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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2021.768668</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Brief Research Report</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Effects of Seagrass Wasting Disease on Eelgrass Growth and Belowground Sugar in Natural Meadows</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Graham</surname> <given-names>Olivia J.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1314564/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Aoki</surname> <given-names>Lillian R.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1015910/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Stephens</surname> <given-names>Tiffany</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/349442/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Stokes</surname> <given-names>Joshua</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Dayal</surname> <given-names>Sukanya</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Rappazzo</surname> <given-names>Brendan</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1515086/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Gomes</surname> <given-names>Carla P.</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Harvell</surname> <given-names>C. Drew</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/101319/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Ecology and Evolutionary Biology, College of Agriculture and Life Sciences, Cornell University</institution>, <addr-line>Ithaca, NY</addr-line>, <country>United States</country></aff>
<aff id="aff2"><sup>2</sup><institution>Seagrove Kelp Co.</institution>, <addr-line>Ketchikan, AK</addr-line>, <country>United States</country></aff>
<aff id="aff3"><sup>3</sup><institution>Department of Biology, Southeast Missouri State University</institution>, <addr-line>Cape Girardeau, MO</addr-line>, <country>United States</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Natural Resources, College of Agriculture and Life Sciences, Cornell University</institution>, <addr-line>Ithaca, NY</addr-line>, <country>United States</country></aff>
<aff id="aff5"><sup>5</sup><institution>Department of Computer Science, College of Arts and Sciences, Cornell University</institution>, <addr-line>Ithaca, NY</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Stacey Marie Trevathan-Tackett, Deakin University, Australia</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Janina Brakel, Scottish Association for Marine Science, United Kingdom; Lu&#x00ED;sa Magalh&#x00E3;es, University of Aveiro, Portugal; Forest Schenck, Massachusetts Division of Marine Fisheries, United States</p></fn>
<corresp id="c001">&#x002A;Correspondence: Olivia J. Graham, <email>ojg5@cornell.edu</email></corresp>
<fn fn-type="equal" id="fn002"><p><sup>&#x2020;</sup>These authors have contributed equally to this work and share first authorship</p></fn>
<fn fn-type="other" id="fn004"><p>This article was submitted to Marine Ecosystem Ecology, a section of the journal Frontiers in Marine Science</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>10</day>
<month>11</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>8</volume>
<elocation-id>768668</elocation-id>
<history>
<date date-type="received">
<day>01</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>21</day>
<month>10</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2021 Graham, Aoki, Stephens, Stokes, Dayal, Rappazzo, Gomes and Harvell.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Graham, Aoki, Stephens, Stokes, Dayal, Rappazzo, Gomes and Harvell</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Seagrass meadows provide valuable ecosystem benefits but are at risk from disease. Eelgrass (<italic>Zostera marina</italic>) is a temperate species threatened by seagrass wasting disease (SWD), caused by the protist <italic>Labyrinthula zosterae</italic>. The pathogen is sensitive to warming ocean temperatures, prompting a need for greater understanding of the impacts on host health under climate change. Previous work demonstrates pathogen cultures grow faster under warmer laboratory conditions and documents positive correlations between warmer ocean temperatures and disease levels in nature. However, the consequences of disease outbreaks on eelgrass growth remain poorly understood. Here, we examined the effect of disease on eelgrass productivity in the field. We coupled <italic>in situ</italic> shoot marking with high-resolution imagery of eelgrass blades and used an artificial intelligence application to determine disease prevalence and severity from digital images. Comparisons of eelgrass growth and disease metrics showed that SWD impaired eelgrass growth and accumulation of non-structural carbon in the field. Blades with more severe disease had reduced growth rates, indicating that disease severity can limit plant growth. Disease severity and rhizome sugar content were also inversely related, suggesting that disease reduced belowground carbon accumulation. Finally, repeated measurements of diseased blades indicated that lesions can grow faster than healthy tissue <italic>in situ</italic>. This is the first study to demonstrate the negative impact of wasting disease on eelgrass health in a natural meadow. These results emphasize the importance of considering disease alongside other stressors to better predict the health and functioning of seagrass meadows in the Anthropocene.</p>
</abstract>
<kwd-group>
<kwd><italic>Zostera marina</italic></kwd>
<kwd><italic>Labyrinthula zosterae</italic></kwd>
<kwd>specific productivity</kwd>
<kwd>non-structural carbon</kwd>
<kwd>climate change</kwd>
</kwd-group>
