2014</xref>, <xref ref-type="bibr" rid="B6">2021</xref>; <xref ref-type="bibr" rid="B2">Alves et al., 2020</xref>).</p>
<p>We used the density (number of individuals per m<sup>2</sup>) of polychaete families along the salinity gradient of the estuaries of the Jaguaripe River (sampled on 05/2006, 08/2007, 07/2010, and 08/2014), Paragua&#x00E7;u River (05/2005, 12/2005, 06/2011, and 08/2014) and Suba&#x00E9; River (06/2004, 03/2006, 04/2011, and 03/2013) (<xref ref-type="fig" rid="F1">Figure 1</xref> and <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.4</xref>). Each estuary was sampled along 10 (Paragua&#x00E7;u and Jaguaripe) or 11 stations (Suba&#x00E9;) every single time. At each station, two sites 20&#x2013;50 m apart, were sampled. At each site, either three replicates were taken using a van Veen grab (0.054 m<sup>2</sup>) (in Paragua&#x00E7;u) or four replicates using cores (0.0078 m<sup>2</sup>) (in Suba&#x00E9; and Jaguaripe). Samples were sieved in the field using a 0.5 mm mesh, preserved with ethanol and transported to the lab. In the lab, samples were sorted and the invertebrates were mostly identified to family level. This taxonomic level has already been used to show precise ecological patterns (<xref ref-type="bibr" rid="B74">Souza and Barros, 2015</xref>) and previous works also used polychaete family for the analysis of biological traits (<xref ref-type="bibr" rid="B60">Otegui et al., 2016</xref>). The detailed sampling and processing methodology was published elsewhere (<xref ref-type="bibr" rid="B36">Hatje et al., 2006</xref>; <xref ref-type="bibr" rid="B8">Barros et al., 2008</xref>, <xref ref-type="bibr" rid="B7">2012</xref>; <xref ref-type="bibr" rid="B49">Magalh&#x00E3;es and Barros, 2011</xref>; see Appendix A.7 to complementary environmental data for each sampling station such granulometry and salinity). Furthermore, to investigate if there were differences in the functional intensity (i.e., the product of polychaetes density and polychaete function score) between the estuarine salinity zones, we adopted the Venice system to classify each sampling station in the salinity zone as euhaline (30&#x2013;40), polyhaline (18&#x2013;30), mesohaline (5&#x2013;18), and oligohaline (0.5&#x2013;5) (<xref ref-type="bibr" rid="B82">Venice System, 1958</xref>). The salinity data was obtained between 2004 and 2013, in different sampling occasions, using a calibrated water quality analyzer (Hydrolab DataSonde 4A, Loveland, Colorado, United States) and an optical refractometer (Instrutherm, model RTS-101 ATC, Loveland, Colorado, United States). In order to group the sampling stations of the different estuaries according to the Venice system, a cluster analysis was used based on Ward&#x2019;s criterion using untransformed salinity data based on the similarity matrix with Euclidean distance (see <xref ref-type="bibr" rid="B43">Krull et al., 2014</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Distribution of the sampling stations in Jaguaripe <bold>(A)</bold>, Paragua&#x00E7;u <bold>(B)</bold>, and Suba&#x00E9; <bold>(C)</bold> estuaries in Todos os Santos Bay, northeast of Brazil.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-09-780318-g001.tif"/>
</fig>
</sec>
<sec id="S2.SS2.SSS2">
<title>Data Selection</title>
<p>A matrix was constructed with the taxonomic classification of the polychaetes families and the presence or absence of selected functional traits (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.5</xref>). The elected functional traits of each taxa were assessed through literature search and online databases. The categories of traits such as feeding mode, food delivered, mobility, type of movement, sedimentary compartment and body size of each family were consulted mainly through the work of <xref ref-type="bibr" rid="B40">Jumars et al. (2015)</xref>. Traits associated to reproduction such as reproduction mode, egg size, age of first reproduction, life span, fecundity rate, and the trait material used for burrow construction were searched through the Polytraits database (<xref ref-type="bibr" rid="B33">Faulwetter et al., 2014</xref>), the Biological Traits Information Catalog - BIOTIC (<xref ref-type="bibr" rid="B50">Marine Life Information Network, 2006</xref>) and also through <xref ref-type="bibr" rid="B71">Rouse and Pleijel (2001)</xref>.</p>
</sec>
<sec id="S2.SS2.SSS3">
<title>Statistical Analysis</title>
