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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2024.1368465</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Mini Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Microglial- neuronal crosstalk in chronic viral infection through mTOR, SPP1/OPN and inflammasome pathway signaling</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Argandona Lopez</surname>
<given-names>Catalina</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2626900"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Brown</surname>
<given-names>Amanda M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/665325"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/funding-acquisition/"/>
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</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Division of Neuroimmunology, Department of Neurology, Johns Hopkins University School of Medicine</institution>, <addr-line>Baltimore, MD</addr-line>, <country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Division of Neuroimmunology, Department of Neurology and Neuroscience, Johns Hopkins University School of Medicine</institution>, <addr-line>Baltimore, MD</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Wassim Elyaman, Columbia University, United States</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Kristen E. Funk, University of North Carolina at Charlotte, United States</p>
<p>Marta Olah, Columbia University, United States</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Amanda M. Brown, <email xlink:href="mailto:abrown76@jhmi.edu">abrown76@jhmi.edu</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>05</day>
<month>04</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>15</volume>
<elocation-id>1368465</elocation-id>
<history>
<date date-type="received">
<day>10</day>
<month>01</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>25</day>
<month>03</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 Argandona Lopez and Brown</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Argandona Lopez and Brown</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>HIV-infection of microglia and macrophages (MMs) induces neuronal injury and chronic release of inflammatory stimuli through direct and indirect molecular pathways. A large percentage of people with HIV-associated neurologic and psychiatric co-morbidities have high levels of circulating inflammatory molecules. Microglia, given their susceptibility to HIV infection and long-lived nature, are reservoirs for persistent infection. MMs and neurons possess the molecular machinery to detect pathogen nucleic acids and proteins to activate innate immune signals. Full activation of inflammasome assembly and expression of IL-1&#x3b2; requires a priming event and a second signal. Many studies have demonstrated that HIV infection alone can activate inflammasome activity. Interestingly, secreted phosphoprotein-1 (<italic>SPP1</italic>/OPN) expression is highly upregulated in the CNS of people infected with HIV and neurologic dysfunction. Interestingly, all evidence thus far suggests a protective function of <italic>SPP1</italic> signaling through mammalian target of rapamycin (mTORC1/2) pathway function to counter HIV-neuronal injury. Moreover, HIV-infected mice knocked down for <italic>SPP1</italic> show by neuroimaging, increased neuroinflammation compared to controls. This suggests that <italic>SPP1</italic> uses unique regulatory mechanisms to control the level of inflammatory signaling. In this mini review, we discuss the known and yet-to-be discovered biological links between <italic>SPP1</italic>-mediated stimulation of mTOR and inflammasome activity. Additional new mechanistic insights from studies in relevant experimental models will provide a greater understanding of crosstalk between microglia and neurons in the regulation of CNS homeostasis.</p>
</abstract>
<kwd-group>
<kwd>neuroimmunology</kwd>
<kwd>neuroinflammation</kwd>
<kwd>microglia</kwd>
<kwd>latency</kwd>
<kwd>human immunodeficiency virus</kwd>
<kwd>neurodegeneration</kwd>
<kwd>neurological disorders</kwd>
<kwd>integrins</kwd>
</kwd-group>
<counts>
<fig-count count="2"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="136"/>
<page-count count="9"/>
