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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2025.1596802</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Focal adhesion kinase plays an essential role in Th17 cell differentiation by stimulating NF-&#x3ba;B signaling</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Kim</surname>
<given-names>Hyeong Su</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
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<role content-type="https://credit.niso.org/contributor-roles/formal-analysis/"/>
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</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Lee</surname>
<given-names>Ji Hyeon</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/3066556/overview"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Sohn</surname>
<given-names>Hyogon</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Lee</surname>
<given-names>Woo Ho</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1899344/overview"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Kim</surname>
<given-names>Ga Eul</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/investigation/"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Lee</surname>
<given-names>Wonyong</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/3067671/overview"/>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Kim</surname>
<given-names>Hang-Rae</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/methodology/"/>
<role content-type="https://credit.niso.org/contributor-roles/resources/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Lee</surname>
<given-names>Gap Ryol</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1899172/overview"/>
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<aff id="aff1">
<sup>1</sup>
<institution>Department of Life Science, Sogang University</institution>, <addr-line>Seoul</addr-line>,&#xa0;<country>Republic of Korea</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Center for Viral Immunology, Institute for Basic Science</institution>, <addr-line>Daejeon</addr-line>,&#xa0;<country>Republic of Korea</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Samsung Precision Genome Medicine Institute, Research Institute for Future Medicine, Samsung Medical Center</institution>, <addr-line>Seoul</addr-line>,&#xa0;<country>Republic of Korea</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Department of Health Sciences and Technology, Samsung Advanced Institute for Health Sciences &amp; Technology (SAIHST), Sungkyunkwan University</institution>, <addr-line>Seoul</addr-line>,&#xa0;<country>Republic of Korea</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/288846/overview">Hyun Park</ext-link>, National Cancer Institute (NIH), United States</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2960492/overview">Jeniffer Hernandez</ext-link>, Keck Graduate Institute of Applied Life Sciences, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/353231/overview">Harumichi Ishigame</ext-link>, Kansai Medical University, Japan</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Gap Ryol Lee, <email xlink:href="mailto:grlee@sogang.ac.kr">grlee@sogang.ac.kr</email>
</p>
</fn>
<fn fn-type="equal" id="fn003">
<p>&#x2020;These authors have contributed equally to this work</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>19</day>
<month>09</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>16</volume>
<elocation-id>1596802</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>03</month>
<year>2025</year>
</date>
<date date-type="accepted">
<day>02</day>
<month>09</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Kim, Lee, Sohn, Lee, Kim, Lee, Kim and Lee.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Kim, Lee, Sohn, Lee, Kim, Lee, Kim and Lee</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>T helper type 17 (Th17) cells play critical roles in the pathogenesis of various autoimmune and inflammatory diseases; however, signaling pathways that affect Th17 cell differentiation are not fully understood. Here, we investigated whether focal adhesion kinase (FAK), an integrator of extracellular signals, regulates differentiation of Th17 cells. The findings reveal that <italic>Fak</italic> deficiency in CD4 T cells significantly reduces Th17 differentiation, while also promoting regulatory T (Treg) cell differentiation, thereby ameliorating symptoms of experimental autoimmune encephalomyelitis (EAE). Mechanistically, <italic>Fak</italic> deficiency inhibited nuclear translocation of the NF-&#x3ba;B subunit RelA, thereby reducing the binding of RelA to the promoter region of <italic>Il17a</italic>. Moreover, pharmacological inhibition of FAK with the specific inhibitor PND1186 prevented Th17 differentiation <italic>in vitro</italic>, and reduced EAE symptoms <italic>in vivo</italic>. Thus, FAK plays an essential role in Th17 cell differentiation by stimulating NF-&#x3ba;B signaling.</p>
</abstract>
<kwd-group>
<kwd>FAK</kwd>
<kwd>Th17</kwd>
<kwd>NF-&#x3ba;B</kwd>
<kwd>T helper differentiation</kwd>
<kwd>EAE</kwd>
</kwd-group>
<contract-num rid="cn001">RS-2022-NR068982</contract-num>
<contract-sponsor id="cn001">National Research Foundation of Korea<named-content content-type="fundref-id">10.13039/501100003725</named-content>
</contract-sponsor>
<counts>
<fig-count count="7"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="81"/>
<page-count count="16"/>
<word-count count="8782"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>T Cell Biology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>CD4 T cells play a vital role in host defense against invading pathogens. Na&#xef;ve CD4 T cells are stimulated by antigen-presenting cells (APCs) presenting antigens with major histocompatibility complex II (MHCII) and provide co-stimulatory molecules and various cytokines (<xref ref-type="bibr" rid="B1">1</xref>). When activated, na&#xef;ve CD4 T cells differentiate into different subsets, including T helper type 1 (Th1), Th2, Th17, and Treg cells (<xref ref-type="bibr" rid="B2">2</xref>&#x2013;<xref ref-type="bibr" rid="B5">5</xref>). Among these, Th17 cells produce IL-17A, IL-17F, and IL-22, which play critical roles in mediating immune responses against extracellular pathogens (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B7">7</xref>). However, Th17 cells contribute to various autoimmune diseases, including multiple sclerosis (MS), psoriasis, and rheumatoid arthritis (<xref ref-type="bibr" rid="B8">8</xref>&#x2013;<xref ref-type="bibr" rid="B11">11</xref>). Differentiation of Th17 cells relies on cytokines such as IL-6, IL-1&#x3b2;, TNF&#x3b1;, and TGF&#x3b2;. Among these, IL-6 is of particular importance because it activates STAT3 (<xref ref-type="bibr" rid="B12">12</xref>), eventually leading to expression of ROR&#x3b3;T, the key lineage-determining transcription factor of Th17 cells (<xref ref-type="bibr" rid="B13">13</xref>).</p>
<p>In addition to cytokines, CD4 T cell differentiation pathways can also be affected by other signals, including the strength of the T cell receptor (TCR), binding to costimulatory molecules, various metabolic pathways, and the microbiota (<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B14">14</xref>). Sensing extracellular environmental cues is also crucial for regulating CD4 T cell differentiation and function. One such mediator of these signals is focal adhesion kinase (FAK, also known as PTK2), a non-receptor protein-tyrosine kinase that plays a major role in intracellular signal transduction (<xref ref-type="bibr" rid="B15">15</xref>). Originally identified as a protein kinase involved in mediating signals at the point of focal adhesion, FAK regulates cell migration and adhesion (<xref ref-type="bibr" rid="B15">15</xref>). Recent studies indicate that FAK functions as a scaffold protein, integrating various signals (<xref ref-type="bibr" rid="B16">16</xref>). FAK comprises three domains: the N-terminal four-point ezrin/radixin/moesin (FERM) domain, the C-terminal focal adhesion targeting (FAT) domain, and the kinase domain (<xref ref-type="bibr" rid="B17">17</xref>). Activation of FAK occurs when integrins bind to the extracellular matrix or endothelial cell surface, leading to phosphorylation of the Y397 residue of FAK, which is located in the linker region between the FERM and kinase domains. Phosphorylation of other residues by Src family kinases such as Src, Lck, and Fyn, further enhances FAK activity (<xref ref-type="bibr" rid="B18">18</xref>&#x2013;<xref ref-type="bibr" rid="B20">20</xref>); thus, FAK integrates signals from the extracellular environment and mediates processes such as cell migration, cell adhesion, and cytoskeleton reorganization (<xref ref-type="bibr" rid="B21">21</xref>, <xref ref-type="bibr" rid="B22">22</xref>).</p>
<p>Among immune cells, FAK mediates the activity of macrophages (<xref ref-type="bibr" rid="B23">23</xref>) and neutrophils (<xref ref-type="bibr" rid="B24">24</xref>). Additionally, studies have highlighted the close relationship between FAK and T cell activation (<xref ref-type="bibr" rid="B25">25</xref>&#x2013;<xref ref-type="bibr" rid="B28">28</xref>). However, the role of FAK during T cell activation remains controversial, with one study reporting that FAK negatively regulates T cell activation (<xref ref-type="bibr" rid="B29">29</xref>), while another shows that FAK promotes it (<xref ref-type="bibr" rid="B30">30</xref>). A recent study also suggests that FAK mediates TCR-independent and extracellular matrix-mediated sensitization of T cell activation (<xref ref-type="bibr" rid="B28">28</xref>). Furthermore, a specific isotype of integrin, integrin &#x3b1;3, promotes Th17 cell differentiation by bolstering the immunological synapse and enhances Th17 cell migration through the blood-brain barrier during brain inflammation (<xref ref-type="bibr" rid="B31">31</xref>). Taken together, these results suggest that FAK may integrate signals generated by the extracellular environment, thereby affecting T cell differentiation. This led us to investigate the role of FAK during differentiation of CD4 T cells.</p>