<contract-sponsor id="cn001">National Science Foundation<named-content content-type="fundref-id">10.13039/100000001</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="62"/>
<page-count count="8"/>
<word-count count="7739"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="S1">
<title>Introduction</title>
<p>Rapid environmental changes significantly impact and reshape our oceans. Elevated temperatures can alter marine host-pathogen dynamics by increasing host stress and pathogen virulence, expanding pathogen ranges, and altering host ranges, thus triggering increased occurrence and severity of disease outbreaks (<xref ref-type="bibr" rid="B27">Harvell et al., 2002</xref>; <xref ref-type="bibr" rid="B11">Burge et al., 2014</xref>; <xref ref-type="bibr" rid="B15">Cohen et al., 2018</xref>; <xref ref-type="bibr" rid="B12">Burge and Hershberger, 2020</xref>). Climate-driven disease outbreaks can be especially devastating when they target foundation species&#x2014;like seagrass and corals&#x2014;that structure nearshore communities and play vital roles in ecosystem function (<xref ref-type="bibr" rid="B26">Harvell and Lamb, 2020</xref>). This paper examines the impacts of seagrass wasting disease (SWD) on eelgrass (<italic>Zostera marina</italic>) health and productivity.</p>
<p>Seagrass wasting disease historically shaped eelgrass meadows and continues to persist today. In the 1930s, SWD outbreaks decimated up to 90% of eelgrass meadows throughout the North Atlantic (<xref ref-type="bibr" rid="B50">Renn, 1936</xref>; <xref ref-type="bibr" rid="B56">Short et al., 1987</xref>; <xref ref-type="bibr" rid="B38">Muehlstein, 1989</xref>), reducing waterfowl, shrimp, scallop, and fish populations (<xref ref-type="bibr" rid="B50">Renn, 1936</xref>; <xref ref-type="bibr" rid="B57">Stauffer, 1937</xref>; <xref ref-type="bibr" rid="B36">Moffitt and Cottam, 1941</xref>; <xref ref-type="bibr" rid="B35">Milne and Milne, 1951</xref>) and compromising eelgrass ecosystem services (<xref ref-type="bibr" rid="B43">Orth et al., 2006</xref>). These and subsequent die-offs were traced to <italic>Labyrinthula zosterae</italic> (<xref ref-type="bibr" rid="B40">Muehlstein et al., 1988</xref>), which is now recognized as a virulent pathogen in eelgrass (<xref ref-type="bibr" rid="B22">Groner et al., 2014</xref>, <xref ref-type="bibr" rid="B23">2016</xref>; <xref ref-type="bibr" rid="B33">Martin et al., 2016</xref>) and other seagrasses worldwide (reviewed in <xref ref-type="bibr" rid="B59">Sullivan et al., 2018</xref>). Given that eelgrass creates nursery and feeding grounds (<xref ref-type="bibr" rid="B44">Orth et al., 1984</xref>), filters and oxygenates seawater (<xref ref-type="bibr" rid="B16">Costanza et al., 1997</xref>; <xref ref-type="bibr" rid="B28">Hasegawa et al., 2008</xref>), stabilizes sediments (<xref ref-type="bibr" rid="B21">Fonseca et al., 1983</xref>), efficiently stores carbon (<xref ref-type="bibr" rid="B19">Duarte et al., 2005</xref>; <xref ref-type="bibr" rid="B51">R&#x00F6;hr et al., 2018</xref>), and plays important roles in nutrient cycling in nearshore communities (reviewed in <xref ref-type="bibr" rid="B37">Moore and Short, 2006</xref>), SWD can compromise the health of eelgrass individuals, populations, and entire coastal communities.</p>
<p>Understanding the impact of SWD on eelgrass health and productivity under field conditions is particularly pertinent, given the synergistic relationship between warming temperatures <italic>L. zosterae</italic> (<xref ref-type="bibr" rid="B49">Rasmussen, 1977</xref>; <xref ref-type="bibr" rid="B39">Muehlstein, 1992</xref>; <xref ref-type="bibr" rid="B9">Bull et al., 2012</xref>; <xref ref-type="bibr" rid="B6">Bockelmann et al., 2013</xref>; <xref ref-type="bibr" rid="B17">Dawkins et al., 2018</xref>; <xref ref-type="bibr" rid="B24">Groner et al., in press</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>). Laboratory studies indicate the pathogen grows faster <italic>in vitro</italic> under elevated temperatures (<xref ref-type="bibr" rid="B17">Dawkins et al., 2018</xref>), and warmer temperatures coincided with historic (<xref ref-type="bibr" rid="B49">Rasmussen, 1977</xref>) and more recent disease outbreaks (<xref ref-type="bibr" rid="B9">Bull et al., 2012</xref>; <xref ref-type="bibr" rid="B6">Bockelmann et al., 2013</xref>). More recently, field surveys of natural eelgrass meadows in the San Juan Islands, Washington, United States indicate that elevated levels of SWD and declines in meadow density were significantly correlated with warmer winter (<xref ref-type="bibr" rid="B24">Groner et al., in press</xref>) and summer temperatures (<xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>).</p>
<p>Despite the growing body of literature on <italic>L. zosterae</italic> biology and ecology and continued monitoring of SWD in natural eelgrass meadows (<xref ref-type="bibr" rid="B5">Bockelmann et al., 2012</xref>; <xref ref-type="bibr" rid="B22">Groner et al., 2014</xref>, <xref ref-type="bibr" rid="B23">2016</xref>, <xref ref-type="bibr" rid="B24">in press</xref>; <xref ref-type="bibr" rid="B30">Jakobsson-Thor et al., 2018</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>), little is known about the impacts of SWD on eelgrass under natural conditions. Laboratory studies have shown that <italic>L. zosterae</italic> attacks and consumes plant chloroplasts (<xref ref-type="bibr" rid="B39">Muehlstein, 1992</xref>), reduces photosynthetic capabilities of tissue (<xref ref-type="bibr" rid="B47">Ralph and Short, 2002</xref>), and creates large areas of necrotic tissue (<xref ref-type="bibr" rid="B46">Pokorny, 1967</xref>; <xref ref-type="bibr" rid="B55">Short et al., 1986</xref>). SWD therefore likely compromise eelgrass growth rates and ability to accumulate non-structural carbon in rhizomes, which contain high concentrations of sugar. Normally, this sugar accumulates during the summer growing season and fuels regrowth in spring (<xref ref-type="bibr" rid="B13">Burke et al., 1996</xref>). However, since SWD prevalence peaks during warm summer months (<xref ref-type="bibr" rid="B6">Bockelmann et al., 2013</xref>), disease could reduce these valuable sugar reserves and impair eelgrass growth the subsequent year. Here, we coupled ecological surveys and image analysis using artificial intelligence to determine the effect of SWD on eelgrass growth, health, and rhizome sugar in the field.</p>