<p>From the matrix of distributions of functions intensity (i.e., number of individuals per m<sup>2</sup> of each taxa on each station multiplied by the scores of ecological functions at this same station, see section &#x201C;Data Acquisition&#x201D;), a Bray-Curtis similarity matrix between stations at each estuary was created. Based on this matrix, in order to test for potential differences on function intensity at different zones and times within each estuary, a two-factor permutational multivariate analysis of variance (PERMANOVA) was performed using PRIMER v.6 software (<xref ref-type="bibr" rid="B21">Clarke and Warwick, 2001</xref>). Factors in these analyses were salinity zone (fixed with four levels: oligohaline, polyhaline, mesohaline and euhaline) and sampling dates (random with four levels, see section &#x201C;Data Acquisition&#x201D; for the specific sampling dates at each estuary). Additional PERMANOVA pair-wise tests (<xref ref-type="bibr" rid="B3">Anderson et al., 2008</xref>) were performed whenever necessary.</p>
</sec>
</sec>
</sec>
<sec id="S3" sec-type="results">
<title>Results</title>
<sec id="S3.SS1">
<title>Description of the Ecological Functions and Functional Traits Associated</title>
<p>The most important ecological functions performed by estuarine polychaetes were bioturbation of sediment, fragmentation of organic matter, stabilization of sediment, nutrient cycling and secondary production. A total of 11 categories of traits were used to describe these functions (type of movement, mobility, body size, feeding mode, food deliver, jaw, sedimentary compartment, fertility rate, first age of reproduction, life span, and reproduction mode; <xref ref-type="table" rid="T2">Table 2</xref>). Different traits and sets of traits were considered necessary for the organism to perform each ecological function with different intensities (i.e., scores in <xref ref-type="table" rid="T2">Table 2</xref>). For instance, to perform bioturbation the organism must be tubicolous or burrower (see <xref ref-type="table" rid="T2">Table 2</xref> Bioturbation, score 1) but, we observed that the function was greater, i.e., more intense, when the traits mobile or discretely mobile and medium or large body size were also present, since those features increase the amount of sediment being bioturbated (<xref ref-type="table" rid="T2">Table 2</xref>). The maximum score indicates high function intensity. In this sense, in the bioturbation case (Score 6) the highest intensity performance was achieved by a polychaete that is (i) tubicolous and burrower, (ii) motile, (iii) large, (iv) subsurface deposit feeder, and (v) infaunal (<xref ref-type="table" rid="T2">Table 2</xref> Bioturbation, score 6). The same framework was used to determine the intensity of the other functions.</p>
<p>Secondary production function was accessed through the combination of traits related to reproduction and body size. Large body size was considered an important trait, since the maximum size of an individual is directly related to productivity, and when associated with other traits (high or medium fertility rate, long or medium life span, asexual reproduction or hermaphroditism and early age of first reproduction) lead to an increase in intensity of this function (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
</sec>
<sec id="S3.SS2">
<title>Distribution of Ecological Functions</title>
<p>The distribution of functions varied across estuarine systems, zones and sampling dates (<xref ref-type="fig" rid="F2">Figure 2</xref>). Bioturbation and fragmentation of organic matter were present along the entire estuarine gradients showing similar patterns of variation within zones. Their intensities generally decreased in the middle estuary, in the polyhaline and/or mesohaline zones, and increased in the upper estuary (i.e., oligohaline zone). Nutrient cycling function decreased toward regions with lower salinities, especially in the Jaguaripe estuary (<xref ref-type="fig" rid="F2">Figure 2A</xref>). The intensity of sediment stabilization was generally very low and, when observed (i.e., 08/2007 and 07/2010 in Jaguaripe, 06/2004 in Suba&#x00E9; and all dates in Paragua&#x00E7;u estuary), was mainly found in lower and middle estuary (<xref ref-type="fig" rid="F2">Figure 2</xref>). The intensity of secondary production appeared to increase in lower salinity regions in the upper estuary. This function showed null or low intensity in mesohaline zones (<xref ref-type="fig" rid="F2">Figure 2</xref>). In a few stations, due to the absence of polychaetes, no ecological function was registered. This was mainly observed at some points of the Suba&#x00E9; estuary (<xref ref-type="fig" rid="F2">Figure 2C</xref>), but in the first station of Paragua&#x00E7;u (<xref ref-type="fig" rid="F2">Figure 2B</xref>, 08/2014) and in the last station of Jaguaripe (<xref ref-type="fig" rid="F2">Figure 2A</xref>, 05/2006).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Function intensities performed by polychaetes along the estuaries of Jaguaripe estuary <bold>(A)</bold>, Paragua&#x00E7;u <bold>(B)</bold>, and Suba&#x00E9; <bold>(C)</bold> at Todos os Santos Bay, Brazil, at different sampled occasions.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-09-780318-g002.tif"/>
