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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2021.776965</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Participatory Risk Assessment of Humpback Whale (<italic>Megaptera novaeangliae</italic>) and Leatherback Turtle (<italic>Dermochelys coriacea</italic>) Bycatch in Northern Peru</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Costanza</surname> <given-names>Anna B.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1324644/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Guidino</surname> <given-names>Chiara</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1518092/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Mangel</surname> <given-names>Jeffrey C.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/581154/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Alfaro-Shigueto</surname> <given-names>Joanna</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Verutes</surname> <given-names>Gregory</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Caillat</surname> <given-names>Marjolaine</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Samanta</surname> <given-names>Aritree</given-names></name>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1488607/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Hines</surname> <given-names>Ellen</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/189865/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Estuary and Ocean Science Center, San Francisco State University</institution>, <addr-line>Tiburon, CA</addr-line>, <country>United States</country></aff>
<aff id="aff2"><sup>2</sup><institution>ProDelphinus</institution>, <addr-line>Lima</addr-line>, <country>Peru</country></aff>
<aff id="aff3"><sup>3</sup><institution>Carrera de Biologia Marina, Universidad Cientifica del Sur</institution>, <addr-line>Lima</addr-line>, <country>Peru</country></aff>
<aff id="aff4"><sup>4</sup><institution>Centre for Ecology and Conservation, University of Exeter</institution>, <addr-line>Penryn</addr-line>, <country>United Kingdom</country></aff>
<aff id="aff5"><sup>5</sup><institution>CRETUS-Department of Applied Economics, University of Santiago de Compostela</institution>, <addr-line>Santiago de Compostela</addr-line>, <country>Spain</country></aff>
<aff id="aff6"><sup>6</sup><institution>School of Public Affairs and Civic Engagement, San Francisco State University</institution>, <addr-line>San Francisco, CA</addr-line>, <country>United States</country></aff>
<aff id="aff7"><sup>7</sup><institution>Department of Geography &#x0026; Environment, San Francisco State University</institution>, <addr-line>San Francisco, CA</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Andre Eric Punt, University of Washington, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Scott Robert Benson, National Marine Fisheries Service (NOAA), United States; Tara Sayuri Whitty, Independent Researcher, United States</p></fn>
<corresp id="c001">&#x002A;Correspondence: Anna B. Costanza, <email>annabcostanza@gmail.com</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Marine Megafauna, a section of the journal Frontiers in Marine Science</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>13</day>
<month>12</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>8</volume>
<elocation-id>776965</elocation-id>
<history>
<date date-type="received">
<day>14</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>11</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2021 Costanza, Guidino, Mangel, Alfaro-Shigueto, Verutes, Caillat, Samanta and Hines.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Costanza, Guidino, Mangel, Alfaro-Shigueto, Verutes, Caillat, Samanta and Hines</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Uncertainties about the magnitude of bycatch in poorly assessed fisheries impede effective conservation management. In northern Peru, small-scale fisheries (SSF) bycatch negatively impacts marine megafauna populations and the livelihoods of fishers which is further elevated by the under-reporting of incidents. Within the last decade, accounts of entangled humpback whales (HBW) (<italic>Megaptera novaeangliae</italic>) off the northern coast of Peru have increased, while Eastern Pacific leatherback turtles (LBT) (<italic>Dermochelys coriacea</italic>) have seen over a 90% decline in nesting populations related in large part to bycatch mortality. By leveraging the experience and knowledge of local fishers, our research objectives were to use a low-cost public participation mapping approach to provide a spatio-temporal assessment of bycatch risk for HBW and LBT off two Peruvian fishing ports. We used an open-source, geographic information systems (GIS) model, the Bycatch Risk Assessment (ByRA), as our platform. Broadly, ByRA identifies high bycatch risk areas by estimating the intersection of fishing areas (i.e., stressors) with species habitat and evaluating the exposure and consequence of possible interaction between the two. ByRA outputs provided risk maps and gear risk percentages categorized as high, medium, and low for the study area and seven subzones for HBW in the austral winter and LBT in the austral summer. Overall, the highest bycatch risk for both species was identified within gillnet fisheries near the coast. Bycatch risk for most gear types decreased with distance from the coast. When we separated the ByRA model by port, our map outputs indicate that bycatch management should be port specific, following seasonal and spatial variations for HBW, and specific fishing gear impacts for HBW and LBT. Combined with direct bycatch mitigation techniques, ByRA can be a supportive and informative tool for addressing specific bycatch threats and marine megafauna conservation goals. ByRA supports a participatory framework offering rapid visual information via risk maps and replicable methods for areas with limited resources and data on fisheries and species habitat.</p>
</abstract>
<kwd-group>
<kwd>bycatch</kwd>
<kwd>small-scale fisheries</kwd>
<kwd>participatory GIS (PGIS)</kwd>
<kwd>bycatch risk assessment</kwd>
<kwd>ByRA</kwd>
<kwd>marine megafauna bycatch</kwd>
<kwd>risk modeling</kwd>
</kwd-group>
<contract-sponsor id="cn001">Rufford Foundation<named-content content-type="fundref-id">10.13039/100007463</named-content></contract-sponsor>
<counts>
<fig-count count="10"/>
<table-count count="6"/>
<equation-count count="0"/>
<ref-count count="122"/>
<page-count count="23"/>
<word-count count="16375"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1" sec-type="intro">
<title>Introduction</title>
<p>Fisheries bycatch, defined here as interactions of accidental capture, entanglement, injury, and mortality of non-target species, has been largely accepted as one of the primary threats and drivers of marine megafauna decline (sharks, marine mammals, seabirds, and sea turtles), pushing various species toward extinction (<xref ref-type="bibr" rid="B50">Hall and Roman, 2013</xref>; <xref ref-type="bibr" rid="B51">Hamer et al., 2013</xref>; <xref ref-type="bibr" rid="B66">Lewison et al., 2014</xref>; <xref ref-type="bibr" rid="B53">Hashimoto et al., 2015</xref>). Continued losses of individuals from bycatch alter food web dynamics, cause shifts in ecosystem function and services, and can further endanger already depleted or at-risk populations (<xref ref-type="bibr" rid="B120">Worm et al., 2006</xref>; <xref ref-type="bibr" rid="B94">Roman and McCarthy, 2010</xref>; <xref ref-type="bibr" rid="B34">Estes et al., 2011</xref>; <xref ref-type="bibr" rid="B95">Roman et al., 2014</xref>; <xref ref-type="bibr" rid="B73">McCauley et al., 2015</xref>; <xref ref-type="bibr" rid="B62">Kroodsma et al., 2018</xref>).</p>
<p>Megafauna bycatch is a high conservation concern for which there is often inadequate data (<xref ref-type="bibr" rid="B41">Figueiredo et al., 2020</xref>; <xref ref-type="bibr" rid="B71">Mannocci et al., 2020</xref>). Specifically, in data-poor regions, accessing data required for assessments may be difficult due to the natural complexities of fisheries, especially among artisanal or small-scale fisheries (SSF) (<xref ref-type="bibr" rid="B36">FAO, 2020</xref>; <xref ref-type="bibr" rid="B116">Verutes et al., 2020</xref>). SSF&#x2019;s are broadly defined as smaller vessels with lesser tonnage, that largely use manual labor as opposed to mechanical equipment, and fish predominately in neritic waters. As SSF&#x2019;s tend to involve fishers who often use more than one gear type, may move between ports with seasonal changes, and have no monitoring technologies, few data are available that capture the intricate details of their gear use, spatial extent, and experience, especially concerning bycatch (<xref ref-type="bibr" rid="B14">Berkes et al., 2001</xref>; <xref ref-type="bibr" rid="B21">Cashion et al., 2018</xref>; <xref ref-type="bibr" rid="B23">Castillo et al., 2018</xref>). SSF&#x2019;s, as do all fisheries, have varying amounts of bycatch, with many unknowns related to risk factors, spatial extent, and quantity (<xref ref-type="bibr" rid="B6">Alfaro-Shigueto et al., 2010</xref>, <xref ref-type="bibr" rid="B4">2011</xref>; <xref ref-type="bibr" rid="B2">Alava et al., 2017</xref>; <xref ref-type="bibr" rid="B46">Gray and Kennelly, 2018</xref>).</p>
<p>Among less accessible SSF&#x2019;s, conducting surveys and hosting participatory workshops with fishers are methods that have proven promising in incorporating local knowledge in the data sharing process and aid in bycatch estimates and mitigation efforts (<xref ref-type="bibr" rid="B69">Mancini et al., 2012</xref>; <xref ref-type="bibr" rid="B109">Thiault et al., 2017</xref>; <xref ref-type="bibr" rid="B10">Ayala et al., 2019</xref>; <xref ref-type="bibr" rid="B72">Mason et al., 2019</xref>). Direct fisher interviews used for rapid assessments of bycatch have offered a low-cost and approximate measure of incidental capture of marine megafauna allowing for proper risk assessments, including spatial components of information (<xref ref-type="bibr" rid="B74">Moore et al., 2010</xref>; <xref ref-type="bibr" rid="B87">Pilcher et al., 2017</xref>).</p>
<p>To support effective conservation that truly includes communities, thorough analyses are needed of the social, biological, and economic factors involved in conservation efforts such as understanding various threats to species vulnerable to bycatch. This process of combining many factors to assess risk and possible consequences contribute to risk assessments (<xref ref-type="bibr" rid="B56">Holsman et al., 2017</xref>). Risk assessments are a quantification of an uncertainty which examines both a threat&#x2019;s probability of occurrence and the consequence of that threat (<xref ref-type="bibr" rid="B43">Gibbs and Browman, 2015</xref>). In an environmental context, these assessments often narrow in on anthropogenic threats to an environment or species of interest while also emphasizing geographic locations as an important component in quantifying levels of risk (<xref ref-type="bibr" rid="B7">Arkema et al., 2014</xref>; <xref ref-type="bibr" rid="B18">Brown et al., 2015</xref>; <xref ref-type="bibr" rid="B16">Breen et al., 2017</xref>). Within fisheries, for example, risk assessments supported by local knowledge help managers, local community, and stakeholders understand challenges attributed to diverse fishing practices and identify areas of conservation needs that may be overlooked if not well-examined, such as bycatch (<xref ref-type="bibr" rid="B55">Hobday et al., 2011</xref>).</p>
<p>In data-poor regions, stakeholder input and consultation not only fill data gaps but offer opportunities for communities to acquire ownership of resource management and resource-related decision-making (<xref ref-type="bibr" rid="B121">Yang and Pomeroy, 2017</xref>; <xref ref-type="bibr" rid="B122">Zolkafli et al., 2017</xref>; <xref ref-type="bibr" rid="B22">Castellanos-Galindo et al., 2018</xref>). Community ownership over conservation measures can be supported by researchers and local non-profits by collaborating with local fishers and community members to aid in documenting data, facilitating projects, and synthesizing community needs (<xref ref-type="bibr" rid="B76">Moore et al., 2017</xref>; <xref ref-type="bibr" rid="B108">Szostek et al., 2017</xref>; <xref ref-type="bibr" rid="B24">Chung et al., 2019</xref>; <xref ref-type="bibr" rid="B15">Brandt et al., 2020</xref>).</p>
<p>For example, participatory mapping exercises with stakeholders have encouraged the development of more holistic environmental analyses by using maps to initiate conversation and incorporate different perspectives and knowledge (<xref ref-type="bibr" rid="B65">Levine and Feinholz, 2015</xref>; <xref ref-type="bibr" rid="B68">Luizza et al., 2016</xref>; <xref ref-type="bibr" rid="B64">Leis et al., 2019</xref>). Online and digital mapping platforms such as Geographic Information Systems (GIS) offer a powerful tool for spatial analysis and visualizations to support the collection and organization of data from varying sources (<xref ref-type="bibr" rid="B78">Nelson and Burnside, 2019</xref>). GIS has been especially beneficial to the field of conservation when the relationship between people and environment can be explicitly visualized spatially and temporally (<xref ref-type="bibr" rid="B79">Noble et al., 2019</xref>).</p>