<word-count count="3724"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Multiple Sclerosis and Neuroimmunology</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Neurologic and gait disturbances were hallmark features of HIV-1 disease in the 1980s demonstrating the profound negative impact of the virus on central nervous system (CNS) functioning (<xref ref-type="bibr" rid="B1">1</xref>). The clinical manifestations of NeuroHIV can include cognitive impairment, depression, anxiety, and deficits in fine motor movements (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B3">3</xref>). Comprehensive neuropsychological testing is used to identify people with HIV-associated neurocognitive disorder, now more generally known as NeuroHIV, to reflect the changing clinical spectrum of neurologic and psychiatric co-morbidities (<xref ref-type="bibr" rid="B4">4</xref>&#x2013;<xref ref-type="bibr" rid="B6">6</xref>). Seminal neuropathology studies on HIV-infected post-mortem human brain tissue identified brain microglia and macrophages (MMs) as the predominant cellular targets of the virus (<xref ref-type="bibr" rid="B7">7</xref>&#x2013;<xref ref-type="bibr" rid="B10">10</xref>). Through different mechanisms, HIV-infected monocytes, T-cells, and viral particles cross the blood-brain-barrier, which itself becomes impaired (<xref ref-type="bibr" rid="B11">11</xref>&#x2013;<xref ref-type="bibr" rid="B14">14</xref>). Targeted antiretroviral therapies (ART), first introduced in 1996, were highly effective at blocking virus replication and sparing CD4+ T-cell death and immune system dysfunction (<xref ref-type="bibr" rid="B15">15</xref>). Many ART regimens reach pharmacological levels in the CSF; however, whether inhibitory concentrations reach regions in the brain parenchyma, where HIV-infected MMs reside, remains unclear (<xref ref-type="bibr" rid="B16">16</xref>&#x2013;<xref ref-type="bibr" rid="B18">18</xref>). Additionally, yolk sac-derived microglia are relatively long-lived cells with a turnover of many months, and their capacity for self-renewal provides a sanctuary for HIV in brain tissue (<xref ref-type="bibr" rid="B19">19</xref>&#x2013;<xref ref-type="bibr" rid="B21">21</xref>). Even under conditions of low-level HIV gene expression, immune activation in the form of increased circulating pro-inflammatory cytokines and immune markers are present in people with HIV on ART (<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B23">23</xref>).</p>
<p>HIV encodes nine genes that co-opt intrinsic immune cell pathways normally used for growth, metabolism and homeostasis (<xref ref-type="bibr" rid="B24">24</xref>, <xref ref-type="bibr" rid="B25">25</xref>). Innate immune signaling is an early detection system meant to thwart pathogen replication by activating the release of inflammatory molecules that, in turn, prime adaptive immunity (<xref ref-type="bibr" rid="B26">26</xref>&#x2013;<xref ref-type="bibr" rid="B28">28</xref>). HIV-1 binds to CD4 and chemokine receptors, in a process that initiates fusion of the viral and plasma membranes (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). Neurons express chemokine receptors that support neuronal development and maturation, but not CD4, and therefore, do not allow HIV entry (<xref ref-type="bibr" rid="B33">33</xref>). Viral fusion is followed by the release and trafficking of the preintegration complex (PIC) to the nucleus (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). The PIC uncoating process within the nucleus was first shown for primary human macrophages years ago (<xref ref-type="bibr" rid="B29">29</xref>, <xref ref-type="bibr" rid="B31">31</xref>), but only recently confirmed for T-cells (<xref ref-type="bibr" rid="B34">34</xref>). This mechanistic detail has important implications for understanding whether HIV can delay detection by nucleic acid sensors that activate Toll-like receptor (TLR) signaling (<xref ref-type="bibr" rid="B24">24</xref>, <xref ref-type="bibr" rid="B30">30</xref>). Importantly, in MMs, virus is packaged in vesicular bodies and buds from the plasma membrane in contrast to the cytopathic release of viral particles from T-cells (<xref ref-type="bibr" rid="B35">35</xref>, <xref ref-type="bibr" rid="B36">36</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>HIV lifecycle and relevance to inflammasome activation. (1) At target cell plasma membrane domains, HIV envelope protein gp120 trimer (red) binds to the CD4 receptor (yellow). Conformational alterations expose binding surfaces for coreceptor CCR5 on the Env trimer (green). (2) Fusion of Env with the cell plasma membrane is followed by uncoating and release of the preintegration complex (PIC) which contains a few molecules of reverse transcriptase, integrase and two copies of HIV RNA (vRNA) (<xref ref-type="bibr" rid="B29">29</xref>&#x2013;<xref ref-type="bibr" rid="B31">31</xref>). Should the integrity of the PIC be compromised, viral RNA and proteins could be detected by innate immune sensors and thus initiate an inflammasome priming. (3) The actin cytoskeleton and specific microtubule motors transport the PIC to the nucleus (<xref ref-type="bibr" rid="B32">32</xref>). (4) The PIC can enter the nucleus in several ways including direct nuclear import and induced invaginations (<xref ref-type="bibr" rid="B24">24</xref>, <xref ref-type="bibr" rid="B30">30</xref>). Degradation of the nucleoprotein coat would expose vRNA outside the nucleus, and provide another opportunity to activate innate antiviral responses. After reverse transcription (5), integration (6), transcription (7), and translation (8), viral proteins, vRNA, and (9) certain host proteins assembled at the inner plasma membrane surface. This mobilizes cytoskeletal proteins and molecular forces that facilitate budding (10), (11) release and maturation of new viral particles (<xref ref-type="bibr" rid="B32">32</xref>). Macrophages and microglia unlike T-cells are much more resistant to the cytopathic effects of HIV replication and therefore undergo innate immune activation in a sustained fashion. The figure was created with <uri xlink:href="https://BioRender.com">BioRender</uri>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-15-1368465-g001.tif"/>