</fig>
<p>The Jaguaripe estuary showed differences in functional structure among salinity zones (<italic>p</italic> = 0.0117), and the pairwise comparisons indicated significant differences between euhaline and oligohaline zones (<italic>p</italic> = 0.0012; <xref ref-type="table" rid="T3">Table 3A</xref> and <xref ref-type="fig" rid="F2">Figure 2A</xref>). The euhaline zone presented higher intensity of bioturbation, fragmentation, nutrient cycling, and lower secondary production (<xref ref-type="fig" rid="F2">Figure 2A</xref>). On the other hand, in the oligohaline zone an increase in secondary production intensity and a decrease in nutrient cycling was observed. Although variations of some functions have been observed along the Jaguaripe estuary, the only function that individually showed a significant difference along the salinity zones was nutrient cycling (<italic>p</italic> = 0.0004). Pairwise tests showed that nutrient cycling in euhaline and polyhaline zones was significantly larger than in the oligohaline zone (<italic>p</italic> = 0.0043 and <italic>p</italic> = 0.0014, respectively; <xref ref-type="fig" rid="F3">Figure 3</xref>, <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.6</xref> I. Jaguaripe).</p>
<table-wrap position="float" id="T3">
<label>TABLE 3</label>
<caption><p>Permanova test and pairwise comparisons testing differences in functional structure of polychaetes assemblages in <bold>(A)</bold> Jaguaripe, <bold>(B)</bold> Paragua&#x00E7;u, and <bold>(C)</bold> Suba&#x00E9; estuaries (&#x002A;<italic>p</italic> &#x003C; 0.05, &#x002A;&#x002A;<italic>p</italic> &#x003C; 0.01; &#x002A;&#x002A;&#x002A;<italic>p</italic> &#x003C; 0.001).</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Source</td>
<td valign="top" align="center">df</td>
<td valign="top" align="center">MS</td>
<td valign="top" align="center">Pseudo-F</td>
<td valign="top" align="center"><italic>P</italic>(perm)</td>
<td valign="top" align="center">Perms</td>
<td valign="top" align="center"><italic>P</italic>(MC)</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="7"><bold>(A) Jaguaripe</bold></td>
</tr>
<tr>
<td valign="top" align="left">Zone</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">5,635.2</td>
<td valign="top" align="center">27.622</td>
<td valign="top" align="center">0.0215</td>
<td valign="top" align="center">9932</td>
<td valign="top" align="center">0.0117&#x002A;</td>
</tr>
<tr>
<td valign="top" align="left">Sampling date</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">1,958.3</td>
<td valign="top" align="center">0.97913</td>
<td valign="top" align="center">0.4687</td>
<td valign="top" align="center">9932</td>
<td valign="top" align="center">0.4459</td>
</tr>
<tr>
<td valign="top" align="left">Zone &#x00D7; Sampling date</td>
<td valign="top" align="center">9</td>
<td valign="top" align="center">2,040.1</td>
<td valign="top" align="center">1.02</td>
<td valign="top" align="center">0.4594</td>
<td valign="top" align="center">9901</td>
<td valign="top" align="center">0.4452</td>
</tr>
<tr>
<td valign="top" align="left">Res</td>
<td valign="top" align="center">24</td>
<td valign="top" align="center">2,000</td>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">Total</td>
<td valign="top" align="center">39</td>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Pair-wise</bold></td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Salinity zones</bold></td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;Euhaline, oligohaline&#x002A;&#x002A;</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left" colspan="7"><bold>(B) Paragua&#x00E7;u</bold></td>
</tr>
<tr>
<td valign="top" align="left">Zone</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">5,259</td>
<td valign="top" align="center">1.5473</td>
<td valign="top" align="center">0.155</td>
<td valign="top" align="center">9934</td>
<td valign="top" align="center">0.1702</td>
</tr>
<tr>
<td valign="top" align="left">Sampling date</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">6,264</td>
<td valign="top" align="center">3.9474</td>
<td valign="top" align="center">0.001</td>
<td valign="top" align="center">9940</td>
<td valign="top" align="center">0.0017&#x002A;&#x002A;</td>