<p>The NF-&#x3ba;B pathway is triggered by TCR signaling. Upon stimulation of CD4 T cells by APCs through the TCR, the activation signal is transduced through multiple components, ultimately leading to activation of transcription factors NF-&#x3ba;B (<xref ref-type="bibr" rid="B32">32</xref>), NFAT (<xref ref-type="bibr" rid="B33">33</xref>), and AP-1 (<xref ref-type="bibr" rid="B34">34</xref>). These factors drive proliferation and differentiation of CD4 T cells. The NF-&#x3ba;B pathway has two branches: canonical and noncanonical. The NF-&#x3ba;B family comprises five proteins: p65 (RelA), c-Rel, RelB, NF&#x3ba;B1 (p105/p50), and NF&#x3ba;B2 (p100/p52) (<xref ref-type="bibr" rid="B35">35</xref>). Typically, TCR signaling triggers the canonical pathway, thereby activating the p65 (or c-Rel)/p50 complex, which translocates to the nucleus and induces the expression of various genes necessary for T cell activation.</p>
<p>Here, we used a retrovirus-mediated Cre transduction system (<italic>in vitro</italic>) and Th17-specific <italic>Fak</italic>-deficient mice to investigate the role of FAK during Th17 cell differentiation. Our findings reveal that deletion of <italic>Fak</italic> inhibits differentiation of Th17 cells by blocking the NF-&#x3ba;B pathway. Th17-specific <italic>Fak</italic>-deficiency ameliorated symptoms of experimental autoimmune encephalomyelitis (EAE) and blocked differentiation of Th17 cells <italic>in vivo</italic>. Moreover, the specific FAK inhibitor PND1186 effectively prevented Th17 cell differentiation <italic>in vitro</italic>, and alleviated EAE symptoms <italic>in vivo</italic>. Taken together, these results strongly suggest that FAK plays a crucial role in Th17 differentiation by activating the NF-&#x3ba;B pathway.</p>
</sec>
<sec id="s2" sec-type="results">
<title>Results</title>
<sec id="s2_1">
<title>FAK is required for Th17 cell differentiation</title>
<p>To investigate the role of FAK in CD4 T cells, we first measured <italic>Fak</italic> expression in different CD4 T cell subsets. Na&#xef;ve CD4 T cells were isolated from the spleens of C57BL/6 mice and cultured for 3 days under specific subset-polarizing conditions. FAK expression was highest at both mRNA and protein levels in Th17 cells among the various subsets (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1A</bold>
</xref>). Next, we explored the effect of FAK on CD4 T cell differentiation using a gene deletion system. We isolated na&#xef;ve CD4 T cells from Fak<sup>fl/fl</sup> mice and introduced a Cre-expressing retroviral vector (RV-Cre) into the cells to induce gene deletion (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>). We examined the effect of FAK deficiency on CD4 T cell differentiation by stimulating the control or RV-Cre-transduced cells under various subset-polarizing conditions. Since RV-Cre contains a GFP-coding sequence (<xref ref-type="bibr" rid="B36">36</xref>), the transduced cells can be identified by fluorescence during FACS analysis. Deletion of <italic>Fak</italic> reduced Th17 cell differentiation and slightly increased Treg cell differentiation (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1C</bold>
</xref>). Differentiation into Th1 and Th2 cells was not affected. These results suggest that FAK specifically affects Th17 cell differentiation.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>FAK is highly expressed in and required for Th17 cells. <bold>(A)</bold> Na&#xef;ve CD4 T cells were cultured under each subset differentiation conditions for 3 days. The transcript level of <italic>Fak</italic> was measured by RT-qPCR (left) and the protein level of FAK was measured by immunoblot analysis (right). <bold>(B, C)</bold> Na&#xef;ve CD4 T cells from <italic>Fak</italic>
<sup>fl/fl</sup> mice were introduced with a control empty vector (control) or a CRE recombinase-expressing vector (RV-Cre) to induce <italic>Fak</italic> deletion and cultured under Th17-polarizing conditions for 3 days <bold>(B)</bold> or various subset-polarizing conditions <bold>(C)</bold> for 3 days. <bold>(B)</bold> GFP+ cells were sorted. The transcript level of <italic>Fak</italic> was measured by RT-qPCR (left) and the protein level of FAK was measured by immunoblot analysis (right). <bold>(C)</bold> The expression of GFP, IFN-&#x3b3;, IL-4, IL-17A, and FOXP3 was analyzed by flow cytometry (top). The statistical analysis was performed on pooled data from five independent experiments (bottom). Error bars represent the standard deviation. The significance of differences between groups was determined by one-way ANOVA <bold>(A)</bold> and Student <italic>t</italic> test <bold>(B, C)</bold>. ***P &lt; 0.001; ****P &lt; 0.0001, n.s., not significant.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g001.tif">
<alt-text content-type="machine-generated">Bar graphs, Western blot results, and flow cytometry plots analyze FAK expression across T-cell subtypes. Graph A shows FAK/GAPDH ratios in Th1, Th2, Th17, and Treg cells, with Th2 showing significant elevation. Graph B compares FAK expression in control and RV-Cre groups, with a marked decrease in RV-Cre. The flow cytometry plots in panel C show different cytokine expressions (IFN-&#x3b3;, IL-4, IL-17A, FOXP3) in control versus RV-Cre groups. Fold change graphs at the bottom represent changes in cytokine/GFP positive cells, with significant differences in IL-17A and FOXP3.</alt-text>
</graphic>
</fig>
<p>To further investigate the role of FAK in Th17 and Treg cell differentiation, we measured subset-specific genes in sorted GFP+ cells from control and RV-Cre-transduced cells using flow cytometry and reverse transcription quantitative polymerase chain reaction (RT-qPCR). <italic>Fak</italic>-deficiency reduced expression of IL-17A, while that of FOXP3 increased markedly in Th17 cells (<xref ref-type="fig" rid="f2">
<bold>Figures&#xa0;2A, B</bold>
</xref>). The transcript levels of <italic>Rorc</italic> and <italic>Il23r</italic> also decreased in RV-Cre-transduced Th17 cells (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>). Additionally, to examine whether FAK has the same effect on pathogenic Th17 cells, we stimulated RV-Cre-transduced CD4 T cells under pathogenic Th17-polarizing conditions and measured expression of <italic>Il17a</italic> and <italic>Foxp3</italic> (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S1</bold>
</xref>). Consistent with data from conventional Th17 cells, <italic>Fak</italic>-deficient pathogenic Th17 cells showed reduced expression of <italic>Il17a</italic>, but increased expression of <italic>Foxp3</italic>. To further confirm the effects of FAK in Th17 cells, we used an shRNA-mediated knockdown method. ShRNA-mediated knockdown of FAK (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2C</bold>
</xref>) reduced expression of <italic>Il17a</italic> (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2D</bold>
</xref>), but increased that of <italic>Foxp3</italic> (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S2</bold>
</xref>). Taken together, these data indicate that FAK is required for Th17 cell differentiation <italic>in vitro</italic>.</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>FAK affects Th17 cell differentiation program. <bold>(A, B)</bold> Na&#xef;ve CD4 T cells from <italic>Fak</italic>
<sup>fl/fl</sup> mice were cultured and sorted as <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>. <bold>(A)</bold> IL-17A+ and FOXP3+ cells were measured by flow cytometry. <bold>(B)</bold> Transcript levels of <italic>Il17a</italic>, <italic>Rorc</italic>, <italic>Il23r</italic>, and <italic>Foxp3</italic> were measured by RT-qPCR. <bold>(C, D)</bold> Na&#xef;ve CD4 T cells were introduced with either the control vector (MSCV-LMP) or <italic>Fak</italic> shRNA vectors (#1, #2, and #3) and cultured under Th17-polarizing conditions for 3 days. <bold>(C)</bold> The transcript level of <italic>Fak</italic> was measured by RT-qPCR (left) and protein level of FAK was measured by immunoblot analysis (right). <bold>(D)</bold> IL-17A+ cells among the vector-transduced cells (GFP+) were measured by flow cytometry (left). GFP+ cells were sorted and the transcript level of <italic>Il17a</italic> was measured by RT-qPCR (right). All of RT-qPCR data were normalized to <italic>Gapdh</italic>. <bold>(E&#x2013;G)</bold> Na&#xef;ve CD4 T cells were transduced with control or RV-Cre and cultured under Th17-polarizing conditions for 3 days. GFP+ cells were sorted and subjected to RNA-seq analysis. <bold>(E)</bold> Scatter plot of RNA-seq data. <bold>(F)</bold> Gene ontology analysis of differentially expressed genes (DEGs) from control and RV-Cre-transduced Th17 cells. <bold>(G)</bold> Heatmap of immune/inflammatory response-related genes among the DEGs from control and RV-Cre-transduced Th17 cells. All of RT-qPCR data were normalized to <italic>Gapdh</italic>. Data in <bold>(A&#x2013;D)</bold> are pooled from three independent experiments. Error bars represent the standard deviation. The significance of differences between groups was determined by Student <italic>t</italic> test. **P &lt; 0.01; ***P &lt; 0.001; ****P &lt; 0.0001.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g002.tif">