<p>Eelgrass meadows are considered bioindicators of health within the Salish Sea, an inland sea spanning the United States-Canada border in the northeastern Pacific Ocean (<xref ref-type="bibr" rid="B18">Dennison et al., 1993</xref>; <xref ref-type="bibr" rid="B34">McManus et al., 2020</xref>), and have experienced high levels of SWD in recent years (<xref ref-type="bibr" rid="B22">Groner et al., 2014</xref>, <xref ref-type="bibr" rid="B23">2016</xref>, <xref ref-type="bibr" rid="B24">in press</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>), making this region an important location for understanding the ecological impacts of SWD. The aim of this study was to examine the effect of SWD on aboveground eelgrass growth and productivity and belowground sugar. We measured blade-level disease status (healthy or diseased), site-level disease prevalence (proportion of shoots with SWD), severity (proportion of tissue damaged by wasting disease lesions), and specific productivity (percentage of new blade area produced per day). Given the significant historical role of <italic>L. zosterae</italic> in the extirpation of many eelgrass meadows globally, we expected SWD to compromise eelgrass growth. Specifically, we expected plants with elevated levels of disease to have reduced blade growth rates and rhizome sugar concentrations compared to eelgrass with lower disease levels.</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec id="S2.SS1">
<title>Field Study 1: Eelgrass Growth</title>
<p>To determine temporal differences and interactions between eelgrass growth, productivity, and SWD, we conducted field trials in June and July 2019 at Fourth of July Beach, San Juan Island, WA (48&#x00B0;28&#x2032;01.4&#x2033; N, 123&#x00B0;00&#x2032;00.4&#x2033; W). We selected this site because its intertidal eelgrass has had consistently high levels of SWD since monitoring began in 2017 (<xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>) and remains exposed for several hours during extreme low tides, providing ample time for fieldwork. Each month, we deployed three, 30-m transects spaced approximately 5 m apart in the shallow, intertidal eelgrass meadow at low tide, using a compass to maintain consistent headings and depth gradients for each. We targeted eelgrass in the interior of the meadow to avoid any potential edge effects, since eelgrass growth can vary with nutrients, hydrodynamics, and sediment dynamics within a meadow (<xref ref-type="bibr" rid="B4">Bell et al., 2007</xref>). Using neon flagging tape, we tagged individual eelgrass shoots at 1-m intervals along each transect (<italic>n</italic> = 90 shoots/month, <xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 1</xref>) to minimize heavily impacting any one area (ex: tagging many shoots in a quadrat), since all shoots were ultimately destructively sampled. We marked each tagged shoot for shoot-specific growth rate measurements using the needle punch method (<xref ref-type="bibr" rid="B53">Short and Duarte, 2001</xref>), a standard approach for measuring direct, short-term growth rates in seagrasses. At 5-m intervals along each transect, we recorded eelgrass shoot densities. We also scanned a subset of tagged shoots from each transect for baseline disease measurements (<italic>n</italic> = 4 in June, <italic>n</italic> = 25 in July) and to track lesion development following 6 days of growth in the field. To do so, we removed epiphytes from the third-rank blade of the shoot and carefully scanned it at high resolution (600 dpi) using a photocopy scanner (Canon CanoScan LiDE 220) whilst the shoot was still rooted in the sediment. We also deployed 2 HOBO Pendant loggers in the eelgrass meadow to capture <italic>in situ</italic> temperatures.</p>
<p>After 6 days, we collected all tagged shoots (<italic>n</italic> = 90 in each month). In lab, we removed epiphytes from all shoots and separated the blades from each shoot by age; each shoot contained 3&#x2013;7 blades. The needle-punch method enabled us to easily separate old growth&#x2014;the blade area above the needle scar&#x2014;from the new growth&#x2014;the blade area below the scar (<xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 1</xref>). We scanned all blades (<italic>n</italic> = 434 in June, <italic>n</italic> = 398 in July) to measure disease and blade areas (<xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 1</xref>). We also measured canopy height, number of blades, and sheath length for each shoot. We calculated blade growth rates (specific productivity) as the percentage of daily new blade area (mm<sup>2</sup>d<sup>&#x2013;1</sup>).</p>
</sec>
<sec id="S2.SS2">
<title>Field Study 2: Non-structural Carbon Analyses</title>
