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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2018.00046</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Fishermen Follow Fine-Scale Physical Ocean Features for Finance</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Watson</surname> <given-names>James R.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/329760/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Fuller</surname> <given-names>Emma C.</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Castruccio</surname> <given-names>Frederic S.</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/480600/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Samhouri</surname> <given-names>Jameal F.</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/389216/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>College of Earth, Ocean and Atmospheric Sciences, Oregon State University</institution>, <addr-line>Corvallis, OR</addr-line>, <country>United States</country></aff>
<aff id="aff2"><sup>2</sup><institution>Stockholm Resilience Centre, Stockholm University</institution>, <addr-line>Stockholm</addr-line>, <country>Sweden</country></aff>
<aff id="aff3"><sup>3</sup><institution>Department of Ecology and Evolutionary Biology, Princeton University</institution>, <addr-line>Princeton, NJ</addr-line>, <country>United States</country></aff>
<aff id="aff4"><sup>4</sup><institution>Climate and Global Dynamics Group, National Center for Atmospheric Research</institution>, <addr-line>Boulder, CO</addr-line>, <country>United States</country></aff>
<aff id="aff5"><sup>5</sup><institution>Northwest Fisheries Science Center, National Oceanic and Atmospheric Administration</institution>, <addr-line>Seattle, WA</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: E. Christien Michael Parsons, George Mason University, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Andrew M. Fischer, University of Tasmania, Australia; Edward Jeremy Hind-Ozan, Cardiff University, United Kingdom</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: James R. Watson <email>jrwatson&#x00040;coas.oregonstate.edu</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Marine Conservation and Sustainability, a section of the journal Frontiers in Marine Science</p></fn></author-notes>
<pub-date pub-type="epub">
<day>19</day>
<month>02</month>
<year>2018</year>
</pub-date>
<pub-date pub-type="collection">
<year>2018</year>
</pub-date>
<volume>5</volume>
<elocation-id>46</elocation-id>
<history>
<date date-type="received">
<day>26</day>
<month>10</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>31</day>
<month>01</month>
<year>2018</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2018 Watson, Fuller, Castruccio and Samhouri.</copyright-statement>
<copyright-year>2018</copyright-year>
<copyright-holder>Watson, Fuller, Castruccio and Samhouri</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p>The seascapes on which many millions of people make their living and secure food have complex and dynamic spatial features&#x02014;the figurative hills and valleys&#x02014;that influence where and how people work at sea. Here, we quantify the physical mosaic of the surface ocean by identifying Lagrangian Coherent Structures for a whole seascape&#x02014;the U.S. California Current Large Marine Ecosystem&#x02014;and assess their impact on the spatial distribution of fishing. We observe that there is a mixed response: some fisheries track these physical features, and others avoid them. These spatial behaviors map to economic impacts, in particular we find that tuna fishermen can expect to make three times more revenue per trip if fishing occurs on strong Lagrangian Coherent Structures. However, we find no relationship for salmon and pink shrimp fishing trips. These results highlight a connection between the biophysical state of the oceans, the spatial patterns of human activity, and ultimately the economic welfare of coastal communities.</p></abstract>
<kwd-group>
<kwd>spatial behavior</kwd>
<kwd>seascape</kwd>
<kwd>biophysical</kwd>
<kwd>fronts</kwd>
<kwd>fishing</kwd>
<kwd>lagrangian coherent structures</kwd>
<kwd>social-ecological systems</kwd>
<kwd>livelihoods</kwd>
</kwd-group>
<contract-num rid="cn001">GEO-1211972</contract-num>
<contract-num rid="cn001">DGE-1148900</contract-num>
<contract-sponsor id="cn001">National Science Foundation<named-content content-type="fundref-id">10.13039/100000001</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="1"/>
<equation-count count="2"/>
<ref-count count="79"/>
<page-count count="13"/>
<word-count count="11466"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>When quantifying the dynamics of coupled natural-human systems it is vital to consider the ways in which human activity occurs and where it is focused (Levin et al., <xref ref-type="bibr" rid="B57">2013</xref>). For example, the spatial distribution of agriculture, urban expansion, and maritime shipping have respectively affected fire regimes in African savannas (Archibald et al., <xref ref-type="bibr" rid="B2">2012</xref>), whole terrestrial food-webs (Faeth et al., <xref ref-type="bibr" rid="B21">2005</xref>), and large-scale patterns of phytoplankton diversity (Hallegraeff, <xref ref-type="bibr" rid="B32">1998</xref>). So too in fisheries, where the spatial distribution of fishing effort is both fundamental to the organization of marine food-webs (Essington et al., <xref ref-type="bibr" rid="B20">2006</xref>) and to our calculations of sustainable fisheries production (Murawski et al., <xref ref-type="bibr" rid="B63">2005</xref>). Indeed, almost all fisheries management actions are designed to influence the (spatial) behavior of fishermen (Branch et al., <xref ref-type="bibr" rid="B8">2006</xref>; Hilborn, <xref ref-type="bibr" rid="B39">2007</xref>), yet the issue of where they decide to fish and why, remains a key obstacle to achieving sustainable fisheries (Fulton et al., <xref ref-type="bibr" rid="B25">2011</xref>; Hobday et al., <xref ref-type="bibr" rid="B41">2011</xref>). This uncertainty is not for want of effort. Many disciplines have examined fishing location choice, from economics (Gordon, <xref ref-type="bibr" rid="B29">1954</xref>; Holland and Sutinen, <xref ref-type="bibr" rid="B42">2000</xref>) to anthropology (Orbach, <xref ref-type="bibr" rid="B66">1977</xref>) to ecology (Hilborn and Ledbetter, <xref ref-type="bibr" rid="B40">1979</xref>). From this work it is clear that fishermen behavior is at least partially explained by a desire to maximize individual well-being (via profits), but that this consideration alone is not the whole story. In the absence of a full understanding of the factors driving fishermen&#x00027;s spatial behavior, their actions will continue to surprise fisheries managers, potentially undermining management systems and jeopardizing the sustainability of fisheries (Fulton et al., <xref ref-type="bibr" rid="B25">2011</xref>).</p>
<p>The choice of where to fish is in part determined by gradients in ocean properties such as temperature, salinity, and pollution, that persist over timescales equivalent to or greater than those of a fishing trip (Lehodey et al., <xref ref-type="bibr" rid="B55">1997</xref>). These often sharp gradients are created by fronts of various kinds, including buoyancy currents, tidal mixing, shelf-slope/shelf-break flow, upwelling and boundary currents, and marginal ice zone fronts. Most fronts are characterized by a surface convergence, which contributes to the aggregation of nutrients and increases in primary production (Kahru et al., <xref ref-type="bibr" rid="B46">2012</xref>). As a consequence, ocean fronts collectively define a dynamic mosaic of transient micro-habitats that numerous organisms use (MacKenzie et al., <xref ref-type="bibr" rid="B59">2004</xref>), and are known to be &#x0201C;hot spots" of marine life (Bost et al., <xref ref-type="bibr" rid="B7">2009</xref>; God&#x000F8; et al., <xref ref-type="bibr" rid="B28">2012</xref>; Scales et al., <xref ref-type="bibr" rid="B71">2014</xref>; Woodson and Litvin, <xref ref-type="bibr" rid="B79">2015</xref>). Fronts are observable in satellite derived maps of sea surface temperature, primary production and ocean color. However, cloud cover, flow discontinuities and noise, and low spatial resolution of satellite data present challenges for identifying the location of fronts (Ullman and Cornillon, <xref ref-type="bibr" rid="B75">2000</xref>). To overcome these challenges, recent work has focused on the spatiotemporal extent of fronts identified by Lagrangian Coherent Structures (LCSs; frontal areas of convergence in the surface ocean, see Figure <xref ref-type="fig" rid="F1">1</xref> and Supplementary <xref ref-type="supplementary-material" rid="SM11">Movie</xref>; Harrison and Glatzmaier, <xref ref-type="bibr" rid="B36">2012</xref>). These are areas of attraction and repulsion, typically calculated for the surface ocean, which identify frontal structures in advected tracers (d&#x00027;Ovidio et al., <xref ref-type="bibr" rid="B15">2004</xref>; Lehahn et al., <xref ref-type="bibr" rid="B54">2007</xref>). They have also been shown to correspond to biological activity. For example, it has been shown that the spatial distribution of planktonic organisms (Harrison et al., <xref ref-type="bibr" rid="B37">2013</xref>), foraging frigate birds (Olascoaga et al., <xref ref-type="bibr" rid="B65">2008</xref>), elephant seals (Della Penna et al., <xref ref-type="bibr" rid="B13">2015</xref>), and baleen whales (Kai et al., <xref ref-type="bibr" rid="B47">2009</xref>), correspond with the location of LCSs. However, while there exists evidence that fishing effort is colocated with LCSs (Prants et al., <xref ref-type="bibr" rid="B68">2012</xref>), it remains unknown whether this is a systematic relationship across different marine systems and across fisheries, and also whether any relationship between LCSs and fishing influences catch rates and the revenue generated by fishing.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Finite-time Lyapunov Exponent values (<italic>d</italic><sup>&#x02212;1</sup>) from the U.S. West Coast on January 1st 2009. Strong frontal activity or&#x02014;Lagrangian Coherent Structures&#x02014;are generally considered values &#x0003E; 0.1 <italic>d</italic><sup>&#x02212;1</sup>. Overlaid are mock locations of several fishing events for different fisheries: the tuna fishery in red and the salmon fishery in purple. Due to privacy restrictions we will not show actual fishing locations, instead these are random points sampled from within the 95% kernel density contour of each fishery.</p></caption>