<p>This process of collaboration with community members, transferring their experiences and understanding of their environments via mapping exercises is called Participatory GIS (PGIS) (<xref ref-type="bibr" rid="B33">Dunn, 2007</xref>). PGIS is a low-cost method that has been used in many studies to guide ecosystem management (<xref ref-type="bibr" rid="B26">Croll et al., 2005</xref>; <xref ref-type="bibr" rid="B65">Levine and Feinholz, 2015</xref>; <xref ref-type="bibr" rid="B107">Strickland-Munro et al., 2016</xref>), estimate fishing effort (<xref ref-type="bibr" rid="B109">Thiault et al., 2017</xref>), provide location data for rare or endangered species distributions (<xref ref-type="bibr" rid="B88">Rajamani, 2013</xref>; <xref ref-type="bibr" rid="B72">Mason et al., 2019</xref>), assess anthropogenic threats to coastal environments (<xref ref-type="bibr" rid="B76">Moore et al., 2017</xref>; <xref ref-type="bibr" rid="B22">Castellanos-Galindo et al., 2018</xref>), and estimate the distribution and magnitude of bycatch (<xref ref-type="bibr" rid="B74">Moore et al., 2010</xref>; <xref ref-type="bibr" rid="B87">Pilcher et al., 2017</xref>). The various obstacles and challenges associated with identifying the risk of bycatch in SSF can benefit from incorporating different pieces of the puzzle by using PGIS (<xref ref-type="bibr" rid="B67">Lewison et al., 2018</xref>). Problems as complex as bycatch can use risk assessments to examine opportunities for marine megafauna conservation among fisheries by simulating complex processes.</p>
<p>Risk assessments are more likely to reflect on-the-ground conditions if coastal community members are actively involved in the discussion and implementation of the risk assessment process (<xref ref-type="bibr" rid="B20">Campbell and Cornwell, 2008</xref>; <xref ref-type="bibr" rid="B98">Sawchuk et al., 2015</xref>; <xref ref-type="bibr" rid="B117">Visalli et al., 2020</xref>). The Bycatch Risk Assessment (ByRA) (<xref ref-type="fig" rid="F1">Figure 1</xref>), a spatially explicit analysis that can integrate PGIS data collection methods, was first tested in several southeastern Asian fisheries (<xref ref-type="bibr" rid="B54">Hines et al., 2020</xref>; <xref ref-type="bibr" rid="B116">Verutes et al., 2020</xref>). The ByRA model offers a structural framework specifically for assessing bycatch in data-poor fisheries by making use of available information and incorporating expert opinion and local stakeholder input via fisher interviews to guide place-based management recommendations for reducing bycatch. Fisher interviews are inevitably dependent on fisher&#x2019;s experiences and willingness to contribute to the sharing of bycatch data (<xref ref-type="bibr" rid="B8">Arlidge et al., 2020</xref>). However, by including fisher input, final outputs are more likely to be applicable to end-users and can be tailored to fisher&#x2019;s needs (<xref ref-type="bibr" rid="B99">Scholz et al., 2004</xref>; <xref ref-type="bibr" rid="B1">Aburto-Oropeza et al., 2018</xref>). In areas with partial data due to limited personnel, training, and funding to support bycatch mitigation strategies, a participatory risk assessment framework, such as ByRA, may be an effective option to examine bycatch and initiate fisher input (<xref ref-type="bibr" rid="B2">Alava et al., 2017</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Conceptual model of the Bycatch Risk Assessment (ByRA) process used in our case study. ByRA begins with data collection in Step 1 and ends with the Final Synthesis of the risk maps and recommended management strategies. Each step depicts the basic spatial layers necessary for completing the step and how the output of one process flows into the next. Fisher participation was prevalent in Step 1, 4, and 5 for data collection, data review, and output presentation and discussions. See <xref ref-type="bibr" rid="B116">Verutes et al. (2020)</xref> for further description on ByRA model including how ratings scores are assembled, and risk plots are determined.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g001.tif"/>
</fig>
<p>For this case study, we applied the ByRA model with the following specific objectives: (1) use PGIS to identify areas of fishing and high risk for bycatch of two marine megafauna, (2) provide a spatio-temporal assessment of bycatch risk, and (3) identify gaps in current data monitoring. The ByRA model, run through the freely downloadable software, can be broken down into four phases: (1) conduct a species distribution model for each species, (2) identify and prepare models of fisheries stressors, (3) complete interaction ratings from expert opinion (i.e., bycatch exposure and consequence criteria) for each species (<xref ref-type="table" rid="T1">Table 1</xref>), and (4) produce risk maps that interpret findings to non-expert stakeholders.</p>
<table-wrap position="float" id="T1">
<label>TABLE 1</label>
<caption><p>Exposure and Consequence scoring criteria and definitions used to guide final ratings derived from <xref ref-type="bibr" rid="B116">Verutes et al. (2020)</xref>.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Criteria</td>
<td valign="top" align="left">High risk (3)</td>
<td valign="top" align="left">Medium risk (2)</td>
<td valign="top" align="left">Low risk (1)</td>
<td valign="top" align="left">Description</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="justify" colspan="5"><bold>Exposure (likelihood)</bold></td>
</tr>
<tr>
<td valign="top" align="left">Spatial overlap</td>
<td valign="top" align="left">&#x003E;30% of species overlaps with gear</td>
<td valign="top" align="left">10&#x2013;30% of species overlaps with gear</td>
<td valign="top" align="left">&#x003C;10% of species overlaps with gear</td>
<td valign="top" align="left">The overlap by grid cell between the distribution in space of each species and gear is calculated by ByRA.</td>
</tr>
<tr>
<td valign="top" align="left">Intensity of gear use</td>
<td valign="top" align="left">High intensity</td>
<td valign="top" align="left">Medium intensity</td>
<td valign="top" align="left">Low intensity</td>
<td valign="top" align="left">Overlap between gear-type density and species distribution.</td>
</tr>
<tr>
<td valign="top" align="left">Likelihood of interaction between species and gear</td>
<td valign="top" align="left">High likelihood</td>
<td valign="top" align="left">Medium likelihood</td>
<td valign="top" align="left">Low Likelihood</td>
<td valign="top" align="left">The overlap between habitat suitability and intensity of gear use. The resulting encounter rates are ranked low to high (SEC)</td>
</tr>
<tr>
<td valign="top" align="left">Current status of management</td>
<td valign="top" align="left">No strategies identified or implemented</td>
<td valign="top" align="left">Management strategies identified, not implemented</td>
<td valign="top" align="left">Management strategies identified and implemented</td>
<td valign="top" align="left">Management strategies can limit the use of certain gears in certain areas, thereby mitigating negative impacts to species (SEC)</td>
</tr>
<tr>
<td valign="top" align="left">Likelihood of capture by gear</td>
<td valign="top" align="left">High likelihood</td>
<td valign="top" align="left">Medium likelihood</td>
<td valign="top" align="left">Low Likelihood</td>
<td valign="top" align="left">The &#x201C;catchability&#x201D; of species by gear includes behavior of animal during interaction, for example, dugong may roll around nets.</td>
</tr>
<tr>
<td valign="top" align="left">Temporal overlap (year)</td>
<td valign="top" align="left">All year (12 months)</td>
<td valign="top" align="left">Most of year (4&#x2013;11 months)</td>
<td valign="top" align="left">Occasional (&#x003C;4 months)</td>
<td valign="top" align="left">The duration of time that the species and gear overlap in space.</td>
</tr>
<tr>
<td valign="top" align="left">Temporal overlap (daily net soak time)</td>
<td valign="top" align="left">8 or more hours</td>
<td valign="top" align="left">4&#x2013;7 h</td>
<td valign="top" align="left">0&#x2013;4 h</td>
<td valign="top" align="left">The duration of time nets was set reported by the fishermen. Longer duration would mean greater risk.</td>
</tr>
<tr>
<td valign="top" align="justify" colspan="5"><bold>Consequence&#x2013;<italic>sensitivity</italic></bold></td>
</tr>
<tr>
<td valign="top" align="left">Mortality</td>
<td valign="top" align="left">Lethal</td>
<td valign="top" align="left">Sub-lethal</td>
<td valign="top" align="left">Negligible</td>
<td valign="top" align="left">The severity (direct effect) of gear on mortality rate of a species</td>
</tr>
<tr>
<td valign="top" align="left">Life stages affected by gear</td>
<td valign="top" align="left">Adults only</td>
<td valign="top" align="left">Mixed</td>
<td valign="top" align="left">Juvenile</td>
<td valign="top" align="left">If a gear strands a species before they have the opportunity to reproduce, recovery is likely to be inhibited.</td>
</tr>
<tr>
<td valign="top" align="justify" colspan="5"><bold>Consequence&#x2013;<italic>resilience</italic></bold></td>
</tr>
<tr>
<td valign="top" align="left">Age at maturity</td>
<td valign="top" align="left">&#x003E;4 years</td>
<td valign="top" align="left">2&#x2013;4 years</td>
<td valign="top" align="left">&#x003C;2 years</td>
<td valign="top" align="left">Greater age at maturity corresponds to lower productivity.</td>
</tr>
<tr>
<td valign="top" align="left">Reproductive strategy</td>
<td valign="top" align="left">Long calving interval/high parental invest</td>
<td valign="top" align="left">medium calving interval/high parental invest</td>
<td valign="top" align="left">short calving interval/high parental invest</td>
<td valign="top" align="left">The extent to which a species protects and nourishes its offspring.</td>
</tr>
<tr>
<td valign="top" align="left">Population connectivity</td>
<td valign="top" align="left">Negligible exchange between the focal regional population and other populations</td>
<td valign="top" align="left">occasional movement/exchange between the focal regional population and other populations</td>
<td valign="top" align="left">regular movement/exchange between the focal regional population and other populations</td>
<td valign="top" align="left">The realized exchange with other populations based on spatial patchiness of distribution, degree of isolation, and potential dispersal capability; based on monitoring surveys or direct tracking estimates.</td>
</tr>
<tr>
<td valign="top" align="left">Local conservation status of species</td>
<td valign="top" align="left">Endangered</td>
<td valign="top" align="left">Threatened or of concern</td>
<td valign="top" align="left">Low concern</td>
<td valign="top" align="left">The conservation status of species (population level)</td>
</tr>
</tbody>
</table></table-wrap>
<sec id="S1.SS1">
<title>Case Study</title>
<p>Along the northern coast of Peru, two large oceanic current systems converge and mix to create the highly biodiverse Tropical Eastern Pacific Bioregion, hosting over 70% of Peru&#x2019;s marine biodiversity (<xref ref-type="bibr" rid="B104">Spalding et al., 2007</xref>; <xref ref-type="bibr" rid="B57">Hooker, 2016</xref>). This overlap of productive, nutrient-rich waters supports both diverse marine life and fishers who harvest the commercially valuable fish [e.g., tuna (<italic>Thunnus albacares</italic>), smooth hammerhead sharks (<italic>Sphyrna zygaena</italic>), swordfish (<italic>Xiphias gladius</italic>), thresher sharks (<italic>Alopias</italic> spp.), among others]. By 2015, an average of 5,100 SSF vessels were operating in the northern regions of Piura and Tumbes, Peru, providing vital sources of direct consumption of protein at local and national scales, as well as job security, employing over 27,500 fishers (<xref ref-type="bibr" rid="B23">Castillo et al., 2018</xref>). These waters also present a persistent risk of bycatch of non-targeted species (<xref ref-type="bibr" rid="B4">Alfaro-Shigueto et al., 2011</xref>; <xref ref-type="bibr" rid="B42">Garc&#x00ED;a-Godos et al., 2013</xref>). Various species of conservation concern within this area such as small cetaceans, sea turtles, sea birds, sharks, and large cetaceans have been documented as bycatch, which predominantly occurs in gillnets and longline gear in these regions. Gillnets act like underwater spiderwebs able to capture many marine megafaunal species that can become entangled and drown. This outcome is similar to that of baited longlines that attract unwanted catch via the bait hooked on the lines. Some government organizations interact with SSFs including the Direcci&#x00F3;n de Capitan&#x00ED;as y Puertos (DICAPI) who is the regional government authority who patrols the coast, Pesquer&#x00ED;a del Ministerio de la Producci&#x00F3;n (PRODUCE) who monitor fisheries, and the Instituto del Mar del Per&#x00FA; (IMARPE) who is the research arm of PRODUCE. Though there is an active presence of these organizations in the region, there is currently little to no bycatch regulation enforcement, and bycatch incidents go unreported (<xref ref-type="bibr" rid="B115">Van Waerebeek et al., 1997</xref>; <xref ref-type="bibr" rid="B70">Mangel et al., 2010</xref>; <xref ref-type="bibr" rid="B8">Arlidge et al., 2020</xref>).</p>
<p>Two species that highlight this national issue are the Southeast Pacific humpback whale (HBW) (<italic>Megaptera novaeangliae</italic>), and the Eastern Pacific leatherback turtle (LBT) (<italic>Dermochelys coriacea</italic>). These two large, charismatic megafaunas have differing conservation status, yet share similar severe threats, including bycatch (<xref ref-type="bibr" rid="B3">Alfaro-Shigueto et al., 2008</xref>; <xref ref-type="bibr" rid="B39">F&#x00E9;lix et al., 2011</xref>; <xref ref-type="bibr" rid="B42">Garc&#x00ED;a-Godos et al., 2013</xref>; <xref ref-type="bibr" rid="B82">Ortiz-Alvarez et al., 2020</xref>).</p>
