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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2017.00311</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Combined Effects of Experimental Acidification and Eutrophication on Reef Sponge Bioerosion Rates</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Webb</surname> <given-names>Alice E.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/446780/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>van Heuven</surname> <given-names>Steven M. A. C.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>de Bakker</surname> <given-names>Didier M.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/335974/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>van Duyl</surname> <given-names>Fleur C.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/379419/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Reichart</surname> <given-names>Gert-Jan</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>de Nooijer</surname> <given-names>Lennart J.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Ocean Systems, NIOZ Royal Netherlands Institute for Sea Research and Utrecht University</institution>, <addr-line>Texel</addr-line>, <country>Netherlands</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research and Utrecht University</institution>, <addr-line>Texel</addr-line>, <country>Netherlands</country></aff>
<aff id="aff3"><sup>3</sup><institution>Department of Ocean Systems, NIOZ Royal Netherlands Institute for Sea Research</institution>, <addr-line>Texel</addr-line>, <country>Netherlands</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Earth Sciences, Faculty of Geosciences, Utrecht University</institution>, <addr-line>Utrecht</addr-line>, <country>Netherlands</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Hajime Kayanne, The University of Tokyo, Japan</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Max Wisshak, Senckenberg Nature Research Society, Germany; Susana Enr&#x000ED;quez, National Autonomous University of Mexico, Mexico</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Alice E. Webb <email>alice.webb&#x00040;nioz.nl</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Coral Reef Research, a section of the journal Frontiers in Marine Science</p></fn></author-notes>
<pub-date pub-type="epub">
<day>26</day>
<month>09</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>4</volume>
<elocation-id>311</elocation-id>
<history>
<date date-type="received">
<day>06</day>
<month>06</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>12</day>
<month>09</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2017 Webb, van Heuven, de Bakker, van Duyl, Reichart and de Nooijer.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Webb, van Heuven, de Bakker, van Duyl, Reichart and de Nooijer</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p>Health of tropical coral reefs depends largely on the balance between constructive (calcification and cementation) and destructive forces (mechanical-chemical degradation). Gradual increase in dissolved CO<sub>2</sub> and the resulting decrease in carbonate ion concentration (&#x0201C;ocean acidification&#x0201D;) in ocean surface water may tip the balance toward net mass loss for many reefs. Enhanced nutrients and organic loading in surface waters (&#x0201C;eutrophication&#x0201D;), may increase the susceptibility of coral reef and near shore environments to ocean acidification. The impacts of these processes on coral calcification have been repeatedly reported, however the synergetic effects on bioerosion rates by sponges are poorly studied. Erosion by excavating sponges is achieved by a combination of chemical dissolution and mechanical chip removal. In this study, <italic>Cliona caribbaea</italic>, a photosymbiont-bearing excavating sponge widely distributed in Caribbean reef habitats, was exposed to a range of CO<sub>2</sub> concentrations, as well as different eutrophication levels. Total bioerosion rates, estimated from changes in buoyant weights over 1 week, increased significantly with <italic>p</italic>CO<sub>2</sub> but not with eutrophication. Observed chemical bioerosion rates were positively affected by both <italic>p</italic>CO<sub>2</sub> and eutrophication but no interaction was revealed. Net photosynthetic activity was enhanced with rising <italic>p</italic>CO<sub>2</sub> but not with increasing eutrophication levels. These results indicate that an increase in organic matter and nutrient renders sponge bioerosion less dependent on autotrophic products. At low and ambient <italic>p</italic>CO<sub>2</sub>, day-time chemical rates were &#x0007E;50% higher than those observed at night-time. A switch was observed in bioerosion under higher <italic>p</italic>CO<sub>2</sub> levels, with night-time chemical bioerosion rates becoming comparable or even higher than day-time rates. We suggest that the difference in rates between day and night at low and ambient <italic>p</italic>CO<sub>2</sub> indicates that the benefit of acquired energy from photosynthetic activity surpasses the positive effect of increased <italic>p</italic>CO<sub>2</sub> levels at night due to holobiont respiration. This implies that excavation must cost cellular energy, by processes, such as ATP usage for active Ca<sup>2&#x0002B;</sup> and/or active proton pumping. Additionally, competition for dissolved inorganic carbon species may occur between bioerosion and photosynthetic activity by the symbionts. Either way, the observed changing role of symbionts in bioerosion can be attributed to enhanced photosynthetic activity at high <italic>p</italic>CO<sub>2</sub> levels.</p></abstract>
<kwd-group>
<kwd>sponge bioerosion</kwd>
<kwd>ocean acidification</kwd>
<kwd>eutrophication</kwd>
<kwd>coral reef</kwd>
<kwd>diurnal rhythm</kwd>
<kwd>sponge symbionts</kwd>
</kwd-group>
<contract-num rid="cn001">858.14.022</contract-num>
<contract-sponsor id="cn001">Nederlandse Organisatie voor Wetenschappelijk Onderzoek<named-content content-type="fundref-id">10.13039/501100003246</named-content></contract-sponsor>
<counts>
<fig-count count="6"/>
<table-count count="5"/>
<equation-count count="5"/>
<ref-count count="74"/>
<page-count count="15"/>
<word-count count="11220"/>
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</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>The ocean serves as the largest sink of anthropogenic CO<sub>2</sub> on earth after the atmosphere itself. Since the beginning of the industrial revolution, it has taken up &#x0007E;28% of the emitted anthropogenic CO<sub>2</sub> (Le Qu&#x000E9;r&#x000E9; et al., <xref ref-type="bibr" rid="B43">2015</xref>). The cumulative uptake of atmospheric carbon dioxide by the ocean has increased the total marine inorganic carbon concentration, reduced pH and consequently decreased the CaCO<sub>3</sub> saturation state. Together, these effects are termed ocean acidification (OA) and it is predicted that average surface ocean CaCO<sub>3</sub> saturation state will have decreased by 25&#x02013;50% at the end of the current century, depending on the emission scenario (Hoegh-Guldberg et al., <xref ref-type="bibr" rid="B32">2007</xref>; Gattuso and Hansson, <xref ref-type="bibr" rid="B25">2011</xref>; Veron, <xref ref-type="bibr" rid="B67">2011</xref>; Le Qu&#x000E9;r&#x000E9; et al., <xref ref-type="bibr" rid="B42">2013</xref>).</p>
<p>Eutrophication, caused by increasing release of nutrients and organic material in surface waters, represents an additional threat to near-shore and coral reef environments. Recent studies have shown that local anthropogenic disturbances, such as nutrient and organic rich run-offs from agriculture and coastal development, as well as the input of poorly treated waste waters (Gast et al., <xref ref-type="bibr" rid="B24">1999</xref>; Lapointe and Mallin, <xref ref-type="bibr" rid="B41">2011</xref>; Govers et al., <xref ref-type="bibr" rid="B28">2014</xref>) have caused the average <italic>p</italic>CO<sub>2</sub> of coral reefs to increase &#x0007E;3.5-fold faster throughout the globe over the past 20 years compared to the open ocean. This is suggested to be caused by a shift in the metabolic balance of coral reef ecosystems (Cai et al., <xref ref-type="bibr" rid="B3">2011</xref>; Cyronak et al., <xref ref-type="bibr" rid="B7">2014</xref>; Yeakel et al., <xref ref-type="bibr" rid="B73">2015</xref>). Such anthropogenic input also promotes growth of opportunistic organisms, such as sponges, macroalgae, turf algae and/or benthic cyanobacteria (Holmes, <xref ref-type="bibr" rid="B33">2000</xref>; Kuffner and Paul, <xref ref-type="bibr" rid="B40">2001</xref>; Gorgula and Connell, <xref ref-type="bibr" rid="B27">2004</xref>; Vermeij et al., <xref ref-type="bibr" rid="B66">2010</xref>), potentially resulting also in major shifts in benthic community compositions (Hughes, <xref ref-type="bibr" rid="B35">1994</xref>; Bruno et al., <xref ref-type="bibr" rid="B2">2009</xref>; De Bakker et al., <xref ref-type="bibr" rid="B8">2017</xref>).</p>
<p>Reef bioerosion by sponges and other bioeroding organisms (Wisshak and Tapanila, <xref ref-type="bibr" rid="B69">2008</xref>) plays an important role in regulating the carbonate budget of coral reefs (Perry et al., <xref ref-type="bibr" rid="B52">2014</xref>). Although the negative effects of OA on production of CaCO<sub>3</sub> (calcification) by corals are widely documented (Gattuso et al., <xref ref-type="bibr" rid="B26">1998</xref>; Kleypas and Langdon, <xref ref-type="bibr" rid="B39">2006</xref>; Hoegh-Guldberg et al., <xref ref-type="bibr" rid="B32">2007</xref>; Ries et al., <xref ref-type="bibr" rid="B55">2009</xref>; Pandolfi et al., <xref ref-type="bibr" rid="B51">2011</xref>; Dove et al., <xref ref-type="bibr" rid="B12">2013</xref>), its impact on biologically induced carbonate dissolution and mechanical destruction have been understudied (Zundelevich et al., <xref ref-type="bibr" rid="B74">2007</xref>; Fang et al., <xref ref-type="bibr" rid="B17">2013a</xref>; Wisshak et al., <xref ref-type="bibr" rid="B70">2014</xref>; Enochs et al., <xref ref-type="bibr" rid="B15">2015</xref>; Sch&#x000F6;nberg et al., <xref ref-type="bibr" rid="B61">2017</xref>) and has so far not been quantified in combination with eutrophication.</p>
<p>Bioeroding sponges contribute between 60 and 90% of total macroborer activity on coral reefs and their (surface-normalized) erosion rates have been found to equal and even surpass calcification rates of hermatypic corals (MacGeachy and Stearn, <xref ref-type="bibr" rid="B44">1976</xref>; Hudson, <xref ref-type="bibr" rid="B34">1977</xref>; Edinger et al., <xref ref-type="bibr" rid="B14">2000</xref>; Carballo et al., <xref ref-type="bibr" rid="B5">2008</xref>; Perry et al., <xref ref-type="bibr" rid="B52">2014</xref>). Bioeroding sponges use a combination of chemical dissolution and mechanical CaCO<sub>3</sub> chip removal to erode coral substrate (Nasonov, <xref ref-type="bibr" rid="B49">1924</xref>; R&#x000FC;tzler and Rieger, <xref ref-type="bibr" rid="B56">1973</xref>; Pomponi, <xref ref-type="bibr" rid="B53">1980</xref>). It is hypothesized that specialized cells of the bioeroding sponges are able to lower the pH at selected sites to promote controlled aragonite dissolution, thereby creating cavities in which the sponge grows. The mechanisms by which sponges dissolve carbonate has however remained elusive since this etching interface is not directly accessible. Several of the most competitive bioeroding sponges harbor endosymbiotic dinoflagellate zooxanthellae and this symbiosis has been shown to enhance bioerosion in light (Hill, <xref ref-type="bibr" rid="B30">1996</xref>; Fang et al., <xref ref-type="bibr" rid="B18">2016</xref>). This raises the question further as to how symbionts enhance bioerosion. Geochemically, this is paradoxical because the autotrophic symbionts would tend to increase pH and enhance carbonate precipitation rather than dissolution (Garcia-Pichel et al., <xref ref-type="bibr" rid="B23">2010</xref>).</p>
<p>If the chemical composition of the fluid at these sites is related to that of seawater, a reduction in ambient saturation state may lower energetic costs for the sponge to create a micro-environment that is undersaturated for CaCO<sub>3</sub>, in which the aragonite skeleton may subsequently dissolve and chips are dislodged. Sch&#x000F6;nberg (<xref ref-type="bibr" rid="B60">2008</xref>) provided a first glimpse of a pH gradient toward the etching sites using micro-sensors which may indicate that sponges do indeed alter the chemistry at the site of bioerosion. Although the underlying physiological and mechanical processes employed by the sponges to erode are currently unknown, a number of studies have shown that an increase in <italic>p</italic>CO<sub>2</sub> of the ambient water results in increased bioerosion rates (Wisshak et al., <xref ref-type="bibr" rid="B72">2012</xref>, <xref ref-type="bibr" rid="B71">2013</xref>; Duckworth and Peterson, <xref ref-type="bibr" rid="B13">2013</xref>; Fang et al., <xref ref-type="bibr" rid="B17">2013a</xref>), suggesting that changes in seawater chemistry directly affect the saturation state at the site where the coral aragonite is dissolved.</p>