<graphic xlink:href="fmars-05-00046-g0001.tif"/>
</fig>
<p>To understand whether fishermen track LCSs and whether doing so has economic impacts, we compiled data on the location of over 1,000 fishing vessels every hour in the U.S. California Current Large Marine Ecosystem (CCLME) for the period 2009&#x02013;2013 produced from a Vessel Monitoring System (VMS), and collated corresponding fisheries catch and price data. We focused on the spatial dynamics of vessels operating in three commercially important fisheries: the albacore tuna (<italic>Thunnus alalunga</italic>) troll, chinook and coho salmon (<italic>Oncorhynchus tshawytscha</italic> and <italic>Oncorhynchus kisutch</italic> respectively) troll and pink shrimp (<italic>Pandalus jordani</italic>) trawl fisheries, which account for roughly 35, 45, and 50 million US dollars in annual revenue respectively (values from <ext-link ext-link-type="uri" xlink:href="www.oceaneconomics.org/">www.oceaneconomics.org/</ext-link>). Complementing this, we gathered oceanographic information for the same time period, from a 4-dimensional variational (4D-Var) data-assimilation Regional Ocean Modeling System (ROMS) solution to the US west coast (Moore et al., <xref ref-type="bibr" rid="B61">2011a</xref>). This ROMS model operates at a higher spatial and temporal resolution than satellite altimetry data, which is commonly used to answer similar questions, and assimilates as much data as possible to make the best possible reconstruction of past oceanic conditions for the U.S. West Coast. We used the ROMS velocity fields to identify LCSs, and with these data, we assessed whether fishing events from the tuna, salmon and shrimp fisheries are associated with attracting LCSs, and whether this impacts the revenue generated by fishing.</p>
</sec>
<sec sec-type="methods" id="s2">
<title>Methods</title>
<p>To assess the relationship between the spatial distribution of fishing effort and the location of LCSs, we synthesized fisheries landings data. Using these data we then defined fisheries for the CCLME. Then, using spatially explicit vessel monitoring data for the tuna, salmon and pink shrimp fisheries, we identified fishing locations. In parallel to these analyses of fisheries data, oceanographic data produced from a regional ocean model were used to identify LCSs in the CCLME for the same time-period as covered by the fisheries data. Combining the two, we assessed whether vessels, operating in different fisheries, appear to search for and catch fish preferentially on LCSs. The following subsections expand on each of these steps.</p>
<sec>
<title>Identifying fisheries from landings data</title>
<p>Fisheries catch and price data were obtained from fish-tickets compiled through the Pacific Fisheries Information Network (PacFIN), and describe the time, location, catch and revenue of 340,466 trips, spanning 5,980 vessels for the time period 2009&#x02013;2013. Using these data, we identified fisheries as groups of similar trips based on what was caught. These trip-groups are otherwise called m&#x000E9;tiers (mostly in Europe; Deporte et al., <xref ref-type="bibr" rid="B14">2012</xref>). At its heart, a m&#x000E9;tier analysis groups trips based on the gear used, and the revenue and species composition of landings (Davie and Lordan, <xref ref-type="bibr" rid="B12">2011</xref>; Boonstra and Hentati-Sundberg, <xref ref-type="bibr" rid="B6">2016</xref>). This methodology requires choices in the way similarity among trips are measured, a clustering algorithm for grouping similar trips together, and scalability so that it can be applied to the 340,466 trips we had data for.</p>
<p>The first step was to calculate the similarity of every pair of trips, measured using the Hellinger distance <italic>D</italic> (Legendre and Legendre 2012). The Hellinger distance was calculated from the species composition of two fishing trips <italic>A</italic> and <italic>B</italic> as follows:</p>
<disp-formula id="E1"><label>(1)</label><mml:math id="M1"><mml:mtable class="eqnarray" columnalign="right center left"><mml:mtr><mml:mtd><mml:msub><mml:mrow><mml:mi>D</mml:mi></mml:mrow><mml:mrow><mml:mi>A</mml:mi><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:mstyle displaystyle="true"><mml:munderover accentunder="false" accent="false"><mml:mrow><mml:mo>&#x02211;</mml:mo></mml:mrow><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn>1</mml:mn></mml:mrow><mml:mrow><mml:mi>S</mml:mi></mml:mrow></mml:munderover></mml:mstyle><mml:msup><mml:mrow><mml:mrow><mml:mo stretchy="false">(</mml:mo><mml:mrow><mml:msub><mml:mrow><mml:mi>a</mml:mi></mml:mrow><mml:mrow><mml:mi>i</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mrow><mml:mi>b</mml:mi></mml:mrow><mml:mrow><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mo stretchy="false">)</mml:mo></mml:mrow></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
<p>where <italic>a</italic><sub><italic>i</italic></sub> is the fraction of revenue derived from species <italic>i</italic> on trip <italic>A</italic>, <italic>b</italic><sub><italic>i</italic></sub> is the fraction of revenue derived from species <italic>i</italic> on trip <italic>B</italic>, and <italic>S</italic> is the total number of species collected in both trips. Hence, as the difference in revenue attributable to each of the <italic>S</italic> species increases, trips <italic>A</italic> and <italic>B</italic> become increasingly dissimilar. Applied to every pair of fishing trips results in a trip distance matrix.</p>
<p>The next step was to transform the Hellinger distance matrix into a similarity matrix. This was done by subtracting each element of the distance matrix from the maximum value of the whole matrix. From this similarity matrix, we identified m&#x000E9;tiers as groups of trips with similar target assemblages using the infoMap community detection algorithm (Rosvall and Bergstrom, <xref ref-type="bibr" rid="B69">2008</xref>). This algorithm examines networks (which the similarity matrix represents, where nodes are trips and edges are trip similarity) for subgraphs more interconnected to one another than the network in which it is embedded.</p>
<p>Our dataset contained 340,466 unique trips, and due to computational limits, we were not able to implement the infoMap algorithm using a single matrix containing all pairwise trip similarities. To overcome this computational challenge, and obtain manageable matrix sizes, we first performed the m&#x000E9;tier analysis on one year&#x00027;s worth of landings data, for example 2010. Then for each trip in other years (e.g., 2009, 2011, 2012, and 2013), we identified which 2010 trip was &#x0201C;nearest&#x0201D; to it, in terms of species composition, using a k-nearest neighbors algorithm. Each trip in 2009, 2011, 2012, and 2013 then inherited the m&#x000E9;tier of its nearest 2010 trip. In this way, we managed to assign all trips from the whole dataset to specific m&#x000E9;tiers. We tested this method using different &#x0201C;base&#x0201D; years (i.e., different to 2010 in the above example), and found our results robust to this decision.</p>
<sec>
<title>Linking fishery definitions to vessel-monitoring system data</title>
<p>In total, the fisheries trip data contained numerous fisheries. We subsetted these data and focused our analysis on the albacore tuna, salmon and pink shrimp m&#x000E9;tiers. Pacific albacore tuna is a migratory species, caught relatively far from shore (see Figure <xref ref-type="fig" rid="F1">1</xref>: red dots) by towing artificial lures with barbless hooks or &#x0201C;trolling.&#x0201D; Of the three species we have studied, albacore tuna is the most likely to have a behavioral relationship with LCSs. Indeed there is strong anecdotal evidence that tuna fishermen look for frontal features when trolling for tuna (gained from personal communications with tuna fishermen). The salmon fishery consists mainly of chinook and coho salmon, which similarly to albacore tuna are caught by trolling, but are found mainly in areas closer to shore. Pink shrimp are associated with soft-sediment benthos, and are harvested by trawling nets along the sea-floor. As a consequence, of the three focal species, <italic>they are the least likely to be affected by surface LCSs</italic>, which will only impact the sea floor through the sinking of organic particles from phytoplankton blooms, which occurs over time-scales longer than considered here. Hence, we included shrimp precisely because LCSs are expected to have no relationship.</p>