<p>We collected belowground rhizomes to determine the effect of SWD on sugar reserves in July 2019. We targeted three sites in the San Juan Islands&#x2014;Fourth of July Beach, Indian Cove (48&#x00B0;33&#x2032;47.6&#x2033; N, 122&#x00B0;56&#x2032;11.2&#x2033; W), False Bay (48&#x00B0;28&#x2032;57.9&#x2033; N, 123&#x00B0;04&#x2032;25.0&#x2033; W)&#x2014;known for having variable levels of SWD (<xref ref-type="bibr" rid="B23">Groner et al., 2016</xref>, <xref ref-type="bibr" rid="B24">in press</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>). At each site, we deployed three, 30-m transects at the same tidal height in the intertidal, where we measured shoot densities and collected five shoots with intact rhizomes at 0, 15, and 30 m (<italic>n</italic> = 45 shoots/site, <italic>n</italic> = 135 total). We targeted rhizomes at least 15 cm long to ensure sufficient sample biomass for subsequent non-structural carbon analyses. We scanned the third-rank (third youngest, <xref ref-type="bibr" rid="B53">Short and Duarte, 2001</xref>) blade of each shoot for disease analyses. To analyze belowground sugar content (non-structural carbon), we dried rhizomes at 60&#x00B0;C, homogenized with a mortar and pestle, and extracted sugars using the hot ethanol extraction method with 2% phenol and concentrated sulfuric acid. We determined total sugar concentrations based on the absorbance at 490 nm using a glucose-fructose-galactose standard curve according to published protocols (<xref ref-type="bibr" rid="B14">Chow and Landhausser, 2004</xref>).</p>
</sec>
<sec id="S2.SS3">
<title>Disease Analyses</title>
<p>A state-of-the-art computer learning algorithm, the Eelgrass Lesion Image Segmentation Application (EeLISA), identified and measured the total area of wasting disease lesions and the total area of healthy tissue on all scanned eelgrass images. We used these to determine blade-level disease status (healthy or diseased), and to calculate SWD prevalence (proportion of shoots with SWD lesions), and blade- and site-level severity (proportion of blade area covered in SWD lesions). Details on EeLISA development and training are provided elsewhere (<xref ref-type="bibr" rid="B48">Rappazzo et al., 2021</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>). EeLISA was trained on over 789 expert-labeled scanned eelgrass images that distinguished SWD lesions from other forms of damage (<xref ref-type="bibr" rid="B48">Rappazzo et al., 2021</xref>). Other forms of damage, including desiccation stress and herbivore grazing scars, are distinctive and readily distinguished from SWD lesions, which have been well characterized (<xref ref-type="bibr" rid="B55">Short et al., 1986</xref>, <xref ref-type="bibr" rid="B56">1987</xref>; <xref ref-type="bibr" rid="B40">Muehlstein et al., 1988</xref>; <xref ref-type="bibr" rid="B10">Burdick et al., 1993</xref>). Using ImageJ, we measured the areas of new and old growth for each blade by hand (<xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 1</xref>).</p>
<p>We compared lesion growth rates and blade growth rates on individual blades using the 29 blades scanned for disease in the field at the start of the marking period and in the lab at the end of the marking period. Using the output from EeLISA for initial and final lesion area, we determined lesion growth rates (mm<sup>2</sup>d<sup>&#x2013;1</sup>) and compared them to the blade growth rates (mm<sup>2</sup>d<sup>&#x2013;1</sup>) calculated from the old and new blade areas at the end of the marking period.</p>
<p>We validated pathogen presence using qPCR to detect <italic>L. zosterae</italic> DNA in samples of diseased eelgrass tissue. In July 2019, we collected lesion tissue samples from the three field sites and processed the samples using established extraction and qPCR methods (<xref ref-type="bibr" rid="B6">Bockelmann et al., 2013</xref>; <xref ref-type="bibr" rid="B25">Groner et al., 2018</xref>).</p>
</sec>
<sec id="S2.SS4">
<title>Statistical Analyses</title>
<p>We performed all statistical analyses in R (v. 1.4.1106). To compare the growth rates between all blades from the eelgrass growth study, we ran a generalized linear mixed model (GLMM) with a gamma distribution and log link using the &#x201C;glmmTMB&#x201D; package (<xref ref-type="bibr" rid="B8">Brooks et al., 2017</xref>), with specific productivity as the response variable. We included blades of all ages (youngest to oldest) in this model to capture the variation in growth rates with respect to disease. Since we measured multiple blades from the same individual shoot, we included shoot identifier as a random effect; fixed effects were blade rank (i.e., age), disease status (healthy or diseased), blade area, total blades per shoot, shoot density (measured at the transect level), and month. We also included an interaction between disease status and blade rank; we compared the full model to simpler models (excluding the interaction and individual terms) using AIC and removed model terms based on &#x0394;AIC &#x003E; 2. The best-performing model by AIC did not include the interaction term but did include all individual fixed effects. We used a gamma distribution, since there was high variation in growth rates and included a dispersion term, as young blades had a greater spread in growth rates. Blades with growth rates of zero were excluded from these analyses, leaving 530 blades in the model.</p>
<p>To determine the impacts of severity on blade growth, we standardized our measurements by targeting the third-rank (third youngest) blades from each shoot (<italic>n</italic> = 176). These blades provided useful disease estimates because third-rank blades contained both healthy and diseased tissue and grew at a measurable rate, in contrast to the oldest blades which were often deteriorating and the youngest blades which rarely had any visually apparent lesions. Third-rank blades are also recognized as the best indicators of recent environmental conditions (<xref ref-type="bibr" rid="B52">Sand-Jensen, 1975</xref>), including disease (<xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>). We used a quantile regression model using the package &#x201C;quantreg&#x201D; (<xref ref-type="bibr" rid="B31">Koenker, 2021</xref>) to assess the relationship between third-rank blade growth rate and severity. For the third-rank blades (<italic>n</italic> = 29) for which we had initial and final disease and blade area measurements, we used a paired <italic>t</italic>-test to compare the lesion and blade growth rates.</p>