<p>Since eutrophication may increase effects of OA in coastal waters, we here assess the potential combined effects on bioerosion rates (both chemical and mechanical) of the sponge <italic>Cliona caribbaea</italic> Carter, 1882. <italic>C. caribbaea</italic> is found abundantly in the Caribbean and is a representative of the &#x0201C;<italic>Cliona viridis</italic> species complex,&#x0201D; including clionaids that form a symbiosis with the dinoflagellates of the genus Symbiodinium (Sch&#x000F6;nberg, <xref ref-type="bibr" rid="B57">2000</xref>). These photosynthetic symbionts (zooxanthellae) provide sponges with a significant fraction of their carbon and energy via photosynthesis (Weisz et al., <xref ref-type="bibr" rid="B68">2010</xref>; Fang et al., <xref ref-type="bibr" rid="B20">2014</xref>). Since this affects diurnal patterns in the holobiont metabolism (Freeman and Thacker, <xref ref-type="bibr" rid="B21">2011</xref>), bioerosion rates by <italic>C. caribbaea</italic> were determined at day and night.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title>Sample collection</title>
<p>In December 2015, samples containing the bioeroding sponge <italic>Cliona caribbaea</italic> were retrieved from dead coral substrate (<italic>Diploria</italic> spp.), found at a water depth between 3 and 5 m (<italic>S</italic> &#x0003D; 34 and <italic>T</italic> &#x0003D; 28&#x000B0;C) at the leeward side of the island of St. Eustatius, Caribbean Netherlands (17.4890&#x000B0; N, 62.9736&#x000B0; W). Annual mean seawater temperature is 27.6&#x000B0;C, varying between 26.1&#x000B0;C in Feb-Mar and 28.2&#x000B0;C in Sept-Oct. Samples were collected using an air drill and hole saw (inner diameter: 40 mm) and transported submerged in ambient SW to an on-shore CO<sub>2</sub>-controlled experimental set-up. The sponge-infested cores were placed in large flow-through tanks (50 L) for 1 week to allow them to recover from collection and transport. Samples of coral skeleton without bioeroding sponges served as control substrate for the incubations. Collected cores were brushed delicately with a soft brush to remove any non-sponge organisms. The experiment lasted 1 week from December 23 to December 30 2015, excluding acclimatization to the various <italic>p</italic>CO<sub>2</sub> scenarios, which was performed gradually over 6 days from the December 17 to December 22. Each core was photographed at the start (before acclimatization) and at the end of the experiment to assess physical variations throughout the experiment. In addition, fluorescein was released near the ostia half way through the experiment to make sure sponges were still filtering.</p>
</sec>
<sec>
<title>Experimental setup</title>
<p>Sand-filtered nearshore seawater was continuously supplied to four 200-L barrels in which the <italic>p</italic>CO<sub>2</sub> of the water was maintained at four different levels. Water from each of the four barrels was continuously pumped into nine aquaria of 12 L each, resulting in a total of 36 aquaria distributed across three tables (A, B, and C). Three different levels of dissolved organic and inorganic matter concentrations were maintained in three sets of three aquaria within each <italic>p</italic>CO<sub>2</sub> scenario (Figure <xref ref-type="fig" rid="F1">1</xref>). All aquaria received an irradiance at levels and spectral quality similar to in-situ conditions, as provided by sunlight passing through Marine Blue filters (&#x00023;131; Lee filters), and neutral density shading cloth. The aquaria were placed in a 5 cm high flow-through bath of seawater to minimize temperature fluctuations.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Experimental setup consisting of four large barrels in which the <italic>p</italic>CO<sub>2</sub> (4 levels) is manipulated and controlled through a central CO<sub>2</sub> sensor. From every barrel, water is pumped into 9 aquaria (12 L each). Of these 9, two groups of 3 aquaria were supplied with additional dissolved organic carbon (E1: green, E2: blue, E3: black) using peristaltic pumps. Pumps ran at different speed between E2 and E3 to deliver different concentration of RPMI. Each of the 36 aquaria contained 2 sponge bearing coral cores (brown squares) and 24 aquaria contained control cores (white squares).</p></caption>
<graphic xlink:href="fmars-04-00311-g0001.tif"/>
</fig>
<p>Carbonate chemistry of the water in the four barrels was manipulated using a feedback control system developed in-house, consisting of a central xCO<sub>2</sub> sensor (LICOR Inc. model LI-7000), CO<sub>2</sub> injectors, CO<sub>2</sub> scrubbers and a control computer. In each barrel, water was adjusted to desired <italic>p</italic>CO<sub>2</sub> concentration via air perturbation continuously pumped at high flow (&#x0007E;25 l/min) through a sparger located at the bottom of the barrel to ensure rapid air-sea <italic>p</italic>CO<sub>2</sub> equilibration. Air from the four treatment barrels was sequentially sampled and analyzed for xCO<sub>2</sub>. Measurements of xCO<sub>2</sub> (in ppm) were converted to <italic>p</italic>CO<sub>2</sub> (in &#x003BC;atm) by accounting for average hydrostatic pressure after bubble injection, water temperature and salinity and the humidity of the measurement gas stream following Dickson et al. (<xref ref-type="bibr" rid="B11">2007</xref>). Additionally, a zero-standard and ambient air were regularly measured to allow approximate drift-free operation. The measured <italic>p</italic>CO<sub>2</sub> levels were compared by a central computer system to set points and adjusted by either (i) injecting small amount of pure CO<sub>2</sub> into the circulated headspace air or (ii) recirculating the air through large soda lime-filled CO<sub>2</sub> cartridges to remove CO<sub>2</sub>. The system allowed treatment and delivery of &#x0007E;50 liters of water per hour. The four treatments included a pre-industrial scenario (PI; 280 &#x003BC;atm), a present-day scenario (PD; 410 &#x003BC;atm), and two concentrations based on scenarios for potential future atmospheres predicted for 2100 (Solomon, <xref ref-type="bibr" rid="B63">2007</xref>): one based on a &#x02018;reduced&#x02019; CO<sub>2</sub> emission scenario (RE; 750 &#x003BC;atm) and one based on a &#x02018;business-as-usual&#x02019; CO<sub>2</sub> emission scenario (BU; 1050 &#x003BC;atm). Reported <italic>p</italic>CO<sub>2</sub> is valid for the culturing temperature (i.e., slightly cooler than the treatment barrels), and estimated to be accurate to within 10 &#x003BC;atm.</p>
<p>Different amounts of dissolved organic and inorganic material were supplied from stock solutions by two 12-channel peristaltic pumps. Roswell Park Memorial Institute (RPMI) 1640 medium was used as the eutrophication supplement. RPMI is a well-known culture medium and it has been used as a growth enhancer on <italic>C. crambe</italic> sponge explants (Camacho et al., <xref ref-type="bibr" rid="B4">2006</xref>). It contains sugars, inorganic salts, amino acids and vitamins and was used to simulate different levels of eutrophication in the aquaria.</p>
<p>The experiment aimed to provide multiples (1x, 2x, 3x) of the natural near-shore labile DOC concentrations. Labile DOC represents the portion of the total DOC pool on which sponges can feed, here &#x0007E;20% of &#x0007E;80 &#x003BC;molC/kg (Van Duyl and Gast, <xref ref-type="bibr" rid="B65">2001</xref>; De Goeij and Van Duyl, <xref ref-type="bibr" rid="B9">2007</xref>). Treatments were E1: control labile DOC conditions (i.e., only &#x0007E;16 &#x003BC;mol/kg natural labile DOC), E2: double labile DOC conditions (natural DOC &#x0002B; 16 &#x003BC;mol/kg DOC as RPMI1640) and E3: triple labile DOC conditions (natural &#x0002B; 32 &#x003BC;mol/kg RPMI 1640).</p>
<p>In total, 72 sponge-bearing cores and 24 control cores were collected and distributed evenly over the 12 scenarios, resulting in 2 sponge-bearing cores per aquarium and 2 control cores per scenario. Cores from increased-<italic>p</italic>CO<sub>2</sub> scenarios were exposed to gradually increasing <italic>p</italic>CO<sub>2</sub> over 1 week, ending with the desired <italic>p</italic>CO<sub>2</sub> for that treatment. Addition of RPMI started as scenarios reached their desired <italic>p</italic>CO<sub>2</sub> concentration. Subsequently, sponges were left to acclimatize to their respective carbon dioxide and eutrophication levels for a week prior to the incubations. Cores were placed in closed 0.5 L polycarbonate incubators with inbuilt stirrers in their respective aquaria to keep at constant temperature. Each incubation contained two cores and lasted 6 h to determine chemical bioerosion rates (see Assessment of Bioerosion Rates). The optimum incubation time was determined through trials of 2, 4, 6, and 8 h. Although 6 h was considered the best fit to capture the alkalinity gradient caused by chemical bioerosion, it must be noted that sponges placed in 0.5 L of standing water for more than 1 h would experience lack of food and reduced amounts of oxygen (especially at night) over time. At the end of each incubation, cores were returned to their aquaria.</p>
</sec>
<sec>
<title>Data collection</title>
<p>Temperature and irradiance of the water in the aquaria were recorded every 10 min by 6 HOBO&#x000AE; Pendant UA-002-64 light and temperature loggers and 2 calibrated Odyssey PAR sensors (Dataflow Systems, X, Y), respectively. Salinity was recorded daily in each aquarium using a salinometer (VWR CO310). Oxygen was recorded using a PreSens O<sub>2</sub> sensor (Fibox 4, PSt3) after each incubation. Throughout the experiment, every other day around noon, water samples were taken from each treatment to monitor carbonate chemistry, DOC and nutrients. Samples for alkalinity (A<sub>T</sub>) and dissolved inorganic carbon (DIC) were collected into 250 ml borosilicate bottles and poisoned with 50% saturated HgCl<sub>2</sub> solution (final concentration 0.02 %) to arrest biological activity. DOC samples (30 ml) were collected in pre-combusted (550&#x000B0;C) glass vials and acidified with 10 drops of concentrated HCl (37%). Both A<sub>T</sub> and DIC were measured on a Versatile Instrument for the Determination of Titration Alkalinity (VINDTA) model 3C (Marianda GmbH, Kiel, Germany). Determination of A<sub>T</sub> was by &#x0201C;open cell&#x0201D; potentiometric acid titration (Mintrop et al., <xref ref-type="bibr" rid="B47">2000</xref>; Dickson et al., <xref ref-type="bibr" rid="B11">2007</xref>) and DIC was measured coulometrically (Johnson et al., <xref ref-type="bibr" rid="B38">1993</xref>; Dickson et al., <xref ref-type="bibr" rid="B11">2007</xref>). Prevention of drift and a high accuracy for A<sub>T</sub> and DIC were attained by analysis of certified reference material (CRM; supplied by Dr. A. Dickson, Scripps Institution of Oceanography) after every &#x0007E;20 samples. The full carbonate system state was calculated from the measured temperature, salinity, A<sub>T</sub> and DIC using the Seacarb package (R-3.2.0) and using the dissociations constants preferred by Dickson and Millero (<xref ref-type="bibr" rid="B10">1987</xref>). Samples for determination of nitrate &#x0002B; nitrite, nitrite, phosphate and ammonium were filtered upon collection and stored frozen. Analyses for nutrients were carried out on a QuAAtro continuous flow analyzer (SEAL Analytical, GmbH, Norderstedt, Germany) following GO-SHIP protocol (Hydes et al., <xref ref-type="bibr" rid="B36">2010</xref>). DOC analyses were performed with a total carbon analyzer (TOC-VPN, Shimadzu Corp., Kyoto, Japan).</p>
</sec>
<sec>
<title>Assessment of net respiration and photosynthesis rates</title>