<alt-text content-type="machine-generated">Panel A shows flow cytometry dot plots comparing IL-17A and FOXP3 expression between Control and RV-Cre groups. Bar graphs display increased percentages of IL-17A+ and FOXP3+ cells in RV-Cre. Panel B presents bar graphs showing gene expression data (Il17a, Rorc, Il23r, Foxp3) with significant changes in RV-Cre. Panel C displays a bar graph and western blot showing reduced Fak expression in three experimental groups. Panel D presents flow cytometry dot plots and a bar graph showing Il17a expression across different experimental groups. Panel E is a scatter plot showing gene expression differences in RV-Cre versus control Th17 cells, highlighting upregulated and downregulated genes. Panel F is a bar graph illustrating gene ontology categories with up and down counts and p-values. Panel G is a heatmap comparing gene expression in Control versus RV-Cre across several genes, indicating expression levels from minimum to maximum.</alt-text>
</graphic>
</fig>
<p>Next, we conducted RNA-sequencing (RNA-seq) to identify altered genes in RV-Cre-transduced (GFP+) Th17 cells (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2E</bold>
</xref> and GEO accession # GSE298541). Expression of 1,720 genes increased, while that of 1,489 genes decreased, in RV-Cre-transduced Th17 cells compared with control Th17 cells (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2E</bold>
</xref>). Gene ontology analysis revealed significant changes in multiple biological processes in RV-Cre-transduced Th17 cells, including &#x201c;cell cycle&#x201d;, &#x201c;cell development&#x201d;, &#x201c;nuclear division&#x201d;, &#x201c;locomotion&#x201d;, and &#x201c;immune response&#x201d; (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2F</bold>
</xref>). Moreover, differentially expressed gene analysis, focusing on genes related to immune or inflammatory responses (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2G</bold>
</xref>), revealed that expression of Th17-related genes such as <italic>Il17a</italic>, <italic>Il17f</italic>, <italic>Rorc</italic>, and <italic>Cysltr1</italic> (<xref ref-type="bibr" rid="B37">37</xref>) by RV-Cre-transduced Th17 cells decreased, while that of Treg-related genes such as <italic>Tnfrsf18</italic> and <italic>Tnfrsf4</italic> increased. Taken together, these data strongly suggest that FAK is expressed at high levels by Th17 cells, and essential for expression of signature genes associated with Th17 cells.</p>
</sec>
<sec id="s2_2">
<title>
<italic>Fak</italic> deficiency ameliorates the severity of EAE</title>
<p>To further investigate the role of FAK <italic>in vivo</italic>, we generated <italic>Fak</italic> conditional KO mice by crossing Fak<sup>fl/fl</sup> mice with transgenic mice expressing Cre recombinase under the control of the <italic>Rorc</italic> promoter (hereafter referred to as <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice). To assess the efficiency of <italic>Fak</italic> deletion in Th17 cells, we measured <italic>Fak</italic> mRNA expression across each polarized CD4 T cell subset. <italic>Fak</italic> expression was greatly reduced in Th17 cells, while it remained intact in other subsets (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S3</bold>
</xref>). Na&#xef;ve CD4 T cells from WT and <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice were stimulated under various polarizing conditions and their gene expression was measured by RT-qPCR. Expression of subset-specific markers by Th1 (<italic>Ifng</italic>), Th2 (<italic>Il4</italic>), and Treg (<italic>Foxp3</italic>) cells remained intact, regardless of <italic>Fak</italic> deletion (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>). Importantly, the level of <italic>Il17a</italic> mRNA (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>), and the percentage of IL-17A+ cells (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3B</bold>
</xref>), fell markedly in the <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> Th17 cell population compared with the control (WT) Th17 cell population.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>FAK deficiency ameliorates the severity of EAE. <bold>(A, B)</bold> Na&#xef;ve CD4 T cells from WT and <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice were cultured under polarizing conditions toward each different subset for 3 days. Transcript levels of <italic>Ifng</italic> for Th1 cells, <italic>Il4</italic> for Th2 cells, <italic>Il17a</italic> for Th17 cells, and <italic>Foxp3</italic> for Treg cells were measured by RT-qPCR <bold>(A)</bold> and the percentage of IL-17A+ cells under Th17-polarizing conditions was measured by flow cytometry <bold>(B)</bold>. <bold>(C)</bold> EAE was induced in control (WT, n = 10) and <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> (n = 10) mice as described in the Materials and Methods section. The symptoms of EAE were monitored every day and clinical scores were evaluated after EAE induction. <bold>(D, E)</bold> Histopathological analysis of lumbar spinal cords from control and <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice at the peak of the disease. <bold>(D)</bold> H&amp;E stained sections of spinal cords. Arrows indicate the inflammatory foci. <bold>(E)</bold> Immunohistochemical staining of myelin basic protein (MBP). Arrows indicate the more preserved myelin in <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice compared with control mice. <bold>(F)</bold> IL-17A+ and IFN&#x3b3;+ cells (left) and FOXP3+ cells (right) among CNS-infiltrating CD4 T cells were measured by flow cytometry. <bold>(G&#x2013;J)</bold> The percentage and absolute number of CNS-infiltrating mononuclear cells were measured. <bold>(G)</bold> CD4+ cells, <bold>(H)</bold> IL-17A+ cells, <bold>(I)</bold> IFN&#x3b3;+ cells, and <bold>(J)</bold> FOXP3+ cells. <bold>(K)</bold> Transcript levels of <italic>Il17a</italic>, <italic>Rorc</italic>, <italic>Il23r</italic>, <italic>Ifng</italic>, and <italic>Foxp3</italic> in CNS-infiltrating mononuclear cells were measured by RT-qPCR. Data were normalized to <italic>Gapdh</italic>. Data in <bold>(F&#x2013;K)</bold> are pooled from ten independent experiments. Error bars represent the standard deviation. The significance of differences between groups was determined by Student <italic>t</italic> test. *P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001; ****P &lt; 0.0001, n.s., not significant.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g003.tif">
<alt-text content-type="machine-generated">A multi-panel scientific figure displays data comparing Control (WT) and Fakfl/flRorccre conditions. Panels show various graphs and images: A) Bar graphs for gene expression (Ifng, Il4, Il17a, Foxp3). B) Flow cytometry plots and a bar graph for IL-17A and FOXP3 expression. C) Line graph of clinical scores over time. D and E) Histology images of spinal cords at different magnifications, highlighting differences. F) Flow cytometry plots for cytokine expression. G-K) Bar graphs depicting percentages and cell numbers for CD4, IL-17A, IFN&#x3b3;, and FOXP3. Statistical significance is indicated in multiple panels.</alt-text>
</graphic>
</fig>
<p>Next, we induced EAE, a Th17-driven model of MS (<xref ref-type="bibr" rid="B38">38</xref>, <xref ref-type="bibr" rid="B39">39</xref>), by immunizing both WT control and <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice with myelin oligodendrocyte glycoprotein (MOG35-55) peptide plus pertussis toxin. Clinical scores revealed that <italic>Fak</italic> deficiency attenuated autoimmune-related symptoms (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3C</bold>
</xref>). Histological examination of spinal cords using hematoxylin and eosin (H&amp;E) staining and myelin basic protein (MBP) immunohistochemistry revealed significantly less inflammatory cell infiltration and reduced myelin damage in <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3D, E</bold>
</xref>). Flow cytometry analysis of CD4 T cells infiltrating the central nervous system (CNS) (spinal cord) of control and <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice revealed that the percentage of IL-17A+ cells was lower in the CNS of <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3F</bold>
</xref>), while the percentage of FOXP3+ cells remained unchanged (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3F</bold>
</xref>). Furthermore, the percentage and number of CD4 cells and IL-17+ cells were reduced in the CNS-infiltrating mononuclear cells from <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice compared with the control mice (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3G, H</bold>
</xref>). The percentage of IFN&#x3b3;+ cells slightly increased but their number decreased (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3I</bold>
</xref>). The percentage of Foxp3+ cells remained unchanged, but their number decreased (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3J</bold>
</xref>). We also measured expression of various signature genes in CNS-infiltrating mononuclear cells by RT-qPCR. The findings revealed that cells from <italic>Fak<sup>fl/fl</sup>Rorc<sup>cre</sup>
</italic> mice showed lower expression of Th17 signature genes such as <italic>Il17a</italic>, <italic>Rorc</italic>, and <italic>Il23r</italic>, as well as the Th1-related gene <italic>Ifng</italic>, with no alteration in expression of <italic>Foxp3</italic> (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3K</bold>
</xref>). Collectively, these data demonstrate that FAK plays a critical role in an animal model of Th17-mediated autoimmune diseases.</p>
</sec>
<sec id="s2_3">
<title>FAK regulates the STAT3 signaling pathway in Th17 cells</title>
<p>Next, to assess the time-dependent kinetics of <italic>Fak</italic> expression in Th17 cells, we cultured na&#xef;ve CD4 T cells for 3 days under Th17-polarizing conditions and harvested them at different time points. We then measured the levels of <italic>Fak</italic> transcripts, as well as those of Th17 signature genes, using Th0 cells as a control (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4A</bold>