<p>The Southeast Pacific HBW population is listed as Least Concern in the IUCN Red List (<xref ref-type="bibr" rid="B25">Cooke, 2018</xref>). <xref ref-type="bibr" rid="B42">Garc&#x00ED;a-Godos et al. (2013)</xref> published the only account of HBW bycatch in northern Peru, documenting a total of ten stranding events between 1995 and 2012 gathered from local news, online evidence, and direct observations. Of these events, nine were entanglements due to drift nets and one from a longline. There have since been continued accounts of entanglements as the humpbacks&#x2019; coastal migratory route and the southern limit of their winter breeding grounds overlap with SSF operations in northern Peru (<xref ref-type="bibr" rid="B89">Rasmussen et al., 2007</xref>; <xref ref-type="bibr" rid="B37">F&#x00E9;lix and Botero-Acosta, 2011</xref>; <xref ref-type="bibr" rid="B48">Guidino et al., 2014</xref>; <xref ref-type="bibr" rid="B83">Pacheco et al., 2021</xref>). This threat heightens from mid-July through October when whale presence peaks in northern Peru (<xref ref-type="bibr" rid="B38">F&#x00E9;lix and Guzm&#x00E1;n, 2014</xref>). Rope entanglements can be debilitating to whales by weakening their ability to swim, forage, and mate, increasing their susceptibility to infection (<xref ref-type="bibr" rid="B39">F&#x00E9;lix et al., 2011</xref>; <xref ref-type="bibr" rid="B75">Moore and van der Hoop, 2012</xref>).</p>
<p>The Eastern Pacific population of LBT is listed as Critically Endangered by the International Union for the Conservation of Nature (IUCN) Red List, highlighting bycatch as a primary threat (<xref ref-type="bibr" rid="B118">Wallace et al., 2013</xref>). In the last three decades, the EP leatherback turtle population has experienced a greater than 90% decline (<xref ref-type="bibr" rid="B105">Spotila et al., 2000</xref>; <xref ref-type="bibr" rid="B103">Shillinger et al., 2008</xref>). Predominantly during the austral summer (November&#x2013;May), adult EP leatherbacks travel from nesting sites in southern Mexico, Costa Rica, and Nicaragua, crossing paths with numerous fisheries, to forage for jellyfish, including to waters off northern Peru (<xref ref-type="bibr" rid="B4">Alfaro-Shigueto et al., 2011</xref>; <xref ref-type="bibr" rid="B58">Hoover et al., 2019</xref>). Juvenile EP leatherbacks may also be present year-round in and around the study area (<xref ref-type="bibr" rid="B58">Hoover et al., 2019</xref>). Leatherback turtle bycatch has been noted from strandings, on-board reporting, and shore-based surveys with fishers (<xref ref-type="bibr" rid="B5">Alfaro-Shigueto et al., 2018</xref>; <xref ref-type="bibr" rid="B8">Arlidge et al., 2020</xref>; <xref ref-type="bibr" rid="B82">Ortiz-Alvarez et al., 2020</xref>).</p>
<p>Bycatch, especially entanglements of large whales, also places burdens on fisher&#x2019;s funds, time and safety. Whale entanglements cause an estimated average loss of &#x0024;300 USD to the fisher per gillnet pane, which can be a high financial loss given that each vessel has ca.30 panes (<xref ref-type="bibr" rid="B6">Alfaro-Shigueto et al., 2010</xref>). Fishers also lose time when fishing, spent on disentangling and discarding unwanted catch, and can risk their lives if they decide to engage in disentangling larger whales. <xref ref-type="bibr" rid="B28">De la Puente et al. (2020)</xref> demonstrates that bycatch of megafauna is a significant economic burden that has become debilitating to fishers over time. Due to Peru&#x2019;s dependence on fisheries and the rapid growth of the SSF industry, bycatch management is essential to support megafauna welfare and ecosystem health, as well as support the ability of fishers to continue their trade (<xref ref-type="bibr" rid="B28">De la Puente et al., 2020</xref>).</p>
<p>A 2017 provision under the United States Marine Mammal Protection Act (MMPA) will play a role in motivating the development of national regulations (<xref ref-type="bibr" rid="B119">Williams et al., 2016</xref>). This provision requires foreign fisheries that export seafood to the U.S. to develop regulatory management that includes estimates of marine mammal abundance, bycatch assessments as well as the implementation of mitigation efforts, and the establishment of programs to monitor and report bycatch (<xref ref-type="bibr" rid="B80">Oceanic National and Administration Atmospheric [NOAA], 2016</xref>). SSF&#x2019;s may struggle to comply with these provisions, though building relationships between managers and other stakeholders is encouraged to guide initial regional programs and data collection (<xref ref-type="bibr" rid="B59">Johnson et al., 2017</xref>). Although not all fishers in the northern Peru region export to U.S. markets, the presence of conservation measures may have a spill-over effect on SSF practices and handling of bycatch (<xref ref-type="bibr" rid="B119">Williams et al., 2016</xref>).</p>
</sec>
</sec>
<sec id="S2">
<title>Methods</title>
<sec id="S2.SS1">
<title>Study Sites</title>
<p>We conducted the ByRA model in two fishing ports in northern Peru: Mancora (4&#x00B0; 06&#x2032; 38&#x2033; S, 81&#x00B0; 04&#x2032; 01&#x2033; W) and Cancas (3&#x00B0; 56&#x2032; 41&#x2033; S, 80&#x00B0; 56&#x2032; 25&#x2033; W) (<xref ref-type="fig" rid="F2">Figure 2</xref>). The adjacent coastal and open-water study area spans over 125 mi (&#x003E;200 km) of coast from Talara to Tumbes, Peru and west across the ocean to the 82&#x00B0; 40&#x2019; W longitudinal coordinate, covering a total area of just over 40,000 km<sup>2</sup> (15,000 mi<sup>2</sup>). These sites were selected because they fall within the core seasonal distribution of SP humpback whales and seasonal foraging range of EP leatherback turtles (<xref ref-type="bibr" rid="B11">Bailey et al., 2012</xref>; <xref ref-type="bibr" rid="B48">Guidino et al., 2014</xref>) and have well-established small-scale net fisheries with known but poorly quantified bycatch interactions (<xref ref-type="bibr" rid="B42">Garc&#x00ED;a-Godos et al., 2013</xref>). This region also has growing tourism industries (including whale-watching), and ProDelphinus, a Peru-based NGO and the local collaborator, has a few established contacts in the region. Additionally, the Tropical Eastern Pacific Bioregion has received national conservation interest for possible implementation of several marine protected areas in part due to a prominent seamount, locally known as Banco de Mancora, situated northwest approximately 60 km off the coast, considered an area of high importance for marine biodiversity (<xref ref-type="fig" rid="F2">Figure 2</xref>; <xref ref-type="bibr" rid="B77">Nakandakari, 2012</xref>; <xref ref-type="bibr" rid="B92">Servicio Nacional de &#x00C1;reas Naturales Protegidas por el Estado, n.d.</xref>). Predominant gear types operating out of these ports are gillnets, longlines, and handlines, with fewer vessels using purse seines (<xref ref-type="bibr" rid="B47">Guevara-Carrasco and Bertrand, 2017</xref>). The most recent national fisheries survey from 2018 reports 5,601 and 21,943 small-scale fishers operating out of Tumbes and Piura regions, respectively, with estimated numbers increasing over the last near decade (<xref ref-type="bibr" rid="B23">Castillo et al., 2018</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Northern Peruvian coastline and the two fishing ports where interviews were conducted- Mancora and Cancas. Map is divided into study area and seven additional subzones. Zone (1) delineates the 5 nm artisanal fisheries boundary, Zone (2) delineates the 12 nm territorial seas boundary, Zone (3) delineates the cut-off for the bathymetric shelf, and Zone (4) contains the waters beyond the shelf. The second group of subzones were the boundaries of three proposed Marine Protected Areas including (A) Banco de Mancora, (B) Arrecifes de Punta Sal, and (C) Cabo Blanco&#x2013;El &#x00D1;uro.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g002.tif"/>
</fig>
</sec>
<sec id="S2.SS2">
<title>Initial Interviews and Workshop</title>
<p>A total of 85 semi-structured, one-on-one, GIS-based interviews were conducted by our team between July and August of 2019 in two ports, Mancora (<italic>n</italic> = 55) and Cancas (<italic>n</italic> = 30) (<xref ref-type="fig" rid="F2">Figure 2</xref>). The questionnaire was based on <xref ref-type="bibr" rid="B87">Pilcher et al. (2017)</xref> and translated into Spanish. The questionnaire contained 72 questions that covered topics of basic demographics, fisheries data, previous animal sightings, vessel-animal interactions, and conservation perceptions (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A</xref>). For the PGIS part of the interview, using paper maps of the study area (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix B</xref>), we requested that respondents draw polygons for fishing areas they used, and HBW and LBT habitat areas, and points for animal sightings and locations where they had entangled or seen entangled HBW or LBT. We first asked the fishers to mark the map where they sighted HBW and LBT from the previous year, previous 5 years, and then any remaining information from the fisher&#x2019;s lifetime. A table was used to record attributes of the point data (e.g., date, number of individuals, animal condition). We shared a base map with several local geographic references to help guide the fishers, including bathymetry contours of 200 m and names of coastal towns (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix B</xref>). We documented and grouped fishing gear into a total of six common gear type categories: (1) gillnet surface, (2) gillnet bottom, (3) longline surface, (4) longline bottom, (5) purse seine, and (6) hook and line.</p>
<p>We used both purposive and snow-ball sampling methods for finding interview participants (<xref ref-type="bibr" rid="B45">Goodman, 1961</xref>; <xref ref-type="bibr" rid="B29">Denzin and Lincoln, 2018</xref>). Key contacts, who were either well-connected fishers, respected port leaders, or local officials, assisted in introducing us to interview participants. With their help, we specifically sought out captains to avoid duplicate information from individuals on the same vessel (83 and 76% of participants were captains from Mancora and Cancas, respectively). Additionally, we believed captains would be more familiar with, and knowledgeable of our study area due to their longer years of fishing experience. We sought to interview one third of vessels at each port with a focus on the gear types that have been documented previously in local bycatch events (longlines and gill nets). We estimated total vessels for both ports by conducting shore counts of vessels docked at the harbors (Mancora = &#x223C;200, Cancas = &#x223C;100). For our research, the sample group attained was meant for a qualitative analysis of the fishers at each port as well as attain key information regarding fishing activity. Two of the interview participants were not active fishers, but rather worked in the local whale-watching and tourism industry and only offered data on animal sightings. Interviews took under an hour to complete, were conducted in Spanish, and then translated into English for analysis. Each interview began with a statement describing the project goals, and our emphasis on using information for research purposes only. We also explained that the data collected would not be shared with other entities and would be used for research purposes only. This research protocol was approved by the San Francisco State University Institutional Review Board for Human-Subject research on June 20, 2019, Protocol number X19-30.</p>
<p>Interviews were divided into species-specific sections. We used a skip pattern where if a participant stated they never saw a humpback whale (Q17) or a leatherback turtle (Q47), we would end that section of the interview and continue to the next section or go to the final question (Q71). All interview responses were recorded using physical copies of the questionnaire where answers were marked, though three interviews were audio recorded with permission from fishers to recall details later for analysis. Additionally, in August 2019, we hosted a mapping workshop with fishers from Mancora. The goal of the meeting was to review the study area maps as a whole and have an open discussion on the solutions and concerns of bycatch.</p>
</sec>
<sec id="S2.SS3">
<title>Analysis of Interviews and Participatory Maps</title>
<p>All interview responses were transcribed into a spreadsheet, then coded to identify emergent themes from the qualitative responses (<xref ref-type="bibr" rid="B96">Saldan&#x00FE;a, 2009</xref>). Participatory maps from interviews were photographed and imported into a GIS where map images were georeferenced and overlaid atop a base map in the GIS. Hand drawn polygons and point features were digitized in order to transfer information as accurately as possible. Associated table data were attributed to each polygon (e.g., gear characteristics, months fished, target species, etc.) and animal sightings point data (e.g., date and time observed, number and condition of individuals, etc.) (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix B</xref>). Fishery polygons were divided among two seasons: austral winter and austral summer, based on fisher input and oceanic conditions (<xref ref-type="bibr" rid="B84">Pennington et al., 2006</xref>; <xref ref-type="bibr" rid="B12">Bakun and Weeks, 2008</xref>). We recognize that seasonal transitions exist between winter and summer, but for simplicity in describing oceanic conditions and the regional peak whale season, we chose to capture two temporal scenarios. Winter season was defined as June through November, and summer season as December through May. Participants who declared they fished all year were attributed to both summer and winter groupings.</p>