</fig>
<p>Microglia not only protect the brain from pathogens and injury, but also serve critical roles in maintaining neuronal viability, proper synaptodendritic function and integrity in development and over the lifespan (<xref ref-type="bibr" rid="B20">20</xref>, <xref ref-type="bibr" rid="B21">21</xref>, <xref ref-type="bibr" rid="B37">37</xref>&#x2013;<xref ref-type="bibr" rid="B39">39</xref>). Understanding the mechanisms by which HIV-1 affects microglial innate immune function is key to addressing the brain as a source of pathologic neuroinflammation correlated with neurological and psychiatric comorbidities (<xref ref-type="bibr" rid="B18">18</xref>, <xref ref-type="bibr" rid="B23">23</xref>, <xref ref-type="bibr" rid="B40">40</xref>, <xref ref-type="bibr" rid="B41">41</xref>). Below, we discuss what is known about HIV activation of the inflammasome, particularly as it relates to microglia and neurons and the expression of specific pro-inflammatory cytokines that remain elevated in people with NeuroHIV. We then discuss another innate sensor, secreted phosphoprotein-1 (or osteopontin, <italic>SPP1</italic>/OPN), and its intersection with the mammalian target of rapamycin pathway (mTOR) and potentially the inflammasome to provide a unifying view of putative mechanistic connections and cell-type dependent crosstalk between the pathways.</p>
</sec>
<sec id="s2">
<title>HIV activation of inflammasome signaling in the CNS</title>
<p>As the exploration of inflammasome function has progressed, NLRP3 is implicated in a variety of neurodegenerative diseases, including NeuroHIV (<xref ref-type="bibr" rid="B42">42</xref>&#x2013;<xref ref-type="bibr" rid="B48">48</xref>). The inflammasome is a multiprotein complex involved in the immune and inflammatory response. Different inflammasomes types exist in the nucleotide-binding oligomerization domain, Leucine-rich-containing proteins (NLR) family (<xref ref-type="bibr" rid="B49">49</xref>). However, all inflammasomes contain key components including: NALP/NLR protein, PYCARD/ASC (Apoptosis-associated speck-like protein containing a CARD), and an enzyme responsible for pro-inflammatory cytokine activation (<xref ref-type="bibr" rid="B50">50</xref>&#x2013;<xref ref-type="bibr" rid="B52">52</xref>). The NLRP3 inflammasome complex interacts with caspase-1 to activate IL-1&#x3b2; and IL-18 (<xref ref-type="bibr" rid="B53">53</xref>, <xref ref-type="bibr" rid="B54">54</xref>). Both are pro-inflammatory cytokines that play various roles throughout the&#xa0;body. In microbial infections, the increase in IL-1&#x3b2; secretion&#xa0;is&#xa0;responsible for recruiting innate immune cells. In neurodegenerative diseases, IL-1&#x3b2; levels increase in response to microglial activation and neuronal injury (<xref ref-type="bibr" rid="B55">55</xref>, <xref ref-type="bibr" rid="B56">56</xref>). IL-18 induces IFN production in T-cells and natural killer cells, promotes the production of other cytokines, and is suggested to exacerbate demyelination and cellular infiltration (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B57">57</xref>).</p>
<p>NLRP3 inflammasome assembly needs two signals: a priming and an activating signal (<xref ref-type="bibr" rid="B58">58</xref>&#x2013;<xref ref-type="bibr" rid="B60">60</xref>). Of the many ways to prime the inflammasome, the most studied route is through NFkappaB-dependent signals (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Many ligands can prime the NLRP3 inflammasome, including lipopolysaccharide (LPS) and TLR inducers like dsRNA (<xref ref-type="bibr" rid="B59">59</xref>&#x2013;<xref ref-type="bibr" rid="B61">61</xref>). During reverse transcription, dsRNA can be detected by intracellular, endosome-bound TLR3 (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) (<xref ref-type="bibr" rid="B32">32</xref>, <xref ref-type="bibr" rid="B65">65</xref>). TLR3 ligand binding activates ERK 1/2, MAPK, and NFkappaB-pathways, promoting gene transcription (<xref ref-type="bibr" rid="B62">62</xref>). Interestingly, the HIV transactivator of transcription (Tat) protein alone can prime and activate the inflammasome complex (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) (<xref ref-type="bibr" rid="B66">66</xref>). Various ligands such as, ATP, nigericin, aggregated proteins, reactive oxygen species (ROS), and HIV