</xref>). <italic>Fak</italic> expression was induced after 18 h of cultivation, and was highest at 24 h. Expression of <italic>Rorc</italic>, <italic>Il17f</italic>, and <italic>Il17a</italic> peaked at 18, 24, and 48 h, respectively. The level of <italic>Rorc</italic> transcripts peaked at 18 h, followed by <italic>Il17f</italic>, <italic>Il17a</italic>, and <italic>Fak</italic>. ROR&#x3b3;T (encoded by <italic>Rorc</italic>), induced during the early differentiation stage, regulates expression of Th17 signature genes such as <italic>Il17a</italic>, <italic>Il17f</italic>, and <italic>Il23r</italic> (<xref ref-type="bibr" rid="B13">13</xref>). To test whether FAK expression is regulated by ROR&#x3b3;T, we introduced a <italic>Rorc</italic>-expressing vector into Th17 cells (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4B</bold>
</xref>). Ectopic expression of <italic>Rorc</italic> increased <italic>Il17a</italic> expression but had no effect on <italic>Fak</italic> expression in Th17 cells. We then assessed the effect of ROR&#x3b3;T functional inhibition using GSK805, a well-characterized ROR&#x3b3;T inhibitor (<xref ref-type="bibr" rid="B40">40</xref>). Consistent with a previous report (<xref ref-type="bibr" rid="B40">40</xref>), GSK805 markedly suppressed <italic>Il17a</italic> expression, whereas <italic>Fak</italic> expression remained unchanged (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4C</bold>
</xref>). These results suggest that FAK is not a direct downstream target of ROR&#x3b3;T.</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>FAK regulates the STAT3 signaling pathway in Th17 cells. <bold>(A)</bold> Na&#xef;ve CD4 T cells were cultured under various differentiation conditions for the indicated time periods and the transcript levels of <italic>Fak</italic>, <italic>Il17a</italic>, <italic>Rorc</italic>, and <italic>Il17f</italic> were measured by RT-qPCR. <bold>(B)</bold> Na&#xef;ve CD4 T cells were introduced with control vector or <italic>Rorc</italic>-expressing vector (<italic>Rorc</italic> O/X) and cultured in Th17-polarizing conditions for 3 days. Transcript levels of <italic>Rorc</italic>, <italic>Il17a</italic>, and <italic>Fak</italic> were measured by RT-qPCR. <bold>(C)</bold> Na&#xef;ve CD4 T cells were cultured under Th17-polarizing conditions with dose-dependent treatment of GSK805 for 3 days. Transcript levels of <italic>Il17a</italic> and <italic>Fak</italic> were measured by RT-qPCR. <bold>(D, E)</bold> Na&#xef;ve CD4 T cells from <italic>Fak</italic>
<sup>fl/fl</sup> mice were cultured as described in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref> and GFP+ cells were sorted. <bold>(D)</bold> Each protein level was measured by immunoblot analysis (left) and the ratios of pSTAT3/STAT3 and pSTAT5/STAT5 were calculated by densitometry (right). <bold>(E)</bold> Transcript level of <italic>Il2</italic> was measured by RT-qPCR (left) and the protein level of IL-2 from the supernatants was measured by ELISA (right). All of RT-qPCR data were normalized to <italic>Gapdh</italic>. Data in <bold>(A, B, D, E)</bold> were pooled from three independent experiments, and data in <bold>(C)</bold> from five. Error bars represent the standard deviation. The significance of differences between groups was determined by Student <italic>t</italic> test. **P &lt; 0.01; ***P &lt; 0.001; ****P &lt; 0.0001, n.s., not significant.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g004.tif">
<alt-text content-type="machine-generated">Graphs and a Western blot display the expression of genes and proteins under different conditions. Panel A shows time-course gene expression in Th17 and Th0 cells for Fak, Il17a, Rorc, and Il17f. Panel B illustrates fold change in Rorc, Il17a, and Fak with Rorc overexpression. Panel C shows Il17a and Fak fold change with varying GSK805 concentrations. Panel D presents Western blot results for STAT3, pSTAT3, STAT5, pSTAT5, and &#x3b2;-ACTIN, with graphs comparing their ratios in control and RV-Cre. Panel E shows increased Il2 expression and IL-2 concentration in RV-Cre compared to control.</alt-text>
</graphic>
</fig>
<p>STAT3 is a key signaling component for Th17 cell differentiation, and is activated by IL-6 (<xref ref-type="bibr" rid="B12">12</xref>). Once activated, STAT3 forms a homodimer with another STAT3 molecule and translocates into the nucleus to induce expression of Th17 signature genes. Typically, activation of STAT3 is triggered by JAK, located downstream of the IL-6 receptor (<xref ref-type="bibr" rid="B41">41</xref>); however, recent studies revealed that STAT3 can also be activated by direct interaction with FAK, in lymphatic endothelial cells and cancer cells (<xref ref-type="bibr" rid="B42">42</xref>&#x2013;<xref ref-type="bibr" rid="B44">44</xref>). To assess whether FAK affects activation of STAT3 in Th17 cells, we measured pSTAT3 levels in <italic>Fak</italic>-deficient Th17 cells. <italic>Fak</italic>-deficient Th17 cells showed decreased levels of pSTAT3, but increased levels of pSTAT5 (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4D</bold>
</xref>). As STAT3 and STAT5 act reciprocally, and IL-2 is a key cytokine required for STAT5 activation (<xref ref-type="bibr" rid="B45">45</xref>, <xref ref-type="bibr" rid="B46">46</xref>), we next examined expression of <italic>Il2</italic> in <italic>Fak</italic>-deficient Th17 cells to determine whether FAK affects the reciprocal roles of STAT3 and STAT5 (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4E</bold>
</xref>). <italic>Il2</italic> expression was elevated in <italic>Fak</italic>-deficient Th17 cells, along with pSTAT5 levels. Taken together, these data indicate that <italic>Fak</italic>-deficiency reduces activation of STAT3, but induces phosphorylation of STAT5 leading to IL-2 cytokine production by Th17 cells.</p>
</sec>
<sec id="s2_4">
<title>FAK regulates Th17 cell differentiation through the NF-&#x3ba;B pathway</title>
<p>The NF-&#x3ba;B pathway plays a crucial role in various biological processes in CD4 T cells, including survival, maintenance, and differentiation (<xref ref-type="bibr" rid="B47">47</xref>). In a resting state, NF-&#x3ba;B is located in the cytosol, where it is bound and masked by the inhibitor of NF-&#x3ba;B (I&#x3ba;B). Upon stimulation, I&#x3ba;B kinase (IKK) becomes activated and phosphorylates I&#x3ba;B, triggering its degradation. The released NF-&#x3ba;B then translocates to the nucleus and activates the expression of its target genes. Notably, NF-&#x3ba;B serves as a direct substrate for FAK (<xref ref-type="bibr" rid="B48">48</xref>), and FAK regulates activation of the NF-&#x3ba;B pathway in non-immune cells (<xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B50">50</xref>). Based on this knowledge, we formulated a hypothesis that FAK might affect Th17 cell differentiation through the NF-&#x3ba;B pathway. To test the hypothesis, we first examined the effect of <italic>Fak</italic> deficiency on the NF-&#x3ba;B pathway in Th17 cells. Upon stimulation with anti-CD3/CD28, the NF-&#x3ba;B pathway was activated in WT Th17 cells, but not in <italic>Fak</italic>-deficient Th17 cells (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>). Notably, cytosolic I&#x3ba;B levels did not change, and translocation of RelA into the nucleus decreased, in <italic>Fak</italic>-deficient Th17 cells compared with WT Th17 cells. Additionally, phosphorylation and degradation of I&#x3ba;B were downregulated (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>). It is noteworthy that the protein SOCS3 inhibits both the JAK/STAT (<xref ref-type="bibr" rid="B51">51</xref>, <xref ref-type="bibr" rid="B52">52</xref>) and NF-&#x3ba;B signaling pathways (<xref ref-type="bibr" rid="B53">53</xref>) by promoting protein degradation. Expression of SOCS3 at both the protein (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>) and RNA (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5B</bold>
</xref>) levels increased in <italic>Fak</italic>-deficient Th17 cells, suggesting disruption of both the STAT3 and NF-&#x3ba;B signaling pathways.</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>FAK regulates Th17 cell differentiation through the NF-&#x3ba;B pathway. <bold>(A)</bold> Na&#xef;ve CD4 T cells from <italic>Fak</italic>
<sup>fl/fl</sup> mice were transduced with control vector or RV-Cre and cultured under Th17-polarizing conditions for 3 days. GFP+ cells were sorted and rested in normal media for 2 days and serum-free medium for an additional 8 hours. The cells were restimulated with anti-CD3/CD28 antibodies for the indicated time periods, and nuclear/cytoplasmic extracts were prepared. Each protein level was measured by immunoblot analysis (right). The ratios of I&#x3ba;B/&#x3b2;-Actin, pI&#x3ba;B/&#x3b2;-Actin, and nuclear RelA/cytoplasmic RelA were calculated by densitometry (right). <bold>(B, C)</bold> Na&#xef;ve CD4 T cells from <italic>Fak</italic>
<sup>fl/fl</sup> mice were transduced with RV-Cre and cultured under Th17-polarizing conditions for 3 days <bold>(B)</bold> and 16 hours <bold>(C)</bold> and GFP+ cells were sorted. <bold>(B)</bold> Transcript level of <italic>Socs3</italic> was measured by RT-qPCR. <bold>(C)</bold> Relative RelA binding to each indicated locus was measured through ChIP assay. Nuclear extracts from cultured cells were reacted with an anti-RelA antibody, and precipitated DNA fragments were measured by qPCR. Isotype-matching IgG was used as a negative control. <bold>(D&#x2013;F)</bold> <italic>Il17a</italic> promoter activity was measured through luciferase assay. <bold>(D)</bold> EL4 cells were transfected with pGL3-<italic>Il17a</italic> promoter vector and control or <italic>Fak</italic> siRNA, and the cells were rested for 20 hours. After transfection, the cells were divided into non-stimulated or stimulated groups, with the stimulated groups received 4 hour stimulation with PMA/ionomycin. <bold>(E)</bold> EL4 cells were transfected with the pGL3-<italic>Il17a</italic> promoter vector and rested for 20 hours with or without PDTC treatment (1 &#x3bc;M). <bold>(F)</bold> EL4 cells were transfected as described in <bold>(D)</bold> and rested for 20 hours with 1 &#x3bc;M PDTC treatment. <bold>(G&#x2013;I)</bold> Na&#xef;ve CD4 T cells from <italic>Rela</italic>