<p>After digitizing the participatory paper maps, all category specific polygons were combined into groups. The groups were: (1) fishing areas by port, season, and gear type (example: Mancora, winter, longline surface) and (2) fisher-perceived habitat of humpback whales and leatherback turtles. We used a count of overlapping polygons on the groups to create density maps of all group specific overlapping polygons. These maps roughly identified where the fishers perceived the greatest fishing density area and the spatial extent of the study species&#x2019; habitat within the study area (Appendices C, D). The second group of maps consisted of previous animal sightings as point data. These data were run through a kernel density estimation (KDE) that interpolates a surface by estimating the spatial extent and density of species presence (<xref ref-type="bibr" rid="B60">Kenchington et al., 2014</xref>) (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix E</xref>). Species maps were printed in large poster format for group review, whereas gear maps were printed on standard letter size for individual reviewers.</p>
</sec>
<sec id="S2.SS4">
<title>Map Review Workshops</title>
<p>Researchers returned to northern Peru for mid-project map review workshops on the 22nd and 23rd of January 2020 in Cancas and Mancora, respectively. The goal of the workshops was to present data collection results and receive feedback on combined data input for corrections and clarifications into the ByRA model. Specific feedback focused on winter and summer season divisions, accuracy of gear use locations, and accuracy of species sightings and habitat.</p>
<p>In the workshops we presented maps containing all of the spatial data gathered from initial interviews. Participants were encouraged to invite other fishers to gather as much feedback as possible in the workshop, regardless of whether they had previously participated in the initial interviews conducted months before. For Cancas, both returning (3) and new participants (15) attended the workshop. We asked the fishers whether the maps generally reflected where they see the species. If not, they were asked to mark on the map the correct locations. The maps were marked using a dry-erase marker as appropriate or were noted OK if approved by participants. After this, we distributed individual, gear-specific paper maps to each participant depending on the type of fishing gear they used. Each paper showed a fisheries density map on one side and two questions on the back asking if the map reflects their own and other fisher&#x2019;s fishing areas, with an area to elaborate on their response. Papers were collected and photographed to be transcribed and later incorporated to revise or reaffirm input into the ByRA.</p>
<p>We hosted two smaller map reviews in Mancora. Three fishers and one whale-watching employee attended the map review. Four additional fishers were also identified and participated in a review on a fishing boat. The same questions were asked, and paper maps distributed, reviewed, marked, and re-collected to be photographed and transcribed.</p>
</sec>
<sec id="S2.SS5">
<title>Building Habitat Models</title>
<p>Sightings data gathered from our PGIS exercises were then used as input into presence-only models to determine the distributions of our study animals. We chose a maximum entropy likelihood model, MaxEnt, to model habitat preferences from a combination of environmental variables and known species occurrences (<xref ref-type="bibr" rid="B86">Phillips et al., 2017</xref>). Maxent is one of the most prevalent models of choice among ecologists due to its simple user interface, predictive power, and presence-only inputs. Maxent accepts smaller sample sizes at a minimum of 30 occurrence points to produce outputs with acceptable statistical power (<xref ref-type="bibr" rid="B110">Tobe&#x00F1;a et al., 2016</xref>).</p>
<p>A total of 215 previous animal sighting points were collected for humpback whales, and 79 for leatherback turtles. We removed sighting points that had no specified month or year. Additional sighting points were removed that came from surveys where the interviewer did not feel confident in the fisher&#x2019;s ability to distinguish among the species reported (Question 80, <italic>n</italic> = 5). To remove spatial autocorrelation and reduce sample bias, we used the SDMtoolbox v2.0 to spatially rarefy the presence points with a 5 km buffer for humpbacks and a 2 km buffer for leatherbacks (<xref ref-type="bibr" rid="B61">Kramer-Schadt et al., 2013</xref>; <xref ref-type="bibr" rid="B17">Brown et al., 2017</xref>). These values were chosen based on the size of the study area, the distribution of the animal presence points, and the scale of which the species&#x2019; have occupied space in the area (<xref ref-type="bibr" rid="B48">Guidino et al., 2014</xref>; <xref ref-type="bibr" rid="B58">Hoover et al., 2019</xref>). Due to a recommended minimum number of 30 occurrence points to show any reasonable statistical power within MaxEnt, we were unable to model either humpback habitat for the austral summer (<italic>n</italic> = 27), or leatherback habitat for austral winter (<italic>n</italic> = 17) (<xref ref-type="bibr" rid="B110">Tobe&#x00F1;a et al., 2016</xref>). Total presence points used for humpback whales were reduced to 75 for the austral winter months (i.e., local whale season), and 35 presence points for leatherback turtles for the austral summer.</p>
<p>A total of eight candidate environmental variables were selected based on previous animal habitat suitability studies and features of ecological importance which have influence on physical processes that may signal safe havens for the species or promote prey availability (<xref ref-type="bibr" rid="B40">Fiedler et al., 2018</xref>). The eight included: sea surface temperature (sst), bathymetry (bathy), chlorophyll <italic>a</italic> (chlora), and k490 coefficient (k490), as well as GIS derived variables: Euclidean distance to bathymetric shelf break (distShelf), distance to shore (dist0), and distance to 200 m isobath (dist200) (<xref ref-type="bibr" rid="B32">Dransfield et al., 2014</xref>; <xref ref-type="bibr" rid="B30">Derville et al., 2018</xref>; <xref ref-type="bibr" rid="B58">Hoover et al., 2019</xref>; <xref ref-type="table" rid="T2">Table 2</xref>). All variables were plotted on a 1.67 km<sup>2</sup> grid of cells, the smallest cell size of the covariate data sources. This spatial scale helped capture the high resolution of fisher-drawn polygons to aid in management recommendations and the practical use of map outputs. Monthly averages of covariates were then averaged for each seasonal range, resulting in eight layers for each season with the same spatial extent, cell size, and coordinate system. Values were extracted for each presence sighting point from appropriate months and years, then were modeled against randomized background points as pseudo-absences in the MaxEnt program. Final distribution models were assessed using two metrics: (1) area under the receiver operating characteristic curve (AUC ROC), and (2) a true skills statistic (TSS) test, in addition to visual comparisons between the Maxent output maps if AUC and TSS were comparable between the final models. Model selection and evaluation is described further in <xref ref-type="supplementary-material" rid="DS1">Supplementary Material</xref> under Species Distribution Models.</p>
<table-wrap position="float" id="T2">
<label>TABLE 2</label>
<caption><p>Candidate environmental variables used in model selection process.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Predictor</td>
<td valign="top" align="left">Description</td>
<td valign="top" align="left">Unit</td>
<td valign="top" align="left">Data type</td>
<td valign="top" align="left">Resolution</td>
<td valign="top" align="left">Source</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">sst</td>
<td valign="top" align="left">Sea surface temperature</td>
<td valign="top" align="left">C<sup>o</sup></td>
<td valign="top" align="left">climatology</td>
<td valign="top" align="left">4 km<sup>2</sup></td>
<td valign="top" align="left">National Oceanic and Atmospheric Administration (NOAA) MODIS (<ext-link ext-link-type="uri" xlink:href="https://oceandata.sci.gsfc.nasa.gov/MODIS-Aqua/">https://oceandata.sci.gsfc.nasa.gov/MODIS-Aqua/</ext-link>)</td>
</tr>
<tr>
<td valign="top" align="left">chlora</td>
<td valign="top" align="left">Chlorophyll-<italic>a</italic></td>
<td valign="top" align="left">mgm<sup>&#x2013;3</sup></td>
<td valign="top" align="left">climatology</td>
<td valign="top" align="left">4 km<sup>2</sup></td>
<td valign="top" align="left">National Oceanic and Atmospheric Administration (NOAA) MODIS (<ext-link ext-link-type="uri" xlink:href="https://oceandata.sci.gsfc.nasa.gov/MODIS-Aqua/">https://oceandata.sci.gsfc.nasa.gov/MODIS-Aqua/</ext-link>)</td>
</tr>
<tr>
<td valign="top" align="left">kd490</td>
<td valign="top" align="left">KD 490 diffuse attenuation coefficient</td>
<td valign="top" align="left">m<sup>&#x2013;1</sup></td>
<td valign="top" align="left">climatology</td>
<td valign="top" align="left">4 km<sup>2</sup></td>
<td valign="top" align="left">National Oceanic and Atmospheric Administration (NOAA) MODIS (<ext-link ext-link-type="uri" xlink:href="https://oceandata.sci.gsfc.nasa.gov/MODIS-Aqua/">https://oceandata.sci.gsfc.nasa.gov/MODIS-Aqua/</ext-link>)</td>
</tr>
<tr>
<td valign="top" align="left">bathy</td>
<td valign="top" align="left">Bathymetry</td>
<td valign="top" align="left">M</td>
<td valign="top" align="left">topographic</td>
<td valign="top" align="left">1.67 m<sup>2</sup></td>
<td valign="top" align="left">NASA Earth Observations (NEO), GEBCO (<ext-link ext-link-type="uri" xlink:href="https://neo.sci.gsfc.nasa.gov/view.php?datasetId=GEBCO_BATHY">https://neo.sci.gsfc.nasa.gov/view.php?datasetId=GEBCO_BATHY</ext-link>)</td>
</tr>
<tr>
<td valign="top" align="left">dist0</td>
<td valign="top" align="left">Euclidean distance to shore</td>
<td valign="top" align="left">m</td>
<td valign="top" align="left">Derived topographic</td>
<td valign="top" align="left">1.67 m<sup>2</sup></td>
<td valign="top" align="left">Interpolated in GIS</td>
</tr>
<tr>
<td valign="top" align="left">distShelf</td>
<td valign="top" align="left">Euclidean distance to shelf edge</td>
<td valign="top" align="left">m</td>
<td valign="top" align="left">Derived topographic</td>
<td valign="top" align="left">1.67 m<sup>2</sup></td>
<td valign="top" align="left">Interpolated in GIS</td>
</tr>
<tr>
<td valign="top" align="left">dist200</td>
<td valign="top" align="left">Euclidean distance to 200 m isobath</td>
<td valign="top" align="left">m</td>
<td valign="top" align="left">Derived topographic</td>
<td valign="top" align="left">1.67 m<sup>2</sup></td>
<td valign="top" align="left">Interpolated in GIS</td>
</tr>
<tr>
<td valign="top" align="left">slope</td>
<td valign="top" align="left">Slope derived from bathymetry</td>
<td valign="top" align="left">&#x2013;</td>
<td valign="top" align="left">Derived topographic</td>
<td valign="top" align="left">1.67 m<sup>2</sup></td>
<td valign="top" align="left">Interpolated in GIS</td>
</tr>
</tbody>
</table></table-wrap>
</sec>
<sec id="S2.SS6">
<title>Bycatch Risk Assessment</title>
<sec id="S2.SS6.SSS1">
<title>Assessing Risk to Species</title>
<p>The Bycatch Risk Assessment (ByRA) model was adapted from the Habitat Risk Assessment tool (version 3.8.9) made freely available from the Stanford Natural Capital Project InVEST software suite.<sup><xref ref-type="fn" rid="footnote1">1</xref></sup> The overall function of the ByRA model is to identify and assess bycatch risk, built on the combination of spatially explicit geospatial layers of both species&#x2019; distribution and fishing areas (<xref ref-type="bibr" rid="B54">Hines et al., 2020</xref>; <xref ref-type="bibr" rid="B116">Verutes et al., 2020</xref>). Within the ByRA model, the software requires following a template to add direct numerical input by the user to give objective weights to each category of gear type and their impact on a species (<xref ref-type="table" rid="T1">Table 1</xref>). These weights are incorporated into ByRA where cumulative risk to a species is calculated from an exposure and consequence matrix (<xref ref-type="bibr" rid="B106">Stephenson et al., 2020</xref>). Exposure is the degree a species experiences stress, injury, or mortality due to an anthropogenic source or activity, which, in this case is exposure to fishing gear (<xref ref-type="bibr" rid="B97">Samhouri and Levin, 2012</xref>). For our research, exposure was measured by seven specific risk factors that contribute to fisheries bycatch, of which four relied on spatially explicit criteria (SEC) data. Rather than a numerical input, the input in the table for the SEC required a file path to a preformatted GIS layer depicting the criteria. These four SEC were (1) spatial overlap between the species and stressors, (2) likelihood of animal interaction with gear type based on the output of the species distribution layers and it&#x2019;s overlap with fishing density, (3) temporal overlap of gear soak time, and (4) intensity of fishing area used as a proxy for the number of vessels or gear in the water at a given time.</p>