<p>Observed changes in DIC and A<sub>T</sub> are governed by the combination of respiration and carbonate dissolution and the associated reverse processes of photosynthesis and calcification. The individual contributions of respiration and carbonate dissolution can be disentangled by empirically adjusting observed &#x00394; A<sub>T</sub> for nutrient effects using the measured nutrient concentration buildup. Indeed, in the case of incubation experiments, all of the change in nutrient concentrations must originate from processes within the incubation chamber. Therefore, this method will result in an appropriate estimate of respiration/dissolution, making calculated bioerosion rates insensitive to errors in measured DIC. Additionally, it takes into account the effect of release of NH4<sup>&#x0002B;</sup> on measured A<sub>T</sub>, which the vector deconvolution does not and cannot, due to the variable release stoichiometry of NH4<sup>&#x0002B;</sup>. Calculations were carried out as follow:</p>
<p>Pretreatment:</p>
<disp-formula id="E1"><mml:math id="M1"><mml:mtable columnalign='left'><mml:mtr><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext><mml:mrow><mml:mtext>nutsreleasecorrected</mml:mtext></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext><mml:mrow><mml:mtext>obs</mml:mtext></mml:mrow></mml:msubsup><mml:mo>&#x0002B;</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msub><mml:mtext>PO</mml:mtext><mml:mn>4</mml:mn></mml:msub><mml:mo>&#x0002B;</mml:mo><mml:mi>&#x00394;</mml:mi><mml:mo stretchy='false'>(</mml:mo><mml:msub><mml:mtext>NO</mml:mtext><mml:mn>3</mml:mn></mml:msub><mml:mo>&#x0002B;</mml:mo><mml:msub><mml:mtext>NO</mml:mtext><mml:mn>2</mml:mn></mml:msub><mml:mo stretchy='false'>)</mml:mo><mml:mo>&#x02212;</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msub><mml:mtext>NH</mml:mtext><mml:mn>4</mml:mn></mml:msub></mml:mtr></mml:mtable></mml:math></disp-formula>
<p>Relationships:</p>
<disp-formula id="E2"><mml:math id="M2"><mml:mtable columnalign='left'><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext><mml:mrow><mml:mtext>nutsreleasecorrected</mml:mtext></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:msup><mml:mn>2</mml:mn><mml:mo>&#x02217;</mml:mo></mml:msup><mml:mtext>diss</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msup><mml:mtext>DIC</mml:mtext><mml:mrow><mml:mtext>obs</mml:mtext></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mn>1</mml:mn><mml:mo>&#x02217;</mml:mo></mml:msup><mml:mtext>diss</mml:mtext><mml:mo>&#x0002B;</mml:mo><mml:msup><mml:mn>1</mml:mn><mml:mo>&#x02217;</mml:mo></mml:msup><mml:mtext>resp</mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
<disp-formula id="E3"><mml:math id="M3"><mml:mtable columnalign='left'><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext><mml:mrow><mml:mtext>resp</mml:mtext></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:mn>0</mml:mn><mml:mtext>&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;change&#x000A0;&#x000A0;in&#x000A0;&#x000A0;</mml:mtext><mml:msub><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mtext>&#x000A0;&#x000A0;due&#x000A0;&#x000A0;to&#x000A0;&#x000A0;respiration</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext><mml:mrow><mml:mtext>diss</mml:mtext></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mi>A</mml:mi><mml:mtext>T</mml:mtext><mml:mrow><mml:mi>o</mml:mi><mml:mi>b</mml:mi><mml:mi>s</mml:mi></mml:mrow></mml:msubsup><mml:mtext>&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;change&#x000A0;&#x000A0;in&#x000A0;&#x000A0;</mml:mtext><mml:msub><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mtext>&#x000A0;&#x000A0;due&#x000A0;&#x000A0;to&#x000A0;&#x000A0;dissolution</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msup><mml:mtext>DIC</mml:mtext><mml:mrow><mml:mtext>resp</mml:mtext></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:mo stretchy='false'>(</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msup><mml:mtext>DIC</mml:mtext><mml:mrow><mml:mi>o</mml:mi><mml:mi>b</mml:mi><mml:mi>s</mml:mi></mml:mrow></mml:msup><mml:mo>&#x02212;</mml:mo><mml:msup><mml:mtext>DIC</mml:mtext><mml:mrow><mml:mtext>diss</mml:mtext></mml:mrow></mml:msup><mml:mo stretchy='false'>)</mml:mo><mml:mtext>&#x000A0;change&#x000A0;&#x000A0;in&#x000A0;&#x000A0;DIC&#x000A0;&#x000A0;due&#x000A0;&#x000A0;to&#x000A0;&#x000A0;respiration</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msup><mml:mtext>DIC</mml:mtext><mml:mrow><mml:mtext>diss</mml:mtext></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msubsup><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext><mml:mrow><mml:mi>o</mml:mi><mml:mi>b</mml:mi><mml:mi>s</mml:mi></mml:mrow></mml:msubsup><mml:mo>/</mml:mo><mml:msup><mml:mtext>DIC</mml:mtext><mml:mrow><mml:mtext>diss</mml:mtext></mml:mrow></mml:msup><mml:mtext>&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;&#x000A0;change&#x000A0;&#x000A0;in&#x000A0;&#x000A0;DIC&#x000A0;&#x000A0;due&#x000A0;&#x000A0;to&#x000A0;&#x000A0;dissolution</mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
<p>&#x00394;DIC<sup>resp</sup> was then converted into respiration rates which were used to estimate approximately gross photosynthesis rates as follow:</p>
<disp-formula id="E4"><mml:math id="M4"><mml:mtable columnalign='left'><mml:mtr><mml:msub><mml:mtext>P</mml:mtext><mml:mrow><mml:mtext>gross</mml:mtext></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mtext>Dark&#x000A0;&#x000A0;</mml:mtext><mml:msub><mml:mtext>Resp</mml:mtext><mml:mrow><mml:mtext>net</mml:mtext></mml:mrow></mml:msub><mml:mo>&#x02212;</mml:mo><mml:mtext>Day&#x000A0;&#x000A0;</mml:mtext><mml:msub><mml:mtext>Resp</mml:mtext><mml:mrow><mml:mtext>net</mml:mtext></mml:mrow></mml:msub></mml:mtr></mml:mtable></mml:math></disp-formula>
<p>This method assumes that sponge host respiration is constant during day and night and that symbionts produce 1 mole of O<sub>2</sub> for every mole of CO<sub>2</sub> they fix.</p>
</sec>
<sec>
<title>Assessment of bioerosion rates</title>
<p>Total, chemical and mechanical bioerosion rates were quantified. Total bioerosion refers to the sum of both mechanical and chemical bioerosion.</p>
<p>We expressed chemical and mechanical rates both in mg cm<sup>&#x02212;2</sup> h<sup>&#x02212;1</sup> (to distinguish rates between day and night) and in mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup> (sum of day and night rates). Total bioerosion was expressed in mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup> using both buoyant weight results and the sum of day and night results for chemical and mechanical bioerosion.</p>
<sec>
<title>Chemical bioerosion</title>
<p>Chemical bioerosion was determined using the alkalinity anomaly technique (Smith and Key, <xref ref-type="bibr" rid="B62">1975</xref>; Chisholm and Gattuso, <xref ref-type="bibr" rid="B6">1991</xref>) involving measured changes in A<sub>T</sub> (&#x003BC;mol kg<sup>&#x02212;1</sup>) associated with dissolution in seawater during 6 h incubation periods and correcting for changes in the concentrations of ammonium, nitrate and phosphate (Jacques and Pilson, <xref ref-type="bibr" rid="B37">1980</xref>; Wisshak et al., <xref ref-type="bibr" rid="B71">2013</xref>). The amount of mass of dissolved calcium carbonate [&#x00394;<italic>M</italic><sub>(CaCO3)</sub>, in &#x003BC;g] was calculated using Equation (1) (Zundelevich et al., <xref ref-type="bibr" rid="B74">2007</xref>; Nava and Carballo, <xref ref-type="bibr" rid="B50">2008</xref>):</p>
<disp-formula id="E5"><label>(1)</label><mml:math id="M5"><mml:mtable columnalign='left'><mml:mtr><mml:mtd><mml:mi>&#x00394;</mml:mi><mml:msub><mml:mi>M</mml:mi><mml:mrow><mml:mo stretchy='false'>(</mml:mo><mml:mtext>CaCO</mml:mtext><mml:mn>3</mml:mn><mml:mo stretchy='false'>)</mml:mo></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn>0</mml:mn><mml:mo>.</mml:mo><mml:mn>5</mml:mn><mml:mtext>&#x02009;</mml:mtext><mml:mo stretchy='false'>(</mml:mo><mml:msup><mml:mtext>mol&#x000A0;eq</mml:mtext><mml:mrow><mml:mo>&#x02212;</mml:mo><mml:mn>1</mml:mn></mml:mrow></mml:msup><mml:mo stretchy='false'>)</mml:mo><mml:mo>&#x000D7;</mml:mo><mml:mo stretchy='false'>[</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msub><mml:mtext>A</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo>&#x0002B;</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msub><mml:mtext>PO</mml:mtext><mml:mn>4</mml:mn></mml:msub><mml:mo>&#x02212;</mml:mo><mml:mi>&#x00394;</mml:mi><mml:msub><mml:mtext>NH</mml:mtext><mml:mn>4</mml:mn></mml:msub></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mo>&#x0002B;</mml:mo><mml:mi>&#x00394;</mml:mi><mml:mo stretchy='false'>(</mml:mo><mml:msub><mml:mtext>NO</mml:mtext><mml:mn>3</mml:mn></mml:msub><mml:mo>&#x0002B;</mml:mo><mml:msub><mml:mtext>NO</mml:mtext><mml:mn>2</mml:mn></mml:msub><mml:mo stretchy='false'>)</mml:mo><mml:mo stretchy='false'>]</mml:mo><mml:mo>&#x000D7;</mml:mo><mml:msub><mml:mtext>V</mml:mtext><mml:mrow><mml:mtext>SW</mml:mtext></mml:mrow></mml:msub><mml:mo>&#x000D7;</mml:mo><mml:msub><mml:mi>&#x003C1;</mml:mi><mml:mrow><mml:mtext>SW</mml:mtext></mml:mrow></mml:msub><mml:mo>&#x000D7;</mml:mo><mml:mn>100</mml:mn></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
<p>Where &#x00394; A<sub>T</sub> is the increase in A<sub>T</sub> over the incubation period associated with dissolution, V<sub>SW</sub> is the volume (l) of seawater in the incubation chamber and &#x003C1;<sub>SW</sub> is local seawater density (1.022 kg L<sup>&#x02212;1</sup>). The multiplication factor &#x0201C;100&#x0201D; represents the molecular mass of CaCO<sub>3</sub>.</p>
<p>The 6 h incubations were carried out during both the day and at night, starting either 2 h after sunrise and 1 h after sunset, respectively. Subsamples were used for determination of A<sub>T</sub> and DIC (250 ml, single sample), DOC (30 ml) and nutrient (5 ml) analysis from each chamber at the start and end of each incubation.</p>
<p>Bioerosion rates are commonly expressed as mass of removed substrate per unit surface area of the removing organism per unit time. Rates were therefore converted to mg cm<sup>&#x02212;2</sup> h<sup>&#x02212;1</sup> by expressing the change in A<sub>T</sub> per surface area of the sponge. Two surface areas of the sponge-bearing cores were determined, the upper circle and the healed surface around the sides of the core.</p>
</sec>
<sec>
<title>Mechanical bioerosion</title>
<p>Mechanical bioerosion was estimated by quantifying the CaCO<sub>3</sub> sediment produced by <italic>C. caribbaea</italic> during 6 h incubations using the method described in Fang et al. (<xref ref-type="bibr" rid="B19">2013b</xref>). All remaining incubation chamber seawater (&#x0007E;150 ml) &#x0002B; sediment was collected and the chamber was rinsed with 100 ml water to retrieve any remaining chips. The water was then sieved over a 150 &#x003BC;m mesh to remove non-chip material and then filtered through a precombusted (550&#x000B0;C, 3 h) and pre-weighed GF/F glass microfiber filter (0.7 &#x003BC;m; Whatman). Filters were then combusted at 550&#x000B0;C for 3 h to remove any organic matter and re-weighed to determine the difference in weight and hence that of the sediment produced.</p>
</sec>
<sec>
<title>Total bioerosion</title>
<p>Total bioerosion (both mechanical and chemical) was estimated by the change in buoyant weight of the cores over the week of exposure to different <italic>p</italic>CO<sub>2</sub> and eutrophication scenarios (Fang et al., <xref ref-type="bibr" rid="B19">2013b</xref>). This method assumes organic components of the sponge to have a density equal to that of the ambient seawater (i.e., growth of the sponge will not change buoyant weight of the core). Both sponge cores and control cores were buoyant weighed using electronic scales with 0.1 mg accuracy before and after the week&#x00027;s exposure to the various <italic>p</italic>CO<sub>2</sub> levels. The buoyant mass change of the cores was calibrated for seawater density and corrected by the change in buoyant weight of the control cores, which integrated possible dissolution by other bioeroders, abrasion caused to handling process and accretion due to the potential presence of calcifying organisms.</p>
</sec>
</sec>
<sec>
<title>Statistical analysis</title>
<p>All statistical analysis were performed using the programming environment R 3.3.2 (R Core Team, <xref ref-type="bibr" rid="B54">2013</xref>). Dependent variables acquired from incubation experiments were analyzed by means of an analysis of covariance (ANCOVA) with two categorical factors (Eutrophication, day/night) including three (E1, E2, and E3) and two (day and night) levels, respectively and one continuous covariate (<italic>p</italic>CO<sub>2</sub>). Total bioerosion rates acquired from buoyant weight measurements and net photosynthesis rates were analyzed by means of a 4 &#x000D7; 3 crossed analysis of variance (ANOVA) with two categorical factors (<italic>p</italic>CO<sub>2</sub>, eutrophication) including four (BA, PR, RS, and BU) and three (E1, E2, and E3) levels, respectively.</p>