<sup>fl/fl</sup> mice were introduced with a control empty vector (WT) or a Cre recombinase expressing vector (p65 KO) to induce <italic>Rela</italic> deletion and cultured under Th17-polarizing conditions for 3 days. <bold>(G)</bold> IL-17A+ and FOXP3+ cells were measured by flow cytometry. <bold>(H)</bold> GFP+ cells were sorted and transcript level of <italic>Rela</italic>, <italic>Il17a</italic>, <italic>Rorc</italic>, and <italic>Il23r</italic> were measured by RT-qPCR. <bold>(I)</bold> Na&#xef;ve CD4 T cells from <italic>Rela</italic>
<sup>fl/fl</sup> mice were cultured as described in <bold>(G)</bold> and additionally treated with vehicle (control) or FAK inhibitor (PND1186, 1 &#x3bc;M). IL-17A+ and FOXP3+ cells were measured by flow cytometry. RT-qPCR data in <bold>(B, H)</bold> were normalized to <italic>Gapdh</italic>. Data in <bold>(A&#x2013;I)</bold> are pooled from three independent experiments. Error bars represent the standard deviation. The significance of differences between groups was determined by Student <italic>t</italic> test. *P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001; ****P &lt; 0.0001.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g005.tif">
<alt-text content-type="machine-generated">The image contains a series of scientific panels labeled A to I. It shows various experimental results related to protein expression and gene activity. The panels include Western blot analyses, bar graphs, and flow cytometry plots. Panels A and B depict protein levels and gene expression comparisons between control and RV-Cre conditions. Panel C presents relative RNA expression levels among different samples. Panels D to F illustrate the IL17a promoter activity under different conditions, with significant differences labeled. Panels G to I display flow cytometry plots and bar graphs comparing wild type and Rela knockout conditions, including the effects of a FAK inhibitor.</alt-text>
</graphic>
</fig>
<p>Several STAT3 and NF-&#x3ba;B binding sites have been identified in the <italic>Il17a</italic> promoter and the intergenic regions between the <italic>Il17a</italic> and <italic>Il17f</italic> genes (<xref ref-type="bibr" rid="B54">54</xref>, <xref ref-type="bibr" rid="B55">55</xref>). These binding sites play a crucial role in transcriptional regulation of <italic>Il17a</italic> expression in response to various stimuli. Therefore, we conducted chromatin immunoprecipitation (ChIP) assays to investigate whether FAK affects binding of RelA to the regulatory regions of the <italic>Il17a</italic> and <italic>Il17f</italic> genes. We observed RelA binding to the promoter and distal regulatory regions of the <italic>Il17a</italic> gene including -5kb, +10kb, and +28kb regions (<xref ref-type="bibr" rid="B56">56</xref>, <xref ref-type="bibr" rid="B57">57</xref>), and the promoter and +5kb enhancer region of the <italic>Il17f</italic> gene in Th17 cells (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5C</bold>
</xref>); however, deletion of <italic>Fak</italic> led to a significant reduction in RelA binding to the <italic>Il17a</italic> promoter, whereas binding to the <italic>Il17f</italic> promoter remained unaltered (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5C</bold>
</xref>). Additionally, binding of RelA to the promoter of <italic>Socs3</italic> was also inhibited in <italic>Fak</italic>-deficient Th17 cells (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5C</bold>
</xref>). These results suggest that FAK regulates RelA binding to the <italic>Il17a</italic> and <italic>Socs3</italic> genes.</p>
<p>Next, to investigate the effect of FAK on activity of the <italic>Il17a</italic> promoter, we conducted a transient reporter assay. EL4 mouse thymoma cells were transfected with reporter constructs containing the <italic>Il17a</italic> promoter, with or without <italic>Fak</italic> siRNA, and then treated with phorbol 12-myristate 13-acetate (PMA) and ionomycin (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5D</bold>
</xref>). The results showed that the promoter activity of <italic>Il17a</italic> was significantly reduced upon siRNA-mediated knockdown of FAK expression (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5D</bold>
</xref>). A similar effect was observed after treatment with an NF-&#x3ba;B inhibitor (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5E</bold>
</xref>). To further explore the relationship between FAK and NF-&#x3ba;B during activation of the <italic>Il17a</italic> promoter, FAK-knockdown Th17 cells were exposed to an NF-&#x3ba;B inhibitor. Interestingly, the NF-&#x3ba;B inhibitor did not have any additional effects on reducing the activity of the <italic>Il17a</italic> promoter, suggesting that FAK and NF-&#x3ba;B are part of the same signaling pathway that regulates <italic>Il17a</italic> promoter activation (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5F</bold>
</xref>). To validate these findings, we used <italic>Rela</italic>-deficient cells. Na&#xef;ve CD4 T cells were isolated from Rela<sup>fl/fl</sup> mice and transduced with RV-Cre under Th17-polarizing conditions. The resulting <italic>Rela</italic>-deficient Th17 cells exhibited a significant reduction in IL-17A expression at both the protein (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5G</bold>
</xref>) and mRNA levels (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5H</bold>
</xref>). Expression of Th17-related genes <italic>Rorc</italic> and <italic>Il23</italic>r also decreased (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5H</bold>
</xref>). However, treatment with a specific FAK inhibitor PND1186, a pyridine reversible inhibitor of FAK (<xref ref-type="bibr" rid="B58">58</xref>), did not alter expression of IL-17A in <italic>Rela</italic>-deficient Th17 cells (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5I</bold>
</xref>). In summary, these results suggest that FAK plays a critical role in Th17 cell differentiation by facilitating recruitment of RelA, an NF-&#x3ba;B subunit, to the <italic>Il17a</italic> promoter and distal regulatory regions and stimulating the promoter activity.</p>
</sec>
<sec id="s2_5">
<title>FAK inhibitors block differentiation of Th17 cells <italic>in vitro</italic>
</title>
<p>The above results suggest that FAK regulates differentiation of Th17 cells, as well as Th17-mediated disorders. Therefore, we investigated whether FAK inhibitors prevent or treat diseases associated with Th17 cells. To assess the effect of FAK inhibitors on Th17 cell differentiation <italic>in vitro</italic>, we cultured na&#xef;ve CD4 T cells under Th17-polarizing conditions in the presence of varying concentrations of PND1186. Flow cytometry analysis revealed a dose-dependent reduction in expression of IL-17A, accompanied by an increase in FOXP3 expression (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>). Additionally, Treg cells generated by culturing na&#xef;ve CD4 T cells with PND1186 exhibited a slight increase in the FOXP3+ cell population (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6B</bold>
</xref>). The dose-dependent changes were confirmed by RT-qPCR to detect <italic>Il17a</italic> and <italic>Foxp3</italic> transcripts (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6C</bold>
</xref>). The increase of <italic>Foxp3</italic> mRNA levels was more pronounced than that in the percentage of FOXP3+ cell population (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6D</bold>
</xref>). To evaluate whether PND1186 affects Th17 cell death or proliferation, we performed Annexin V and 7-AAD staining to assess apoptosis and measured the Ki-67 expression level as an indicator of proliferative activity. Although a slight increase in apoptosis was observed at the highest concentration, overall cell death was comparable to that of the control (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S4A</bold>
</xref>). Therefore, the reduction in IL-17A+ cell frequency is unlikely to be due to apoptosis. Analysis of Ki-67 mean fluorescence intensity revealed only slightly reduced proliferation of Th17 cells across all inhibitor-treated conditions, suggesting that the effect of PND1186 on Th17 differentiation is not due to its influence on cell proliferation (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S4B</bold>
</xref>). These findings suggest that PND1186 modulates the balance between Th17 and Treg cells. To validate these results, we utilized an independent FAK inhibitor, GSK2256098 (<xref ref-type="bibr" rid="B59">59</xref>). Treatment with GSK2256098 also led to a dose-dependent reduction in IL-17A expression at both the protein and transcript levels under Th17-polarizing conditions, and an increase in FOXP3 expression under Treg-polarizing conditions (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S5</bold>
</xref>). Consistent with the effects observed in <italic>Fak</italic>-deficient cells (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4D</bold>
</xref>), treatment with PND1186 significantly reduced the amount of pSTAT3, but increased that of pSTAT5, in Th17 cells (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6E</bold>