<p>The locations of tuna, salmon and shrimp vessels were obtained from a Vessel Monitoring System (VMS) dataset provided by the National Marine Fisheries Service&#x00027;s Office of Law Enforcement (OLE). VMS is required for all vessels commercially fishing federally managed groundfish in the past 5 years. Many of these &#x0201C;groundfish&#x0201D; vessels operate in other fisheries and as a consequence the VMS data contained numerous tuna, salmon and shrimp trips. Vessel locations have an accuracy of approximately 500 meters and in total, we amassed 22 million GPS pings, hourly over the period 2009-2013, for 1,183 vessels. However, no contextual data is provided with the VMS data, for example when a vessel is in port, when it is fishing, or what kind of vessel it is. As a consequence, the first challenge with these data is to link them to the fisheries definitions obtained from the trip landings data, and then identify different spatial behaviors&#x02014;searching for and catching fish vs. transiting&#x02014;from the location time-series.</p>
<p>The first step to analyzing the VMS data was to identify trips. This was done in two steps. First, we assigned any VMS location less than 1.5km from the shore and stationary for greater than 3 hours as &#x0201C;in-port&#x0201D;. Distances to land were calculated using NOAA&#x00027;s GSHHG high-resolution geography dataset (Wessel and Smith, <xref ref-type="bibr" rid="B77">1996</xref>). This resulted in a subset of the VMS data that included only &#x0201C;at-sea&#x0201D; locations. Then, trip-times (time-out and time-in) from the fisheries landing ticket data were matched with the at-sea VMS data points. This matching allowed us to assign a unique index for sets of VMS data-points associated with a distinct fishing trip. Furthermore, once the fisheries analysis of the landing ticket data was performed, we were also able to assign a fishery to each trip in the at-sea VMS data. Doing so identified what species was being harvested on each trip in the VMS database.</p>
<p>The last step was to link a NOAA Fisheries West Coast Groundfish Observer Program data to the at-sea VMS data, for the purpose of validating the spatial behavior segmentation (i.e., identifying when a vessel was fishing or not). This involved matching vessel identifiers and time-points in each database. These observer data included descriptions of the vessel, the location, and time-in and -out of a fishing set (i.e., the time when fishing happened) for 8,932 trips spanning 334 vessels over the period 2009&#x02013;2013. We identified which at-sea VMS data points lay within these set-in/set-out time-spans, and used this information in validating the behavioral segmentation algorithm described below. Importantly, the NOAA observer data only covered a fraction of the trips in the at-sea VMS data, for example 13% of shrimp trips.</p>
</sec>
</sec>
<sec>
<title>Vessel monitoring system data behavioral segmentation</title>
<p>The at-sea VMS data remained a collection of lat/lon time-series, grouped by trip and fishery. In order to identify when and where fishing occurred from these time-series, we developed an unsupervised behavioral segmentation algorithm, which works as follows. Vessel speed was calculated as the distance traveled per unit time between sequential location pings for all trips, making sure to also calculate the spatial mid-point between consecutive lat/lon points. Furthermore, for each trip, checks were made for extreme and unrealistic speeds. Then, for each vessel we subsetted trips by fishery, and calculated empirical speed distributions. To these empirical distributions we fitted Gaussian Mixture Models (GMM), varying in the number of components (i.e., modes) modeled. The &#x0201C;best&#x0201D; model was selected using Bayesian Information Criterion. The last step was to identify the 50th percentile value of the first Gaussian component of the best model. This speed value was used as a cut-off: any locations with speeds less than or equal to this value were assumed to be fishing-intended or fishing activity. This speed identifies the where the first component (i.e., fishing) becomes less likely than the second component (i.e., steaming). As an example, Figure <xref ref-type="supplementary-material" rid="SM1">S1</xref> shows the empirical speed distributions, the best GMMs, and the cut-off speeds for a vessel that participated in a tuna, salmon and shrimp trip. All locations with speeds less than or equal to the cut-off, for that specific type of trip and for that vessel, were assumed to be fishing or fishing-intended events.</p>
<p>Vessel-speed criteria are commonly use to infer whether a VMS record corresponds to fishing activity (Murawski et al., <xref ref-type="bibr" rid="B63">2005</xref>; Eastwood et al., <xref ref-type="bibr" rid="B18">2007</xref>; Lee et al., <xref ref-type="bibr" rid="B53">2010</xref>; Gerritsen and Lordan, <xref ref-type="bibr" rid="B26">2011</xref>). For example, vessel speeds are commonly used to determine when trawling is in progress, with 8 knots considered to represent the upper limit of trawling speed for North Sea beam trawlers (Dinmore et al., 2003). Some authors who have used a similar approach have reported a significant number of false-positive results (where vessels were traveling at fishing speeds, but were not actually engaged in fishing). However, false-negative results tend to be rare. Indeed, previous work has included directionality in addition to speed, as determinants of fishing, but they only resulted in a very small improvement on speed alone (Mills et al., <xref ref-type="bibr" rid="B60">2007</xref>). Further, <italic>unsupervised</italic> behavioral segmentation algorithms like ours are commonly used (Murawski et al., <xref ref-type="bibr" rid="B63">2005</xref>; Gerritsen et al., <xref ref-type="bibr" rid="B27">2012</xref>; Jennings and Lee, <xref ref-type="bibr" rid="B44">2012</xref>), and although <italic>supervised</italic> classification methods are available (Joo et al., <xref ref-type="bibr" rid="B45">2015</xref>), and access to the NOAA observer data meant we had the means to construct and test them, there are several caveats to the observer data (see paragraph below), and ultimately we would only be able to develop supervised methods for a small subset of fisheries due to data restrictions. Furthermore, these supervised classification methods would perform poorly for those fisheries to which they could not be trained (i.e., the tuna and salmon fisheries). As a consequence, we used a simple unsupervised approach based solely on speed that could be applied across fisheries. We used the NOAA observer data <italic>post-hoc</italic> to calculate the precision of our method, and we found it to perform well for all fisheries for which we could validate, averaging 83% (see Table <xref ref-type="table" rid="T1">1</xref>; precision was calculated from the frequency of true-positives&#x02014;locations that both the NOAA observer data and our algorithm identified as fishing.). Importantly, we accounted for the precision of our classification method using bootstrap methods in all subsequent statistical analyses, meaning our results are robust to the choice of using a simple unsupervised behavioral segmentation method.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>The precision of the VMS segmentation algorithm, applied to different m&#x000E9;tiers that we had NOAA observer data for.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Common Name</bold></th>
<th valign="top" align="center"><bold>N</bold></th>
<th valign="top" align="center"><bold>Precision</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Sablefish (longline)</td>
<td valign="top" align="center">756</td>
<td valign="top" align="center">0.659</td>
</tr>
<tr>
<td valign="top" align="left">Sablefish (pot)</td>
<td valign="top" align="center">277</td>
<td valign="top" align="center">0.884</td>
</tr>
<tr>
<td valign="top" align="left">Dungeness crab (pot)</td>
<td valign="top" align="center">78</td>
<td valign="top" align="center">0.962</td>
</tr>
<tr>
<td valign="top" align="left">Dover sole (trawl)</td>
<td valign="top" align="center">5626</td>
<td valign="top" align="center">0.828</td>
</tr>
<tr>
<td valign="top" align="left">California halibut (trawl)</td>
<td valign="top" align="center">62</td>
<td valign="top" align="center">0.516</td>
</tr>
<tr>
<td valign="top" align="left">Pacific pink shrimp (trawl)</td>
<td valign="top" align="center">1651</td>