<p>To assess disease impacts on belowground non-structural carbon, we ran a linear model with rhizome sugar content as the response variable and disease severity, blade area, shoot density, site, and an interaction between site and severity as fixed effects; site was treated as a fixed effect due to the low number of sites sampled (<italic>n</italic> = 3). Data met assumptions for normality and homoscedasticity.</p>
</sec>
</sec>
<sec sec-type="results" id="S3">
<title>Results</title>
<sec id="S3.SS1">
<title>Site Characteristics</title>
<p>Temperature loggers deployed at Fourth of July Beach in the intertidal meadow documented daily temperature ranges of 11&#x2013;20&#x00B0;C during the June marking period and 11&#x2013;23&#x00B0;C during the July marking period. Daily mean (12.5&#x00B0;C) and median (11.8&#x00B0;C) temperatures were similar during the two marking periods. Maximum daily temperatures occurred when the meadow was exposed during midday low tides. Across the three meadows, shoot densities were lowest at Fourth of July Beach (60 &#x00B1; 28 shoots m<sup>&#x2013;2</sup>, mean &#x00B1; SD) and were similar at False Bay (106 &#x00B1; 28 shoots m<sup>&#x2013;2</sup>) and Indian Cove (103 &#x00B1; 28 shoots m<sup>&#x2013;2</sup>). Molecular analysis confirmed the presence of <italic>L. zosterae</italic> DNA in diseased eelgrass tissue from all three sites, supporting the presence of <italic>L. zosterae</italic> as an infectious pathogen (<xref ref-type="supplementary-material" rid="DS1">Supplementary Table 1</xref>).</p>
</sec>
<sec id="S3.SS2">
<title>Disease Prevalence and Severity</title>
<p>Wasting disease was prevalent at Fourth of July Beach, in both June and July 2019. In both months, disease prevalence (number of infected shoots/total number of shoots) was approximately 95%. Shoot-level severity (total lesion area of all blades on a shoot/total blade area for the shoot) was also similar between the two months, ranging from 0&#x2013;36% in June and 0&#x2013;39% in July and averaging 9% in June and 10% in July. Overall, these disease metrics indicated a substantial presence of the pathogen and potential for meadow-wide impacts from disease.</p>
</sec>
<sec id="S3.SS3">
<title>Disease and Blade Growth Rates</title>
<p>Blade-level disease status and blade rank (age), standardized blade area, and the total number of blades per shoot were significant predictors of blade growth rates (<xref ref-type="fig" rid="F1">Figure 1</xref> and <xref ref-type="supplementary-material" rid="DS1">Supplementary Table 2</xref>). Diseased and older blades grew significantly slower than healthy and younger blades (glmm, <italic>p</italic> &#x003C; 0.001). A diseased, first-rank (youngest) blade grew at approximately 82% of the rate of a healthy, first-rank blade (<xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 2</xref>). Blade growth rates steadily decreased in both diseased and healthy blades with increasing blade age; second-rank blades grew at 17% the rate of first-rank blades. Total number of leaves per shoot and blade area were also significant in the best performing model; smaller blades and shoots with more leaves had faster relative growth (<xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 2</xref>). Shoot density and month were not significant predictors of growth rates.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Predicted specific productivity for diseased and healthy eelgrass blades of different ages, modeled as a function of blade rank (age) and disease status (note the log scale). Blade rank refers to blade age and position on each shoot (1st rank = youngest, 5th rank = 5th youngest). Outlined circles indicate mean predicted values, solid circles indicate underlying data. Error bars indicate 95% confidence intervals of the prediction.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-768668-g001.tif"/>
</fig>
<p>Disease severity ranged from 0&#x2013;70% for third-rank blades across June and July. Blades with more severe SWD (larger proportion of blade tissue damaged) had reduced growth rates compared to blades with less severe SWD, as predicted. Quantile regression showed that this effect was larger for blades with higher disease levels (<xref ref-type="fig" rid="F2">Figure 2</xref>). In higher quantiles with elevated severity, the slopes of the regression lines were steeper than lower quantiles, indicating larger effects. This was also reflected by severity coefficients, which sharply increased in magnitude at higher quantiles (<xref ref-type="supplementary-material" rid="DS1">Supplementary Figure 3</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Quantile regression model showing decreasing blade growth in response to disease severity for third-rank blades (<italic>n</italic> = 176).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-768668-g002.tif"/>
</fig>
</sec>
<sec id="S3.SS4">
<title>Lesion Growth Rates</title>