<p>Consequence is the impact to a species from a possible interaction with fishing gear. Consequence criteria contain two subcategories: sensitivity and resilience (<xref ref-type="bibr" rid="B101">Sharp et al., 2019</xref>). Respectively, these categories provide an opportunity to include information on the vulnerability, population dynamics, and health of a species, as well as the traits of a species or population that would encourage a recovery from a fishing interaction (<xref ref-type="bibr" rid="B55">Hobday et al., 2011</xref>). Criteria for species-specific <italic>sensitivity</italic> to a stressor includes: (1) life stages affected bycatch, and (2) the severity of the possible interaction. Criteria for species-specific <italic>resilience</italic> to a stressor includes: (1) age of maturity, (2) reproductive strategy, (3) population connectivity, and (4) local conservation status (<xref ref-type="supplementary-material" rid="DS2">Supplementary Tables 3</xref>, <xref ref-type="supplementary-material" rid="DS2">4</xref>).</p>
</sec>
<sec id="S2.SS6.SSS2">
<title>Expert Literature Input</title>
<p>Following the criteria definitions and rating scheme provided by ByRA and previously applied by <xref ref-type="bibr" rid="B54">Hines et al. (2020)</xref> and <xref ref-type="bibr" rid="B116">Verutes et al. (2020)</xref>, all collaborators discussed and assigned scores for each category and binned gear type. Final scores were reviewed among the research team on the basis of their expert knowledge, interview responses, field observations, and previous literature. The ratings given ranged between 1 (low risk) to 3 (high risk) or marked as 0 if a matrix score was unavailable or not applicable (<xref ref-type="supplementary-material" rid="DS2">Supplementary Tables 3</xref>&#x2013;<xref ref-type="supplementary-material" rid="DS2">5</xref>).</p>
</sec>
<sec id="S2.SS6.SSS3">
<title>Preparing Bycatch Risk Assessment Data Input</title>
<p>Fishing area polygons were prepared for each geospatial fishing area layer (<xref ref-type="bibr" rid="B116">Verutes et al., 2020</xref>). If the information exists, the ByRA tool allows users to create spatially explicit criteria (SEC) scores that vary throughout the study area and for each species-gear interaction. For our research we incorporated three SEC: temporal overlap of gear soak time, intensity of fishing area, and likelihood of species/gear interaction.</p>
<p>For temporal overlap of gear soak time, 49% (<italic>n</italic> = 39) of the gillnet fishing areas identified from the interviews had distinguishable variation on length of soak time. Longer soak times, alluding to overnight or half day sets, may create higher risk for an animal interaction (<xref ref-type="bibr" rid="B102">Shester and Micheli, 2011</xref>). When we recorded a soak time of 6 h or more for gillnet fishing polygons, a rating score of 3 was assigned to the <italic>rating</italic> field, though those with soak times between 3 and 6 h were scored a 2 and time less than 3 h scored a 1 and unknown a zero.</p>
<p>For the intensity criteria, we generated the GIS layer by creating individual polygons for each intersecting fisher-drawn polygon and recorded as attributes the number of overlapping polygons in each polygon. For example, in areas where there are ten overlapping fishing areas, a newly created polygon delineated from the mutual overlap was given the value 10 in the <italic>rating</italic> field of the gear-specific GIS layer. Values were reclassified into three categories using the classification algorithm Natural Breaks, which divides similar values together and maximizes the differences between the groups, to fit the risk value schema (1&#x2013;3). More popular or dense fishing areas were then captured in the model as a proxy for determining higher density areas of gear use.</p>
<p>For the third SEC for likelihood of species/gear interaction, we overlaid the categorized species distribution and <italic>intensity</italic> SEC layers. The resulting encounter rates were scored in the <italic>rating</italic> field and were classified into three categories similarly as above. These SEC and related ratings helped differentiate specific fishing areas and identify possible higher bycatch risk zones.</p>
<p>Bycatch Risk Assessment was run a total of six times. We ran the model for both species using all fishing areas, then we divided the fishing areas by port and ran the models again. Two groupings of subzones were created to assess risk (<xref ref-type="fig" rid="F2">Figure 2</xref>). These groupings were chosen to give practical applications of risk outputs based on distance to shore and potential regional protected areas. The first grouping of subzones included four zones delineated by the 5 nm artisanal fisheries boundary (1), the 12 nm territorial seas boundary (2), the cut-off for the bathymetric shelf (3) and the waters beyond the shelf (4). The second group of subzones were the boundaries of three proposed Marine Protected Areas including Banco de Mancora (A), Arrecifes de Punta Sal (B), and Cabo Blanco&#x2013;El &#x00D1;uro (C). Risk percentages for each gear type within each subzone were calculated and classified as low, medium, and high risk (<xref ref-type="fig" rid="F3">Figures 3A</xref>, <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F5">5A</xref>, <xref ref-type="fig" rid="F6">6</xref>). These percentages were determined by the combination of the spatial input data (i.e., fishing areas, and SDM layers) combined with the rating scores, associated weights and data quality ratings assigned by our team in the exposure and consequence tables. As part of the ByRA model outputs, exposure and consequence (ExC) scores were also estimated and plotted for each gear and species combination (<xref ref-type="fig" rid="F3">Figures 3B</xref>, <xref ref-type="fig" rid="F5">5B</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p>Final estimated bycatch risk split by ports (Mancora and Cancas) for humpback whales and leatherback turtles during the austral winter (June- November) and austral summer (December-May), respectively. Subzones include (1) Artisanal fishing zone (5 nm), (2) Territorial seas zone (12 nm), (3) Shelf zone, (4) Beyond shelf zone, (A) Banco de Mancora, (B) Arrecifes de Punta Sal, and (C) Cabo Blanco&#x2013;El &#x00D1;uro. Data uncertainty depicted in stoplight and described further in <xref ref-type="table" rid="T3">Table 3</xref>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g003.tif"/>
</fig>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>(A) We calculated humpback whale bycatch risk percentages for each subzone by gear type divided into low, medium, and high risk. (B) Exposure and consequence plots depict gear impact on species based on the spatial exposure or consequence criteria ratings (<xref ref-type="supplementary-material" rid="DS1">Supplementary Material</xref>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g004.tif"/>
</fig>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption><p>Bycatch risk percentages calculated for humpback whales for each gear type. Subzones assessed are composed of proposed marine protected areas: (A) Banco de Mancora, (B) Arrecifes de Punta Sal, and (C) Cabo Blanco&#x2013;El &#x00D1;uro, as part of the Grau Tropical Marine Reserve.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g005.tif"/>
</fig>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption><p><bold>(A)</bold> We calculated bycatch risk percentages for leatherback turtles for each subzone by gear type divided into low, medium, and high risk. <bold>(B)</bold> Exposure and consequence plots depict gear impact on species based on the spatial exposure or consequence criteria ratings (<xref ref-type="supplementary-material" rid="DS1">Supplementary Material</xref>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g006.tif"/>
</fig>
</sec>
<sec id="S2.SS6.SSS4">
<title>Characterizing Data Uncertainties and Importance</title>
<p>To address the various sources of data availability and quality used to support the model, we incorporated uncertainty metrics and importance weights for each data source and category bin in the exposure and consequence table. Transparency in data quality within risk assessments is important for stakeholder awareness so model outputs are perceived appropriately and data gaps can be clearly defined for future research (<xref ref-type="bibr" rid="B52">Harwood, 2000</xref>). A column specifically for scoring data quality was presented to the user of the ByRA model to allocate quality of data source and importance of criteria used to substantiate the risk scores given. Additionally, data input was characterized visually as part of the final risk maps. Data inputs were given a color scoring of green, yellow or red for four categories of our data: (1) animal sightings distribution, (2) habitat suitability, (3) fishing occurrence/gear type densities, and (4) bycatch/stranding data (<xref ref-type="table" rid="T3">Table 3</xref>; <xref ref-type="bibr" rid="B54">Hines et al., 2020</xref>). Among these categories, inputs were tagged green if they contained substantial data, yellow for limited data availability, and red for unknown or incomplete data. Stoplight figures were incorporated in the maps. By incorporating uncertainties regarding inputs, the model outputs offered more realistic perceptions of our findings and provided quick visual cues for communicating data standards with stakeholders.</p>
<table-wrap position="float" id="T3">
<label>TABLE 3</label>
<caption><p>We assigned uncertainty signals using the stoplight approach from <xref ref-type="bibr" rid="B54">Hines et al. (2020)</xref>.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<tbody>
<tr>
<td valign="top" align="left"><inline-graphic xlink:href="fmars-08-776965-t003.jpg"/></td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p><italic>Coloration signals data quality and uncertainty in final outputs.</italic></p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
</sec>
<sec id="S3" sec-type="results">
<title>Results</title>
<sec id="S3.SS1">
<title>Fishing Areas</title>
<p>During the PGIS section of the interviews, 85 interview respondents drew a total of 104 polygons that represented their fishing grounds. This total area spanned 1 degree 30&#x2019;S of latitude (3 degrees 15&#x2019;- 4 degrees 44&#x2019;S) and 2 degrees 10&#x2019;W of longitude (82 degrees 45&#x2019;W&#x2013;80 degrees 35&#x2019;W) covering an overall area of 43,000 km<sup>2</sup> (<xref ref-type="fig" rid="F2">Figure 2</xref>). Fishing grounds for all gear types covered an area of &#x223C;7,000 km<sup>2</sup> for Cancas and &#x223C;37,000 km<sup>2</sup> for Mancora. The greatest overlap of fishing polygons was for the surface gillnets, for a total of 25 overlapping polygons during the austral summer season (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix D</xref>). The distance to the center of the densest fishing area from shore was 32 km from the port of Mancora and 3 km from the port in Cancas. Most participants identified their fishing behavior as year-round (63%), with 15% exclusively fishing during the winter months and 23% during the summer months.</p>
</sec>
<sec id="S3.SS2">
<title>Fisher Demographics</title>
<p>Fisher demographics between Mancora and Cancas varied in several characteristics, although all fishers were men. Our sample group in Mancora on average fished in larger vessels (mean vessel length = 10 meters), employed larger crew sizes (mean = 5 fishers), and were younger (mean age = 43), compared to Cancas (mean vessel length = 6 meters, crew size = 3 fishers, and mean age = 53). The fishers we interviewed ranged from 25 to 72 years of age. The number of years reported as working in the fisheries trade varied from 2 to 58 years (Mancora mean = 21 years, Cancas mean = 34 years). Due to complex fishing schedules and limited access to all fishers, we are aware that representative samples for extrapolation of fisher responses were not attainable. Rather, sample group responses and results portray a qualitative analysis of the fishers at each port.</p>
<sec id="S3.SS2.SSS1">
<title>Conservation Perceptions</title>
<p>We asked several questions regarding conservation perceptions during the one-on-one interviews to gauge fishers&#x2019; understanding of the population growth or declines over time and attitudes toward HBW and LBT populations (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A</xref>). For fisher&#x2019;s who had been fishing for more than 35 years, 85% (<italic>n</italic> = 20) of respondents stated that there were either more or the same number of humpback whales in the area. This was the same percentage for those who had been fishing for &#x003C;15 years (<italic>n</italic> = 20), and 91.5% for folks who had been fishing between 15 and 35 years (<italic>n</italic> = 40). Comments included legal protections, prohibitions on hunting, and access to anchovies as prey. Two-thirds of the respondents (<italic>n</italic> = 58) stated there will always be humpback whales off the coast of Peru. Of these, 18.4% (<italic>n</italic> = 16) of respondents believed this was due to fishers not hunting humpbacks, 16% (<italic>n</italic> = 14) of respondents cited humpback migrations, 7% (<italic>n</italic> = 6) mentioned that they reproduce, and only 5% (<italic>n</italic> = 4) of respondents gave a scenario stating humpback whale populations would only be sustainable if they were protected. Sixty percent (<italic>n</italic> = 57) of respondents agreed that humpback whales were important to very important for the ocean. However, 18.6% (<italic>n</italic> = 16) stated humpbacks were not important to the ocean, because whales damage their fishing gear or have no function in the ocean. Those that did believe humpbacks were important, mentioned that the ocean is the species&#x2019; natural habitat, and that the whales support local tourism (<xref ref-type="table" rid="T4">Table 4</xref>).</p>
<table-wrap position="float" id="T4">
<label>TABLE 4</label>
<caption><p>Summary of responses to questions 40 and 68 on the perceived importance of species.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Question <italic>Do you think having (species) in the ocean is (or I don&#x2019;t know)</italic></td>