<td valign="top" align="center">0.732</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Precision is the fraction of VMS-fishing behaviors that were actually fishing events (i.e., true positives). The reasonable level of precision of our algorithm, across this broad range of met&#x000ED;ers, meant we were confident of its use for the tuna and salmon (for which we had no observer data) and shrimp met&#x000ED;ers. The average precision of the algorithm (83%) was used in the subsequent analyses</italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>Another challenge that we came across, that affected our decision to use an unsupervised classification scheme, was systematic error in the start and end times of fishing in the NOAA observer data. For example, in Figure <xref ref-type="supplementary-material" rid="SM2">S2</xref> we show a mock fishing trajectory where colored dots identify a fishing vessel&#x00027;s location, and the color the speed. We cannot show the tracks of a real fishing trajectory, but this mock-up copies exactly a problem seen throughout our data. Specifically, the NOAA observer set-in and set-out dates identify VMS locations that are not likely fishing events. In the top-panel of Figure <xref ref-type="supplementary-material" rid="SM2">S2</xref>, the dots surrounded by a grey-circle identify those VMS locations identified as fishing by the observer data. It is obvious that the observer data suggest this vessel is fishing, while steaming fast away from the true fishing location (the knot of points in blue). In contrast, our speed algorithm identifies what by eye are likely the true fishing locations (gray circles in the bottom panel of Figure <xref ref-type="supplementary-material" rid="SM2">S2</xref>). This potential error in the NOAA observer data contributed to our decision not to develop a supervised classification scheme.</p>
</sec>
<sec>
<title>Oceanographic data</title>
<p>The spatial distribution of attracting LCSs for the whole U.S. California Current Large Marine Ecosystem, for the period 2009-2013, was estimated using modeled surface ocean currents produced from a 4-dimensional variational (4D-Var) data assimilation Regional Ocean Modeling System (ROMS) solution (Haidvogel et al., <xref ref-type="bibr" rid="B31">2000</xref>, <xref ref-type="bibr" rid="B30">2008</xref>; Shchepetkin and McWilliams, <xref ref-type="bibr" rid="B73">2003</xref>, <xref ref-type="bibr" rid="B74">2005</xref>). The ROMS model and domain is described in detail elsewhere (Moore et al., <xref ref-type="bibr" rid="B61">2011a</xref>) so only a brief description is given here. The domain spans the region 134&#x000B0;W to 116&#x000B0;W and 31&#x000B0;N to 48&#x000B0;N, extending from midway down the Baja Peninsula to Vancouver Island at 1/10 degree (roughly 10 km) resolution, with 42 terrain-following levels resolving vertical structure in ocean properties. We chose to use surface currents from the high-resolution ROMS reanalysis to identify LCSs and corresponding fronts, instead of geostrophic velocity fields derived from satellite altimetry used in several previous studies of LCSs. We made this choice for several reasons: (i) the altimetry-based approach cannot be applied reliably in coastal regions, where the geostrophic balance no longer holds because of strong lateral and bottom boundaries and nearshore forcing; (ii) geostrophic surface currents derived from satellite altimetry are only available at coarser spatial resolution (at 1/4<sup>o</sup> or roughly 25 km in our domain); (iii) altimetry accuracy decreases near the coast, where much fishing occurs, due to measurements being affected by the presence of land in the satellite footprint (i.e., &#x0003C;50 km from the shore).</p>
<p>The circulation of the US west coast is dominated by the California Current system, which is characterized by energetic mesoscale variability, and by pronounced seasonal upwelling driven by alongshore wind stress and offshore wind stress curl. High productivity in the California Current system is sustained by the supply of cool, nutrient-rich waters upwelled to the sunlit surface layer by alongshore winds. Coastal upwelling has a strong signature in sea surface temperature (SST) and chlorophyll concentration as illustrated in Figures <xref ref-type="supplementary-material" rid="SM3">S3</xref>, <xref ref-type="supplementary-material" rid="SM4">S4</xref>, which show the observed SST and chlorophyll concentration for August 23rd 2010. Figures <xref ref-type="supplementary-material" rid="SM3">S3</xref>, <xref ref-type="supplementary-material" rid="SM4">S4</xref> also illustrate the complex circulation and intense mesoscale activity characterizing the dynamics of the California Current system circulation.</p>
<p>In order to build reliable estimates of past ocean conditions in this highly dynamic region and accurately represent the complex evolution of the true ocean state, the ROMS model uses 4D-Var data assimilation, which synthesizes numerous oceanic observations to produce the best linear unbiased estimate of the circulation of the California Current system (for an extensive description of the ROMS 4D-Var capability and implementation, see Moore et al., <xref ref-type="bibr" rid="B61">2011a</xref>,<xref ref-type="bibr" rid="B62">b</xref>). For example, daily AVISO Sea Level Anomalies provide information of the sea surface height; and sea surface temperature data (SST) is obtained from numerous satellite platforms (i.e., AVHRR/PathFinder, AMSR-E, GOES and MODIS-Terra). The ROMS 4D-Var data assimilation system produces daily snapshots of the full 3-dimensional structure of the ocean extending from the surface to the ocean bottom. To utilize model information with the best agreement with past observations, we used the posterior circulation estimate, provided online here <ext-link ext-link-type="uri" xlink:href="http://oceanmodeling.ucsc.edu/">http://oceanmodeling.ucsc.edu/</ext-link>. Examples of the SST and surface velocity fields produced by the ROMS 4D-Var data assimilation system are shown in Figure <xref ref-type="supplementary-material" rid="SM5">S5</xref>, which should be compared to empirical observations for the same day shown in Figure <xref ref-type="supplementary-material" rid="SM3">S3</xref> (surface temperature) and Figure <xref ref-type="supplementary-material" rid="SM4">S4</xref> (surface chlorophyll) for a qualitative verification of its ability to reproduce past ocean conditions.</p>
</sec>
<sec>
<title>Lagrangian coherent structures</title>
<p>Using the ROMS modeled surface velocities, we identified the location of LCSs through time (Castruccio et al., <xref ref-type="bibr" rid="B10">2013</xref>). These flow features are material curves that map filamentation and transport boundaries (Harrison et al., <xref ref-type="bibr" rid="B37">2013</xref>). Fluid particles straddling a LCS will either diverge (repelling LCS) or converge (attracting LCS) in forward time (Haller and Yuan, <xref ref-type="bibr" rid="B35">2000</xref>). LCSs thus delineate the boundary between dynamically distinct regions of the flow field, effectively allowing us to visualize the skeleton of turbulent transport (e.g., Haller, <xref ref-type="bibr" rid="B34">2002</xref>; d&#x00027;Ovidio et al., <xref ref-type="bibr" rid="B15">2004</xref>; Shadden et al., <xref ref-type="bibr" rid="B72">2005</xref>). Whereas the resolution of the ROMS velocities may appear relatively coarse compared to the spatial scales of fishing, the topological structure of surface ocean LCSs has been shown to be robust to noise and low spatial resolution velocity fields (Harrison and Glatzmaier, <xref ref-type="bibr" rid="B36">2012</xref>). The spatial organization of LCSs has a large impact on the coastal environment not only because they influence the dispersion of tracers in the water but also because by separating dynamically distinct regions of flow, they can define fluid dynamical niches, which contribute to the structuring of marine ecosystems (d&#x00027;Ovidio et al., <xref ref-type="bibr" rid="B15">2004</xref>; Cott&#x000E9; et al., <xref ref-type="bibr" rid="B11">2011</xref>). We focused on attracting LCSs because they identify regions of confluence and shear, and have been shown to correspond strongly with the location of fronts and the foraging behavior of marine top predators such as frigate birds (Kai et al., <xref ref-type="bibr" rid="B47">2009</xref>), elephant seals (Della Penna et al., <xref ref-type="bibr" rid="B13">2015</xref>), and baleen whales (Cott&#x000E9; et al., <xref ref-type="bibr" rid="B11">2011</xref>).</p>
<p>There have been various proposed methods for identifying attracting LCSs. Among all these approaches, the definition of LCSs as ridges of the Finite-time Lyapunov Exponent (FTLE) field has been especially successful. Near LCSs, neighboring fluid parcels are strained by differing amounts by the flow field. These differences in stretching rates allow the detection of LCSs by Lyapunov exponents, which measures the rate of separation of infinitesimally close trajectories exhibiting exponential behavior with time (Nese, <xref ref-type="bibr" rid="B64">1989</xref>). It is defined as:</p>
<disp-formula id="E2"><label>(2)</label><mml:math id="M2"><mml:mtable class="eqnarray" columnalign="right center left"><mml:mtr><mml:mtd><mml:mo>&#x003BB;</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:munder class="msub"><mml:mrow><mml:mo class="qopname">lim</mml:mo></mml:mrow><mml:mrow><mml:mi>t</mml:mi><mml:mo>&#x02192;</mml:mo><mml:mi>&#x0221E;</mml:mi></mml:mrow></mml:munder></mml:mstyle><mml:mfrac><mml:mrow><mml:mn>1</mml:mn></mml:mrow><mml:mrow><mml:mi>t</mml:mi></mml:mrow></mml:mfrac><mml:mi>l</mml:mi><mml:mi>n</mml:mi><mml:mfrac><mml:mrow><mml:msub><mml:mrow><mml:mi>&#x003B4;</mml:mi></mml:mrow><mml:mrow><mml:mi>t</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mrow><mml:mi>&#x003B4;</mml:mi></mml:mrow><mml:mrow><mml:mn>0</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mfrac><mml:mo>,</mml:mo></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