<p>Repeated measurements of diseased blades indicated that lesion growth rates can significantly exceed blade growth rates <italic>in situ</italic> for third-rank (third youngest) blades (<xref ref-type="fig" rid="F3">Figure 3</xref>, paired <italic>t</italic>-test, <italic>p</italic> &#x003C; 0.05). Mean lesion growth rates were 51 mm<sup>2</sup>d<sup>&#x2013;1</sup>, with a maximum rate of 371 mm<sup>2</sup>d<sup>&#x2013;1</sup>. In comparison, the mean absolute blade growth rate for this subset of third-rank blades was 16 mm<sup>2</sup>d<sup>&#x2013;1</sup> and the maximum growth rate was 71 mm<sup>2</sup>d<sup>&#x2013;1</sup>.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p><italic>In situ</italic> lesion growth rates outpaced blade growth rates among third-rank blades (<italic>n</italic> = 29). Dashed line indicates the 1:1 line.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-768668-g003.tif"/>
</fig>
</sec>
<sec id="S3.SS5">
<title>Non-structural Carbon Analyses</title>
<p>Across the three meadows, disease severity and rhizome sugar content (mg per g rhizome dry weight) were inversely related (<xref ref-type="fig" rid="F4">Figure 4</xref>). Disease severity ranged from 0&#x2013;10% at Indian Cove and from 0&#x2013;20% at Fourth of July Beach and False Bay. Both disease severity and site were significant predictors for rhizome sugar concentrations, together explaining roughly 50% of variation in sugar content (<xref ref-type="supplementary-material" rid="DS1">Supplementary Table 3</xref>). Shoot density was not a significant predictor of belowground sugar content. Mean (&#x00B1; SD) sugar content was highest at Fourth of July Beach (419 &#x00B1; 56 mg per g rhizome dry weight) and similar at Indian Cove (311 &#x00B1; 53 mg per g) and False Bay (356 &#x00B1; 54 mg per g). Despite the variation between sites, the overall pattern was consistent: at higher disease severities, rhizome sugar concentrations decreased significantly.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Rhizome sugar content declined as a function of disease severity (<italic>n</italic> = 135) at three eelgrass meadows.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fmars-08-768668-g004.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="S4">
<title>Discussion</title>
<p>Globally, seagrasses are declining under pressure from coastal development, climate change, and disease (<xref ref-type="bibr" rid="B43">Orth et al., 2006</xref>; <xref ref-type="bibr" rid="B61">Waycott et al., 2009</xref>; <xref ref-type="bibr" rid="B20">Dunic et al., 2021</xref>). To sustain and conserve these crucial habitats and their ecosystem services, we must determine the impacts of disease on eelgrass health. Though laboratory studies have identified the impact of SWD on eelgrass photosynthesis (<xref ref-type="bibr" rid="B47">Ralph and Short, 2002</xref>) and necrosis (<xref ref-type="bibr" rid="B46">Pokorny, 1967</xref>; <xref ref-type="bibr" rid="B55">Short et al., 1986</xref>; <xref ref-type="bibr" rid="B39">Muehlstein, 1992</xref>) and field surveys continue to highlight outbreak-levels of disease (<xref ref-type="bibr" rid="B22">Groner et al., 2014</xref>, <xref ref-type="bibr" rid="B23">2016</xref>, <xref ref-type="bibr" rid="B24">in press</xref>; <xref ref-type="bibr" rid="B30">Jakobsson-Thor et al., 2018</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>), the direct impact of SWD on eelgrass growth and sugar reserves in natural meadows remains unknown. Here we show that SWD predicts reduced blade growth rates and rhizome sugar concentrations in natural meadows. However, given the observational nature of this field study, reverse causality could account for the reduced blade growth among eelgrass with elevated SWD severity. For example, slower growing eelgrass could be more susceptible to SWD compared to faster-growing eelgrass. The observed reduced blade growth rates also could be due to other confounding factors like blade-level differences in epiphyte loads, which have been associated with higher probabilities of eelgrass having SWD (<xref ref-type="bibr" rid="B23">Groner et al., 2016</xref>). Shading due to epiphytes could then impact both SWD severity and eelgrass growth.</p>
<p>Our observed SWD prevalence and severity levels were higher than historical measurements from nearby sites. Previously, intertidal field surveys from 2012&#x2013;2013 found disease prevalence ranged from 6&#x2013;79% (<xref ref-type="bibr" rid="B22">Groner et al., 2014</xref>, <xref ref-type="bibr" rid="B23">2016</xref>) elsewhere in the San Juan Islands, WA. These disparities may in part be due to different methods for calculating prevalence. <xref ref-type="bibr" rid="B22">Groner et al. (2014)</xref> measured prevalence&#x2014;the proportion of diseased blades relative to total number of blades&#x2014;based on the longest blade on each shoot, while <xref ref-type="bibr" rid="B23">Groner et al. (2016)</xref> used the second-oldest intact blade on each shoot. Our results based on the proportion of diseased shoots relative to the total number of shoots indicated elevated SWD levels, like observed prevalence of 95.8&#x2013;100% in intertidal Swedish eelgrass (<xref ref-type="bibr" rid="B30">Jakobsson-Thor et al., 2018</xref>). While some spatiotemporal variation is expected, the near-100% prevalence we observed at Fourth of July Beach could be in part linked to warmer ocean temperatures in 2019 (<xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>; <xref ref-type="bibr" rid="B1">Amaya et al., 2020</xref>). In comparison to historical sea surface temperature records, summer 2019 temperatures were warmer locally in the San Juan Islands (<xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>) and more broadly for the North Pacific (<xref ref-type="bibr" rid="B1">Amaya et al., 2020</xref>). This is important for eelgrass growth and health, since warm temperatures are associated with reduced production of phenolic compounds (<xref ref-type="bibr" rid="B60">Vergeer et al., 1995</xref>), which are used in microbial defense. Among eelgrass, thermal stress during warmer summer months can also increase respiration compared to photosynthesis, altering photosynthetic and growth rates (<xref ref-type="bibr" rid="B45">Phillips and Menez, 1988</xref>; <xref ref-type="bibr" rid="B32">Lee et al., 2007</xref>). Taxed by thermal stress and compromised growth, eelgrass could be more susceptible to SWD in certain conditions. Indeed, warming temperatures have recently been suggested to contribute to SWD outbreaks (<xref ref-type="bibr" rid="B22">Groner et al., 2014</xref>, <xref ref-type="bibr" rid="B24">in press</xref>; <xref ref-type="bibr" rid="B33">Martin et al., 2016</xref>; <xref ref-type="bibr" rid="B59">Sullivan et al., 2018</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>).</p>