viral proteins activate the NLRP3 inflammasome (<xref ref-type="bibr" rid="B46">46</xref>, <xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B58">58</xref>, <xref ref-type="bibr" rid="B61">61</xref>, <xref ref-type="bibr" rid="B66">66</xref>&#x2013;<xref ref-type="bibr" rid="B69">69</xref>). These signals allow for the recruitment of additional proteins like NLRP3, ASC, and caspase-1 that are necessary for oligomerization and subsequent cleavage and maturation of cytokines (<xref ref-type="bibr" rid="B62">62</xref>). Caspase-1 also cleaves gasdermin D, leading to cell membrane pore formation, and a type of pro-inflammatory cell death known as pyroptosis (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) (<xref ref-type="bibr" rid="B62">62</xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Schematic of the effects of HIV infection on microglia and neurons. The NLRP3 inflammasome is a multi-protein complex implicated in many neurodegenerative diseases including HAND. After HIV crosses the blood-brain barrier, it can bind to CD4+ cells, such as microglia, initiating the fusion of the virus to the plasma membrane, ultimately allowing HIV to enter the cell. After infiltrating the cell, many different aspects can affect the transcriptional activity of microglia via the NF-<italic>&#x3ba;&#x3b2;</italic> pathway. Microglia. Step 1 indicates the first step required for inflammasome assembly: the priming step. Many stimuli can prime the NLRP3 inflammasome, including dsRNA for endosome-bound TLR3 (<xref ref-type="bibr" rid="B58">58</xref>, <xref ref-type="bibr" rid="B59">59</xref>, <xref ref-type="bibr" rid="B61">61</xref>, <xref ref-type="bibr" rid="B62">62</xref>). Priming of the inflammasome leads to the localization of NF-<italic>&#x3ba;&#x3b2;</italic> into the nucleus, indicated by Step 2. Along with host gene transcription, proteins like HIV TAT can be transcribed, which can act to prime/activate the inflammasome. Step 3 indicates the availability of the NLRP3 subunits necessary for the inflammasome to be oligomerized such as the NLRP3 protein, apoptosis-associated speck-like protein (ASC), and pro-caspase-1 (<xref ref-type="bibr" rid="B62">62</xref>). Step 4 indicates the activating step in NLRP3 inflammasome activation. Various stimuli, such as extracellular TAT protein, can trigger the activating signal. After receiving an activating signal, the NLRP3 inflammasome can begin its oligomerization and become functional. Pro-interleukin enzymes are recruited to be cleaved into their mature forms. For the NLRP3 inflammasome, IL-1B and IL-18 are cleaved by Caspase-1 and released, as shown by Steps 5, 6. The release of NLRP3-associated pro-inflammatory cytokines occurs via pores formed in the cell membrane. Caspase-1 will also cleave gasdermin D, leading to pyroptosis (<xref ref-type="bibr" rid="B62">62</xref>). The release of cytokines and viral proteins can then exacerbate local inflammation, leading to the recruitment of more immune cells and can affect other cell types, such as neurons. Neurons. Considering that HIV is unable to infect neurons directly, there are many examples of HIV-induced neuronal damage. One major contributor is the HIV-1 gp120 (Env). This protein can bind to CXCR4 and CCR5 receptors, expressed on neurons. HIV-1 Env has been shown to damage synaptic connections in cortical neurons when bound to CXCR4 via mTORC2 (<xref ref-type="bibr" rid="B63">63</xref>). When neurons were co-treated with HIV-1 Env and OPN/SPP1. Neurons showed signs of activated mTORC1/mTORC2 pathways, suggesting a regulatory feedback loop. Along with the required &#x3b2;1 and &#x3b2;3 integrin receptors, which OPN/SPP1 binds to, OPN/SPP1 acts as a neuroprotective modulator that promotes neurite growth in cortical neurons (&#x3b2;1 integrin) and regulates post-synaptic dendritic spine density in hippocampal neurons (&#x3b2;3 integrin) through mTORC1 (<xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B64">64</xref>). Despite the protective effects of OPN/SPP1, over time, HIV-infected individuals present with neuronal degradation. Crosstalk. HIV-infected microglia have increased levels of NLRP3 activity, leading to pyroptosis and the release of highly pro-inflammatory cytokines. Given the role of IL-1&#x3b2; in inflammation, it is important to consider the various impacts it can have on the local microenvironment. Surrounding cells will respond to the inflammatory signal, such as upregulating SPP1/OPN. Regardless of the intent to reduce neuroinflammation, we see that HIV-infected individuals continue having low levels of chronic inflammation while on antiretroviral treatment. When looking at the acute effects, there is an increase in microglial phagocytosis, pyroptosis, pro-inflammatory cytokines, and OPN/SPP1 secretion. Chronically, we begin to see prolonged neuroinflammatory signaling, neurodegeneration, neuronal cell death, neuronal impairment, and functional disability, indicating the urgency to understand better the mechanisms of disease progression, cellular interactions, and regulation of neuroinflammatory pathways in HIV infection.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-15-1368465-g002.tif"/>