<p>where &#x003B4;<sub>0</sub> and &#x003B4;<sub><italic>t</italic></sub> are the initial deviation and the deviation at time <italic>t</italic>, respectively. This concept has been previously introduced to the flow analysis (Haller and Yuan, <xref ref-type="bibr" rid="B35">2000</xref>; Haller, <xref ref-type="bibr" rid="B33">2001</xref>). FTLEs measures the maximum separation of close-by particles of a time-dependent flow field after a fixed, finite particle advection time. Here we have computed the FLTE on a regular grid with 1/80 degree horizontal resolution (approximatively 1km in the CCS). We naturally used the initial separation &#x003B4;<sub>0</sub> of the particles equal to the grid spacing. The final separation &#x003B4;<sub><italic>t</italic></sub> is computed as the maximum separation after a particle advection time of 10 days, which is the typical mesoscale eddy-turnover time in the region. Large FTLE values identify regions where the stretching induced by mesoscale and submesoscale activity is strong and are typically organized in convoluted lines encircling submesoscale filaments. A line of local maxima of FTLE (more precisely, a ridge) can be used to predict the location of tracer fronts induced by horizontal advection and stirring; in other words, the location of LCSs. A snap-shot of the spatial distribution of backward FTLE values and the complementing probability distribution are shown in Figure <xref ref-type="fig" rid="F1">1</xref> and Figure <xref ref-type="supplementary-material" rid="SM6">S6</xref> respectively. Further, an animation showing the dynamic nature of FTLE fields is provided in the Supplementary Movie. These maps and the animation highlight the complex spatial patterns exhibited by LCSs (large FTLE values), and the probability distribution shows that FTLE values are roughly log-normally distributed, with a mode around 0.1<italic>d</italic><sup>&#x02212;1</sup>. The LCS&#x00027;s ability to outline observed tracer patterns in geophysical flows is well illustrated by Figure <xref ref-type="supplementary-material" rid="SM5">S5</xref> where LCSs align with frontal structures and filamentation in temperature.</p>
</sec>
<sec>
<title>Statistical analysis of fishing and lagrangian coherent structures</title>
<p>The behaviorally segmented VMS data consists of a list of locations where fishing or fishing-intended activities occurred over the period 2009-2013. In total, these data included 3233 tuna, 2201 salmon and 7762 shrimp fishing locations. We then linearly interpolated in space and time the FTLE data, produced from the ROMS modeled velocity data, to these locations. The result is a unique FTLE value per fishing location. The next step was to generate a null dataset with which to compare VMS-FTLE values. Following the approach of (Cott&#x000E9; et al., <xref ref-type="bibr" rid="B11">2011</xref>), for every fishing location estimated from the VMS data, a random location was chosen from within the 95% kernel polygon of the fishing location&#x00027;s parent fishery (see Figure <xref ref-type="supplementary-material" rid="SM7">S7</xref> for maps showing the spatial distribution of fishing effort for each fishery). The kernel density estimation was performed on each fishery&#x00027;s fishing locations only, and results often identified numerous distinct polygons. In this case, random points were created by first choosing a polygon probabilistically, in proportion to its area, and then a choosing a location randomly from within that polygon. FTLE values were then linearly interpolated in space and time to each random point. The result is a set of random points in the &#x0201C;preferred fishing region&#x0201D; of each fishery. These random-FTLE distributions were then compared with the corresponding VMS-FTLE distributions.</p>
<p>In order to explore differences between the VMS and random-FTLE distributions, we performed Kolmogorov-Smirnov tests and <italic>G</italic>-tests of goodness-of-fit. The Kolmogorov-Smirnov test quantifies the significance of the largest difference between two cumulative density functions, whereas the <italic>G</italic>-test quantifies the significance of the difference in the frequency of particular events. Both Kolmogorov-Smirnov and <italic>G</italic>-tests were repeated 1,000 times, subsampling 83% of the VMS- and random-FTLE distributions to reflect the behavioral segmentation precision. For the <italic>G</italic>-test, we calculated the frequency of VMS- and random-FTLE points greater than or less than 0.1 <italic>d</italic><sup>&#x02212;1</sup>, which is a threshold value that corresponds to frontogenesis timescales faster than 1 month&#x02014;a time span that has been shown to be ecologically significant, attracting numerous taxa (d&#x00027;Ovidio et al., <xref ref-type="bibr" rid="B15">2004</xref>; Olascoaga et al., <xref ref-type="bibr" rid="B65">2008</xref>; Kai et al., <xref ref-type="bibr" rid="B47">2009</xref>).</p>
<p>We repeated this statistical comparison of VMS-FTLE and random-FTLE distributions, using a different random test. Here, instead of choosing random points from within the 95% contour of each fishery, we chose them randomly from within the whole U.S. CCLME domain. Like the fishery-specific random test, we performed Kolmogorov-Smirnov tests and <italic>G</italic>-tests of goodness-of-fit.</p>
<p>In addition to testing whether fishing was randomly associated with high FTLE values and LCSs, or not, we also explored whether fishing on high FTLE values impacts the revenue generated by a trip. To do so, we performed linear univariate regression analysis and fit linear mixed models with the maximum VMS-FTLE value per trip as the explanatory variable, and trip-revenue as the dependent variable. In the case of the linear mixed models, vessel length was additionally included as a fixed effect, and vessel-ID as a random effect. In order to estimate the significance of the regression parameters, we bootstrapped these analyses by taking only 83% of values, reflecting the expected behavioral segmentation precision, and repeating the regression analyses 1,000 times. This bootstrap approach allowed us to estimate a distribution and <italic>p</italic>-value for each regression parameter (i.e., the slope).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<p>The VMS-FTLE and random-FTLE distributions for the tuna, salmon and shrimp fisheries are shown in Figure <xref ref-type="fig" rid="F2">2</xref>. Values range from past &#x02212;0.1 <italic>day</italic><sup>&#x02212;1</sup> to 0.5 <italic>day</italic><sup>&#x02212;1</sup>, with median values for each fishery all around 0.1 <italic>day</italic><sup>&#x02212;1</sup>. From these violin plots it is possible to identify systematic qualitative differences between the VMS-FTLE and random-FTLE values. For example, for the tuna fishery the VMS-FTLE median, 25th and 75th percentiles are all greater than the corresponding random-FTLE values. The Kolmogorov-Smirnov tests identified that the tuna and salmon VMS-FTLE distributions are significantly different from random, but that there is no significant difference between the shrimp VMS-FTLE and random-FTLE distributions (Figure <xref ref-type="fig" rid="F2">2</xref>; Kolmogorov-Smirnov <italic>p</italic>-values are given below the fishery names). In addition, we found that for the tuna, salmon and shrimp fisheries respectively, 57, 47.5, and 55% of fishing events happen on FTLE values &#x02265; 0.1<italic>day</italic><sup>&#x02212;1</sup>, relative to 52, 50.5, and 54% of random events (see Figure <xref ref-type="fig" rid="F3">3A</xref>). The <italic>G</italic>-test <italic>p</italic>-values reflect those from the Kolmogorov-Smirnov tests, that is the fraction of fishing events occurring on FTLE values &#x02265; 0.1<italic>day</italic><sup>&#x02212;1</sup> in the tuna and salmon fisheries are significantly different from random, whereas in contrast, there is no significant difference for shrimp fishing. The differences between the VMS- and random FTLE values, for the tuna fishery, are 2&#x02013;3 times less than those observed for foraging baleen whales (Cott&#x000E9; et al., <xref ref-type="bibr" rid="B11">2011</xref>) (the fraction of baleen whales found on FTLE values greater than 0.1<italic>day</italic><sup>&#x02212;</sup>1 was roughly 10&#x02013;15% greater than would be expected at random). This suggests that tuna fishermen are not tracking these surface frontal features as closely as baleen whales.</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Distributions of backward finite-time Lyapunov exponent values from VMS (left of axis/green) and random (right of axis/orange; sampled from within the 95% density contour of each fishery) locations. Median values are identified by the dashed lines, and upper and lower quartiles are identified by the dotted lines. Kolmogorov-Smirnov <italic>p</italic>-values are indicated below fishery names, indicating the significance of the difference between the VMS- and random-distributions (i.e., only the shrimp fishery VMS-FTLE distribution is not significantly different from random).</p></caption>
<graphic xlink:href="fmars-05-00046-g0002.tif"/>