<td valign="top" align="center" colspan="2">Sample responses of explanations<hr/></td>
</tr>
<tr>
<td valign="top" align="justify"/>
<td valign="top" align="left">Humpback whale</td>
<td valign="top" align="left">Leatherback turtle</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">1. Not important</td>
<td valign="top" align="left">Lost and damaged gear; inconvenience; whales have no function</td>
<td valign="top" align="left">They aren&#x2019;t usable</td>
</tr>
<tr>
<td valign="top" align="left">2. Slightly important</td>
<td valign="top" align="left">Not good for fishing; tourism; harms fishermen and their boats; possibility for entanglements</td>
<td valign="top" align="left"><italic>The ocean is their habitat</italic></td>
</tr>
<tr>
<td valign="top" align="left">3. Important</td>
<td valign="top" align="left">The ocean in their home; tourism; part of the ecosystem</td>
<td valign="top" align="left">They are beautiful; the ocean is their habitat/home; they clean the ocean; they maintain biodiversity; tourism</td>
</tr>
<tr>
<td valign="top" align="left">4. Fairly important</td>
<td valign="top" align="left">The ocean is their habitat; they are innocent</td>
<td valign="top" align="left">People eat them; they are part of the ecosystem; they clean the ocean; they signal where there are fish</td>
</tr>
<tr>
<td valign="top" align="left">5. Very important</td>
<td valign="top" align="left">They are part of the food chain; Feces is food for the fish; they scare the sea lions; tourism</td>
<td valign="top" align="left">They are part of the ecosystem; part of the food chain; they eat the bad fish/waste; tourism</td>
</tr>
</tbody>
</table></table-wrap>
<p>As for the 67 respondents who stated they had seen a leatherback turtle in their life, those who had been fishing for more than 35 years, 50% (<italic>n</italic> = 6) believed leatherback turtle numbers have decreased or remained about the same with four individuals unsure. Overall, respondents were split between whether they believed leatherback turtle populations were increasing (<italic>n</italic> = 6), decreasing (<italic>n</italic> = 12), or were unsure (<italic>n</italic> = 11). Seventy-six percent (<italic>n</italic> = 51) of respondents believed that having leatherback turtles in the ocean is important (Q 68) (<xref ref-type="supplementary-material" rid="DS1">Supplementary Appendix A</xref>). When asked why, the fishermen mentioned the species&#x2019; role in the ecosystem and food chain, tourism, and their beauty (<xref ref-type="table" rid="T4">Table 4</xref>). For both Cancas and Mancora, 36.8% of respondents (<italic>n</italic> = 32) stated there would always be leatherback turtles in the ocean, because of legal protections, no hunting, and prey availability. Only two fishers believed there would be a time when there would be no leatherbacks in the ocean, stating that they were being found further offshore, and are nearing extinction.</p>
</sec>
</sec>
<sec id="S3.SS3">
<title>Synthesizing Fisher Knowledge and Perspectives</title>
<p>Fisher participation throughout different points of the research were key in providing a two-way conversation with the participants, allowing us to prepare the input data and present the outputs of the risk assessment more accurately. Both interviews and mapping workshops offered an opportunity for fishers to express their concerns and experiences with bycatch in a one-on-one and group setting. For example, at the first workshop, our research team presented on HBW and LBT population statuses, migrations, and the benefits of the species to the ecosystem. In response, fishers attending the meeting were able to share their knowledge on the species presence in the area via group mapping, their concerns about gear loss from entanglements, and talked about possible solutions to bycatch such as avoiding high density areas of HBW during the season, switching gear types or using bycatch reduction technologies such as acoustic pingers. For our second trip to the ports, fishers helped review the maps of fishing area and habitat layers. Fishers emphasized data that reflected the use of the area and of their peers, and in contrast were able to reject data that did not align with their experience and knowledge of the area. In our final meeting, after a year we initiated the project, we realized that the majority of the fishers had already decided to change gear from surface gillnets to longline, and bottom set nets.</p>
<p>With these group meetings fishers provided valuable feedback, so the input data into ByRA reflected closer the reality of their experiences. Additionally, hearing the fishers&#x2019; perspectives on the severity and high cost of losing their gear (estimated at &#x0024;300 per pane of net) helped us synthesize the ByRA outputs and management recommendations knowing what changes they would be willing to make to reduce unwanted interactions (<xref ref-type="bibr" rid="B6">Alfaro-Shigueto et al., 2010</xref>). Because of these meetings, fishers expressed that they felt valued and that their opinions on management issues mattered. Fishers agreed that more formal conversations between the fishing associations, port administration and each other within a participatory framework could galvanize interest and initiate collaborative ideas in how to mitigate bycatch.</p>
</sec>
<sec id="S3.SS4">
<title>Species Distribution Model</title>
<p>Final contributing environmental covariates from greatest to least contributing were Euclidean distance to shore (dist0) (<italic>PI</italic> = 72.7%), chlorophyll-<italic>a</italic> (chlora) (<italic>PI</italic> = 16.3%), and slope (<italic>PI</italic> = 11%) (<xref ref-type="table" rid="T5">Table 5</xref>). Predicted habitat was close to the coast within 50 km and above the shelf break (<xref ref-type="fig" rid="F2">Figure 2</xref>). The final SDM results for the two species differed in parameter settings and most environmental variables. In the austral winter SDM for humpback whales, the final Maxent model used features Linear, Quadratic and Hinge (LQH), with a 1.5 regularization parameter, and showed predictive performance with an AUC of 0.88 and a TSS of 0.89 (<xref ref-type="table" rid="T6">Table 6</xref>).</p>
<table-wrap position="float" id="T5">
<label>TABLE 5</label>
<caption><p>Selected environmental variables after pruning the covariates (<xref ref-type="supplementary-material" rid="DS1">Supplementary Material</xref>) as well as permutation importance used for final species distribution models.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Species</td>
<td valign="top" align="center">Presence (n)</td>
<td valign="top" align="center">Season</td>
<td valign="top" align="center">chlora<xref ref-type="table-fn" rid="t5fna"><sup>a</sup></xref></td>
<td valign="top" align="center">dist0<xref ref-type="table-fn" rid="t5fnb"><sup>b</sup></xref></td>
<td valign="top" align="center">distShelf<xref ref-type="table-fn" rid="t5fnc"><sup>c</sup></xref></td>
<td valign="top" align="center">dist200<xref ref-type="table-fn" rid="t5fnd"><sup>d</sup></xref></td>
<td valign="top" align="center">Slope<xref ref-type="table-fn" rid="t5fne"><sup>e</sup></xref></td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Humpback whale</td>
<td valign="top" align="center">75</td>
<td valign="top" align="center">Winter<xref ref-type="table-fn" rid="t5fns1">&#x002A;</xref></td>
<td valign="top" align="center">16.3</td>
<td valign="top" align="center">72.7</td>
<td valign="top" align="center">&#x2013;</td>
<td valign="top" align="center">&#x2013;</td>
<td valign="top" align="center">11</td>
</tr>
<tr>
<td valign="top" align="left">Leatherback turtle</td>
<td valign="top" align="center">35</td>
<td valign="top" align="center">Summer<xref ref-type="table-fn" rid="t5fns1">&#x002A;</xref></td>
<td valign="top" align="center">21.8</td>
<td valign="top" align="center">&#x2013;</td>
<td valign="top" align="center">5.5</td>
<td valign="top" align="center">72.7</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p><italic>(&#x2212;) indicates variable was not used in final model.</italic></p></fn>
<fn id="t5fns1"><p><italic>&#x002A;Winter season (June&#x2013;November), summer season (December&#x2013;May).</italic></p></fn>
<fn id="t5fna"><p><italic><sup>a</sup>Chlorophyll-a.</italic></p></fn>
<fn id="t5fnb"><p><italic><sup>b</sup>Euclidean distance to shore.</italic></p></fn>
<fn id="t5fnc"><p><italic><sup>c</sup>Euclidean distance to shelf edge.</italic></p></fn>
<fn id="t5fnd"><p><italic><sup>d</sup>Euclidean distance to 200 m isobath.</italic></p></fn>
<fn id="t5fne"><p><italic><sup>e</sup>Slope derived from bathymetry.</italic></p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="T6">
<label>TABLE 6</label>
<caption><p>Model parameters and performance statistics of final models calculated from biomod2 package for R.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Species</td>
<td valign="top" align="center">Presence (n)</td>
<td valign="top" align="center">Season</td>
<td valign="top" align="center">Training AUC</td>
<td valign="top" align="center">Test AUC mean (standard deviation)</td>
<td valign="top" align="center">TSS (mean)</td>
<td valign="top" align="center">Regularization parameter</td>
<td valign="top" align="center">Features</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Humpback whale</td>
<td valign="top" align="center">75</td>
<td valign="top" align="center">Winter<xref ref-type="table-fn" rid="t6fns1">&#x002A;</xref></td>
<td valign="top" align="center">0.88</td>
<td valign="top" align="center">0.87 (0.06)</td>
<td valign="top" align="center">0.89</td>
<td valign="top" align="center">1.5</td>
<td valign="top" align="center">LQH</td>
</tr>
<tr>
<td valign="top" align="left">Leatherback turtle</td>
<td valign="top" align="center">35</td>
<td valign="top" align="center">Summer<xref ref-type="table-fn" rid="t6fns1">&#x002A;</xref></td>
<td valign="top" align="center">0.86</td>
<td valign="top" align="center">0.87 (0.05)</td>
<td valign="top" align="center">0.85</td>
<td valign="top" align="center">2.5</td>
<td valign="top" align="center">H</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="t6fns1"><p><italic>&#x002A;Winter season (June&#x2013;November), summer season (December&#x2013;May).</italic></p></fn>
</table-wrap-foot>
</table-wrap>
<p>The greatest variable contributor for the leatherback SDM was distance to 200 m depth (dist200) (<italic>PI</italic> = 72.7%), following chlorophyll-<italic>a</italic> (chloral) (<italic>PI</italic> = 21.8%) and Euclidean distance to shelf (dist0) (<italic>PI</italic> = 5.5%) (<xref ref-type="table" rid="T5">Table 5</xref>). For leatherback turtles, the best SDM for the summer season used only the Hinge feature within Maxent, with a 2.5 regularization parameter and scoring similar performance metrics with an AUC of 0.86 and a TSS score of 0.85 (<xref ref-type="table" rid="T6">Table 6</xref>). Leatherback turtle habitat preference showed highest within a 200 m depth, which includes the elevated seamount area known as Banco de Mancora. Both SDMs showed possible evidence of sampling bias with the highest predicted habitat preference nearest to the study sites (<xref ref-type="fig" rid="F7">Figure 7</xref>).</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption><p>Final Maxent model outputs for humpback whales and leatherback turtles were built based on interview responses from PGIS mapping. The top row are the habitat suitability predictions as continuous data with values ranging between 0 and 1. The second row of maps are discretized into three classification levels using the Relative Occurrence Rate (ROR). The low category ranges from 0 to 10% of the maximum ROR. The medium category ranges from 10% of the maximum ROR to 50% of the maximum ROR, and the high category ranges from 50% of the maximum ROR to the maximum ROR.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g007.tif"/>
</fig>
</sec>
<sec id="S3.SS5">
<title>Uncertainty Scores</title>
<p>We determined separate uncertainty scores for each category and species based on standards from <xref ref-type="bibr" rid="B54">Hines et al. (2020)</xref>. Red represents high uncertainty, yellow for medium and green for low. All species sightings data was retrieved from interviews (as opposed to formal transect surveys) which we labeled a blend of yellow and red for HBW and LBT. From these sightings, we were able to construct habitat suitability models using a collection of environmental variables to predict high, medium, and low habitat preferences. Because of the fewer sightings gathered for LBT, we labeled the output risk maps with a stronger uncertainty (labeled yellow and red). Fishing areas were also gathered from our PGIS exercise, which incorporated temporal and spatial variations in gear use. From these we were able to estimate fishing area densities and therefore labeled this criterion as a blend of green and yellow. Although we gathered information on previous bycatch incidents from the fisher interviews, we were not able to give estimates on bycatch rate for either species or ports. Due to this, our data quality on bycatch was labeled a blend of green and yellow for HBW. For LBT, interviewed reported bycatch was gathered from fewer fishers which we labeled a blend of yellow and red to signal greater uncertainty. All uncertainty criteria were considered for stoplight labels shown in the final bycatch risk maps (<xref ref-type="fig" rid="F3">Figures 3</xref>, <xref ref-type="fig" rid="F8">8</xref>, <xref ref-type="fig" rid="F9">9</xref>). For the HBW bycatch maps, we labeled the overall data uncertainty a green and yellow label. For LBT, our overall uncertainty score was yellow and red.</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption><p>Final estimated bycatch risk within the study area and subzones for humpback whales during the austral winter (June-November). This model output included fishing polygons from both ports. Subzones are represented by black dotted and solid lines. (1) Artisanal fishing zone (5 nm), (2) Territorial seas zone (12 nm), (3) Shelf zone, (4) Beyond shelf zone, (A) Banco de Mancora, (B) Arrecifes de Punta Sal, and (C) Cabo Blanco&#x2013;El &#x00D1;uro. Data uncertainty depicted in stoplight and described further in <xref ref-type="table" rid="T3">Table 3</xref>.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-776965-g008.tif"/>