</xref>). Moreover, PND1186 reduced I&#x3ba;B phosphorylation and degradation, thereby inhibiting nuclear translocation of RelA (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6F</bold>
</xref>), as well as binding of RelA to the <italic>Il17a</italic> and <italic>Il17f</italic> promoters and distal regulatory regions (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6G</bold>
</xref>). Collectively, these data indicate that specific FAK inhibitors downregulate the STAT3 and NF-&#x3ba;B signaling pathways, thereby repressing differentiation of Th17 cells <italic>in vitro</italic>.</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>A FAK inhibitor blocks differentiation of Th17 cells <italic>in vitro.</italic> <bold>(A&#x2013;E)</bold> Na&#xef;ve CD4 T cells were cultured under Th17- or Treg-polarizing conditions with dose-dependent treatment of PND1186 for 3 days. IL-17A+ and FOXP3+ cells were measured by flow cytometry <bold>(A)</bold> and transcript levels of <italic>Il17a</italic> and <italic>Foxp3</italic> were measured by RT-qPCR <bold>(C)</bold> in Th17 cells. FOXP3+ cells were measured by flow cytometry <bold>(B)</bold> and transcript level of <italic>Foxp3</italic> was measured by RT-qPCR <bold>(D)</bold> in Treg cells. <bold>(E&#x2013;G)</bold> Na&#xef;ve CD4 T cells were cultured under Th17-polarizing conditions with vehicle (control) or PND1186 (1 &#x3bc;M) treatment for 3 days <bold>(E, G)</bold> and the indicated time periods <bold>(F)</bold>. <bold>(E)</bold> pSTAT3 and pSTAT5 levels were measured by flow cytometry. <bold>(F)</bold> Nuclear or cytoplasmic extracts were prepared from cultured cells, and each protein level was measured by immunoblot analysis (right). The ratios of I&#x3ba;B/&#x3b2;-Actin, pI&#x3ba;B/&#x3b2;-Actin, and nuclear RelA/cytoplasmic RelA were calculated by densitometry (right). <bold>(G)</bold> Relative RelA binding to each indicated locus was measured through ChIP assay. Nuclear extracts from cultured cells were incubated with an anti-RelA antibody and the precipitated DNA fragments were measured by qPCR. An isotype-matching IgG was used as a negative control. RT-qPCR data in <bold>(C, D)</bold> were normalized to <italic>Gapdh</italic>. Data in <bold>(A&#x2013;G)</bold> are pooled from three independent experiments. Error bars represent the standard deviation. The significance of differences between groups was determined by Student <italic>t</italic> test. *P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001; ****P &lt; 0.0001.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g006.tif">
<alt-text content-type="machine-generated">Flow cytometry and Western blot analysis data are presented to assess the effects of PND1186 on IL-17A and FOXP3 expression in A and B panels. Bar graphs in A and B compare percentages of positive cells at different PND1186 concentrations. Panel C shows gene expression of Il17a and Foxp3. Panel D presents relative expression levels of Foxp3. Panel E displays histograms and mean fluorescence intensity for pSTAT3 and pSTAT5. Panel F features Western blots and corresponding graphs showing protein expression over time with CD3 and CD28 stimulation. Panel G includes a bar graph of relative ReIA binding with different treatments.</alt-text>
</graphic>
</fig>
</sec>
<sec id="s2_6">
<title>
<italic>In vivo</italic> administration of a FAK inhibitor attenuates the symptoms of EAE</title>
<p>To investigate the ability of a selective FAK inhibitor to inhibit the development of autoimmune diseases <italic>in vivo</italic>, we conducted experiments using an EAE model. EAE was induced in C57BL/6 mice, which were then treated daily with PND1186 (intraperitoneal injection; 50 mg/kg) or vehicle control. Remarkably, PND1186 protected mice from EAE, leading to a dramatic delay in disease onset and a notable reduction in disease severity (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7A</bold>
</xref>). Histological analysis with H&amp;E and Luxol fast blue staining revealed a marked reduction in inflammatory infiltration and demyelination in the spinal cord of PND1186-treated mice (<xref ref-type="fig" rid="f7">
<bold>Figures&#xa0;7B, C</bold>
</xref>). Flow cytometry analysis of the CNS-infiltrating (spinal cord) CD4 T cells revealed a remarkable decrease in the percentage and number of IL-17A+ cells and GM-CSF+ cells, but a slight increase in those of Foxp3+ cells, in PND1186-treated mice compared with those in control mice (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7D</bold>
</xref>). Furthermore, administration of PND1186 reduced the percentage and number of CD4 cells, IL-17A+ cells, IFN&#x3b3;+ cells, and GM-CSF+ cells among CNS-infiltrating mononuclear cells (<xref ref-type="fig" rid="f7">
<bold>Figures&#xa0;7E&#x2013;H</bold>
</xref>). The percentage, but not the number, of Treg cells in the CNS of PND1186-treated mice was higher than that in vehicle controls (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7I</bold>
</xref>). Additionally, PND1186 significantly reduced the ratio and number of CNS-infiltrating granulocytes, while the number of CD8 cells and macrophages fell only slightly (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure S6</bold>
</xref>). Consistent with the flow cytometry data, CNS-infiltrating mononuclear cells in PND1186-treated mice exhibited markedly lower levels of <italic>Il17a</italic>, <italic>Rorc</italic>, <italic>Il23r</italic>, and <italic>Ifng</italic> than those in control mice (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7J</bold>
</xref>). Conversely, these cells expressed higher level of <italic>Foxp3</italic> mRNA than control cells (<xref ref-type="fig" rid="f7">
<bold>Figure&#xa0;7J</bold>
</xref>). Taken together, these results indicate that the selective FAK inhibitor limits progression of EAE by suppressing Th17 differentiation.</p>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>
<italic>In vivo</italic> administration of a FAK inhibitor attenuates the symptoms of EAE. EAE was induced in C57BL/6 mice as described in the Materials and Methods section. Vehicle (control, n = 13) or PND1186 (50 mg/kg, n = 13) was administered every day from day 3 until the end of the experiments. <bold>(A)</bold> The symptoms of EAE were monitored daily, and clinical scores were evaluated after EAE induction. <bold>(B, C)</bold> Histopathological analysis of lumbar spinal cords from control or PND1186-treated mice at the peak of the disease. <bold>(B)</bold> H&amp;E stained sections of spinal cords. Arrows indicate the inflammatory foci. <bold>(C)</bold> Luxol fast blue stained sections of spinal cords. Arrows indicate the demyelinated foci. <bold>(D)</bold> IL-17A+ and IFN&#x3b3;+ cells (left), GM-CSF+ cells (middle), and FOXP3+ cells (right) among CNS-infiltrating CD4 T cells were measured by flow cytometry. <bold>(E&#x2013;I)</bold> The percentage and absolute number of CNS-infiltrated mononuclear cells were measured. <bold>(E)</bold> CD4+ cells, <bold>(F)</bold> IL-17A+ cells, <bold>(G)</bold> IFN&#x3b3;+ cells, <bold>(H)</bold> GM-CSF+ cells, and <bold>(I)</bold> FOXP3+ cells. <bold>(J)</bold> Transcript levels of <italic>Il17a</italic>, <italic>Rorc</italic>, <italic>Il23r</italic>, <italic>Ifng</italic>, and <italic>Foxp3</italic> in CNS-infiltrating mononuclear cells were measured by RT-qPCR. Data were normalized to <italic>Gapdh</italic>. Data in <bold>(E&#x2013;J)</bold> are pooled from seven independent experiments. Error bars represent the standard deviation. The significance of differences between groups was determined by Student <italic>t</italic> test. *P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001; ****P &lt; 0.0001, n.s., not significant.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-16-1596802-g007.tif">
<alt-text content-type="machine-generated">A multifaceted scientific figure illustrates the effects of Vehicle vs. PND1186 treatments. Panel A shows a line graph comparing clinical scores over time, with PND1186 showing lower scores. Panels B and C contain histological images of tissue sections stained with H&amp;E and LFB. Arrows point to changes in pathology in vehicle-treated samples. Panel D features flow cytometry plots comparing Vehicle and PND1186 effects on immune cell markers like IL-17A, GM-CSF, and FOXP3. Panels E to J present bar graphs analyzing percentages and cell numbers for various immune markers, showing significant differences between treatments.</alt-text>
</graphic>
</fig>
</sec>
</sec>
<sec id="s3" sec-type="discussion">
<title>Discussion</title>
<p>Here, we used genetic, molecular biological, and pharmacological methods to demonstrate that FAK, an integrator of extracellular environmental signals, acts as a key regulator of Th17 cell differentiation. The findings suggest that lack of <italic>Fak</italic> reduces expression of IL-17A, which is mediated by inhibition of the STAT3 and NF-&#x3ba;B pathways. Deficiency of <italic>Fak</italic> in the EAE model resulted in a marked reduction in Th17 cell numbers in the CNS, along with reduced EAE severity. Moreover, a pharmacological inhibitor of FAK effectively suppressed development of mouse Th17 cells both <italic>in vitro</italic> and <italic>in vivo</italic>. This suggests that FAK plays an essential role in Th17 cell differentiation by activating the STAT3 and NF-&#x3ba;B pathways.</p>