</fig>
<p>The NLRP3 inflammasome is robustly expressed in microglia (<xref ref-type="bibr" rid="B42">42</xref>, <xref ref-type="bibr" rid="B59">59</xref>). However, whether the same is true for neurons is less well known. Interestingly, neurons undergoing pyroptosis have been documented (<xref ref-type="bibr" rid="B70">70</xref>&#x2013;<xref ref-type="bibr" rid="B72">72</xref>). This is important since pyroptosis is strongly associated with NLRP3 inflammasome activation (<xref ref-type="bibr" rid="B73">73</xref>&#x2013;<xref ref-type="bibr" rid="B77">77</xref>). The NLRP1 and AIM2 inflammasome complexes of cortical neurons have been the most investigated (<xref ref-type="bibr" rid="B70">70</xref>&#x2013;<xref ref-type="bibr" rid="B72">72</xref>). Recently, studies reported that dopaminergic neurons express NLRP3 throughout the progression of Parkinson&#x2019;s disease (<xref ref-type="bibr" rid="B45">45</xref>, <xref ref-type="bibr" rid="B47">47</xref>). However, activation of NLRP3 in microglia contributes to demyelination through IL-1&#x3b2; and IL-18 secretion (<xref ref-type="bibr" rid="B44">44</xref>). HIV-positive individuals have increased caspase-1, IL-1&#x3b2;, and IL-18 levels, suggesting NLRP3 inflammasome activation systemically and in the CNS (<xref ref-type="bibr" rid="B78">78</xref>&#x2013;<xref ref-type="bibr" rid="B80">80</xref>). Given the association between neurologic disorders, neuroinflammation, and the activation of the NLRP3 inflammasome in microglia and neurons, the potential for crosstalk between these cells is expected.</p>
</sec>
<sec id="s3">
<title>HIV induced inflammasome activation and mTOR signaling in NeuroHIV</title>
<p>There is renewed interest in mTOR signaling in HIV infection as new roles for this pathway have emerged. Early studies implicated a role for mTORC signaling in promoting virus replication (<xref ref-type="bibr" rid="B81">81</xref>&#x2013;<xref ref-type="bibr" rid="B83">83</xref>). Most recently, mTORC-regulated mechanisms in HIV escape from latency in T-cells (<xref ref-type="bibr" rid="B84">84</xref>), autophagy (<xref ref-type="bibr" rid="B85">85</xref>), apoptosis (<xref ref-type="bibr" rid="B86">86</xref>), and the homing of intestinal CCR6+CD4+ T-cells (<xref ref-type="bibr" rid="B87">87</xref>) have been reported. Interestingly, in efforts to identify new candidate genes involved in latent HIV infection, a role for pro-inflammatory cytokines and signaling pathways regulated by secreted phosphoprotein-1/osteopontin (<italic>SPP1/</italic>OPN) were discovered (<xref ref-type="bibr" rid="B88">88</xref>). The mTOR pathway is composed of two structurally distinct, multi-subunit protein complexes, mTORC1 and mTORC2 that receive signals about a cell&#x2019;s metabolic status to fine tune growth and repair processes through activation of relevant transcriptional programs (<xref ref-type="bibr" rid="B89">89</xref>, <xref ref-type="bibr" rid="B90">90</xref>). HIV-positive individuals have dysregulated autophagy, indicating upregulated levels of mTOR activity (<xref ref-type="bibr" rid="B91">91</xref>). Increases in mTOR activity are associated with reactive microglia, neuronal damage, neurodegeneration, and memory deficits, all characteristics of NeuroHIV (<xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B92">92</xref>). Although scarcely investigated, evidence of a regulatory relationships between mTOR and NLRP3 in immune cells and neurons have been reported. Studies have shown that downregulating mTOR activity reduces NLRP3 activation (<xref ref-type="bibr" rid="B93">93</xref>&#x2013;<xref ref-type="bibr" rid="B96">96</xref>). With reduced mTOR activity, autophagy removes detrimental pro-inflammatory stimuli, including ROS. Indeed, ROS activates the NLRP3 inflammasome and has been associated with NeuroHIV (<xref ref-type="bibr" rid="B97">97</xref>, <xref ref-type="bibr" rid="B98">98</xref>). Another study found that inhibition of mTORC1 leads to decreased secreted IL-1&#x3b2;, indicating post-transcriptional effects on NLRP3 activation (<xref ref-type="bibr" rid="B94">94</xref>). A similar regulatory relationship was observed with <italic>in vitro</italic> and <italic>in vivo</italic> NLRP3 knock-out studies in which mTOR activity decreased (<xref ref-type="bibr" rid="B93">93</xref>, <xref ref-type="bibr" rid="B99">99</xref>). In macrophages an interaction between NLRP3 and mTOR was found, indicating a direct protein-protein interaction and communication between both pathways (<xref ref-type="bibr" rid="B93">93</xref>). Lastly, IL-1&#x3b2; can activate mTOR in T-cells and in hippocampal neurons further illustrating NLRP3 cell-specific- and cell-to-cell communication pathways and functional outcomes like neuroinflammation (<xref ref-type="bibr" rid="B100">100</xref>&#x2013;<xref ref-type="bibr" rid="B102">102</xref>). The emerging relationships between NLRP3, mTOR, and HIV infection becomes more interesting when considering the function of additional innate immune sensors like <italic>SPP1/</italic>OPN.</p>