<p>While outbreaks of SWD have been implicated in meadow decline and collapse, understanding how disease impacts at individual blade- and shoot-levels scale across eelgrass populations and ecosystems remains unclear. Our results suggest that consequences of disease may have ecosystem-wide effects under natural conditions. Diseased, first-rank blades grew nearly 25% slower than healthy, first-rank blades. Because blade growth is concentrated in the youngest two blades (<xref ref-type="bibr" rid="B52">Sand-Jensen, 1975</xref>), our findings suggest SWD in natural meadows may limit shoot size at maturity by compromising the growth of the young, fast-growing blades. Disease on mature blades may also reduce total shoot growth. Although third-rank blades have lower specific productivity rates (blade elongation as a percent of existing blade area per day), absolute blade growth rates could exceed 200 mm<sup>2</sup>d<sup>&#x2013;1</sup> for third-rank blades. These growth rates declined significantly with more severe SWD, suggesting that greater disease severity could limit plant growth. Rapidly spreading SWD may further influence total shoot physiology by interrupting transport of oxygen, photosynthesis products, and/or nutrients (<xref ref-type="bibr" rid="B47">Ralph and Short, 2002</xref>). The reduced rhizome sugar concentrations in severely diseased plants indicate SWD likely affected belowground carbon accumulation. Indeed, reduced non-structural carbon reserves were likely related to the observed, compromised blade growth, as diseased eelgrass has reduced photosynthetic capacity and may dedicate more resources to immune response (<xref ref-type="bibr" rid="B60">Vergeer et al., 1995</xref>). Ultimately, the combination of compromised growth and diminished sugar stores may reduce shoot survival, and in meadows such as this study site, where almost every plant had SWD, the impacts could accumulate at the ecosystem scale.</p>
<p>Reduced blade growth and rhizome sugars associated with severe SWD suggest that the disease can limit the persistence of entire eelgrass meadows over time. Some eelgrass meadows experience increased thermal and pathogen stress during warmer summer months (<xref ref-type="bibr" rid="B62">Young, 1943</xref>; <xref ref-type="bibr" rid="B6">Bockelmann et al., 2013</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>). Taken together, this could reduce not only immediate eelgrass growth, which normally peaks in summer (<xref ref-type="bibr" rid="B52">Sand-Jensen, 1975</xref>), but also alter seasonal patterns in eelgrass productivity. Heavily diseased eelgrass with compromised growth and rhizome sugars may be vulnerable to environmental stressors over winter or early spring when eelgrass draws upon critical carbohydrate reserves from the previous summer (<xref ref-type="bibr" rid="B13">Burke et al., 1996</xref>). Less robust plants may be further vulnerable to SWD the following summer, creating a reinforcing feedback loop that could drive meadow-wide declines. Prior studies have noted that while SWD outbreaks can cause large-scale meadow die-offs, other meadows can support widespread disease without collapsing (<xref ref-type="bibr" rid="B56">Short et al., 1987</xref>; <xref ref-type="bibr" rid="B30">Jakobsson-Thor et al., 2018</xref>). The results from this study show how SWD may negatively impact the health of a meadow without immediately causing an ecosystem collapse. A precipitating disturbance or change in environmental conditions may then trigger widespread die-offs of vulnerable eelgrass. The global losses of eelgrass in the 1930s likely resulted from some combination of SWD and environmental stressors (<xref ref-type="bibr" rid="B58">Sullivan et al., 2013</xref>). However, studies testing the combined effects of SWD and stressors such as light availability, salinity, and temperature tend to occur in short-term laboratory mesocosms experiments (e.g., <xref ref-type="bibr" rid="B7">Brakel et al., 2019</xref>; <xref ref-type="bibr" rid="B29">Jakobsson-Thor et al., 2020</xref>). While these allow for carefully controlled testing of multiple stressors, they do not fully capture the long-term effects of SWD and environmental conditions in natural meadows. Additional field-based studies are needed to better understand these dynamic interactions over time.</p>