</fig>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p><bold>(A)</bold> Bar-plot showing the fraction of fishing (red-tuna, gray-salmon, blue-shrimp) and random (gold; sampled from within the 95% density contour of each fishery) points with a FTLE value greater than or equal to 0.1<italic>d</italic><sup>&#x02212;1</sup>. <italic>G</italic>-test <italic>p</italic>-values are shown below each fishery label. <bold>(B)</bold> The difference in VMS- and random-FTLE survival functions (&#x00394;Surv) for the three fisheries with 95% confidence intervals. These curves highlight that tuna fishermen search for and catch fish in areas of the ocean with FTLE values greater than would be expected by chance. In contrast, salmon fishermen are found preferentially in areas with low FTLE values.</p></caption>
<graphic xlink:href="fmars-05-00046-g0003.tif"/>
</fig>
<p>To highlight the way in which these distributions differ from random, we calculated the difference in VMS- and random-FTLE survival functions, &#x00394;<italic>surv</italic>, bootstrapping values with an 83% sample size to create confidence intervals that reflect the behavioral segmentation precision (in the case for shrimp, for which we had fishing observations, we used 75% precision: see Table <xref ref-type="table" rid="T1">1</xref>). Survival functions identify the fraction of points with a certain FTLE value or greater (formally, they are 1 minus a cumulative density function), and the difference between the VMS- and random-survival functions identifies the magnitude and type of non-random association fishermen have with LCSs. For example, from the &#x00394;<italic>surv</italic> curves shown in Figure <xref ref-type="fig" rid="F3">3B</xref>, it is evident that tuna fishing events always occur on FTLE values greater than would be expected from random, that is the red curve is always positive over the entire range of FTLE values. This strongly suggest that tuna fishermen preferentially search for and catch tuna on LCSs, as quantified by FTLEs.</p>
<p>In contrast to tuna fishing, salmon fishing always occurs on FTLE values less than would be expected from random, that is &#x00394;<italic>surv</italic> values are negative. This can be interpreted in three ways. First, salmon fishermen may search for and catch fish in specific areas of the coast that have reduced frontal activity relative to nearby waters. Second, the spatial resolution of the ROMS model, from which the FTLE data were calculated, is not sufficient to resolve the physical features that salmon fishermen use to locate salmon. This is an important caveat to this work, and is expanded upon in the discussion. Third, salmon fishing may occur in places where LCSs were recently. We do not account for the possible time-lag between fishing and the presence of an LCS, but we can hypothesize that a time-lag would only happen if salmon track some trailing effect of LCSs. This is clearly possible, as the ecosystem effects of fluid convergence, caused by LCSs, will be integrated over space and time. In contrast to both tuna and salmon fishing, there is less difference between the shrimp VMS- and random-survival functions. In general, the shrimp &#x00394;<italic>surv</italic> curve hugs the zero-line (the point at which there is no significant difference to random). Hence, when combined with non-significant <italic>p</italic>-values from the Kolmogorov-Smirnov and <italic>G</italic>-tests, this information confirms our expectation that shrimp fishing has no spatial correspondence with LCSs and surface frontal features.</p>
<p>The results of the whole-domain random test contrast strongly with those produced from the fishery-specific random test (compare Figure <xref ref-type="fig" rid="F3">3</xref> and Figure <xref ref-type="supplementary-material" rid="SM8">S8</xref>). Here, all fisheries&#x02014;tuna, salmon and shrimp&#x02014;show negative &#x00394;surv curves. This identifies that each of these fisheries operates in areas of the California Current with low FTLE values <italic>relative to the rest of the domain</italic>. It is an interesting oceanographic question to ask why this happens, but because our focus is on the spatial relationship between individual fishing events and specific FTLE features, and not with LME-scale biophysical patterns, we do not answer it in this paper. One point to note is that the qualitative differences between the &#x00394;surv curves of each fishery are consistent across the fishery-specific and whole-domain tests. That is, the tuna curve is the least negative, the shrimp curve is an intermediate case and the salmon curve is the most negative. This qualitative consistency reflects the results of the fishery specific tests (i.e., that tuna fishermen track FTLE values that are relatively high when compared to shrimp and salmon fishermen).</p>
<p>These FTLE statistics reveal that tuna fishermen preferentially search for and catch fish in areas of high oceanic filamentation, in other words areas of the ocean with strong fronts. In contrast salmon fishing occurs in areas of low filamentation, and shrimp fishing occurs independently of the FTLE context. Do these behaviors translate into economic terms for fishermen? In order to answer this question we assessed the relationship between total revenue gained per trip (in <italic>log</italic><sub>10</sub>$) and the maximum FTLE value experienced whilst fishing, for every trip for each fishery (Figure <xref ref-type="fig" rid="F4">4</xref>). Our data consisted of 753 tuna, 670 salmon and 1907 shrimp trips (made by 94, 69, and 56 unique vessels respectively), and we found that for tuna fishing, there is a significant positive linear relationship between logarithmic trip revenue and the maximum FTLE value experienced while fishing. The slope of this linear relationship is 1.44 <italic>log</italic>$ per unit FTLE (with a standard error of 0.12 <italic>log</italic>$ per unit FTLE, calculated from bootstrapping the regression and subsampling the data by 83% to account for the segmentation precision). This univariate analysis implies that a tuna vessel that searches for and catches fish on a front with FTLE value 0.1 <italic>d</italic><sup>&#x02212;1</sup> can be expected to make roughly $3,500 on a single trip, while a vessel that catches fish on a front with FTLE value 0.4 <italic>d</italic><sup>&#x02212;1</sup> is expected to make $10,000 on a single trip, roughly three times the revenue. Flat and non-significant relationships were observed for salmon and shrimp trips indicating that trip revenue in these fisheries are not affected by the FTLE conditions experienced while fishing. These results are mirrored when trip revenue is substituted by trip landings (in units of mass: Figure <xref ref-type="supplementary-material" rid="SM9">S9</xref>), but they are not found when the <italic>expected</italic> FTLE experienced whilst fishing is used in place of the maximum (Figure <xref ref-type="supplementary-material" rid="SM10">S10</xref>; this highlights that the maximum FTLE experienced while fishing on a given trip is a better measure of catch success).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Logarithmic trip revenue (<italic>log</italic>$) as a function of the maximum finite-time Lyapunov exponent (FTLE) experienced while fishing on a particular trip, for all <bold>(A)</bold> tuna, <bold>(B)</bold> salmon, and <bold>(C)</bold> shrimp fisheries. Marker size is proportional to vessel length. We find a significant linear relationship for tuna fishing trips, indicating that tuna fishermen make more money the more they fish on fronts. This is confirmed using a linear mixture model that accounts for the effect of vessel size. Both the salmon and shrimp trips show flat and non-significant relationships.</p></caption>
<graphic xlink:href="fmars-05-00046-g0004.tif"/>
</fig>
<p>Vessel size plays a role in determining trip revenue (Figure <xref ref-type="fig" rid="F4">4</xref>: marker size is proportional to vessel length), because larger vessels have more storage space and hence a greater capacity for bringing fish to harbor. Using generalized linear mixed models (bootstrapping results using subsamples similar to the univariate analysis) we indeed found that vessel size and tuna revenues are strongly and positively correlated (slope &#x0003D; 1.805, <italic>p</italic>-value &#x0003C; 0.001). However, we still also found a positive and significant (albeit secondary) effect of FTLE values on trip revenue (slope &#x0003D; 0.582, <italic>p</italic>-value &#x0003C; 0.001). In contrast, vessel size and FTLE values were not important determinants of salmon (slopes = 0.588, 0.344; all <italic>p</italic>-values &#x0003E; 0.05) or shrimp (slopes &#x0003D; &#x02212;0.001, 0.369; all <italic>p</italic>-values &#x0003E; 0.05) trip revenues.</p>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>Our results have identified a connection between fine-scale physical ocean features and the spatial patterns of human activity, and ultimately the economic welfare of fishermen. Specifically, our results infer that fishermen targeting albacore tuna track LCSs, as identified by large backward Finite-time Lyapunov exponents. This is reflected in the location of tuna fishing events, which are consistently found on LCSs, more so than would be expected at random, and also in the revenue gained by tuna fishermen. That there is significant positive correspondence between the spatial distribution of fine-scale (and ephemeral) physical features of the ocean and the income of fishermen is surprising, for there are many possible reasons why one fisherman might make more money than another (Fulton et al., <xref ref-type="bibr" rid="B25">2011</xref>). For example, the institutional context, skill and experience, gear and weather all play a role in how much money a fishermen might make on any given trip (Hilborn, <xref ref-type="bibr" rid="B38">1985</xref>; Bjarnason and Thorlindsson, <xref ref-type="bibr" rid="B5">1993</xref>; Allison and Ellis, <xref ref-type="bibr" rid="B1">2001</xref>). Thus, the clear signal of the physical ocean environment&#x02014;the seascape&#x02014;in the revenue garnered by tuna fishermen highlights the potential for strong natural-human coupling in the California Current system.</p>