</sec>
<sec id="s4">
<title>Innate signaling pathways collide: SPP1/OPN and mTOR activation in NeuroHIV</title>
<p>The term neuroinflammation, as it is currently understood, broadly signifies a mix of innate and adaptive responses of resident brain- and circulating immune cells that, if left unregulated, can have damaging short- and long-term consequences (<xref ref-type="bibr" rid="B103">103</xref>). In this regard, chronic expression of proinflammatory molecules leads to over activation of the immune system and accumulation of damage and disability with time. Secreted phosphoprotein-1 (<italic>SPP1/</italic>OPN), by virtue of its modular domain structure, is a multifunctional phosphoprotein implicated in several neurodegenerative diseases (<xref ref-type="bibr" rid="B104">104</xref>&#x2013;<xref ref-type="bibr" rid="B110">110</xref>). The expression of <italic>SPP1/</italic>OPN is markedly elevated in the CNS of humans and non-human primate models of HIV infection (<xref ref-type="bibr" rid="B109">109</xref>, <xref ref-type="bibr" rid="B110">110</xref>). However, more recent findings with humanized mice and positron emission tomography neuroimaging demonstrate that <italic>SPP1</italic>/OPN expression is required to downregulate the microglial inflammatory response (<xref ref-type="bibr" rid="B111">111</xref>). How exactly <italic>SPP1</italic>/OPN modulates the HIV-induced inflammatory response in the brain is not yet understood. However, in cultured primary human macrophages, HIV replication and NF-<italic>&#x3ba;&#x3b2;</italic> activity is increased in the presence of <italic>SPP1/</italic>OPN (<xref ref-type="bibr" rid="B110">110</xref>). The degree of neuroinflammation correlated with the extent of HIV replication only in humanized mice expressing <italic>SPP1/</italic>OPN (<xref ref-type="bibr" rid="B111">111</xref>). Neurons cannot be infected with HIV due to their lack of the CD4 receptor, however the presence of certain chemokine coreceptors like CCR5 or CXCR4 makes them vulnerable to excitotoxicity, degeneration and death after binding interactions with HIV Gp120 (<xref ref-type="bibr" rid="B33">33</xref>, <xref ref-type="bibr" rid="B112">112</xref>). However, treatment of neurons with recombinant OPN protects hippocampal post-synapses from synaptodendritic injury, and the structural integrity of cortical axons and dendrites via mTORC1/mTORC2 activation (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>) (<xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B64">64</xref>). Therefore, in NeuroHIV, increased expression of <italic>SPP1</italic>/OPN is largely neuroprotective.</p>
</sec>
<sec id="s5">
<title>The intersection of SPP1/OPN, mTOR and inflammasome signaling in neurodegenerative disorders</title>
<p>We first hypothesized that the overexpression of <italic>SPP1/</italic>OPN in individuals with NeuroHIV was harmful, but as discussed above the findings thus far point to a neuroprotective function. While there is increasing evidence of linkages between neurodegeneration and cellular repair processes involved in resolving neuronal injury and neuroinflammation, significant gaps in our understanding of the molecular mechanisms remain. <italic>SPP1/</italic>OPN was identified as a highly-expressed transcript that clustered with a collection of genes termed &#x201c;disease-associated microglia (DAM) (<xref ref-type="bibr" rid="B113">113</xref>&#x2013;<xref ref-type="bibr" rid="B115">115</xref>). Recent studies by Rentsendorj et&#xa0;al., and Qiu et&#xa0;al., beautifully demonstrate using the ADtg and 5XFAD mouse models for AD, respectively roles for specific populations of <italic>SPP1+/-</italic> expressing monocytes, resident microglia and/or macrophages in the phagocytosis of amyloid and speculate about a role for inflammasome signaling (<xref ref-type="bibr" rid="B116">116</xref>, <xref ref-type="bibr" rid="B117">117</xref>). In contrast, in a slow-progressing model of AD (App<sup>NL-F</sup> knock-in reporter mice), <italic>SPP1</italic>+ macrophages and microglia associated with brain blood vessels and those located in the hippocampus were responsible for pathologic microglia-synapse destruction (<xref ref-type="bibr" rid="B118">118</xref>, <xref ref-type="bibr" rid="B119">119</xref>). In another example of neuroprotection, regulatory T-cells localized in the brain several weeks after stroke express <italic>SPP1/</italic>OPN and, through a microglial-&#x3b2;1-integrin-dependent manner, foster repair of white matter axonal damage (<xref ref-type="bibr" rid="B120">120</xref>). In a model of glaucoma, a protective role for SPP1/OPN was found (<xref