</tr>
<tr>
<td valign="top" align="left">Zone &#x00D7; Sampling date</td>
<td valign="top" align="center">9</td>
<td valign="top" align="center">3,398.9</td>
<td valign="top" align="center">2.1419</td>
<td valign="top" align="center">0.0033</td>
<td valign="top" align="center">9884</td>
<td valign="top" align="center">0.0046&#x002A;&#x002A;</td>
</tr>
<tr>
<td valign="top" align="left">Res</td>
<td valign="top" align="center">24</td>
<td valign="top" align="center">1,586.9</td>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">Total</td>
<td valign="top" align="center">39</td>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Pair-wise</bold></td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Zone</bold> &#x00D7; <bold>Sampling date</bold></td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>12_2005</bold></td>
<td/>
<td valign="top" align="left" colspan="2"><bold>2011</bold></td>
<td valign="top" align="left" colspan="3"><bold>2014</bold></td>
</tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;Euhaline and mesohaline&#x002A;</td>
<td/>
<td valign="top" align="left" colspan="2">Polyhaline and oligohaline&#x002A;&#x002A;&#x002A;</td>
<td valign="top" align="left" colspan="3">Polyhaline and oligohaline&#x002A;&#x002A;</td>
</tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;Euhaline and oligohaline&#x002A;&#x002A;</td>
<td/>
<td valign="top" colspan="2"/><td valign="top" colspan="3"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;Mesohaline, oligohaline&#x002A;&#x002A;</td>
<td/>
<td valign="top" colspan="2"/><td valign="top" colspan="3"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;Polyhaline and oligohaline&#x002A;&#x002A;&#x002A;</td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Pair-wise</bold></td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Polyhaline zone</bold></td>
<td valign="top" align="center" colspan="3"><bold>Oligohaline zone</bold></td>
<td/>
<td valign="top" colspan="2"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;12_2005, 2014&#x002A;</td>
<td valign="top" align="center" colspan="3">12_2005, 2014&#x002A;&#x002A;</td>
<td/>
<td valign="top" colspan="2"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;12_2005, 2011&#x002A;</td>
<td valign="top" align="center" colspan="3">12_2005, 2011&#x002A;&#x002A;</td>
<td/>
<td valign="top" colspan="2"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;05_2005, 2014&#x002A;</td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" colspan="2"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;05_2005, 2011&#x002A;</td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" colspan="2"/></tr>
<tr>
<td valign="top" align="left" colspan="7"><bold>(C) Suba&#x00E9;</bold></td>
</tr>
<tr>
<td valign="top" align="left">Zone</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">3,554.9</td>
<td valign="top" align="center">1.4752</td>
<td valign="top" align="center">0.1973</td>
<td valign="top" align="center">9934</td>
<td valign="top" align="center">0.1902</td>
</tr>
<tr>
<td valign="top" align="left">Sampling date</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">5,472.6</td>
<td valign="top" align="center">2.342</td>
<td valign="top" align="center">0.0115</td>
<td valign="top" align="center">9926</td>
<td valign="top" align="center">0.0155<bold>&#x002A;</bold></td>
</tr>
<tr>
<td valign="top" align="left">Zone &#x00D7; Sampling date</td>
<td valign="top" align="center">9</td>
<td valign="top" align="center">2,409.7</td>
<td valign="top" align="center">1.0312</td>
<td valign="top" align="center">0.4394</td>
<td valign="top" align="center">9895</td>
<td valign="top" align="center">0.4315</td>
</tr>
<tr>
<td valign="top" align="left">Res</td>
<td valign="top" align="center">28</td>
<td valign="top" align="center">2,336.7</td>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">Total</td>
<td valign="top" align="center">43</td>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Pair &#x2013; wise</bold></td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;<bold>Sampling date</bold></td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;2013, 2011&#x002A;</td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;2013, 2004&#x002A;</td>
<td valign="top" colspan="6"/></tr>
<tr>
<td valign="top" align="left">&#x2003;&#x2005;&#x2005;2011, 2004&#x002A;</td>
<td valign="top" colspan="6"/></tr>
</tbody>