<p>Normality and homoscedacity were confirmed using the Shapiro-Wilk and Levene&#x00027;s test, respectively. If no significant two-way interactions were revealed, main effects were reported. In the case of significant interactive effects, <italic>Post hoc</italic> tests (Tukey HSD with Bonferroni correction) were applied to determine the effect of a factor at each level of the other.</p>
<p>In addition, linear regression models were performed, after confirming assumptions for residual normality and homoscedacity, between <italic>p</italic>CO<sub>2</sub> (now as a continuous predictor variable) and chemical bioerosion rates for each eutrophication and time levels.</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec>
<title>Health</title>
<p>The sponge tissue damaged due to coring healed during the recovery session and started growing along the upper sides of the core throughout the experiment which indicated that sponges were healthy and recovering. Sponge color from the start to the end only varied very slightly, sponges in every treatment became a bit darker which may indicate a higher chlorophyll-a content in symbionts or an increase in symbiont abundance. Fluorescein injections revealed that sponges were still filtering half way through experiment.</p>
</sec>
<sec>
<title>Seawater variables</title>
<p>Over the course of the experiment, headspace <italic>p</italic>CO<sub>2</sub> in the four barrels remained sufficiently constant to warrant distinction between treatments (Figure <xref ref-type="fig" rid="F2">2</xref>, Table <xref ref-type="table" rid="T1">1</xref>). Calculated mean <italic>p</italic>CO<sub>2</sub> values in the experimental aquaria were 362.5, 443.8, 755.9, and 1046.0 &#x003BC;atm under PI, PD, RE, and BU. The <italic>p</italic>CO<sub>2</sub> levels in PI were on average 82.5 &#x003BC;atm higher than the intended pre-industrial <italic>p</italic>CO<sub>2</sub> levels. However, they remained significantly different from the present scenario and therefore the pre-industrial scenario will be termed &#x0201C;Below-ambient&#x0201D; (BA) in the following text. Sponge cores were exposed to natural variations in temperature and light which, however, proved to be minimal over the experimental period. The average experimental temperature was 27.63&#x000B0;C (min &#x0003D; 25.81&#x000B0;C and max &#x0003D; 29.75&#x000B0;C) and the average light intensity registered inside the aquaria around midday was 562 &#x000B1; 125.0 &#x003BC;mol photons m<sup>&#x02212;2</sup> s<sup>&#x02212;1</sup>. Measured DIC and hence all calculated carbonate system parameters were found to vary significantly across the four OA scenarios (Table <xref ref-type="table" rid="T1">1</xref>) and dissolved organic carbon (DOC), ammonium (NH4), and phosphate (PO<sub>4</sub>) concentrations were found to increase significantly across the eutrophication treatments (Table <xref ref-type="table" rid="T2">2</xref>, Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">S1</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Temporal variability from December 23 to December 30 2015 of continuously monitored <italic>p</italic>CO<sub>2</sub> (a), temperature monitored in the barrels used for setting the <italic>p</italic>CO<sub>2</sub> experiments (b), temperature measured directly in aquaria from table A, B, and C (c) and light throughout the 1 week experiment.</p></caption>
<graphic xlink:href="fmars-04-00311-g0002.tif"/>
</fig>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Seawater physical and carbonate chemistry parameters at the start (T<sub>0</sub>) and the end (T<sub>6</sub>) of incubation experiments, averaged (&#x000B1;standard deviation) over all incubations for each pCO<sub>2</sub> scenario.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th valign="top" align="center"><bold>BA</bold></th>
<th valign="top" align="center" colspan="2"><bold>PD</bold></th>
<th valign="top" align="center"><bold>RE</bold></th>
<th valign="top" align="center"><bold>BU</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">T<sub>barrel</sub> [&#x000B0;C]</td>
<td valign="top" align="center">27.33 &#x000B1; 0.48</td>
<td valign="top" align="center" colspan="2">27.33 &#x000B1; 0.48</td>
<td valign="top" align="center">27.33 &#x000B1; 0.48</td>
<td valign="top" align="center">27.33 &#x000B1; 0.48</td>
</tr>
<tr>
<td valign="top" align="left">T<sub>aquaria</sub> [&#x000B0;C]</td>
<td valign="top" align="center">27.69 &#x000B1; 0.02</td>
<td valign="top" align="center" colspan="2">27.52 &#x000B1; 0.02</td>
<td valign="top" align="center">27.61 &#x000B1; 0.03</td>
<td valign="top" align="center">27.71 &#x000B1; 0.02</td>
</tr>
<tr>
<td valign="top" align="left">Salinity</td>
<td valign="top" align="center">34.1 &#x000B1; 0.2</td>
<td valign="top" align="center" colspan="2">34.1 &#x000B1; 0.2</td>
<td valign="top" align="center">34.1 &#x000B1; 0.2</td>
<td valign="top" align="center">34.1 &#x000B1; 0.2</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic><inline-formula><mml:math id="M8"><mml:msubsup><mml:mrow><mml:mtext>CO</mml:mtext></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow><mml:mrow><mml:mtext>meas</mml:mtext></mml:mrow></mml:msubsup></mml:math></inline-formula> [&#x003BC;atm]<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="center">361.32 &#x000B1; 18.2</td>
<td valign="top" align="center" colspan="2">436.61 &#x000B1; 74.60</td>
<td valign="top" align="center">754.40 &#x000B1; 55.80</td>
<td valign="top" align="center">1081.37 &#x000B1; 60.18</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">%O<sub>2</sub></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">21.1 &#x000B1; 1.0</td>
<td valign="top" align="center">21.5 &#x000B1; 1.1</td>
<td valign="top" align="center">21.3 &#x000B1; 1.1</td>
<td valign="top" align="center">21.0 &#x000B1; 0.9</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">10.1 &#x000B1; 6.4</td>
<td valign="top" align="center">10.5 &#x000B1; 6.8</td>
<td valign="top" align="center">11.2 &#x000B1; 7.9</td>
<td valign="top" align="center">12.1 &#x000B1; 9.3</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">A<sub>T</sub> [&#x003BC;mol kg<sup>&#x02212;1</sup>]</td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">2326.01 &#x000B1; 13.69</td>
<td valign="top" align="center">2323.91 &#x000B1; 29.88</td>
<td valign="top" align="center">2328.94 &#x000B1; 7.78</td>
<td valign="top" align="center">2323.74 &#x000B1; 15.15</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">2365.72 &#x000B1; 34.35</td>
<td valign="top" align="center">2366.12 &#x000B1; 26.67</td>
<td valign="top" align="center">2679.18 &#x000B1; 11.49</td>
<td valign="top" align="center">2418.02 &#x000B1; 15.40</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">DIC [&#x003BC;mol kg<sup>&#x02212;1</sup>]<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">1979.17 &#x000B1; 44.13</td>
<td valign="top" align="center">2018.88 &#x000B1; 34.68</td>
<td valign="top" align="center">2129.06 &#x000B1; 32.46</td>
<td valign="top" align="center">2176.57 &#x000B1; 33.91</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">2075.53 &#x000B1; 51.40</td>
<td valign="top" align="center">2099.46 &#x000B1; 50.66</td>
<td valign="top" align="center">2264.39 &#x000B1; 37.47</td>
<td valign="top" align="center">2337.77 &#x000B1; 48.80</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left"><italic>p</italic><inline-formula><mml:math id="M9"><mml:msubsup><mml:mrow><mml:mtext>CO</mml:mtext></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow><mml:mrow><mml:mtext>meas</mml:mtext></mml:mrow></mml:msubsup></mml:math></inline-formula> [&#x003BC;atm]<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">362.51 &#x000B1; 72.94</td>
<td valign="top" align="center">443.82 &#x000B1; 110.20</td>
<td valign="top" align="center">755.87 &#x000B1; 149.43</td>
<td valign="top" align="center">1046.02 &#x000B1; 270.69</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">490.49 &#x000B1; 105.19</td>
<td valign="top" align="center">559.18 &#x000B1; 132.49</td>
<td valign="top" align="center">1313.25 &#x000B1; 285.40</td>
<td valign="top" align="center">1640.54 &#x000B1; 335.66</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">pH<sup>calc</sup> (total scale) <xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">8.1 &#x000B1; 0.07</td>
<td valign="top" align="center">8.0 &#x000B1; 0.08</td>
<td valign="top" align="center">7.8 &#x000B1; 0.07</td>
<td valign="top" align="center">7.69 &#x000B1; 0.10</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">7.98 &#x000B1; 0.07</td>
<td valign="top" align="center">7.93 &#x000B1; 0.09</td>
<td valign="top" align="center">7.61 &#x000B1; 0.09</td>
<td valign="top" align="center">7.52 &#x000B1; 0.10</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left"><inline-formula><mml:math id="M10"><mml:msubsup><mml:mrow><mml:mtext>HCO</mml:mtext></mml:mrow><mml:mrow><mml:mn>3</mml:mn></mml:mrow><mml:mrow><mml:mo>-</mml:mo><mml:mtext>calc</mml:mtext></mml:mrow></mml:msubsup></mml:math></inline-formula> [&#x003BC;mol kg<sup>&#x02212;1</sup>] <xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">1722.46 &#x000B1; 69.23</td>
<td valign="top" align="center">1787.13 &#x000B1; 61.30</td>
<td valign="top" align="center">1955.63 &#x000B1; 49.43</td>
<td valign="top" align="center">2026.66 &#x000B1; 51.99</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">1850.73 &#x000B1; 71.53</td>
<td valign="top" align="center">1887.73 &#x000B1; 84.07</td>
<td valign="top" align="center">2124.18 &#x000B1; 49.81</td>
<td valign="top" align="center">2203.87 &#x000B1; 54.75</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left"><inline-formula><mml:math id="M11"><mml:msubsup><mml:mrow><mml:mtext>CO</mml:mtext></mml:mrow><mml:mrow><mml:mn>3</mml:mn></mml:mrow><mml:mrow><mml:mn>2</mml:mn><mml:mo>-</mml:mo><mml:mtext>calc</mml:mtext></mml:mrow></mml:msubsup></mml:math></inline-formula> [&#x003BC;mol kg<sup>&#x02212;1</sup>] <xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">247.06 &#x000B1; 27.99</td>
<td valign="top" align="center">219.93 &#x000B1; 32.65</td>
<td valign="top" align="center">153.3 &#x000B1; 21.24</td>
<td valign="top" align="center">122.07 &#x000B1; 25.67</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">211.75 &#x000B1; 28.10</td>
<td valign="top" align="center">196.77 &#x000B1; 22.68</td>
<td valign="top" align="center">105.26 &#x000B1; 11.73</td>
<td valign="top" align="center">88.68 &#x000B1; 18.55</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">&#x003A9;<sub>aragonite</sub>calc <xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">4.00 &#x000B1; 0.45</td>
<td valign="top" align="center">3.56 &#x000B1; 0.53</td>
<td valign="top" align="center">2.49 &#x000B1; 0.35</td>
<td valign="top" align="center">1.97 &#x000B1; 0.42</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">3.43 &#x000B1; 0.46</td>
<td valign="top" align="center">3.18 &#x000B1; 0.64</td>
<td valign="top" align="center">1.70 &#x000B1; 0.33</td>
<td valign="top" align="center">1.43 &#x000B1; 0.30</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">&#x003A9;<sub>calcite</sub>calc <xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">6.02 &#x000B1; 0.69</td>
<td valign="top" align="center">5.36 &#x000B1; 0.80</td>
<td valign="top" align="center">3.74 &#x000B1; 0.52</td>
<td valign="top" align="center">2.98 &#x000B1; 0.63</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">5.16 &#x000B1; 0.69</td>
<td valign="top" align="center">4.80 &#x000B1; 0.96</td>
<td valign="top" align="center">2.56 &#x000B1; 0.50</td>
<td valign="top" align="center">2.16 &#x000B1; 0.46</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>&#x0201C;Below-ambient&#x0201D; (BA), &#x0201C;Present-day&#x0201D; (PD), &#x0201C;Reduced-emission&#x0201D; (RE), and &#x0201C;Business-as-usual&#x0201D; (BU). Temperature, salinity, A<sub>T</sub> and DIC were measured and used to calculate pH and the other carbonate system state parameters (indicated with superscript <sup>calc</sup>). The variable <inline-formula><mml:math id="M12"><mml:msubsup><mml:mrow><mml:mtext>pCO</mml:mtext></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow><mml:mrow><mml:mtext>meas</mml:mtext></mml:mrow></mml:msubsup></mml:math></inline-formula> represents the measured pCO<sub>2</sub> by the LICOR from the air space in the treatment barrels (after attaining the temperature of the aquaria), whereas <inline-formula><mml:math id="M13"><mml:msubsup><mml:mrow><mml:mtext>pCO</mml:mtext></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow><mml:mrow><mml:mtext>calc</mml:mtext></mml:mrow></mml:msubsup></mml:math></inline-formula> represents calculated pCO<sub>2</sub> from A<sub>T</sub> and DIC measurements in the aquaria at the start of incubations averaged for each scenario</italic>.</p>