ref-type="bibr" rid="B117">117</xref>). Interestingly, in an ischemia model, intranasal delivery of a <italic>SPP1/</italic>OPN peptide suppressed microglial activation and the release of pro-inflammatory cytokines IL-1&#x3b2; and IL-6, an indication of reduced NLRP3 activity (<xref ref-type="bibr" rid="B121">121</xref>). To further support this idea, Zhang et&#xa0;al. demonstrated that <italic>SPP1/</italic>OPN negatively regulates the NLRP3 inflammasome in ischemic infarction (<xref ref-type="bibr" rid="B122">122</xref>). Lastly, in a MS model, NLRP3 knockout, as well as one of its components ASC, reduced mRNA SPP1/OPN expression in splenic CD4+ T cells (<xref ref-type="bibr" rid="B123">123</xref>). Whether this same relationship exists in the CNS is unknown, though it is possible that NLRP3 priming lead to NF-kappaB transcription of <italic>SPP1/OPN</italic>. Given its neuroprotective function, a negative feedback loop may be in place to prevent chronic inflammation via continuous NLRP3 activation. Importantly, as more details on the molecular mechanisms of <italic>SPP1/</italic>OPN function continue to emerge, the information will help provide a more complete understanding of the correlative findings of clinical studies (<xref ref-type="bibr" rid="B124">124</xref>) and toward the design of possible efficacious therapeutic interventions.</p>
<p>Over the last several years, understanding of the direct role of glycolytic metabolism on effector immune cell functions has greatly increased (<xref ref-type="bibr" rid="B125">125</xref>&#x2013;<xref ref-type="bibr" rid="B128">128</xref>). As such, there are opportunities for pathogens to alter and/or harness signaling dynamics that feed directly into the mTOR pathway (<xref ref-type="bibr" rid="B129">129</xref>&#x2013;<xref ref-type="bibr" rid="B132">132</xref>). Tissue macrophages and microglia assume a variety of activation states in response to local cues, and downstream stimulation of mTOR signaling is implicated in their M2- (anti-inflammatory) or M1-polarization (proinflammatory), respectively (<xref ref-type="bibr" rid="B133">133</xref>). Interestingly, inhibition of inflammasome activation is protective against disease progression in a mouse model of multiple sclerosis. In this regard, rapamycin, an immunosuppressive agent, was shown to block antigen presentation by dendritic cells and inflammatory signaling by microglia (<xref ref-type="bibr" rid="B133">133</xref>, <xref ref-type="bibr" rid="B134">134</xref>).</p>
<p>The homeostatic balance of the immune system is maintained through direct and indirect interactions and with soluble factors acting locally and over long distances (refs). HIV infection disrupts and hijacks the important cell-to-cell communication network. The virus infects T-cells and MMs robustly and astrocytes in a limited fashion (<xref ref-type="bibr" rid="B35">35</xref>), and cells located nearby initiate a signaling cascade that amplifies locally, and recruits additional immune cells from a distance. This idea of cellular crosstalk was investigated by Wang and Gabuzda, who saw that direct contact between neurons and microglia was not necessary for neuronal damage (<xref ref-type="bibr" rid="B135">135</xref>). The same study also found that activated astrocytes promoted HIV replication in microglia. In this regard, as discussed above, mTOR signaling in cultured cortical neurons preserves structural integrity, however increased mTOR activity can also be detrimental to cells of the brain (<xref ref-type="bibr" rid="B133">133</xref>, <xref ref-type="bibr" rid="B134">134</xref>, <xref ref-type="bibr" rid="B136">136</xref>). Cortical neurons, as well as infected microglia may, in turn, be upregulate and secrete OPN/SPP1 to reduce the inflammatory response by inactivating the NLRP3 inflammasome in microglia, and promoting neuronal survival through mTOR activity. Decreased mTOR activity in astrocytes is primarily beneficial, but negatively affects their ability to differentiate (<xref ref-type="bibr" rid="B133">133</xref>, <xref ref-type="bibr" rid="B134">134</xref>, <xref ref-type="bibr" rid="B136">136</xref>). In oligodendrocytes, decreased mTOR activity impairs their differentiation and myelination functions (<xref ref-type="bibr" rid="B133">133</xref>, <xref ref-type="bibr" rid="B134">134</xref>, <xref ref-type="bibr" rid="B136">136</xref>). The release of damage signals and proinflammatory molecules from impaired glial cells, activates immune cells and neurons thus amplifying a neuroinflammatory response. An example being the rapid release of IL-1&#x3b2; and IL-18 from microglial pyroptosis (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). We emphasize the importance of considering that homeostasis in chronic low-level HIV infection is tightly regulated via crosstalk between different cells through secreted pro- and anti-inflammatory cytokines/chemokines. The delicate balance, or lack thereof, of a cellular local environment, can act to exacerbate or ameliorate neuroinflammation. Indeed, HIV utilizes these delicate communication pathways to promote an optimal environment for replication.</p>