</table></table-wrap>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p>Boxplot of Nutrient Cycling potential performed by polychaetes in different salinity zones along Jaguaripe estuary in all sampled occasions. Points represent the samples. The red asterisk represents the mean value and is shown by the numbers on the boxplots. The medians are represented by the dash in the middle of the boxplots and the error bar is represented by the vertical line.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-09-780318-g003.tif"/>
</fig>
<p>Paragua&#x00E7;u estuary showed a significant interaction between salinity zones and sampling dates (<italic>p</italic> = 0.0046; <xref ref-type="table" rid="T3">Table 3B</xref>). Fewer polychaete functions were performed in the oligohaline zone than in the euhaline zone in one occasion (12/2005; <italic>p</italic> = 0.008) and in the polyhaline zone in other two occasions (2011, <italic>p</italic> = 0.0007; 2014, <italic>p</italic> = 0.0015; <xref ref-type="table" rid="T3">Table 3B</xref> and <xref ref-type="fig" rid="F2">Figure 2B</xref>). The polyhaline zone in Paragua&#x00E7;u presented all the functions (three out of four times) but these functions decreased in the oligohaline zone along with the loss of sediment stabilization and a remarkable reduction in the secondary production. Nutrient cycling and fragmentation of organic matter showed significant differences for interaction between zone and sampling dates (<italic>p</italic> = 0.0007; <italic>p</italic> = 0.0026, respectively; see <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.6</xref> II. Paragua&#x00E7;u). For these two functions, pairwise tests for the polyhaline zone showed a significant difference in the two dates of 2005 in relation to 2011 and 2014 (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.6</xref> II. Paragua&#x00E7;u). The intensity of nutrient cycling and fragmentation of organic matter in the polyhaline zone was higher on the two most recent sampled occasions (<xref ref-type="fig" rid="F4">Figure 4</xref>). In these two sampling occasions, we also observed an increase in function intensity of the euhaline zone in direction to the polyhaline zone but a decline in mesohaline and oligohaline zones (<xref ref-type="fig" rid="F4">Figure 4</xref>). The bioturbation function showed a significant difference only for sampling dates (<italic>p</italic> = 0.0013; <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.6</xref> II. Paragua&#x00E7;u).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Boxplot of organic matter fragmentation and Nutrient Cycling estimated functions performed by polychaetes at different salinity zones and sampling dates along Paragua&#x00E7;u estuary. The medians are represented by the dash in the middle of the boxplots and the error bar is represented by the vertical line.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-09-780318-g004.tif"/>
</fig>
<p>Suba&#x00E9; estuary showed significant temporal differences in functional structure (<italic>p</italic> = 0.0155; <xref ref-type="table" rid="T3">Table 3C</xref> and <xref ref-type="fig" rid="F2">Figure 2C</xref>). The sampling date 2004 depicted a high variability in functional structure contrasting to the results from 2011 and 2013 (<xref ref-type="table" rid="T3">Table 3C</xref> and <xref ref-type="fig" rid="F2">Figure 2C</xref>). In addition, 2013 showed increases in the intensity of ecological functions, generally toward the upper estuary, except in point 2, thus differing from 2011 when there was a decrease in overall functions (<italic>p</italic> = 0.015; <xref ref-type="table" rid="T3">Table 3C</xref> and <xref ref-type="fig" rid="F2">Figure 2C</xref>).</p>
<p>The intensity of bioturbation, nutrient cycling and secondary production performed by polychaetes in the Suba&#x00E9; estuary showed significant variability among sampling dates (respectively, <italic>p</italic> = 0.0349, <italic>p</italic> = 0.001, and <italic>p</italic> = 0.0206; <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.6</xref> III.Suba&#x00E9;). While secondary production showed significant differences between the salinity zones (<italic>p</italic> = 0.0371) amidst the mesohaline with euhaline zones (<italic>p</italic> = 0.0142) and oligohaline zone (<italic>p</italic> = 0.0036), in general the oligohaline zone showed higher intensity for secondary production than the other zones (<xref ref-type="fig" rid="F5">Figure 5</xref>, <xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A; Table A.6</xref> III.Suba&#x00E9;).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption><p>Boxplot of Secondary production potential performed by polychaetes along salinity zones in Suba&#x00E9; estuary. Points represent the samples. The red asterisk represents the mean value and is shown by the numbers on the boxplots. The medians are represented by the dash in the middle of the boxplots and the error bar is represented by the vertical line.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-09-780318-g005.tif"/>