<p>In addition to making meadows more vulnerable to collapse, SWD may also impair meadow recovery following disturbance. At the meadow scale, reduced growth rates and carbohydrate reserves may limit regrowth of diseased shoots compared to healthy shoots. Rapid regrowth following disturbance is key to maintaining seagrass ecosystem services, such as carbon sequestration and biodiversity (<xref ref-type="bibr" rid="B41">Nowicki et al., 2017</xref>; <xref ref-type="bibr" rid="B2">Aoki et al., 2021</xref>); slower recovery rates may also increase meadow vulnerability to repeated disturbance, such as successive marine heat waves. By both increasing vulnerability and impairing recovery, SWD reduces the ecological resilience of eelgrass meadows and may impede conservation of existing meadows. Given the significant role of eelgrass in structuring coastal ecosystems and driving biogeochemical processes (reviewed in <xref ref-type="bibr" rid="B37">Moore and Short, 2006</xref>), reduced meadow resilience will have negative consequences for habitat provisioning, nutrient cycling, and other ecosystem services. Better understanding of the impact of chronic SWD on meadow trajectories through time is needed to optimize seagrass conservation and restoration efforts.</p>
<p>Further work is needed to understand the complex interactions between climate change, SWD, and eelgrass meadow resilience. The effects of environmental stressors on eelgrass, including changes in sea surface temperatures, salinity, ocean acidification, and altered light availability due to sea level rise, are not well understood (<xref ref-type="bibr" rid="B54">Short et al., 2016</xref>). Recent field surveys indicate positive associations between temperature and SWD (<xref ref-type="bibr" rid="B24">Groner et al., in press</xref>; <xref ref-type="bibr" rid="B3">Aoki et al., in review</xref>), while others suggest the relationship may be more bell-shaped, given the optimal thermal ranges for <italic>L. zosterae</italic> (<xref ref-type="bibr" rid="B62">Young, 1943</xref>; <xref ref-type="bibr" rid="B42">Olsen et al., 2015</xref>). Furthermore, the interactions between SWD and other environmental stressors remains unclear. Some reports indicate future conditions may reduce the effects of disease (<xref ref-type="bibr" rid="B7">Brakel et al., 2019</xref>), while others determined SWD is correlated with salinity (<xref ref-type="bibr" rid="B30">Jakobsson-Thor et al., 2018</xref>) and may be sensitive to pH (<xref ref-type="bibr" rid="B25">Groner et al., 2018</xref>). Certainly, interactions between temperature and other aspects of climate change may influence SWD but necessitate further research to understand these complex relationships and determine drivers of eelgrass resilience.</p>
<p>This study emphasizes the importance of considering disease alongside other climate change stressors to better predict the health and functioning of seagrass meadows in the Anthropocene. To the best of our knowledge, this is the first project to demonstrate that <italic>L. zosterae</italic> can significantly compromise eelgrass growth and belowground, non-structural carbohydrates in natural meadows. This work broadens our understanding of the effects of SWD on eelgrass productivity and is particularly relevant given mounting environmental stressors. Of course, these analyses were limited to eelgrass in one region over one summer growing season. Furthermore, at a site there can be multiple <italic>L. zosterae</italic> strains, which can vary in virulence (<xref ref-type="bibr" rid="B33">Martin et al., 2016</xref>) and produce significant differences in disease severity (<xref ref-type="bibr" rid="B17">Dawkins et al., 2018</xref>). Other groups of seagrass pathogens, including oomycetes and Phytomyxea (reviewed in <xref ref-type="bibr" rid="B59">Sullivan et al., 2018</xref>), should also be considered in the context of eelgrass health and productivity. As such, more studies are needed to examine these plant-pathogen relationships across the range of environmental conditions of existing eelgrass meadows. Eelgrass is a foundation species of critical coastal habitat across the northern hemisphere. Understanding the vulnerability of these meadows to disease is essential to their conservation across the species&#x2019; range and in a changing climate.</p>
</sec>
<sec sec-type="data-availability" id="S5">
<title>Data Availability Statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: The datasets analyzed for this study can be found in the Zenodo repository (<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.5339331">https://doi.org/10.5281/zenodo.5339331</ext-link>).</p>
</sec>
<sec id="S6">
<title>Author Contributions</title>
<p>OG, TS, and CH conceived of this study. OG, LA, and SD developed the methods. OG, LA, TS, and JS collected and processed samples in the laboratory. BR and CG developed EeLISA. BR processed images. LA analyzed the data. OG and LA wrote the manuscript. CG and CH provided resources and supervision. CH helped in the field. All authors contributed to editing this manuscript.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>TS is employed by Seagrove Kelp Co. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="S7">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<sec sec-type="funding-information" id="S8">
<title>Funding</title>
<p>SD and JS received support from the National Science Foundation&#x2019;s Research Experience for Undergraduates (NSF-REU) program. The Friday Harbor Labs Research Fellowship Endowment provided support for OG. LA was supported by NSF award OCE-1829921.</p>
</sec>
<ack>
<p>We would like to thank Jack Novak for help with collecting and processing samples, and to the University of Washington&#x2019;s Friday Harbor Laboratories community, which supports collaborative research like this! We would also like to thank three reviewers for their thoughtful, constructive feedback.</p>
</ack>
<sec id="S9" sec-type="supplementary material">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2021.768668/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2021.768668/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.docx" id="DS1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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