<fn id="TN1">
<label>&#x0002A;</label>
<p><italic>Significant difference across all OA scenarios marked with an asterix</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Initial (T<sub>0</sub>) and final (T<sub>6</sub>) DOC and nutrient concentrations averaged over all incubations (&#x000B1; standard deviation) for the three &#x0201C;eutrophication&#x0201D; treatments: &#x0201C;E1&#x0201D; (natural organic loading), &#x0201C;E2&#x0201D; (double labile organic loading), &#x0201C;E3&#x0201D; (triple labile organic loading).</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th/>
<th valign="top" align="center"><bold>E1</bold></th>
<th valign="top" align="center"><bold>E2</bold></th>
<th valign="top" align="center"><bold>E3</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">DOC [&#x003BC;mol kg<sup>&#x02212;1</sup>]<xref ref-type="table-fn" rid="TN2"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">82 &#x000B1; 4</td>
<td valign="top" align="center">96 &#x000B1; 4</td>
<td valign="top" align="center">106 &#x000B1; 13</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">106 &#x000B1; 12</td>
<td valign="top" align="center">122 &#x000B1; 18</td>
<td valign="top" align="center">123 &#x000B1; 19</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">NO<sub>x</sub> [&#x003BC;mol kg<sup>&#x02212;1</sup>]</td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">1.0 &#x000B1; 0.4</td>
<td valign="top" align="center">1.0 &#x000B1; 0.5</td>
<td valign="top" align="center">1.0 &#x000B1; 0.5</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">1.1 &#x000B1; 0.5</td>
<td valign="top" align="center">1.1 &#x000B1; 0.5</td>
<td valign="top" align="center">1.3 &#x000B1; 0.7</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">NO<sub>2</sub> [&#x003BC;mol kg<sup>&#x02212;1</sup>]</td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">0.1 &#x000B1; 0.04</td>
<td valign="top" align="center">0.1 &#x000B1; 0.03</td>
<td valign="top" align="center">0.2 &#x000B1; 0.1</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">0.2 &#x000B1; 0.1</td>
<td valign="top" align="center">0.2 &#x000B1; 0.1</td>
<td valign="top" align="center">0.3 &#x000B1; 0.1</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">NH<sub>4</sub> [&#x003BC;mol kg<sup>&#x02212;1</sup>]</td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">2.6 &#x000B1; 0.3</td>
<td valign="top" align="center">3.4 &#x000B1; 2.8</td>
<td valign="top" align="center">4.3 &#x000B1; 4.1</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">19.4 &#x000B1; 12.1</td>
<td valign="top" align="center">24.6 &#x000B1; 14.0</td>
<td valign="top" align="center">25.3 &#x000B1; 11.8</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">PO<sub>4</sub> [&#x003BC;mol kg<sup>&#x02212;1</sup>]<xref ref-type="table-fn" rid="TN2"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="left">T<sub>0</sub></td>
<td valign="top" align="center">0.01 &#x000B1; 0.01</td>
<td valign="top" align="center">1.4 &#x000B1; 0.9</td>
<td valign="top" align="center">2.9 &#x000B1; 2.3</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">T<sub>6</sub></td>
<td valign="top" align="center">0.5 &#x000B1; 0.5</td>
<td valign="top" align="center">2.41 &#x000B1; 1.0</td>
<td valign="top" align="center">4.0 &#x000B1; 2.5</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="TN2">
<label>&#x0002A;</label>
<p><italic>Significant difference across eutrophication scenarios marked with an asterix</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<p>Bioerosion, photosynthesis and respiration within incubations altered the carbonate chemistry of the water (Table <xref ref-type="table" rid="T1">1</xref>). Within the holobiont microenvironment, photosynthesis would increase the local pH while respiration would increase local acidification. Throughout all incubations, the <italic>p</italic>CO<sub>2</sub> concentrations increased and the pH and O<sub>aragonite</sub> decreased. The change in <italic>p</italic>CO<sub>2</sub>, pH and O<sub>aragonite</sub> was significantly different between <italic>p</italic>CO<sub>2</sub> scenarios and between day and night. In none of the incubations, O<sub>aragonite</sub> reached values below 1. Initial <italic>p</italic>CO<sub>2</sub> concentrations calculated from A<sub>T</sub> and DIC at the beginning of each chamber incubation were found to increase slightly with addition of RPMI for each OA scenario. Accordingly, pH and CaCO<sub>3</sub> saturation state decreased with addition of RPMI for each OA scenario. However, no significant difference was found in calculated <italic>p</italic>CO<sub>2</sub> concentrations, pH, and CaCO<sub>3</sub> saturation state between eutrophication treatments in each OA scenario. Dissolved organic carbon and nutrient concentrations increased overall throughout incubations (Table <xref ref-type="table" rid="T2">2</xref>, Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">S2</xref>).</p>
<p>The observed increase in nutrients (Table <xref ref-type="table" rid="T2">2</xref>) was not unexpected (Maldonado et al., <xref ref-type="bibr" rid="B45">2012</xref>), but the enhanced concentrations could have interfered S2 with chemical bioerosion measurements. The increase in dissolved organic carbon (Table <xref ref-type="table" rid="T2">2</xref>) was likely caused by the confinement of sponges in the incubation chambers, where sponge waste products were re-filtered during the 6 h incubation. Nevertheless, <italic>Cliona delitrix</italic>, another clinoid sponge, is known to assimilate DOM, which comprises a large part of its diet (Mueller et al., <xref ref-type="bibr" rid="B48">2014</xref>). Despite these confinement effects, relative differences in bioerosional processes between treatments were still observed.</p>
</sec>
<sec>
<title>Chemical bioerosion rates</title>
<p>In total, 72 chamber incubations were conducted (36 during the day and 36 at night) after 1 week exposure to treatments. Of all incubations, 13 were compromised due to technical complications. The results for the successful 59 incubations are presented here. For the present-day (PD) <italic>p</italic>CO<sub>2</sub> scenario, no data in treatment E2 during the day are available.</p>
<p>As sponges experienced significant increase in <italic>p</italic>CO<sub>2</sub> concentrations throughout incubations, chemical rates were regressed against the average calculated <italic>p</italic>CO<sub>2</sub> obtained from A<sub><italic>T</italic></sub> and DIC measurement at the start and end of each incubations. As a result, for each <italic>p</italic>CO<sub>2</sub> scenario, day and night pCO<sub>2</sub> levels differ from each other.</p>
<p>Chemical bioerosion rates of <italic>C. caribbaea</italic> increased significantly with <italic>p</italic>CO<sub>2</sub> and eutrophication levels but no interaction was found between the two effects (Figure <xref ref-type="fig" rid="F3">3</xref>, Tables <xref ref-type="table" rid="T3">3</xref>, <xref ref-type="table" rid="T5">5</xref>). In addition, day-time chemical bioerosion rates are shown to differ significantly from night-time rates, and an interaction between the effects of <italic>p</italic>CO<sub>2</sub> and day-night is revealed (Tables <xref ref-type="table" rid="T3">3</xref>, <xref ref-type="table" rid="T4">4</xref>). A <italic>post hoc</italic> pairwise comparison revealed that the significant differences in chemical bioerosion rates between day and night mostly occurred at low <italic>p</italic>CO<sub>2</sub> scenarios where day time rates were &#x0007E;50% higher than night-time rates. In high <italic>p</italic>CO<sub>2</sub> scenarios (RE and BU), average day-time and night-time rates were equal in E1 and average night-time rates surpassed day-time ones in E2 and E3 (Table <xref ref-type="table" rid="T3">3</xref>). The increase in <italic>p</italic>CO<sub>2</sub> concentration during incubations at day and night was not significantly different between PD, RS, and BU. This indicates that the switch from higher rates during the day at low <italic>p</italic>CO<sub>2</sub> scenarios (BA and PR) to equal/higher rates in RE and BU is not primarily linked to the difference in day and night <italic>p</italic>CO<sub>2.</sub></p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Chemical bioerosion rates in mg cm<sup>&#x02212;2</sup> h<sup>&#x02212;1</sup> as a function of <italic>p</italic>CO<sub>2</sub> for day and night and each eutrophication treatment. Linear regressions illustrate positive correlation between <italic>p</italic>CO2 and dissolution rates. Slopes are significantly different between day (blue) and night (black) but not between eutrophication scenarios (E1&#x02013;E3). Alkalinity titrations for incubations in Present scenario (PD) and E2 treatment during the day were of questionable quality due to equipment failure and therefore not represented here (<italic>N</italic> &#x0003D; 59).</p></caption>
<graphic xlink:href="fmars-04-00311-g0003.tif"/>
</fig>
<table-wrap position="float" id="T3">
<label>Table 3</label>
<caption><p>Averages (&#x000B1;standard deviation) of chemical bioerosion rates in mg cm<sup>&#x02212;2</sup> h<sup>&#x02212;1</sup>, as calculated from change in A<sub>T</sub> during incubations.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th/>
<th valign="top" align="center"><bold>E1</bold></th>
<th valign="top" align="center"><bold>E2</bold></th>
<th valign="top" align="center"><bold>E3</bold></th>
<th/>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">BA</td>
<td valign="top" align="left">Day</td>
<td valign="top" align="center">0.004 &#x000B1; 0.003</td>
<td valign="top" align="center">0.005 &#x000B1; 0.002</td>
<td valign="top" align="center">0.006 &#x000B1; 0.002</td>
<td valign="middle" align="left" rowspan="4"><inline-graphic xlink:href="fmars-04-00311-i0001.tif"/></td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Night</td>
<td valign="top" align="center">0.003 &#x000B1; 0.003</td>
<td valign="top" align="center">0.001 &#x000B1; 0.001</td>
<td valign="top" align="center">0.002 &#x000B1; 0.001</td>
</tr>
<tr>
<td valign="top" align="left">PR</td>
<td valign="top" align="left">Day</td>
<td valign="top" align="center">0.004 &#x000B1; 0.002</td>
<td valign="top" align="center">X</td>
<td valign="top" align="center">0.007 &#x000B1; 0.001</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Night</td>
<td valign="top" align="center">0.002 &#x000B1; 0.002</td>
<td valign="top" align="center">0.002 &#x000B1; 0.001</td>
<td valign="top" align="center">0.003 &#x000B1; 0.003</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">RE</td>
<td valign="top" align="left">Day</td>
<td valign="top" align="center">0.004 &#x000B1; 0.002</td>
<td valign="top" align="center">0.005 &#x000B1; 0.001</td>
<td valign="top" align="center">0.006 &#x000B1; 0.001</td>
<td valign="middle" align="left" rowspan="2"><inline-graphic xlink:href="fmars-04-00311-i0002.tif"/></td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Night</td>
<td valign="top" align="center">0.005 &#x000B1; 0.001</td>
<td valign="top" align="center">0.005 &#x000B1; 0.003</td>
<td valign="top" align="center">0.006 &#x000B1; 0.002</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">BU</td>
<td valign="top" align="left">Day</td>
<td valign="top" align="center">0.007 &#x000B1; 0.003</td>
<td valign="top" align="center">0.006 &#x000B1; 0.001</td>
<td valign="top" align="center">0.009 &#x000B1; 0.003</td>
<td valign="middle" align="left" rowspan="2"><inline-graphic xlink:href="fmars-04-00311-i0003.tif"/></td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Night</td>
<td valign="top" align="center">0.008 &#x000B1; 0.001</td>
<td valign="top" align="center">0.007 &#x000B1; 0.002</td>
<td valign="top" align="center">0.010 &#x000B1; 0.004</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Values are provided for in each OA scenario, eutrophication treatment, and light regime. In BA and PR scenarios (A), day-time rates are generally more than &#x0007E; 50% higher than night-time rates. In RE scenario (B), day-time and night-time rates are roughly similar, while in BU (C) night-time rates surpass day-time rates in the in all eutrophication treatments</italic>.</p>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="T4">
<label>Table 4</label>
<caption><p>Daily averages (&#x000B1;standard deviation) of total, mechanical, and chemical bioerosion rates in mg cm<sup>&#x02212;2</sup> d<sup>&#x02212;1</sup>.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th/>
<th valign="top" align="center"><bold>E1</bold></th>
<th valign="top" align="center"><bold>E2</bold></th>