</fig>
</sec>
</sec>
<sec id="S4" sec-type="discussion">
<title>Discussion</title>
<p>Bioturbation, organic matter fragmentation and nutrient cycling were the most frequent functions performed by polychaetes along the estuarine systems, remaining present throughout the gradient but with variable intensities. Although bioturbation is frequently perceived as a small-scale phenomenon, this function has important roles in estuarine systems. For example, it causes topographic variation, increases in aeration and oxygenation of deep layers of sediment, directly affecting community metabolism, changes in organic content, reworking of sediments, reduction of sediment compaction and influences the fate of pollutants (metals, organic pollutants) (e.g., <xref ref-type="bibr" rid="B46">Little, 2000</xref>; <xref ref-type="bibr" rid="B35">Gray and Elliott, 2009</xref>; <xref ref-type="bibr" rid="B25">Day et al., 2013</xref>). Bioturbation is even more relevant in areas with muddy sediments, with low permeability, low concentrations of oxygen and a greater accumulation of contaminants (i.e., reduced water exchanges between sediments and water column) (<xref ref-type="bibr" rid="B36">Hatje et al., 2006</xref>; <xref ref-type="bibr" rid="B52">Mermillod-Blondin, 2011</xref>). In the three estuaries investigated, the highest percentage of fine sediments was found mainly in high salinity zones (<xref ref-type="bibr" rid="B7">Barros et al., 2012</xref>). Virtually all taxa identified in the three estuaries were classified as bioturbators, with the exception of two less frequent and abundant taxa (Sphaerodoridae and Sigalionidae). Trichobranchidae showed the highest score for bioturbation, being a subsurface deposit feeder, mobile, with a large body and tubicolous. These polychaetes can burrow the sediment in search of food in the lower layers and promote mixing of the sediment and water inflow (<xref ref-type="bibr" rid="B42">Kristensen et al., 2012</xref>; <xref ref-type="bibr" rid="B40">Jumars et al., 2015</xref>).</p>
<p>Fragmentation of organic matter also plays relevant roles such as reducing the particle size of detritus due to ingestion and passage through the digestive tract, increasing the susceptibility to microbial attack, enhancing rates of decomposition of detritus favoring active bacteria and mobilizing nutrients (<xref ref-type="bibr" rid="B25">Day et al., 2013</xref>). Nereididae was one of the most frequent and abundant taxa and, since they are omnivorous and have jaws, these organisms can reduce the particle size of detritus (<xref ref-type="bibr" rid="B40">Jumars et al., 2015</xref>). This taxon contributed to the maintenance of fragmentation intensity along the estuarine gradient. Bioturbation and fragmentation were performed more intensively in euhaline zones, decreasing in mesohaline but increasing in oligohaline zones. In this zone many polychaetes do not tolerate the low salinity conditions, therefore Nereididae can be found and are functionally crucial for increase the bioturbation and fragmentation in the upper estuary.</p>
<p>The variation of intensity in nutrient cycling along estuaries was similar to fragmentation, but frequently decreased in the upper estuary (i.e., oligohaline zone). Nutrient cycling increases nutrient fluxes, mobilization and transferring of nutrients between different sediment compartments (<xref ref-type="bibr" rid="B24">Day et al., 1987</xref>). Many taxa showed traits that allowed them to perform this function, contributing to the maintenance of nutrient cycling along the estuary. For example, Cirratulidae and Orbiniidae, which were quite frequent and more abundant in the lower estuary (e.g., euhaline and polyhaline zone), contributed to an increase in nutrient cycling in these zones. Additionally, Capitellidae (also abundant in these zones) were also found in the upper estuary (e.g., Oligohaline zones). Therefore, cirattulids and capitellids, being depositivorous, mobile, burrowing and infaunal, are especially important for cycling the nutrients in estuaries.</p>