<p>In contrast to tuna fishing events, we observed a negative relationship between salmon fishing and FTLE values, and no relationship for shrimp fishing. The absence of any relationship for shrimp fishing was expected, as shrimp fishing targets the benthos (Eales and Wilen, <xref ref-type="bibr" rid="B17">1986</xref>), and as a consequence the surface physical structures described by FTLE values would not be expected to have an impact. However, the negative relationship seen in salmon fishing raises an important caveat of this work. It is impossible to tell whether this observation arises from an actual avoidance behavior of salmon fishermen, or whether this simply arises due to the inability for the ROMS model to resolve ocean processes close to shore, which is where salmon fishing typically occurs (see Figure <xref ref-type="fig" rid="F1">1</xref>). Although at the time of this work, the ROMS model data has a finer spatial resolution than satellite data, which is typically used to assess the impact of LCSs on predator foraging (e.g., Kai et al., <xref ref-type="bibr" rid="B47">2009</xref>; Cott&#x000E9; et al., <xref ref-type="bibr" rid="B11">2011</xref>; Della Penna et al., <xref ref-type="bibr" rid="B13">2015</xref>), it is still too coarse to resolve coastal zone processes, which likely include even finer-scale physical ocean features than the LCS assessed here. For example, the FTLE value of 0.1<italic>d</italic><sup>&#x02212;1</sup> that we used has been adopted in previous works studying the relationship between marine top-predators and LCSs (e.g., Cott&#x000E9; et al., <xref ref-type="bibr" rid="B11">2011</xref>). But these studies all focused on ocean regions far from shore (at least several tens of kilometers). Most likely, a different FTLE value will identify dominant frontal features in coastal zones. Hence, while 0.1<italic>d</italic><sup>&#x02212;1</sup> is appropriate for tuna fishing which occurs relatively far from shore, for studying the spatial behavior of vessels operating closer to shore, a different value should be identified using new higher resolution oceanographic information.</p>
<p>Indeed, the spatial scale at which fisherman behavior is assessed is a critical choice on the part of the investigator (Levin, <xref ref-type="bibr" rid="B58">1992</xref>). Our choice to use the ROMS modeled data (produced at a spatial resolution of roughly 10km) allowed us to assess the impact of physical ocean features at this same spatial scale, that persist over timescales of roughly less than a month. If we were to have used higher spatial resolution data, we would have assessed the impact of even finer spatial scale and potentially more ephemeral physical ocean features on fishing. Importantly, at some fine scale there will cease to be any relationship. This is the spatial and temporal scale at which fishermen no longer are able to sense and react to the seascape. It is an interesting question to ask at what scale this is, and it likely relates to the technology that fishermen employ to search for fish. Because it is related to technology, this minimum spatiotemporal scale is likely decreasing, as vessels improve in speed and sensory ability.</p>
<p>In contrast to examining finer scale behaviors, one could coarse-grain the (ROMS) data, and assess the relationship between fishing and aggregate measures of the seascape. These coarse graining experiments have been used to examine the relationship between pelagic predators and relatively large areas of the ocean, characterized by different biophysical properties (Scales et al., <xref ref-type="bibr" rid="B70">2017</xref>). Coarse graining experiments like these move the focus away from the behavior of individual fishermen and fishing vessels, and instead ask questions about where groups of vessels (fleets) operate. This is a vital consideration because while management typically focuses on directing the behavior of individual humans, their performance is often measured at the fleet level (Hilborn, <xref ref-type="bibr" rid="B39">2007</xref>), and fleets themselves vary in their composition and in where their aggregate effort is directed (e.g., Figure <xref ref-type="supplementary-material" rid="SM7">S7</xref>;Boonstra and Hentati-Sundberg, <xref ref-type="bibr" rid="B6">2016</xref>).</p>
<p>An important aspect of fisheries management that this study relates to is the impact of LCS-focused foraging on the organization and dynamics of the underlying marine food-web (Woodson and Litvin, <xref ref-type="bibr" rid="B79">2015</xref>). Spatially focused foraging and consumption has been shown to impact fish stocks through a phenomenon known as &#x0201C;local depletion&#x0201D; (Bertrand et al., <xref ref-type="bibr" rid="B4">2012</xref>), and in ecology these non-linearities in predator-prey interactions change the long-run mortality rate of prey, and the population growth rate of predators (Fryxell et al., <xref ref-type="bibr" rid="B23">2007</xref>). This is important because the ecosystem models that we currently employ to quantify and predict the dynamics of marine ecosystems (e.g., Watson et al., <xref ref-type="bibr" rid="B76">2015</xref>), possibly in the context of evaluating the potential response of management changes, use very simple linear mathematical functions to represent predator-prey encounter rates (e.g., the numerator in a Type II feeding function). These linear functions assume that prey are uniformly distributed over a given area, and predators move randomly over this area (Barbier and Watson, <xref ref-type="bibr" rid="B3">2016</xref>). We know that in reality that this is not so, and our analysis confirms this. It is fair to say that all models are abstractions of reality; however, it is important to know the effect of these simplifying assumptions on the predictive skill of our ecosystem models. Our analysis suggests that more sophisticated predator-prey encounter functions that account for spatially focused foraging, and other important factors such as cooperation and advanced fishing technologies, are likely to provide new insights into fisheries dynamics (Fulton et al., <xref ref-type="bibr" rid="B25">2011</xref>; Barbier and Watson, <xref ref-type="bibr" rid="B3">2016</xref>).</p>
<p>One major policy tool that will benefit from improved understanding of the fine-scale spatial behavior of fishermen is marine spatial planning. Marine spatial planning takes many forms, for example Marine Protected Areas (MPAs) which have been widely adopted around the world (Edgar et al., <xref ref-type="bibr" rid="B19">2014</xref>), and define areas of the ocean that are off-limits to fishing. Obviously, because vessels operating in different fisheries search for and catch fish in different places, MPAs will have a varying impact on people&#x00027;s income, depending on which fisheries they work in. Knowing in which oceanic regions and at what times of the year different fisheries operate is key to designing MPAs efficiently (Le Pape et al., <xref ref-type="bibr" rid="B52">2014</xref>). Further, there are more sophisticated approaches to marine spatial planning, for example temporary closures (Brown et al., <xref ref-type="bibr" rid="B9">2015</xref>), and policies directed at specific spatial behaviors, for example bycatch move-on rules (Dunn et al., <xref ref-type="bibr" rid="B16">2014</xref>). Like MPAs, improved understanding of the spatial behavior of fishermen, at fine spatial and temporal resolution, will be critical to advancing these arguably more sophisticated forms of marine spatial planning.</p>
<p>Marine spatial planning extends to other ocean-industries, not just fishing. Indeed, much applied research is currently focused on &#x0201C;cross-sector&#x0201D; marine spatial planning, which aims to develop policies that optimize the (sustainable) use of the oceans by all sectors, for example fishing, aquaculture, shipping, tourism and oil and mineral extraction (Lester et al., <xref ref-type="bibr" rid="B56">2013</xref>; Klinger et al., <xref ref-type="bibr" rid="B51">2017</xref>). Like in the case of marine spatial planning geared solely for fisheries (e.g., MPAs), cross sector spatial policies will depend on a detailed quantification of spatial behavior. Importantly, this advanced understanding will not only improve our ability to design cross-sector policies for optimal/sustainable use of multiple ocean resources, but it will help us anticipate how people (like fishermen) will respond to these new policies (Klein et al., <xref ref-type="bibr" rid="B49">2017</xref>). This is key to developing cross-sector policies that will provide opportunities for (economic) growth in the long-run, as the social and ecological organization of marine systems change (Klinger et al., <xref ref-type="bibr" rid="B50">2018</xref>).</p>