</fig>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption><p>Final estimated bycatch risk within the study area and subzones for leatherback turtles during the austral summer (December-May) with all fishing polygons. (1) Artisanal fishing zone (5 nm), (2) Territorial seas zone (12 nm), (3) Shelf zone, (4) Beyond shelf zone, (A) Banco de Mancora, (B) Arrecifes de Punta Sal, and (C) Cabo Blanco&#x2013;El &#x00D1;uro. Data uncertainty depicted in stoplight and described further in <xref ref-type="table" rid="T3">Table 3</xref>.</p></caption>
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</fig>
</sec>
<sec id="S3.SS6">
<title>Bycatch Risk Estimates</title>
<p>The ByRA outputs are risk plots and a series of GIS map layers classified by the modeled amount of bycatch risk (<xref ref-type="fig" rid="F3">Figures 3</xref>, <xref ref-type="fig" rid="F8">8</xref>, <xref ref-type="fig" rid="F9">9</xref>). Spatially assessed bycatch risk followed patterns associated with high habitat suitability of the study species and where there was high overlap among the seven fishing gear stressors and the spatially explicit criteria (SEC) (likelihood of interaction with species, intensity, and temporal soak time). The HBW risk map showed that the greatest risk was centralized off the coast of Mancora and Cancas, and medium to lower risk further from shore (<xref ref-type="fig" rid="F8">Figure 8</xref>). The highest bycatch risk areas for LBT were present in zones 1, 2, and 3, predominantly centered off the coast between the towns of Cancas and El Alto (<xref ref-type="fig" rid="F9">Figure 9</xref>).</p>
<p>Model outputs that were split by port showed stark differences in the spatial distribution of risk between Cancas and Mancora (<xref ref-type="fig" rid="F3">Figure 3</xref>). For both species, the Cancas risk maps had a smaller range of risk closer to the shore (<xref ref-type="fig" rid="F3">Figure 3</xref>). The risk outputs for Mancora cover a larger region with highest risk spanning a larger coastal area.</p>
<p>For the exposure and consequence (ExC) scores, points plotted higher along the x-axis (consequence) and y-axis (exposure) posed the greatest risk to the species (<xref ref-type="fig" rid="F4">Figures 4B</xref>, <xref ref-type="fig" rid="F5">5B</xref>). For example, points that had high exposure but lower consequence from a species/gear occurrence were plotted more in the left side of the plot (i.e., handline). Overall, gillnets (surface and bottom) were the riskiest gear type for both species within the ExC plots with similar exposure scores and very small differences in consequence. Bottom longlines were second in overall risk (<xref ref-type="fig" rid="F4">Figures 4B</xref>, <xref ref-type="fig" rid="F5">5B</xref>). Handlines showed the lowest risk in the ExC plots for both species, in all subzones and the overall study area.</p>
<sec id="S3.SS6.SSS1">
<title>Numbered Zones</title>
<p>Following the spatial distribution of fishing grounds reported by fishers, bycatch risk for most gear types decreased with distance from the coast. For the LBT risk map, there were large proportions of higher risk areas within all subzones for each gear category (<xref ref-type="fig" rid="F6">Figure 6A</xref>). For the HBW risk map, out of the four zones, the largest percentage of highest risk was for bottom gillnets in zone A (<xref ref-type="fig" rid="F4">Figure 4A</xref>).</p>
</sec>
<sec id="S3.SS6.SSS2">
<title>Proposed Marine Protected Areas</title>
<p>Within the three proposed MPA boundaries, the highest bycatch risk for both species occurred in zone B, Arrecifes de Punta, with the highest risk being associated to surface set gillnets (HBW 87%, LBT 99%), bottom set gillnets (HBW 99%, LBT 99%) and bottom set longlines (HBW 8%, LBT 99%), and additionally surface set longlines (99%) solely for LBT (<xref ref-type="fig" rid="F5">Figures 5</xref>, <xref ref-type="fig" rid="F10">10</xref>). Closely following was zone C, Cabo Blanco&#x2013;El &#x00D1;uro, with similar risk percentages. Risk assessed in zone A, Banco de Mancora, differed most between the species. Bycatch risk for HBW was greatest for bottom gillnets (24% high risk), though there was 100% medium risk for surface gillnets and purse seine gear types (<xref ref-type="fig" rid="F5">Figure 5</xref>). Compared to the LBT risk map within zone A, highest risk percentages for LBT were present for surface gillnets (100%) and longlines (87%) with a 99% medium risk for purse seines (<xref ref-type="fig" rid="F10">Figure 10</xref>).</p>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption><p>Bycatch risk percentages calculated for leatherback turtles for each gear type. Subzones assessed are composed of proposed marine protected areas: <bold>(A)</bold> Banco de Mancora, <bold>(B)</bold> Arrecifes de Punta Sal, and <bold>(C)</bold> Cabo Blanco&#x2013;El &#x00D1;uro, as part of the Grau Tropical Marine Reserve.</p></caption>
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</fig>
</sec>
</sec>
</sec>
<sec id="S4" sec-type="discussion">
<title>Discussion</title>
<p>By applying the Bycatch Risk Assessment (ByRA) model we were able to map areas of high bycatch risk for two marine megafauna species in two highly active artisanal fishing ports in northern Peru. Our assessment outputs and participatory approach are applicable to both localized bycatch mitigation and broader bycatch reduction efforts in data deficient areas as well as generating initial bycatch estimates by identifying areas of bycatch concern and building connections with fishers.</p>
<p>Bycatch Risk Assessment offered a way to engage fishers and provide a platform for collaboration. The project stimulated discussions in the fishing community and provided repeated opportunities for feedback. This was done by using PGIS and returning to the study sites to talk with fishers about the research. We found it especially valuable to collaborate with local organizations, to build upon established relationships and familiarity with the communities. Local groups help access key points of contacts both with direct fisher communities or with other respected members among fisher organizations, admin of the ports, knowledge holders, and/or experts. Historically, bycatch management and legislation in Peru has come from a top-down approach with a heavier focus on small cetaceans (<xref ref-type="bibr" rid="B115">Van Waerebeek et al., 1997</xref>, <xref ref-type="bibr" rid="B114">2002</xref>). Engaging key stakeholders (i.e., the fishers) can help strengthen local capacity for assessing large cetacean entanglements (<xref ref-type="bibr" rid="B59">Johnson et al., 2017</xref>; <xref ref-type="bibr" rid="B1">Aburto-Oropeza et al., 2018</xref>). Overall, we received positive feedback from the map outputs from fishers, who expressed a specific interest in the temporal overlap of the species distributions and fishing areas. For both seasons, our results showed similar geographic areas of high bycatch risk for HBW and LBT. Similar to other studies, higher risk was concentrated nearer to shore where coastal fisheries overlap with productive habitats. For our study area, highest risk was identified within 20 nm offshore and spanned the coastal distance from Talara to Zorritos (<xref ref-type="fig" rid="F3">Figures 3</xref>, <xref ref-type="fig" rid="F8">8</xref>, <xref ref-type="fig" rid="F9">9</xref>). These areas are reflective of the data we used as input into the model. High bycatch risk follows patterns of high habitat preference, fishing intensity, and likelihood of species/gear interaction.</p>
<p>We identified gillnets as the riskiest gear type for both species. Gillnets (surface or demersal) are lethal to many marine species (<xref ref-type="bibr" rid="B27">D&#x2019;Agrosa et al., 2000</xref>; <xref ref-type="bibr" rid="B70">Mangel et al., 2010</xref>; <xref ref-type="bibr" rid="B4">Alfaro-Shigueto et al., 2011</xref>; <xref ref-type="bibr" rid="B91">Reeves et al., 2013</xref>). They create large obstacles for foraging and migratory species (<xref ref-type="bibr" rid="B18">Brown et al., 2015</xref>). Also, in alignment with other studies, respondents mentioned that entanglements of HBW in gillnets reported in our study did not always result in mortality. Continued entanglement in gear after being released or separated from a vessel can yield sublethal conditions and excessive energy costs, which in some cases eventually leads to death (<xref ref-type="bibr" rid="B112">van der Hoop et al., 2017</xref>). Within the boundaries of the study area specifically, demersal gillnets ranked as the highest risk for HBW, and surface gillnets ranked most risky for LBT. All proposed marine protected areas (Zones A, B, C) contained some level of high risk of bycatch for one or more gear types, specifically gillnets for HBW and longlines and gillnets for LBT.</p>
<p>More refined spatial information was revealed when we analyzed our data by port. Different characteristics between the ports may provide insight into why one port experienced greater risk for entanglements. For Cancas, bycatch risk was centered nearby to the port, and most bycatch risk diminished beyond 5 nm. In Mancora, overall fishing activity covered larger coastal and further offshore areas. Fishers had more days at sea, used thickly threaded gillnets, fished with longer nets, more hooks, and fished for an array of larger target species (sharks, tuna). It was important to separate data to visually map the spatial differences between the ports. The port-specific maps revealed localized differences in fishing areas and, consequently, bycatch risk.</p>
<p>Different characteristics from each ports&#x2019; fisheries may have also impacted fishers&#x2019; perspectives about the longevity, ecological function and importance of humpbacks and leatherbacks to marine biodiversity in Peruvian waters. Responses and comments from the subsample of fishers in Mancora indicated that they considered humpback whales less important than the subsample of fishers from Cancas. This could be because fishers from Mancora experienced more entanglements where the whale was found entangled on site. This could create negative perceptions for the fishers of Mancora, who directly see humpbacks as a nuisance or threat to their fishing and livelihood. This differs from fishers from Cancas who were often left with a large hole in their net and less evidence as to which animal created it. Regardless, most fishers believed that HBW and LBT are important for the ocean. These responses are derived from a subsample and might not be representative of the communities as a whole. Nonetheless, this shows the complexity of positive and negative attitudes between fishers and their relationships with marine megafauna (<xref ref-type="bibr" rid="B100">Seminara et al., 2019</xref>). Any mitigation planning within fishing communities going forward should consider these differences in ports and attitudes that can impact effective management or fishers&#x2019; willingness to participate.</p>
<sec id="S4.SS1">
<title>Limitations and Biases</title>
<p>Our results showed greatest risk nearest to the ports we assessed, which can be attributed to higher densities of fishing activity but also biased reporting and recall error. Naturally, there is sample bias in the sightings data since fishers would see animals where they fish, unless the animal was seen in passing from fishing grounds to the port. Our use of a combination of purposive and snowball sampling methods was drawn from our positionality as researchers, access of field site/fishers and their ability and willingness to engage with the research team, and field-specific recommendations of the partner institute Pro-Delphinus. Therefore, the results of our study are neither representative of other fishers/fishery locations nor are our results generalizable. However, in our study, 70 of the 85 participants had over 15 years of experience in the trade and a thorough understanding of their local marine environment from within a fisheries context. Our goal was to conduct a qualitative exploration into the spatial extent of bycatch with little aim in generalizing results to the broader community. We were able to gather consensus-based insights from our target population in both fisheries data and fisher perspectives specific to our study sites.</p>
<p>Furthermore, there is no full way to assess the accuracy of the animal identification and fishing locations that the fishers marked on the maps. One way we addressed this was by using vetting tools to assure that interview participants were speaking of humpbacks and leatherbacks when asked questions about these species (<xref ref-type="bibr" rid="B87">Pilcher et al., 2017</xref>). Additionally, our methods relied on recall, or the fishers&#x2019; memories, to report on previous animal sightings and interactions. Based on a study by <xref ref-type="bibr" rid="B81">O&#x2019;Donnell et al. (2012)</xref>, fishers&#x2019; recall error was shown to be less when inquiring about rare, positive, or extreme events (<xref ref-type="bibr" rid="B81">O&#x2019;Donnell et al., 2012</xref>). We used methods from <xref ref-type="bibr" rid="B74">Moore et al. (2010)</xref> and <xref ref-type="bibr" rid="B87">Pilcher et al. (2017)</xref> to reduce this error. For example, one way we did this was by inquiring about events in specific moments in time (i.e., within the past year, within the past five years and beyond 5 years).</p>