<p>In this study, we investigated the role of FAK during Th17 cell differentiation. The data highlight that FAK is a signaling molecule playing an essential role in Th17 cell differentiation by stimulating NF-&#x3ba;B pathway. Besides their role in focal adhesion, FAK serves as a scaffold integrating various signals (<xref ref-type="bibr" rid="B16">16</xref>). During T cell stimulation, interactions between TCR and FAK are facilitated by direct binding of FAK to Lck/Fyn and/or CD4 (<xref ref-type="bibr" rid="B60">60</xref>). Upon TCR activation in human CD4 T cells, several critical tyrosine residues within FAK, including Y397, Y567/577, and Y925, become phosphorylated (<xref ref-type="bibr" rid="B30">30</xref>). Additionally, FAK stimulates the PI3K/Akt and MAPK/ERK pathways, which are involved in survival, proliferation, and differentiation of some cancer cells (<xref ref-type="bibr" rid="B61">61</xref>). Furthermore, some studies have reported that FAK leads to specific phosphorylation of I&#x3ba;B kinase &#x3b1; (IKK&#x3b1;) (<xref ref-type="bibr" rid="B48">48</xref>). We also observed a decrease in the level of phosphorylated I&#x3ba;B in <italic>Fak</italic>-deficient T cells. Therefore, it seems that FAK is involved in a variety of signaling pathways in a context-dependent manner.</p>
<p>Beyond cell differentiation, FAK is involved in cell migration, adhesion, and mechanosensing (<xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B62">62</xref>, <xref ref-type="bibr" rid="B63">63</xref>). Consequently, it is plausible that some of these processes impact Th17 cell function <italic>in vivo</italic>. Previous studies demonstrate the involvement of FAK in the interaction between APCs and T cells. Adhesion receptors such as VLA-4, LFA-1, and CD44 promote contact between T cells and APCs or target cells in secondary lymphoid tissues or at inflammatory sites. These receptors also facilitate T cell activation (<xref ref-type="bibr" rid="B64">64</xref>, <xref ref-type="bibr" rid="B65">65</xref>). Notably, activation of the TCR, as well as LFA-1 or VLA-4, induces TCR-mediated phosphorylation of tyrosine in FAK (<xref ref-type="bibr" rid="B66">66</xref>, <xref ref-type="bibr" rid="B67">67</xref>). Additionally, CD44 physically associates with FAK in T lymphocytes, and its activation further enhances FAK activity (<xref ref-type="bibr" rid="B68">68</xref>). Moreover, studies show that inhibition of FAK phosphorylation correlates with impaired TCR-induced LFA-1 clustering and adhesion to ICAM-1 in Jurkat cells (<xref ref-type="bibr" rid="B69">69</xref>). <italic>Fak</italic>-deficient CD4 T cells exhibit slightly reduced adhesion to ICAM-1, leading to weakened T cell conjugation with APCs (<xref ref-type="bibr" rid="B70">70</xref>). In <italic>Fak</italic>-deficient Th17 cells, it is possible that they form fewer immunological synapses with APCs, resulting in a lack of effective priming. Further research is needed to fully elucidate the precise mechanisms by which FAK regulates Th17 cell function.</p>
<p>Recruitment of circulating lymphocytes to inflammatory tissues involves complex molecular interactions with the local vascular endothelium via cell adhesion molecules and chemokines (<xref ref-type="bibr" rid="B71">71</xref>). Chemokine receptor signaling activates integrins on the T cell surface, enabling T cells to adhere to and migrate across the vascular wall. Among the crucial integrins involved in this process are LFA-1, VLA-4 (&#x3b1;4&#x3b2;1), and &#x3b1;4&#x3b2;7. These integrins bind to their ligands ICAM-1 and VCAM-1 on the endothelium, thereby facilitating lymphocyte transmigration (<xref ref-type="bibr" rid="B71">71</xref>, <xref ref-type="bibr" rid="B72">72</xref>). At focal adhesions, FAK localizes and binds to the cytoplasmic tails of integrins. Consequently, FAK catalyzes several downstream signals that regulate cell adhesion and migration (<xref ref-type="bibr" rid="B73">73</xref>, <xref ref-type="bibr" rid="B74">74</xref>). Therefore, deletion of the <italic>Fak</italic> gene from the Th17 cells of EAE mice might affect the capacity of Th17 cells to migrate into the CNS. This, in turn, could contribute to a lower frequency and number of Th17 cells infiltrating the CNS, leading to the observed amelioration of EAE symptoms in our study. Similarly, inhibiting FAK signaling results in reduced neutrophil transmigration (<xref ref-type="bibr" rid="B24">24</xref>), and impairs the motility of macrophages (<xref ref-type="bibr" rid="B75">75</xref>). Therefore, the FAK inhibitor PND1186 may also inhibit migratory activity, not only of IL-17A-producing cells but also of other types of immune cell. This observation could potentially explain the greater effect observed after treatment with PND1186 compared to Th17-specific deletion of <italic>Fak</italic> in the EAE mouse model.</p>
<p>To determine whether FAK is regulated by ROR&#x3b3;T, we altered ROR&#x3b3;T activity through both ectopic overexpression and pharmacological inhibition. Under both conditions, <italic>Fak</italic> expression remained unchanged, indicating that FAK is not a direct downstream target of ROR&#x3b3;T. To explore the functional role of FAK during Th17 differentiation, we generated <italic>Fak</italic> conditional KO mice by crossing Fak<sup>fl/fl</sup> mice with <italic>Rorc</italic>-Cre mice. Although this system results in delayed <italic>Fak</italic> deletion, occurring only after <italic>Rorc</italic> expression is initiated, naive CD4 T cells isolated from these mice exhibited impaired Th17 differentiation. This finding suggests that FAK plays a functionally important role, at least, at the later stages of Th17 commitment. Importantly, even after ROR&#x3b3;T expression initiates during the early stages of Th17 differentiation, the subsequent loss of FAK can still hinder the differentiation process. Collectively, these results support the conclusion that FAK is an essential signaling mediator for IL-17A induction and proper Th17 cell differentiation.</p>
<p>STAT3 is critical for the activation and stabilization of ROR&#x3b3;T expression, while NF-&#x3ba;B supports the inflammatory milieu required for Th17 physiology and also aids in the transcription of Th17-related genes (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B76">76</xref>). Both STAT3 and NF-&#x3ba;B are pivotal in the differentiation and function of Th17 cells. In our study, both FAK-deficient cells and FAK inhibitors affected STAT3 and NF-&#x3ba;B activity. Thus, FAK actively stimulates both pathways to enhance Th17 differentiation. FAK expression, however, was not induced by ROR&#x3b3;T. Thus, it is plausible to suggest that ROR&#x3b3;T and FAK are independent regulators of Th17 cell differentiation, although they may interact or crosstalk at the level of STAT3 and NF-&#x3ba;B. In our results, FAK reduced the amount of SOCS3 protein. Additionally, FAK-stimulated NF-&#x3ba;B bound to the <italic>Socs3</italic> promoter, inhibiting the <italic>Socs3</italic> gene expression. Since SOCS3 is a negative regulator of STAT3 (<xref ref-type="bibr" rid="B51">51</xref>), it is plausible to hypothesize that this reduction in SOCS3 leads to increased STAT3 activity, suggesting a possible link between NF-&#x3ba;B and STAT3.</p>
<p>PND1186 (also known as VS 4718 or SR 2156) is a reversible, ATP-competitive FAK inhibitor with an <italic>in vitro</italic> IC<sub>50</sub> of 1.5 nM. Selectivity profiling via Millipore&#x2019;s KinaseProfiler Service revealed that 0.1 &#x3bc;M PND1186 inhibited FAK potently and also showed activity against FLT3, but did not significantly affect c-Src or p130Cas phosphorylation in adherent cells (<xref ref-type="bibr" rid="B58">58</xref>). Importantly, FLT3 is primarily expressed in hematopoietic stem and progenitor cells and is rapidly downregulated upon T-lineage commitment. Mature CD4 T cells, including Th17 cells, do not express detectable levels of FLT3, as supported by publicly available transcriptomic datasets (e.g., ImmGen). Therefore, we believe that off-target inhibition of FLT3 by PND1186 is less likely to contribute to the effects observed in our Th17 differentiation assays.</p>
<p>To summarize, the absence of FAK hinders differentiation of Th17 cells. This study offers crucial insights into the role of FAK during Th17 responses and in immune-related disorders. Targeting FAK as a treatment for Th17-mediated autoimmunity holds promise as a potential clinical approach, and as such, warrants further investigation.</p>
</sec>
<sec id="s4" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="s4_1">
<title>Mice</title>
<p>Female C57BL/6 mice (6&#x2013;8 weeks old) were purchased from Daehan Bio Link. <italic>Fak</italic>
<sup>fl/fl</sup> (<xref ref-type="bibr" rid="B77">77</xref>), and <italic>Rela</italic>
<sup>fl/fl</sup> (<xref ref-type="bibr" rid="B78">78</xref>) mice were purchased from the Jackson Laboratory. All animal experiments were approved by the Sogang University Institutional Animal Care and Use Committee (approval no. IACUCSGU2019_09).</p>
</sec>
<sec id="s4_2">
<title>Culture of CD4 T cells</title>
<p>Na&#xef;ve CD4 T cells were isolated from 6&#x2013;8-week-old female mice using a Mojosort&#x2122; mouse na&#xef;ve CD4 T cell isolation kit (BioLegend). Purified na&#xef;ve CD4 T cells were then activated by plate-bound anti-CD3&#x3f5; (10 &#x3bc;g/ml) and soluble anti-CD28 (5 &#x3bc;g/ml) antibodies. The following antibodies and recombinant cytokines were used to differentiate each cell subset. Th1: mouse recombinant IL-2 (1 ng/ml, eBioscience), mouse recombinant IL-12 p70 (3.5 ng/ml, eBioscience), and anti-mouse IL-4 (5 &#x3bc;g/ml); Th2: mouse recombinant IL-2 (1 ng/ml), mouse recombinant IL-4 (5 ng/ml, R&amp;D systems), and anti-mouse IFN&#x3b3; (5 &#x3bc;g/ml); Th17: mouse recombinant IL-6 (50 ng/ml, R&amp;D systems), human recombinant TGF&#x3b2;1 (1 ng/ml, R&amp;D systems), mouse recombinant TNF&#x3b1; (1 ng/ml, eBioscience), mouse recombinant IL-1&#x3b2; (2 ng/ml, Gibco), anti-mouse IFN&#x3b3; (5 &#x3bc;g/ml), and anti-mouse IL-4 (5 &#x3bc;g/ml); Tregs: mouse recombinant IL-2 (1 ng/ml), human recombinant TGF&#x3b2;1 (5 ng/ml), anti-mouse IFN&#x3b3; (10 &#x3bc;g/ml), and anti-mouse IL-4 (10 &#x3bc;g/ml). For pathogenic Th17 cell differentiation, na&#xef;ve CD4 T cells were cultured with mouse recombinant IL-6 (50 ng/ml), mouse recombinant IL-1&#x3b2; (2 ng/ml), mouse recombinant IL-23 (5 ng/ml, Biolegend), anti-mouse IFN&#x3b3; (5 &#x3bc;g/ml), and anti-mouse IL-4 (5 &#x3bc;g/ml). PND1186, GSK2256098, and GSK805 were purchased from Selleck Chemicals and administered at the indicated dosages. All inhibitors were dissolved in DMSO, which served as the vehicle control in all experiments.</p>