<p>Stabilization of sediment, although less observed, was more frequent in the polyhaline zone and sometimes in the euhaline zone (i.e., Paragua&#x00E7;u and Suba&#x00E9; estuaries). It was performed by traits found in Sabellidae, Serpullidae, and Terebellidae. These taxa occurred in the lower Suba&#x00E9; and Paragua&#x00E7;u estuaries at one occasion and in the middle of Jaguaripe and Paragua&#x00E7;u estuaries. Sabellidae and Serpulidae share several traits, such as tentacular crown and the capacity for building mucous and sediment tubes. These taxa are sessile and suspension feeders like Terebellidae and largely dependent upon bottom currents to bring particles within range of their collecting systems (<xref ref-type="bibr" rid="B40">Jumars et al., 2015</xref>). In many large Sabellidae and Terebellidae, the tube is occupied permanently while serpulids can secrete calcareous tubes. Stabilization promotes resistance to erosion by water flow and may facilitate recruitment of some taxa (<xref ref-type="bibr" rid="B46">Little, 2000</xref>). We did not observe this function in the oligohaline zones, which are usually composed of coarser sediments (<xref ref-type="bibr" rid="B7">Barros et al., 2012</xref>) a result of strong currents which may not allow the construction of semi-permanent tubes.</p>
<p>Benthic secondary production in general is high in the estuarine system when compared with other aquatic ecosystems (<xref ref-type="bibr" rid="B25">Day et al., 2013</xref>). It controls the energy flow through the food web, supporting a high diversity of organisms in the sediments and water column (e.g., larger invertebrates, demersal nekton and wading and diving birds) (<xref ref-type="bibr" rid="B25">Day et al., 2013</xref>). This function may be affected by stresses of the estuarine environment, such as salinity variation (<xref ref-type="bibr" rid="B25">Day et al., 2013</xref>). Polychaete secondary production was remarkably smaller than bioturbation and fragmentation but increased in oligohaline zones, reaching similar proportions to those other functions in this region. Information about the reproductive traits of polychaetes is not always accessible and, since we did not use biomass but body size as a proxy, proper formal testes are needed for evaluating if secondary production in estuarine sediments is really more intense in the upper estuary.</p>
<p>There are a few studies on ecological function along estuarine gradients (<xref ref-type="bibr" rid="B61">Oug et al., 2012</xref>; <xref ref-type="bibr" rid="B60">Otegui et al., 2016</xref>; <xref ref-type="bibr" rid="B79">van der Linden et al., 2016</xref>) but they are mostly based in the variability of all biological traits (<xref ref-type="bibr" rid="B17">Bremner et al., 2006a</xref>,<xref ref-type="bibr" rid="B18">b</xref>; <xref ref-type="bibr" rid="B62">Paganelli et al., 2012</xref>; <xref ref-type="bibr" rid="B81">van der Linden et al., 2012</xref>, <xref ref-type="bibr" rid="B80">2017</xref>; <xref ref-type="bibr" rid="B83">Ver&#x00ED;ssimo et al., 2012</xref>; <xref ref-type="bibr" rid="B23">Darr et al., 2014</xref>; <xref ref-type="bibr" rid="B31">Egres et al., 2019</xref>). It has been suggested that the use of any functional traits can result in a redundant trait or in traits not necessarily related to the functions (<xref ref-type="bibr" rid="B54">Mlambo, 2014</xref>; <xref ref-type="bibr" rid="B9">Beauchard et al., 2017</xref>; <xref ref-type="bibr" rid="B48">Luiza-Andrade et al., 2017</xref>). Therefore, functions are often not explicitly addressed, neither are traits precisely associated with specific functions. Some studies use indexes that gather all traits information and calculate functional diversity in the environment (<xref ref-type="bibr" rid="B45">Lefcheck et al., 2015</xref>; <xref ref-type="bibr" rid="B79">van der Linden et al., 2016</xref>), but the interpretation of which function is varying might be complex.</p>
<p>The understanding of ecosystem functioning improves when we define how combinations of functional traits are related to specific functions and the mechanism by which these traits perform their roles (<xref ref-type="bibr" rid="B26">de Bello et al., 2010</xref>; <xref ref-type="bibr" rid="B9">Beauchard et al., 2017</xref>). In the present study, traits were clearly associated with function allowing the evaluation of function intensity along an ecological gradient.</p>
<p>Synthesizing information from the literature on which traits are associated with specific ecological functions is the first step for experiments to be performed and to actually test the effect of specific functional traits on sedimentary processes and ecosystem properties (<xref ref-type="bibr" rid="B26">de Bello et al., 2010</xref>; <xref ref-type="bibr" rid="B54">Mlambo, 2014</xref>). Much experimental work is needed to evaluate who (i.e., trait) does what (i.e., function) and at which intensity. For instance, experiments measuring how the movement of an organism, when building galleries and feeding on deposits, will affect the fragmentation of organic matter, are necessary.</p>