<th valign="top" align="center"><bold>E3</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">BA</td>
<td valign="top" align="left">Total BW</td>
<td valign="top" align="center">2.21 &#x000B1; 0.61</td>
<td valign="top" align="center">2.53 &#x000B1; 0.61</td>
<td valign="top" align="center">2.55 &#x000B1; 0.59</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Mechanical</td>
<td valign="top" align="center">0.23 &#x000B1; 0.03</td>
<td valign="top" align="center">0.51 &#x000B1; 0.15</td>
<td valign="top" align="center">0.38 &#x000B1; 0.08</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Chemical</td>
<td valign="top" align="center">0.05 &#x000B1; 0.02</td>
<td valign="top" align="center">0.08 &#x000B1; 0.01</td>
<td valign="top" align="center">0.09 &#x000B1; 0.04</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">PR</td>
<td valign="top" align="left">Total BW</td>
<td valign="top" align="center">2.81 &#x000B1; 0.98</td>
<td valign="top" align="center">2.05 &#x000B1; 0.20</td>
<td valign="top" align="center">2.84 &#x000B1; 1.12</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Mechanical</td>
<td valign="top" align="center">0.40 &#x000B1; 0.09</td>
<td valign="top" align="center">0.31 &#x000B1; 0.07</td>
<td valign="top" align="center">0.39 &#x000B1; 0.13</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Chemical</td>
<td valign="top" align="center">0.06 &#x000B1; 0.02</td>
<td valign="top" align="center">x</td>
<td valign="top" align="center">0.11 &#x000B1; 0.04</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">RS</td>
<td valign="top" align="left">Total BW</td>
<td valign="top" align="center">2.61 &#x000B1; 1.01</td>
<td valign="top" align="center">2.94 &#x000B1; 1.47</td>
<td valign="top" align="center">3.39 &#x000B1; 1.40</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Mechanical</td>
<td valign="top" align="center">0.50 &#x000B1; 0.17</td>
<td valign="top" align="center">0.33 &#x000B1; 0.09</td>
<td valign="top" align="center">0.40 &#x000B1; 0.13</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Chemical</td>
<td valign="top" align="center">0.10 &#x000B1; 0.02</td>
<td valign="top" align="center">0.13 &#x000B1; 0.03</td>
<td valign="top" align="center">0.12 &#x000B1; 0.05</td>
</tr>
<tr style="border-top: thin solid #000000;">
<td valign="top" align="left">BU</td>
<td valign="top" align="left">Total BW</td>
<td valign="top" align="center">3.08 &#x000B1; 0.66</td>
<td valign="top" align="center">4.19 &#x000B1; 1.04</td>
<td valign="top" align="center">2.76 &#x000B1; 0.45</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Mechanical</td>
<td valign="top" align="center">0.23 &#x000B1; 0.07</td>
<td valign="top" align="center">0.43 &#x000B1; 0.18</td>
<td valign="top" align="center">0.59 &#x000B1; 0.22</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Chemical</td>
<td valign="top" align="center">0.15 &#x000B1; 0.06</td>
<td valign="top" align="center">0.15 &#x000B1; 0.02</td>
<td valign="top" align="center">0.23 &#x000B1; 0.08</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Values are provided for each OA scenario and eutrophication treatment. Daily total bioerosion rates are calculated using buoyant weight measurements. Daily mechanical and chemical bioerosion rates are the sum of hourly day and night rates, each multiplied by 12</italic>.</p>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="T5">
<label>Table 5</label>
<caption><p>Three-way ANCOVAs, with bioerosion rates (chemical: A<sub>T</sub> change, mechanical: chip production, and total: buoyant weight) and net respiration rates as dependent factors, eutrophication, and day/night as independent categorical factors and <italic>p</italic>CO<sub>2</sub> as a continuous covariable.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Rates</bold></th>
<th valign="top" align="center"><bold>df</bold></th>
<th valign="top" align="center"><bold>SS</bold></th>
<th valign="top" align="center"><bold>MS</bold></th>
<th valign="top" align="center"><bold><italic>F</italic>-value</bold></th>
<th valign="top" align="center"><bold><italic>P</italic>-value</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="6" style="background-color:#bbbdc0"><bold>CHEMICAL BIOEROSION RATES</bold></td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub></td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2.1e-04</td>
<td valign="top" align="center">2.1e-04</td>
<td valign="top" align="center">31.19</td>
<td valign="top" align="center">&#x0003C;<bold>0.001</bold></td>
</tr>
<tr>
<td valign="top" align="left">Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">6.0e-05</td>
<td valign="top" align="center">3.0e-05</td>
<td valign="top" align="center">3.32</td>
<td valign="top" align="center"><bold>0.04</bold></td>
</tr>
<tr>
<td valign="top" align="left">day/night</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">8.9e-06</td>
<td valign="top" align="center">8.9e-06</td>
<td valign="top" align="center">0.91</td>
<td valign="top" align="center">0.34</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1.4e-05</td>
<td valign="top" align="center">7.2e-05</td>
<td valign="top" align="center">1.77</td>
<td valign="top" align="center">0.18</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: day/night</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">5.1e-05</td>
<td valign="top" align="center">5.1e-05</td>
<td valign="top" align="center">12.63</td>
<td valign="top" align="center">&#x0003C;<bold>0.001</bold></td>
</tr>
<tr>
<td valign="top" align="left">Eutro: day/night</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1.0e-05</td>
<td valign="top" align="center">5.0e-06</td>
<td valign="top" align="center">1.24</td>
<td valign="top" align="center">0.30</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro: day/night</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1.1e-05</td>
<td valign="top" align="center">5.3e-06</td>
<td valign="top" align="center">1.31</td>
<td valign="top" align="center">0.28</td>
</tr>
<tr>
<td valign="top" align="left">Residuals</td>
<td valign="top" align="center">51</td>
<td valign="top" align="center">2.1e-04</td>
<td valign="top" align="center">4.1e-06</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left" colspan="6" style="background-color:#bbbdc0"><bold>MECHANICAL BIOEROSION RATES</bold></td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub></td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">2.5e-05</td>
<td valign="top" align="center">2.5e-05</td>
<td valign="top" align="center">0.47</td>
<td valign="top" align="center">0.50</td>
</tr>
<tr>
<td valign="top" align="left">Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1.3 e-05</td>
<td valign="top" align="center">6.4e-06</td>
<td valign="top" align="center">0.12</td>
<td valign="top" align="center">0.89</td>
</tr>
<tr>
<td valign="top" align="left">day/night</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">1.9e-06</td>
<td valign="top" align="center">1.9e-06</td>
<td valign="top" align="center">0.36</td>
<td valign="top" align="center">0.55</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1.2e-04</td>
<td valign="top" align="center">6.3e-05</td>
<td valign="top" align="center">1.18</td>
<td valign="top" align="center">0.33</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: day/night</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">1.4e-04</td>
<td valign="top" align="center">1.4e-04</td>
<td valign="top" align="center">2.65</td>
<td valign="top" align="center">0.12</td>
</tr>
<tr>
<td valign="top" align="left">Eutro: day/night</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">8.6e-05</td>
<td valign="top" align="center">4.3e-05</td>
<td valign="top" align="center">0.81</td>
<td valign="top" align="center">0.46</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro: day/night</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2.1e-04</td>
<td valign="top" align="center">1.1e-04</td>
<td valign="top" align="center">1.99</td>
<td valign="top" align="center">0.16</td>
</tr>
<tr>
<td valign="top" align="left">Residuals</td>
<td valign="top" align="center">19</td>
<td valign="top" align="center">1.0e-03</td>
<td valign="top" align="center">5.3e-5</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left" colspan="6" style="background-color:#bbbdc0"><bold>TOTAL BIOEROSION RATES</bold></td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub></td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">7.63</td>
<td valign="top" align="center"><bold>0.009</bold></td>
</tr>
<tr>
<td valign="top" align="left">Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.002</td>
<td valign="top" align="center">0.001</td>
<td valign="top" align="center">0.52</td>
<td valign="top" align="center">0.6</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.003</td>
<td valign="top" align="center">2.34</td>
<td valign="top" align="center">0.11</td>
</tr>
<tr>
<td valign="top" align="left">Residuals</td>
<td valign="top" align="center">48</td>
<td valign="top" align="center">0.07</td>
<td valign="top" align="center">0.001</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left" colspan="6" style="background-color:#bbbdc0"><bold>NET RESPIRATION RATES</bold></td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub></td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">1.73</td>
<td valign="top" align="center">0.19</td>
</tr>
<tr>
<td valign="top" align="left">Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.02</td>
<td valign="top" align="center">1.15</td>
<td valign="top" align="center">0.33</td>
</tr>
<tr>
<td valign="top" align="left">day/night</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0.50</td>
<td valign="top" align="center">0.50</td>
<td valign="top" align="center">28.13</td>
<td valign="top" align="center">&#x0003C;<bold>0.001</bold></td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.001</td>
<td valign="top" align="center">0.001</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.96</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: day/night</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0.08</td>
<td valign="top" align="center">0.08</td>
<td valign="top" align="center">4.23</td>
<td valign="top" align="center"><bold>0.04</bold></td>
</tr>
<tr>
<td valign="top" align="left">Eutro: day/night</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.72</td>
<td valign="top" align="center">0.49</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro: day/night</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.02</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.43</td>
<td valign="top" align="center">0.66</td>
</tr>
<tr>
<td valign="top" align="left">Residuals</td>
<td valign="top" align="center">48</td>
<td valign="top" align="center">0.84</td>
<td valign="top" align="center">0.02</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left" colspan="6" style="background-color:#bbbdc0"><bold>NET PHOTOSYNTHESIS RATES</bold></td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub></td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">0.003</td>
<td valign="top" align="center">14.75</td>
<td valign="top" align="center"><bold>0.004</bold></td>
</tr>
<tr>
<td valign="top" align="left">Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.0004</td>
<td valign="top" align="center">0.0002</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.96</td>
</tr>
<tr>
<td valign="top" align="left"><italic>p</italic>CO<sub>2</sub>: Eutro</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.003</td>
<td valign="top" align="center">2.03</td>
<td valign="top" align="center">0.52</td>
</tr>
<tr>
<td valign="top" align="left">Residuals</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.002</td>
<td/>
<td/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Total bioerosion rates and net photosynthesis rates were analyzed using two-way ANOVAs with two categorical factors (pCO<sub>2</sub>, eutrophication). Significant values in <bold>bold</bold></italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>Average day and night chemical bioerosion rates increased significantly from E1 to E3 for each of the <italic>p</italic>CO<sub>2</sub> scenarios, however, increases in rates from E1 to E2 were minute and even negative at night (Table <xref ref-type="table" rid="T3">3</xref>). Daily chemical rates (mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup>) in BA, PR, RE, and BU increased by 80, 83, 20, and 53% from E1 to E3, respectively (Table <xref ref-type="table" rid="T4">4</xref>). Rates in E1 and E3 increased by 150 and 109% respectively from current <italic>p</italic>CO<sub>2</sub> levels to the BU scenario (no PD, E2 chemical rate available).</p>