</sec>
<sec id="s4_3">
<title>Flow cytometry</title>
<p>Cells were harvested and restimulated for 4 h with the eBioscience&#x2122; cell stimulation cocktail (eBioscience). The stimulated cells were then fixed and permeabilized (eBioscience) prior to staining in accordance with the manufacturer&#x2019;s instructions. Briefly, cells were stained with PerCP/Cy5.5-conjugated anti-IL-17A (BioLegend) and FITC-conjugated anti-FOXP3 (eBioscience) antibodies. For phospho flow cytometry, cells were stimulated for 3 days with Dynabeads&#x2122; mouse T-activator CD3/CD28 (Thermo Fisher Scientific) and fixed and permeabilized in fixation buffer (BioLegend), followed by staining with FITC-conjugated anti-pSTAT3 (BD Biosciences) and PerCP/eFluor 710-conjugated anti-pSTAT5 (eBioscience) antibodies. Stained cells were analyzed using Accuri C6 Plus flow cytometer (BD Biosciences). Data were analyzed with Flowjo software.</p>
</sec>
<sec id="s4_4">
<title>Retroviral transduction</title>
<p>A total of 1.8 X 10<sup>6</sup> Phoenix Eco cells were transfected with control MIEG3 (WT) or the RV-Cre retroviral plasmid (<xref ref-type="bibr" rid="B36">36</xref>) (a gift from Chen Dong) (2 &#x3bc;g) and the pCL-Eco helper plasmid (1 &#x3bc;g) as previously described (<xref ref-type="bibr" rid="B79">79</xref>). Na&#xef;ve CD4 T cells were activated with plate-bound anti-CD3 and soluble anti-CD28 for 20&#x2013;24 h. The T cell culture medium was replaced with virus-containing medium (i.e. supernatants from Phoenix Eco cells) supplemented with polybrene (4 &#x3bc;g/ml, Sigma Aldrich) and the culture plates were spun down (1600 x g, 90 min, RT) to facilitate infection. The cells were cultured under appropriate polarizing conditions for 3 days. GFP+ cells were sorted using FACSAria III (BD Bioscience) or FACSAria Fusion (BD Bioscience) and further analyzed.</p>
</sec>
<sec id="s4_5">
<title>Fak knockdown assay</title>
<p>Fak-shRNA plasmids were cloned into an MSCV-LMP empty vector (GE Healthcare) in accordance with the manufacturer&#x2019;s instructions. The following 97-mer nucleotides were used as templates: shRNA #1: 5&#x2019;-TGCTGTTGACAGTGAGCGATGTCTTCAAATGATTGTGTAATAGTGAAGCCACAGATGTATTACACAATCATTTGAAGACACTGCCTACTGCCTCGGA-3&#x2019;; shRNA #2: 5&#x2019;-TGCTGTTGACAGTGAGCGACTACTTGATGTTATTGATCAATAGTGAAGCCACAGATGTATTGATCAATAACATCAAGTAGGTGCCTACTGCCTCGGA-3&#x2019;; and shRNA #3: 5&#x2019;-TGCTGTTGACAGTGAGCGCACTCAAACAGTGAAGACAAAGTAGTGAAGCCACAGATGTACTTTGTCTTCACTGTTTGAGTATGCCTACTGCCTCGGA-3&#x2019;. Each shRNA was transduced into CD4 T cells using the retroviral transduction method as described above.</p>
</sec>
<sec id="s4_6">
<title>Preparation of cell lysates and western blot analysis</title>
<p>Cells were harvested, washed with ice-cold PBS, and lysed at 4&#xb0;C for 15 min with RIPA buffer (Sigma Aldrich) containing protease inhibitor (GenDEPOT). To prepare cytosolic and nucleic extracts, cells were harvested, washed, and lysed at 4&#xb0;C for 10 min with hypotonic buffer containing protease inhibitor. After spinning down the cell suspension, the supernatants were collected for use as cytosolic extracts. The remaining pellets were suspended with RIPA buffer and incubated at 4&#xb0;C for 15 min. These were used as nucleic extracts. Each extract was mixed with a 5X loading buffer (Thermo Fisher Scientific) and boiled for 5 min. Western blot analysis was performed as described (<xref ref-type="bibr" rid="B80">80</xref>). The following antibodies were used: anti-FAK, anti-p65, anti-I&#x3ba;B, anti-pI&#x3ba;B, anti-STAT3, anti-pSTAT3, anti-STAT5, anti-pSTAT5 (all from Cell Signaling Technology), anti-&#x3b2;-Actin (Santa Cruz Biotechnology), anti-SOCS3 (Santa Cruz Biotechnology), and anti-LaminB (Abcam).</p>
</sec>
<sec id="s4_7">
<title>Total RNA isolation and RT-qPCR</title>
<p>Cells were harvested, homogenized in TRI reagent (Molecular Research Center), and total RNA was isolated according to the manufacturer&#x2019;s instructions. Reverse transcription was performed using TOPscript RT (Enzynomics), and RT-qPCR was performed using TOPreal&#x2122; qPCR 2X PreMIX (Enzynomics) for SYBR Green, a TaqMan probe, and a LightCycler 96 (Roche). The primer sequences are listed in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S1</bold>
</xref>.</p>
</sec>
<sec id="s4_8">
<title>Chromatin immunoprecipitation assay</title>
<p>Cells (3.0 &#xd7; 10<sup>6</sup>) were harvested, fixed with 1% formaldehyde solution for 10 min at room temperature, and then subjected to a ChIP assay using the Magna ChIP&#x2122; A/G chromatin immunoprecipitation kit (Merck Millipore) according to the manufacturer&#x2019;s instructions. Cell extracts were immunoprecipitated with either an anti-RelA or normal rabbit IgG (Cell Signaling Technology) antibodies. RT-qPCR was performed using eluted DNA. The primer sequences are listed in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Table S2</bold>
</xref>.</p>
</sec>
<sec id="s4_9">
<title>Dual luciferase assay</title>
<p>The EL4 cells were transfected by electroporation with a pGL3-<italic>Il17a</italic> promoter vector, a pRL <italic>Renilla</italic> luciferase reporter vector, and either control or <italic>Fak</italic> siRNA (Santa Cruz Biotechnology). After transfection, the cells were incubated for 20 h in complete medium. On the following day, cells were stimulated for 4 h with PMA (50 ng/ml) and ionomycin (1 &#x3bc;M). Luciferase activity was measured using a dual-luciferase reporter assay system (Promega). Relative luciferase activity was calculated by dividing the activity of <italic>Firefly</italic> luciferase by that of <italic>Renilla</italic> luciferase.</p>
</sec>
<sec id="s4_10">
<title>Induction and analysis of EAE</title>
<p>On Day 0, EAE was induced in female C57BL/6 mice (8&#x2013;10 weeks old) using an EAE induction kit (Hooke Laboratories). For treatment with PND1186, mice were injected intraperitoneally with inhibitor or vehicle solution (50 mg/kg/day) starting from Day 3. Mice were monitored daily to measure the clinical score, which was assessed as follows: 0: no symptoms; 1: limp tail; 2: weakness of hind legs; 3: complete paralysis of hind legs; 4: complete hind leg and partial front leg paralysis; 5: moribund state. CNS-infiltrating cells were isolated as described previously (<xref ref-type="bibr" rid="B81">81</xref>). Isolated mononuclear cells were stimulated for 4 h with eBioscience&#x2122; cell stimulation cocktail, and then stained with the following antibodies: FITC-conjugated anti-FOXP3 (eBioscience), FITC-conjugated anti-GM-CSF, PE-conjugated anti-IFN&#x3b3;, PerCP/Cy5.5-conjugated anti-IL-17A, APC-conjugated anti-CD4, FITC-conjugated anti-CD8&#x3b1;, PE-conjugated anti-CD11b, and PerCP/Cy5.5-conjugated anti-GR-1 (all from BioLegend), and APC-conjugated anti-CD45 antibody. Additionally, some of the isolated spinal cords were subjected to H&amp;E and luxol fast blue staining.</p>
</sec>
<sec id="s4_11">
<title>Statistical analysis</title>
<p>Data are presented as the mean &#xb1; standard deviation. Statistical differences between the groups were analyzed using the Student <italic>t</italic> test. P values &lt; 0.05 were considered statistically significant (*P &lt; 0.05; **P &lt; 0.01; ***P &lt; 0.001; ****P&lt;0.0001).</p>
</sec>
</sec>
</body>
<back>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The data presented in the study are deposited in the NCBI GEO repository (accession number GSE298541).</p>
</sec>
<sec id="s6" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The animal study was approved by Sogang University Institutional Animal Care and Use Committee (approval no. IACUCSGU2019_09). The study was conducted in accordance with the local legislation and institutional requirements.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>HK: Conceptualization, Formal Analysis, Investigation, Writing &#x2013; original draft. JL: Investigation, Writing &#x2013; original draft. HS: Investigation, Writing &#x2013; original draft. WHL: Investigation, Writing &#x2013; original draft. GK: Investigation, Writing &#x2013; original draft. WYL: Investigation, Writing &#x2013; review &amp; editing. H-RK: Methodology, Resources, Writing &#x2013; review &amp; editing. GL: Conceptualization, Funding acquisition, Supervision, Writing &#x2013; review &amp; editing.</p>
</sec>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research and/or publication of this article. This work was supported by a National Research Foundation of Korea (NRF) grant funded by Korean government (RS-2022-NR068982 for GRL).</p>
</sec>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="ai-statement">
<title>Generative AI statement</title>
<p>The author(s) declare that no Generative AI was used in the creation of this manuscript.</p>
<p>Any alternative text (alt text) provided alongside figures in this article has been generated by Frontiers with the support of artificial intelligence and reasonable efforts have been made to ensure accuracy, including review by the authors wherever possible. If you identify any issues, please contact us.</p>
</sec>
<sec id="s11" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s12" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fimmu.2025.1596802/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fimmu.2025.1596802/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
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