<p>A final consideration for integrating detailed understanding of fishing spatial behavior into marine management is that fishermen typically work in numerous fisheries over a given year (Kasperski and Holland, <xref ref-type="bibr" rid="B48">2013</xref>; Fuller et al., <xref ref-type="bibr" rid="B24">2017</xref>). As a consequence, fishermen will move across, exploit and make money from different parts of a seascape at different parts of the year. Hence, they will have many relationships with different parts of the seascape. For example, a fisherman on the U.S. west coast that works in the albacore tuna fishery may also work in the dungeness crab fishery. As a consequence, high FTLE ocean features will be important to this fisherman during the tuna season, but not when they operate in the crab fishery. This is similar to agriculturalists that grow different crops in different parts of a landscape at different parts of the year. Indeed, just like in agricultural management (Iverson et al., <xref ref-type="bibr" rid="B43">2014</xref>), spatial marine policies will be improved if they acknowledge that fishermen&#x00027;s diverse harvest portfolios connect different parts of seascapes (Hobday et al., <xref ref-type="bibr" rid="B41">2011</xref>).</p>
<p>In summary, coastal management and marine spatial planning that recognizes and accounts for feedbacks between fishermen behavior and the dynamic and structured nature of seascapes is likely to meet with greater compliance and provide for stronger resilience in the face of cumulative anthropogenic impacts. Indeed, flexibility and resilience&#x02014;the ability to cope with change (Folke, <xref ref-type="bibr" rid="B22">2006</xref>)&#x02014;are key properties of coastal human communities that managers are looking to bolster, especially in the context of impending shifts in species ranges expected with climate change (Pinsky et al., <xref ref-type="bibr" rid="B67">2013</xref>). Furthermore, incorporating fine spatial-scale information into management policies is essential if we are to continue to improve the efficiency of fisheries (Hobday et al., <xref ref-type="bibr" rid="B41">2011</xref>). Increased fisheries efficiency would lead to fishermen spending less time at sea, and as a consequence reduced risk of harm. Of course, in the interest of long-term sustainability this increase in efficiency should be matched by changes in governance institutions that prevent over harvest. Ultimately, given the coupled nature of social-ecological systems, integrating high resolution data on physical, chemical, ecological and social factors will improve both how and to what extent we use living natural resources (Wilen, <xref ref-type="bibr" rid="B78">2004</xref>), leading to improved chances of prosperity now and in the future.</p>
</sec>
<sec id="s5">
<title>Author contributions</title>
<p>JW, EF, FC, and JS all contributed data, designed the scientific approach, analyzed the data and wrote the manuscript.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</sec>
</body>
<back>
<ack><p>We would like to thank Frank Davenport, Claudie Beaulieu for their help in preparing this manuscript. We would especially like to thank Brad Stenberg and the Pacific Fisheries Information Network (PacFIN), the Pacific States Marine Fisheries Commission, Kelly Spalding and the VMS Program at the National Marine Fisheries Service&#x00027;s Office of Law Enforcement, the NWFSC Observer Program, and Chris Edwards at UC Santa Cruz for providing the ROMS data. We also thank the Washington, Oregon and California Departments of Fish and Wildlife for sharing their data.</p></ack>
<sec sec-type="supplementary-material" id="s7">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2018.00046/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2018.00046/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Image1.png" id="SM1" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S1</label>
<caption><p>The probability density function of speed from <bold>(A)</bold> tuna, <bold>(B)</bold> salmon, and <bold>(C)</bold> shrimp trips. Empirical distributions are shown in gray, the &#x0201C;best&#x0201D; fitted Gaussian Mixture Models in orange, and the cut-off speeds that are used to segment fishing and non-fishing behaviors is identified by the blue dashed line.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image2.png" id="SM2" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S2</label>
<caption><p>A mock-example of one trip. We are not allowed to show real fishing trajectories due to privacy constraints, so instead we created this mock-up based on a real example. Fishing vessel locations are identified by the colored dots (each separated by 5 min.) and speed (m/s) is identified by color. For this particular trip there are two searching/fishing events, identified by the clusters of slow-speed points. One problem we identified was that the NOAA observer data can sometimes be obviously erroneous. This is explained in the <bold>(Top)</bold>, where the VMS locations circled in gray identify when the NOAA observer recorded that fishing is happening. For the top-most fishing event, there is clearly an overshoot. In contrast, our behavioral segmentation approach <bold>(Bottom)</bold> based on vessel speed is much more conservative.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image3.png" id="SM3" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S3</label>
<caption><p>Observed sea surface temperature provided by the Operational Sea Surface Temperature and Sea Ice Analysis (OSTIA, Donlon et al., 2012). OSTIA uses satellite data provided by the GHRSST project, together with <italic>in-situ</italic> observations to determine the sea surface temperature. The analysis is produced daily at a resolution of 1/20<sup><italic>o</italic></sup> (approximately 5 km).</p></caption></supplementary-material>
<supplementary-material xlink:href="Image4.png" id="SM4" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S4</label>
<caption><p>Observed chlorophyll concentration (Maritorena et al., 2010) for May 23rd 2010, made using Level 3, daily, binned imagery from SeaWiFS, MODIS-Aqua, and Meris.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image5.png" id="SM5" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S5</label>
<caption><p>ROMS 4D-Var posterior estimate of Sea surface temperature (color shading) and surface velocity (vector) for May 23rd 2010. Attracting Lagrangian Coherent Structures (LCSs) are ridges of the Finite-time Lyapunov Exponent (FTLE) field, and are identified by the white lines.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image6.pdf" id="SM6" mimetype="image/pdf" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S6</label>
<caption><p>Probability density function of finite-time Lyapunov values on Jan 1st 2009, for the ROMS US west coast modeled domain.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image7.png" id="SM7" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S7</label>
<caption><p>Fishing intensity (<italic>log</italic><sub>10</sub> fishing days) for the tuna, salmon and shrimp m&#x000E9;tiers, calculated from the VMS data over the period 2009&#x02013;2013.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image8.png" id="SM8" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S8</label>
<caption><p>Statistical analysis produced from the &#x0201C;whole-domain&#x0201D; random rest. <bold>(A)</bold> Bar-plot showing the fraction of fishing (red-tuna, blue-shrimp, gray-salmon) and random (gold) events with a FTLE value greater than or equal to 0.1<italic>d</italic><sup>1</sup>. <italic>G</italic>-test <italic>p</italic>-values are shown below each fishery label. <bold>(B)</bold> The difference in VMS- and random-FTLE survival functions (&#x00394; Surv) for the three fisheries with 95% confidence intervals.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image9.png" id="SM9" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S9</label>
<caption><p>Logarithmic trip landing (<italic>log</italic><sub>10</sub> <italic>lbs</italic>) as a function of the max finite-time Lyapunov exponent experienced while fishing on a given trip, for all <bold>(A)</bold> tuna, <bold>(B)</bold> salmon, and <bold>(C)</bold> shrimp trips. We find a significant linear relationship for tuna fishing trips, indicating that tuna fishermen make more money the more they fish on strong filaments. Both the salmon and shrimp trips show now (significant) relationships. Marker-size is proportional to vessel length.</p></caption></supplementary-material>
<supplementary-material xlink:href="Image10.png" id="SM10" mimetype="image/png" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Figure S10</label>
<caption><p>Logarithmic trip revenue (<italic>log</italic>$) as a function of the expected finite-time Lyapunov exponent (FTLE) experienced while fishing on a particular trip, for all <bold>(A)</bold> tuna, <bold>(B)</bold> salmon, and <bold>(C)</bold> shrimp fisheries. Marker size is proportional to vessel length. We find no significant linear relationships for any of the fisheries studies.</p></caption></supplementary-material>
<supplementary-material xlink:href="Video1.mov" id="SM11" mimetype="video/quicktime" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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<fn fn-type="financial-disclosure"><p><bold>Funding.</bold> JW and EF acknowledge the support of the NSF Dynamics of Coupled Natural-Human Systems grant GEO-1211972 and NSF GRFP: DGE-1148900 respectively.</p>
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