<p>In these calculations, abiotic dissolution was assumed negligible as aragonite saturation states always remained above 1. Possible bioerosion by other organisms living in the cores is not accounted for in our calculations but is considered minimal throughout the incubation period due to very low A<sub>T</sub> changes in control core incubations (Supplementary Table <xref ref-type="supplementary-material" rid="SM1">S1</xref>).</p>
</sec>
<sec>
<title>Mechanical and total bioerosion rates</title>
<p>Mechanical bioerosion estimated from chip collection was not significantly different between <italic>p</italic>CO<sub>2</sub> scenarios and eutrophication treatments and no interaction was found between effects (Tables <xref ref-type="table" rid="T4">4</xref>, <xref ref-type="table" rid="T5">5</xref>). The average hourly mechanical erosion rate for all <italic>p</italic>CO<sub>2</sub> scenarios and eutrophication treatments during day and night equaled 0.02 &#x000B1; 0.01 mg cm<sup>&#x02212;2</sup> h<sup>&#x02212;1</sup>. The average daily rate estimated from the addition of night and day rates equaled to 0.40 &#x000B1; 0.11 mg cm<sup>&#x02212;2</sup> d<sup>&#x02212;1</sup>.</p>
<p>The change in buoyant weight yielded average net bioerosion rates of 2.47 &#x000B1; 0.16, 2.63 &#x000B1; 0.25, 2.96 &#x000B1; 0.33, and 3.34 &#x000B1; 0.26 mg cm<sup>&#x02212;2</sup> d<sup>&#x02212;1</sup> for BA, PD, RE, and BU, respectively and increased significantly with <italic>p</italic>CO<sub>2</sub> (<italic>p</italic> &#x0003D; 0.009; Figure <xref ref-type="fig" rid="F4">4</xref>, Table <xref ref-type="table" rid="T5">5</xref>). Although in most <italic>p</italic>CO<sub>2</sub> scenarios, treatment E2 and E3 yielded higher total bioerosion rates than in E1, rates were not found to increase significantly with eutrophication (Figure <xref ref-type="fig" rid="F4">4</xref>, Table <xref ref-type="table" rid="T5">5</xref>). Net bioerosion rates calculated from buoyant weight measurements were &#x0007E;4&#x02013;5 times higher than the sum of the measured chemical and mechanical (chips) bioerosion rates at day and night (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F5">5</xref>, Table <xref ref-type="table" rid="T4">4</xref>).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Total bioerosion rates of <italic>C. caribbaea</italic> in mg cm<sup>&#x02212;2</sup> d<sup>&#x02212;1</sup> estimated from buoyant weight measurements &#x000B1; SEM for each <italic>p</italic>CO<sub>2</sub> and eutrophication scenario. Estimates for buoyant weighing are based on all individual measurements (<italic>N</italic> &#x0003D; 59).</p></caption>
<graphic xlink:href="fmars-04-00311-g0004.tif"/>
</fig>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p>Sum of chemical and mechanical bioerosion in mg cm<sup>&#x02212;2</sup> d<sup>&#x02212;1</sup> for each <italic>p</italic>CO<sub>2</sub> and eutrophication scenario. Mechanical bioerosion rates were estimated using the weight of chips collected during 6 h incubations. Chips were only collected for table A and B during the day and night (<italic>N</italic> &#x0003D; 44). Chemical bioerosion rates were calculated from &#x00394;A<sub>T</sub> in incubations (<italic>N</italic> &#x0003D; 59). Day (24 h) rates were calculated by multiplying day and night mechanical and chemical hourly rates by 12 and adding them together for each <italic>p</italic>CO<sub>2</sub> and eutrophication scenario.</p></caption>
<graphic xlink:href="fmars-04-00311-g0005.tif"/>
</fig>
</sec>
<sec>
<title>Net respiration and photosynthetic rates</title>
<p>Net holobiont (sponge &#x0002B; symbionts) respiration showed antagonistic behavior between day and night as <italic>p</italic>CO<sub>2</sub> increased. Net respiration during the day decreased with high pCO<sub>2</sub> while net respiration at night increased (Figure <xref ref-type="fig" rid="F6">6</xref>). Rates were found to vary significantly between day and night (<italic>p</italic> &#x02264; 0.001) but not between <italic>p</italic>CO<sub>2</sub> scenarios and eutrophication treatments. An interaction between factors day/night and <italic>p</italic>CO<sub>2</sub> levels was revealed (Table <xref ref-type="table" rid="T5">5</xref>).</p>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p>Net respiration rates (Resp<sub>net</sub>) during the day (dark orange), dark respiration rates (dark Resp) during the night (light orange) and gross photosynthesis (P<sub>gross</sub>) of the holobiont (sponge &#x0002B; symbionts) &#x000B1; SEM for each <italic>p</italic>CO<sub>2</sub> and eutrophication scenario. P<sub>gross</sub> was derived from the net respiration of the symbionts (shown as negative respiration in the figure by assuming that 1 mole CO<sub>2</sub> respired during the night equals 1 mole O<sub>2</sub> produced during the day).</p></caption>
<graphic xlink:href="fmars-04-00311-g0006.tif"/>
</fig>
<p>Accordingly, photosynthesis rates (O<sub>2</sub> production), estimated from the difference between net respiration rates at day and night, increased significantly with increasing <italic>p</italic>CO<sub>2</sub> (<italic>p</italic> &#x0003D; 0.004; Figure <xref ref-type="fig" rid="F6">6</xref>, Table <xref ref-type="table" rid="T5">5</xref>). No significant difference was found between primary production and eutrophication scenarios, although photosynthetic activity appeared to decrease with increasing eutrophication in most <italic>p</italic>CO<sub>2</sub> scenarios.</p>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>Total bioerosion rates by the common coral excavating sponge <italic>Cliona caribbaea</italic> are experimentally shown to increase with rising <italic>p</italic>CO<sub>2</sub> (Figure <xref ref-type="fig" rid="F4">4</xref>), while the corresponding chemical bioerosion component increased significantly with both <italic>p</italic>CO<sub>2</sub> and eutrophication (Figure <xref ref-type="fig" rid="F3">3</xref>). Mechanical bioerosion exceeded chemical bioerosion by 3&#x02013;6 times irrespective of <italic>p</italic>CO<sub>2</sub> and eutrophication. Contribution of eutrophication to higher chemical bioerosion rates was additive to <italic>p</italic>CO<sub>2</sub> effects (i.e., not synergetic). Differences between day-time and night-time chemical bioerosion rates at below-ambient and present <italic>p</italic>CO<sub>2</sub> levels suggests that photosynthetic activity by symbionts promotes the dissolution process. While under rising <italic>p</italic>CO<sub>2</sub>, the symbiotic relationship appears to become negligible to the bioerosion activity as night-time rates equal/surpass day-time rates.</p>
<sec>
<title>Effects of pCO<sub>2</sub> and eutrophication on bioerosion</title>
<p>Results regarding higher rates at increased <italic>p</italic>CO<sub>2</sub> are comparable to previous studies on other clionaid species (<italic>C. orientalis</italic> and <italic>C. celata</italic>) (Wisshak et al., <xref ref-type="bibr" rid="B72">2012</xref>, <xref ref-type="bibr" rid="B71">2013</xref>, <xref ref-type="bibr" rid="B70">2014</xref>; Fang et al., <xref ref-type="bibr" rid="B17">2013a</xref>). Sponges and other borers are assumed to benefit from eutrophication (Holmes, <xref ref-type="bibr" rid="B33">2000</xref>; Carballo et al., <xref ref-type="bibr" rid="B5">2008</xref>). Many sponges on reefs harbor photosynthetic symbionts and in some cases they produce &#x0003E;50% of the energy requirements of the host (Erwin and Thacker, <xref ref-type="bibr" rid="B16">2008</xref>). They rely nevertheless also on organic matter for food and their feeding strategy may be flexible depending on the type of symbionts or the environmental conditions. To maintain a positive energy budget, <italic>C. caribbaea</italic> likely relies mainly on autotrophic products (Weisz et al., <xref ref-type="bibr" rid="B68">2010</xref>; Fang et al., <xref ref-type="bibr" rid="B20">2014</xref>) and thus depends on the supply of organic matter for maintenance and growth from its photosymbionts. Considering the low phosphate concentrations in E1 (&#x0007E;0.01 &#x003BC;mol l<sup>&#x02212;1</sup>), primary production may have been limited by phosphate. However, the addition of RPMI and hence higher phosphate concentrations did not enhance photosynthetic activity from E1 to E3. On the contrary, in most <italic>p</italic>CO<sub>2</sub> scenarios, net primary production estimates decreased slightly (non-significant) from E1 to E3, while sponge chemical bioerosion rates were enhanced. It should be noted here that potential light limitation of symbiont photosynthesis in the incubations tanks may not be discounted. Under increased organic matter and nutrient levels, the sponges may be less dependent on autotrophic products. However, as the increase in chemical bioerosion rates from E1 to E3 was more pronounced during the day (at low and ambient <italic>p</italic>CO<sub>2</sub> levels), it is likely that the autotrophic/heterotrophic ratio of energy supply only shifts slightly toward heterotrophy and the sponges still rely partly on autotrophic products.</p>
<p>Chemical bioerosion rates at night-time increase also (at a lesser degree) with higher eutrophication, indicating that chemical bioerosion does indeed benefit from a higher energy supply via heterotrophic feeding. This implies that increased eutrophication did not impact the productivity of the symbionts. Sponges, like corals, can exercise control on symbiont growth and abundance by inhibiting division or ingesting them to maintain population size near a carrying capacity (Hill, <xref ref-type="bibr" rid="B31">2014</xref>).</p>
<p>Total bioerosion rates calculated using buoyant weight measurements were experimentally shown to increase significantly with <italic>p</italic>CO<sub>2</sub> but not with eutrophication. These results are unexpected considering the significant impact eutrophication has on chemical bioerosion. However, the relatively short term experiment coupled with the smaller effect of eutrophication on chemical rates compared to the <italic>p</italic>CO<sub>2</sub> impact may have obscured this signal.</p>
<p>Total bioerosion rates estimated from buoyant weights resulted in &#x0007E;5 times higher rates than those based on the sum of chip production and the change in A<sub>T</sub> (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F5">5</xref>). This is comparable to results from Fang et al. (<xref ref-type="bibr" rid="B17">2013a</xref>) and may be explained by an underestimation of the chip removal capacity of the sponge. Rates calculated using buoyant weight measurements are based on a longer period of bioerosion (1 week), whereas the chip removal is based on their collection at the end of a relatively short incubation period (6 h). Sponges might expel chips irregularly or they may temporarily reduce chip removal during incubations possibly due to stress caused by reduced food supply or build-up of waste products, both of which may become important toward the end of the 6 h-incubation period. Therefore, the sum of chemical and mechanical bioerosion should be considered as being conservative. Here, total bioerosion rates yielded from buoyant weight measurements are regarded as more reliable and are comparable to results estimated from previous studies (Fang et al., <xref ref-type="bibr" rid="B17">2013a</xref>; Wisshak et al., <xref ref-type="bibr" rid="B71">2013</xref>).</p>
<p>Rates of chip production did not differ significantly between <italic>p</italic>CO<sub>2</sub> scenarios, day/night and eutrophication treatments. Although the underlying method by which sponges expel chips is largely unknown, it appears that chips are expelled from the sponge body through excurrent canals (R&#x000FC;tzler and Rieger, <xref ref-type="bibr" rid="B56">1973</xref>). It is likely that chip removal processes utilize products from the dissolution to contract their tissue and move the chip up from the boring pit into an excurrent canal. Work on phototrophic cyanobacteria showed that microbial excavation was achieved by transcellular Ca<sup>2&#x0002B;</sup> transport (Garcia-Pichel, <xref ref-type="bibr" rid="B22">2006</xref>; Garcia-Pichel et al., <xref ref-type="bibr" rid="B23">2010</xref>; Guida and Garcia-Pichel, <xref ref-type="bibr" rid="B29">2016</xref>). We tentatively suggest that the excess in Ca<sup>2&#x0002B;</sup> derived from the dissolution in <inline-formula><mml:math id="M14"><mml:msubsup><mml:mrow><mml:mtext>CaCO</mml:mtext></mml:mrow><mml:mrow><mml:mn>3</mml:mn></mml:mrow><mml:mrow><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:math></inline-formula> may be used by sponges to contract a conductive pathway, similarly to how muscle cell contract when triggered by an increase in intracellular Ca<sup>2&#x0002B;</sup> (Sommerville and Hartshorne, <xref ref-type="bibr" rid="B64">1986</xref>).</p>