<p>Another limitation in our data collection was in incorporating fisher-derived opportunistic sightings into the species distribution models. Often, predictive models of species distributions rely on the quality of data used as input in the model (<xref ref-type="bibr" rid="B30">Derville et al., 2018</xref>). Our process for building these models was through participatory GIS (PGIS). For us, PGIS filled in gaps where data were either non-existent or lacking (<xref ref-type="bibr" rid="B109">Thiault et al., 2017</xref>). Several studies have adopted PGIS methods for various marine conservation efforts (for example, <xref ref-type="bibr" rid="B65">Levine and Feinholz, 2015</xref>; <xref ref-type="bibr" rid="B76">Moore et al., 2017</xref>). In addition to species data, tracking vessel coverage, movement, and effort of SSF is difficult, if not impossible to obtain. Our incorporation of PGIS to map not only fisheries but species sightings required additional layers of caution that we incorporated in our methodology to reduce bias and consequent misidentification of habitat (<xref ref-type="bibr" rid="B113">van Strien et al., 2013</xref>; <xref ref-type="bibr" rid="B85">Pennino et al., 2019</xref>).</p>
<p>Lastly, PGIS methods used to collect data on animal sightings and previous bycatch incidents have given us insights into lesser-known habitat use, especially when systematic transect surveys are logistically infeasible, prohibitively expensive or when detection probability is low (<xref ref-type="bibr" rid="B31">Di Febbraro et al., 2018</xref>). The latter could be the case for the EP leatherback turtles, which are rare given their small population size and predominantly use pelagic habitat (<xref ref-type="bibr" rid="B44">Giraud et al., 2016</xref>). Using PGIS for species occurrence is an effective route for creating a baseline understanding of species distribution with data uncertainty (<xref ref-type="bibr" rid="B93">Rocchini et al., 2011</xref>; <xref ref-type="bibr" rid="B49">Guillera-Arroita et al., 2015</xref>).</p>
</sec>
<sec id="S4.SS2">
<title>Bycatch Within a Regional Context</title>
<p>Interviews with fishers suggested higher numbers of HBW entanglements than had been previously documented (<xref ref-type="bibr" rid="B39">F&#x00E9;lix et al., 2011</xref>; <xref ref-type="bibr" rid="B42">Garc&#x00ED;a-Godos et al., 2013</xref>). To date, Peruvian SSF bycatch estimates have relied on various short-term collection methods completed by government or non-profit agencies (<xref ref-type="bibr" rid="B70">Mangel et al., 2010</xref>; <xref ref-type="bibr" rid="B4">Alfaro-Shigueto et al., 2011</xref>; <xref ref-type="bibr" rid="B8">Arlidge et al., 2020</xref>). These include onboard observers, fisher interviews, and early testing of remote electronic monitoring (<xref ref-type="bibr" rid="B13">Bartholomew et al., 2018</xref>; <xref ref-type="bibr" rid="B10">Ayala et al., 2019</xref>; <xref ref-type="bibr" rid="B19">Campbell et al., 2020</xref>). Interviews and mapping workshops helped identify areas of greatest risk and improve quantifications of entanglements. From our research, focused on two ports (of the 100+ landing sites along the Peruvian coast), about half of the fishers (<italic>n</italic> = 41, Mancora = 30, Cancas = 11) self-reported a total range of between 64 and 100 HBW bycatch events in 2018 alone. Of these, 64 were mapped with an estimated location of interaction. Of the 85 fishermen interviewed, 28 individual fishers said they have entangled more than 10 HBW in their lifetime and for LBT, only 4 individual fishers reported accidentally capturing more than 10 in their lifetime. These larger estimates of bycatch far surpass previous counts and provide some evidence for a large number of bycatch events that may be occurring but lack an avenue for continuous reporting.</p>
<p>As our ByRA outputs suggests, there is a wide coastal area identified as medium to high bycatch risk for both species, with a high likelihood that this area will increase in size. According to a recent study on the growth and economic status of the Peruvian SSF fleet, SSF fishing effort is increasing, covering larger fishing areas, while landing less catch (<xref ref-type="bibr" rid="B28">De la Puente et al., 2020</xref>). If this national trend of vessel expansion and fishing effort is reflective in our study area, larger areas of habitat would be expected to be at risk as well. Recent review of the Southeast Pacific HBW population, reveals that as a whole, HBW are arriving a month earlier to the northern tropical waters (<xref ref-type="bibr" rid="B9">Avila et al., 2020</xref>). This would add to a longer temporal overlap with fisheries as HBW&#x2019;s approach their wintering habitat, especially putting adult whales at higher risk (<xref ref-type="bibr" rid="B83">Pacheco et al., 2021</xref>).</p>
<p>Trends in SSF status may also impact LBT&#x2019;s. While the majority of LBT life history is pelagic (<xref ref-type="bibr" rid="B58">Hoover et al., 2019</xref>), based on our findings, these turtles also occur in neritic waters, close enough to shore to overlap with artisanal fisheries. Final SDM outputs for leatherback turtles showed greater preference to coastal regions within the depths of 200 m. Though coastal presence has been less commonly reported, nearshore sightings of LBT&#x2019;s have been documented previously via bycatch monitoring or surveys in coastal SSF in northern Peru, western Mexico, the central Americas and Colombia (<xref ref-type="bibr" rid="B3">Alfaro-Shigueto et al., 2008</xref>; <xref ref-type="bibr" rid="B8">Arlidge et al., 2020</xref>; <xref ref-type="bibr" rid="B82">Ortiz-Alvarez et al., 2020</xref>). Given the critical status of the EP leatherback turtle, even a few fishing-related deaths (like those reported here) could further drive declines in the population (<xref ref-type="bibr" rid="B8">Arlidge et al., 2020</xref>; <xref ref-type="bibr" rid="B63">La&#x00FA;d, 2020</xref>).</p>
</sec>
<sec id="S4.SS3">
<title>Future Directions</title>
<p>There is no one path to bycatch reduction. The ByRA model and risk maps offer a more accurate way of understanding and framing that enable more informed decisions about how to reduce bycatch. Our outputs seek to guide conversations leading to effective marine management planning. However, these outputs can be viewed as flexible with an option to be continuously adjusted and updated. Especially within the exposure and consequence table, as new information arises on the local fisheries and species, revising ByRA inputs would allow for refined and more accurate risk assessment scenarios. For example, from our interviews, we discovered greater variations between gear types that could be included in the model to further parse out consequences of bycatch interaction between more specified gear variations and individual species. Additionally, as <xref ref-type="bibr" rid="B28">De la Puente et al. (2020)</xref> notes, since 2015, gillnet and handline fishers have consistently made below minimum wage, while those using trawl nets, purse seine, longlines and squid gigs have made more. For our research we did not assess bycatch risk for two of these gear types (trawl nets due to their illegal status in the area, and squid jigs). It may be important to include additional gear types that have been identified as fisheries with potentially greater profits that could become more favorable financially to fishers in the near future.</p>
<p>Bycatch Risk Assessment is a robust tool that can facilitate greater empowerment of local fishers and lead to a variety of management and legislative actions. Any form of successful mitigation efforts benefit from fishers&#x2019; interest and participation beginning with the early steps of planning (<xref ref-type="bibr" rid="B20">Campbell and Cornwell, 2008</xref>; <xref ref-type="bibr" rid="B1">Aburto-Oropeza et al., 2018</xref>; <xref ref-type="bibr" rid="B111">Twichell et al., 2018</xref>). To truly involve fishers in bycatch mitigation process, ByRA provides structured opportunities to engage in sharing information with the possibility to be representative, and having fishers influence the outcomes. If management tools such as dynamic and seasonal fishing bans and MPA no-take areas are not immediately possible or desired, various practices such as limited soak times, net patrolling, and safe post-capture handling can be applied to areas of highest identified bycatch. This way, limited resources and personnel can be directed to where they can be most effective and where key stakeholder buy-in is strongest. As previous studies suggest, fisher participation is strongly dependent on the process and facilitation of collaboration among parties (<xref ref-type="bibr" rid="B90">Reed, 2008</xref>). We learned from our conservations with fishers that they had already taken voluntary actions to minimize HBW entanglements during whale season and continued to do so after our project, such as switching gear types, fishing further offshore, or temporarily stopping fishing to avoid HBW&#x2019;s.</p>
<p>Future use of the ByRA model could expand beyond our study area or be applied to other ports along the coast and extend risk analysis to other taxa and species (<xref ref-type="bibr" rid="B54">Hines et al., 2020</xref>). Within our study site are several other marine megafauna species with similar bycatch vulnerability, such as small cetaceans or other species of sea turtles. Future habitat modeling should link climatology data to species presence by incorporating El Nino and El Nina seasonal variations to better reflect oceanographic variations (<xref ref-type="bibr" rid="B35">Estrella Arellano and Swartzman, 2010</xref>). It may also be desirable to incorporate sightings data from local whale-watching companies as input into species models and build upon local knowledge of whale entanglements (<xref ref-type="bibr" rid="B83">Pacheco et al., 2021</xref>).</p>
<p>Bycatch Risk Assessment is a model that is strengthened through careful, representative participation that combined several means of data collection from community members, marine scientists, existing databases, and previous research within the area. ByRA outputs offer spatial, and temporal specific recommendations by gear type, subzone, and species to better engage future management and support marine policy. ByRA can help identify possible other scenarios helpful for fishers and animals, such as switching to other economic activities during the whale entangle season, or temporarily switching to other fishing gears. The tool can help fishers act upon diversification based on real data. Bycatch reduction requires multifaceted approaches, working alongside agencies and across broader regions and countries. Given the pyramidal structure of traditional management measures by developing countries with high numbers of SSF, ByRA could also serve as a method where fishermen have a voice and can be part of local management measures.</p>
</sec>
</sec>
<sec id="S5" sec-type="data-availability">
<title>Data Availability Statement</title>
<p>The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.</p>
</sec>
<sec id="S6">
<title>Ethics Statement</title>
<p>The studies involving human participants were reviewed and approved by the San Francisco State University Institutional Review Board, Protocol number X19-30. Written informed consent for participation was not required for this study in accordance with the national legislation and the institutional requirements.</p>
</sec>
<sec id="S7">
<title>Author Contributions</title>
<p>AC, CG, and JA-S: fieldwork, logistics, and interviews. AC, MC, and GV: data analysis. AC, CG, EH, JM, and JA-S: study design. AC, CG, JM, JA-S, GV, EH, and AS: writing and editing the manuscript. All authors contributed to the manuscript and approved the submitted version.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="pudiscl1" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<sec id="S8" sec-type="funding-information">
<title>Funding</title>
<p>This research was funded by the Rufford Foundation grant 27741-1, the American Cetacean Society, San Francisco Chapter-Jonathon Stern Research grant, the Society for Conservation Biology Marine Section Small Grant Program, and a NSF Research Traineeship Grant (award no. DGE-1633336) through the Estuary and Ocean Science Center, at San Francisco State University.</p>
</sec>
<ack><p>We have the greatest gratitude for all of the fishers who participated in the interviews and workshops in Mancora, Cancas, and Los Organos. We especially want to thank Carlos Belupu, who was crucial during fisher interviews. We thank the ProDelphinus staff who helped with the data collection in the field: Clara Ortiz, Kelly Dias, Adriana Gonzalez, Elizabeth Campbell, and Daniela Thorne.</p>
</ack>
<sec id="S10" sec-type="supplementary-material"><title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2021.776965/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2021.776965/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.PDF" id="DS1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Data_Sheet_2.docx" id="DS2" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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