<p>This study showed that the distribution of ecological functions is dynamic, and varies in time and space. Variability was observed in the patterns of functions at different times, especially in the estuaries of Paragua&#x00E7;u and Suba&#x00E9;. where the intensity of some polychaetes functions increased in time. In the Paragua&#x00E7;u estuary, the change in sediment stabilization in the different sampling dates along the salinity zones was marked. This may be caused by differences in hydrodynamical regimes which shows the demand for research investigating the drivers of variation in function intensity under different situations (e.g., low to extreme river flows).</p>
<p>Biological assemblages and their distribution of functional traits determine the roles that will be performed at each environment and make possible to predict how the environment might recover from different disturbances (e.g., dredging event, dam construction) (<xref ref-type="bibr" rid="B26">de Bello et al., 2010</xref>; <xref ref-type="bibr" rid="B12">Bolam, 2014</xref>). For instance, functional redundancy allows the function to continue to be performed (<xref ref-type="bibr" rid="B87">Walker et al., 2004</xref>; <xref ref-type="bibr" rid="B59">Olsgard et al., 2008</xref>; <xref ref-type="bibr" rid="B49">Magalh&#x00E3;es and Barros, 2011</xref>). That is, even in the absence of a taxon, due to some disturbance, there may be other species with similar traits capable of keeping the function (i.e., functional compensation; <xref ref-type="bibr" rid="B86">Walker, 1995</xref>; <xref ref-type="bibr" rid="B57">Naeem, 1998</xref>). Thus, ecological functions are indicative of ecosystem health and resilience and are intrinsically related to various ecosystem services that benefit society (<xref ref-type="bibr" rid="B53">Millennium Ecosystem Assessment, 2005</xref>; <xref ref-type="bibr" rid="B75">Strong et al., 2015</xref>).</p>
<p>It is important to investigate how each set of environmental characteristics (e.g., salinity, particle size, and organic matter) and how human impacts can affect the distribution of ecological functions. Using traits associated with specific ecological functions, rather than all available traits, allows one to observe patterns of function variation in space and time. Future studies may investigate how each function responds to different variables and also empirically test how traits alter environmental characteristics (sediment oxygenation, nutrient content) and ecosystem properties (resilience).</p>
</sec>
<sec id="S5" sec-type="data-availability">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="supplementary-material" rid="DS1">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="S6">
<title>Author Contributions</title>
<p>AM: conceptualization, formal analysis, data curation, methodology, and writing &#x2013; original draft. FB: supervision, conceptualization, formal analysis, data curation, methodology, and writing &#x2013; review and editing. Both authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="conf1" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="pudiscl1" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<sec id="S7" sec-type="funding-information">
<title>Funding</title>
<p>The data were generated with different research projects funded by CNPq (Grants 302642/2008-0; 306332/2014-0; 304907/2017-0; 478265/2008-5; 405793/2016-2; and 441264/2017-4; INCT IN-TREE) and by FAPESB (PET 0035). FB was supported by CNPq (PQ 306332/2014-0; 304907/2017-0).</p>
</sec>
<ack>
<p>We thank the Instituto Kirimur&#x00EA; Ba&#x00ED;a de Todos os Santos for their support and facilities. ATA is thankful to Coordena&#x00E7;&#x00E3;o de Aperfei&#x00E7;oamento de Pessoal de N&#x00ED;vel Superior (CAPES). We gratefully acknowledge Jo&#x00E3;o Bosco Leite Gusm&#x00E3;o Junior and Igor Cristino Silva Cruz for helping with suggestions on an early version of this manuscript and Amanda Campos for helping with the data analysis. We also thank the Laborat&#x00F3;rio de Ecologia Bent&#x00F4;nica team involved in the fieldwork and sample processing which generated the data used in this manuscript.</p>
</ack>
<sec id="S9" sec-type="supplementary-material">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2022.780318/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2022.780318/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.xlsx" id="DS1" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Data_Sheet_2.PDF" id="DS2" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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