</sec>
<sec>
<title>Respiration, photosynthesis and changes in chemical bioerosion rates</title>
<p>Changes in chemical bioerosion activity can be associated with three processes within the holobiont: CO<sub>2</sub> fixation/respiration by the symbionts, respiration by the sponge and chemical bioerosion. Photosynthesis promotes chemical bioerosion rates during the day at low <italic>p</italic>CO<sub>2</sub> levels (BA and PD) (Figure <xref ref-type="fig" rid="F3">3</xref>, Table <xref ref-type="table" rid="T3">3</xref>). Differences in rates between day and night are comparable to results from previous studies where <italic>C. orientalis</italic> and <italic>C. varians</italic> (both symbiont bearing species) excavated with higher rates in day light compared to the dark or shade at ambient <italic>p</italic>CO<sub>2</sub> (Hill, <xref ref-type="bibr" rid="B30">1996</xref>; Sch&#x000F6;nberg, <xref ref-type="bibr" rid="B59">2006</xref>; Fang et al., <xref ref-type="bibr" rid="B18">2016</xref>). Recent work by Fang et al. (<xref ref-type="bibr" rid="B18">2016</xref>) on the ecophysiology of <italic>C. orientalis</italic> showed that bioerosion rates in this sponge during day-time were &#x0007E;40% higher than in the dark. <italic>C. celata</italic> on the other hand, an azooxanthellate sponge, displayed no diurnal variability in bioerosion pattern (Sch&#x000F6;nberg, <xref ref-type="bibr" rid="B60">2008</xref>). Based on these findings, presence of <italic>Symbiodinium spp</italic>. was assumed to be associated with higher bioerosion rates (Hill, <xref ref-type="bibr" rid="B30">1996</xref>; Fang et al., <xref ref-type="bibr" rid="B18">2016</xref>). Geochemically speaking, this is a paradox because the autotrophic symbionts would tend to increase pH, increase saturation state and thereby aid carbonate precipitation rather than its antagonistic process (Garcia-Pichel et al., <xref ref-type="bibr" rid="B23">2010</xref>).</p>
<p>However, local acidification due to sponge respiration may balance out the increase in pH associated with photosynthesis. As symbionts do not produce a favorable environment for carbonate dissolution, photosynthesis must therefore supply a high fraction of the energetic costs of the bioerosion process which may include ATP usage for active Ca<sup>2&#x0002B;</sup> and/or active proton pumping (Guida and Garcia-Pichel, <xref ref-type="bibr" rid="B29">2016</xref>). Higher rates during the day at low and ambient <italic>p</italic>CO<sub>2</sub> indicate that the benefit of acquired energy from photosynthetic activity exceeds the benefit of increased <italic>p</italic>CO<sub>2</sub> levels at night due to respiration.</p>
<p>Due to the sponge&#x00027;s energetic dependence on photosynthates for enhanced bioerosion activity, the capacity of phototrophic sponges to excavate may be particularly sensitive to environmental changes impacting photosynthesis. Our results suggest that photosynthesis is enhanced with increased <italic>p</italic>CO<sub>2</sub> (Figure <xref ref-type="fig" rid="F6">6</xref>), possibly due to a switch from <inline-formula><mml:math id="M15"><mml:msubsup><mml:mrow><mml:mtext>HCO</mml:mtext></mml:mrow><mml:mrow><mml:mn>3</mml:mn></mml:mrow><mml:mrow><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:math></inline-formula> to CO<sub>2</sub> uptake. Fang et al. (<xref ref-type="bibr" rid="B20">2014</xref>) describes a greater supply of photosynthetic products from symbionts in the &#x0201C;reduced emissions&#x0201D; scenario (<italic>p</italic>CO<sub>2</sub> &#x0003D; 645 &#x003BC;atm, temperature &#x0003D; 28.4&#x000B0;C) to meet higher metabolic demands. Photosynthetic products by symbionts may be used for biosynthesis and respiration by the zooxanthellae or transferred to the associated sponge where it is used for metabolic maintenance via respiration or growth (Fang et al., <xref ref-type="bibr" rid="B20">2014</xref>).</p>
<p>Despite enhanced photosynthetic rates with rising <italic>p</italic>CO<sub>2</sub>, day-time chemical rates did not seem to benefit from this boost in energy supply as they were found to be comparable and even lower than night-time rates. The relationship between the sponge and its symbionts regarding bioerosional processes seems to change at higher <italic>p</italic>CO<sub>2</sub>. We hypothesize that the increase in local pH associated with enhanced photosynthesis may be too large to be balanced out by local respiration acidification. In other words, the increased photosynthetic activity may have an antagonistic effect with respect to acidification during day-time due to higher uptake of CO<sub>2</sub> by the symbionts. Borges and Gypens (<xref ref-type="bibr" rid="B1">2010</xref>) argued that the effect of enhanced primary production on carbon cycling can counter the effect of ocean acidification. Increased respiration might stimulate primary production by increased translocation of CO<sub>2</sub> of the sponge to the symbionts. The antagonistic behavior of trends observed between respiration at night and net respiration during the day with rising <italic>p</italic>CO<sub>2</sub>, is attributed to enhanced photosynthesis resulting in greater CO<sub>2</sub> fixation by photosymbionts.</p>
<p>Furthermore, competition for dissolved inorganic carbon species may occur between bioerosion and photosynthetic activity by the symbionts.</p>
</sec>
<sec>
<title>Comparison and extrapolation of bioerosion rates</title>
<p>Estimates of chemical and mechanical bioerosion for <italic>C. caribbaea</italic> are comparable to those calculated for <italic>C. orientalis</italic> under a range of CO<sub>2</sub> concentrations (Fang et al., <xref ref-type="bibr" rid="B17">2013a</xref>; Wisshak et al., <xref ref-type="bibr" rid="B71">2013</xref>, <xref ref-type="bibr" rid="B70">2014</xref>). This is consistent with the membership of <italic>C. caribbaea</italic> to the <italic>Cliona viridis</italic>-complex (Sch&#x000F6;nberg, <xref ref-type="bibr" rid="B58">2002</xref>). Our chemical rates ranged from 0.06 to 0.15 mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup> from present day to business-as-usual <italic>p</italic>CO<sub>2</sub> levels. Estimates by Fang et al. (<xref ref-type="bibr" rid="B17">2013a</xref>) ranged from 0.08 to 0.3 mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup> while rates by Wisshak et al. (<xref ref-type="bibr" rid="B70">2014</xref>) ranged from 0.02 to 0.26 mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup>. Mechanical rates from Fang ranged from 0.12 to 0.16 mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup> whilst our results ranged from 0.23 to 0.5 mg cm<sup>&#x02212;2</sup> day<sup>&#x02212;1</sup> (in E1). Total bioerosion rates from this study were nearly three times higher than those of Fang et al. (<xref ref-type="bibr" rid="B17">2013a</xref>) and Wisshak et al. (<xref ref-type="bibr" rid="B70">2014</xref>). Discrepancies between results can be attributed to differences in the methodology and calculations between these experiments. For instance, Wisshak et al. (<xref ref-type="bibr" rid="B70">2014</xref>) only conducted dark incubations which would explain the relatively low rates at ambient <italic>p</italic>CO<sub>2</sub>. These inconsistencies in the methodology between experiments are complicating comparison between results from different studies. Therefore, there is a need for method standardization regarding sponge bioerosion rates experiments. In addition, incubation methods are affecting sponges and are preventing accurate determination of rates. Up to now, closed incubations have been sufficient to observe relative variation between pCO<sub>2</sub>, temperature and eutrophication treatments. This sheds light on how boring sponges may react to future environmental changes. However, if we are to quantify such reaction, it is essential that rates are more accurately measured. Using semi enclosed incubation chambers may increase accuracy of chemical rates greatly. As the method involved in quantifying mechanical bioerosion rates is regarded as untrustworthy, collection of chips should be applied to a longer stretch in time.</p>
<p>Extrapolations should be treated with caution as it is an enormous jump to go from 6 h incubations to yearly estimates (McElhany, <xref ref-type="bibr" rid="B46">2016</xref>), especially considering how seasonality and therefore different irradiance levels of light may impact bieoerosion rates of photosymbiotic sponges. Still, when extrapolating chemical bioerosion rates from our experiment to yearly estimates, rates in the present-day (PD) <italic>p</italic>CO<sub>2</sub> scenario and in the business as usual (BU) scenario ranged from 0.22 to 0.55 kg m<sup>&#x02212;2</sup> year<sup>&#x02212;1</sup> in E1 and from 0.40 to 0.84 kg m<sup>&#x02212;2</sup> year<sup>&#x02212;1</sup> in E3. This corresponds to a doubling of rates by the end of this century. Even in a slightly more optimistic scenario, where CO<sub>2</sub> emissions are reduced, chemical bioerosion rates would increase by 50% compared to present rates. However, combined effects of <italic>p</italic>CO<sub>2</sub> and eutrophication, result in rates ranging from 0.22 kg m<sup>&#x02212;2</sup> year<sup>&#x02212;1</sup> in PD: E1 to 0.84 kg m<sup>&#x02212;2</sup> year<sup>&#x02212;1</sup> in BU: E3 which nearly corresponds to a quadrupling in chemical bioerosion rates.</p>
</sec>
</sec>
<sec sec-type="conclusions" id="s5">
<title>Conclusions</title>
<p>Considering ongoing ocean acidification, combined with increasing coastal eutrophication around Caribbean islands, these finding suggests that sponge bioerosion will increase in the next century. The combined effect of OA and eutrophication on bioerosional activity was not synergetic but additive. Enhanced bioerosion in future oceans together with reduced calcifying potential of corals will inevitably tip the balance between reef accretion and bioerosion processes toward net loss of carbonate structure.</p>
<p>Results from our incubation experiments increases our understanding of the effect of symbionts on bioerosional activity. Greater chemical bioerosion during the day at low and ambient <italic>p</italic>CO<sub>2</sub> suggest that the energy gained by photosynthetic activity is fueling a high fraction of the metabolic cost at the site of erosion which may include ATP usage for active Ca<sup>2&#x0002B;</sup> and/or active proton pumping. At higher <italic>p</italic>CO<sub>2</sub>, enhanced photosynthesis appears to have an antagonistic effect with respect to acidification due to higher uptake of CO<sub>2</sub> by the symbionts. Finally, our results stress the need to explore in more detail the role of light on the regulation of photosymbiotic sponge bioerosion rates.</p>
</sec>
<sec id="s6">
<title>Author contributions</title>
<p>Data collection: AW and DdB; Data analysis: AW; Interpretation of the data: AW, SvH, DdB, FvD, GR, and LdN; Drafting work: AW; Critical revision: FvD, SvH, GR, and LdN; Final approval: AW, SvH, DdB, FvD, GR, and LdN; Agreement to be accountable for all aspects of the work AW, SvH, DdB, FvD, GR, and LdN.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</sec>
</body>
<back>
<ack>
<p>We would like to thank two reviewers for their constructive comments which improve the initial manuscript. We thank the Caribbean Netherlands Science Institute (CNSI) for hosting the experiment and especially Johan Staple for his support. We also thank Masru Spanner for the nutrient analyses and Santiago Gonzalez for the dissolved organic carbon analyses and Paul Peters for field assistance. Bob Koster is gratefully acknowledged for the design and development of the <italic>p</italic>CO<sub>2</sub> set-up just as the NIOZ workshop whose help and work was crucial for the construction of the experimental set-up. This work is supported by the Gravitation grant NESSC from the Dutch Ministry of Education, Culture and Science. External funding for this project was provided by the Netherlands Organization for Scientific Research (NWO grants 858.14.021 and 858.14.022).</p>
</ack>
<sec sec-type="supplementary-material" id="s7">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="http://journal.frontiersin.org/article/10.3389/fmars.2017.00311/full#supplementary-material">http://journal.frontiersin.org/article/10.3389/fmars.2017.00311/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="DataSheet1.DOCX" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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