<p>Given that microglia have receptors for OPN, it&#x2019;s possible that signaling by cortical OPN/SPP1 via mTOR acts on microglia to reduce the inflammatory response and increase transcriptional programs involved in preserving neuronal function. Given their opposing, yet collaborative, roles in inflammation, it is important to investigate the relationship between <italic>SPP1/</italic>OPN, mTOR, and NLRP3 in HIV-induced neuroinflammation and NeuroHIV. In this regard, more research is needed to get a better understanding of the molecular and cellular mechanisms that take place in chronic HIV infection. Doing so would allow us to understand better how HIV manipulates the host&#x2019;s protective measures, allowing for better treatments aimed to improve the host response to latent HIV infection, guiding us toward a solution to eliminate HIV-associated neuroinflammation and cognitive deficits.</p>
</sec>
<sec id="s6" sec-type="discussion">
<title>Discussion</title>
<p>There is a greater appreciation that during development and adulthood, dynamic homeostatic regulation of the brain&#x2019;s neural network is intertwined with and dependent on crosstalk and connectivity with glial. Disruption of the integrity of the brain, as seen in viral infection, leads to activation of what are meant to be protective responses, resulting in a neuroinflammatory response involving resident brain cells and immune sentinels that conduct tissue-level surveillance. As reviewed herein, innate immune signaling, including mTOR, SPP1/OPN, and NLRP3 inflammasome activation, is initiated to monitor and/or alter cell metabolic state, stimulate repair, migration, and other immune effector processes. Given that several myeloid and glial cells and cofactors can contribute and stimulate autocrine and paracrine feedback and feed-forward looping, how are the outputs integrated to restore homeostatic levels of regulation and surveillance? Deeper insight into the physiological, cellular, and molecular mechanisms will help to advance the development of effective interventions to help those suffering from neurological and neuropsychiatric comorbidities related to chronic over-activated innate immune responses in the central nervous system.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>AB: Conceptualization, Funding acquisition, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. CA: Conceptualization, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing.</p>
</sec>
</body>
<back>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was supported by the National Institutes of Health, National Institutes of Neurological Disorders and Stroke, R01NS102006 and R21 MH128152 to AB.</p>
</sec>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors&#xa0;and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<label>1</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Navia</surname> <given-names>BA</given-names>
</name>
<name>
<surname>Jordan</surname> <given-names>BD</given-names>
</name>
<name>
<surname>Price</surname> <given-names>RW</given-names>
</name>
</person-group>. <article-title>The AIDS dementia ocmplex: I. Clinical features</article-title>. <source>Ann Neurol</source>. (<year>1986</year>) <volume>19</volume>:<page-range>517&#x2013;24</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/ana.410190602</pub-id>
</citation>
</ref>
<ref id="B2">
<label>2</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saylor</surname> <given-names>D</given-names>
</name>
<name>
<surname>Dickens</surname> <given-names>AM</given-names>
</name>
<name>
<surname>Sacktor</surname> <given-names>N</given-names>
</name>
<name>
<surname>Haughey</surname> <given-names>N</given-names>
</name>
<name>
<surname>Slusher</surname> <given-names>B</given-names>
</name>
<name>
<surname>Pletnikov</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>HIV-associated neurocognitive disorder - pathogenesis and prospects for treatment</article-title>. <source>Nat Rev Neurol</source>. (<year>2016</year>) <volume>12</volume>:<page-range>234&#x2013;48</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/nrneurol.2016.27</pub-id>
</citation>
</ref>
<ref id="B3">
<label>3</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rubin</surname> <given-names>LH</given-names>
</name>
<name>
<surname>Li</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Fitzgerald</surname> <given-names>KC</given-names>
</name>
<name>
<surname>Dastgheyb</surname> <given-names>R</given-names>
</name>
<name>
<surname>Spence</surname> <given-names>AB</given-names>
</name>
<name>
<surname>Maki</surname> <given-names>PM</given-names>
</name>
<etal/>
</person-group>. <article-title>Associations between antiretrovirals and cognitive function in women with HIV</article-title>. <source>J Neuroimmune Pharmacol</source>. (<year>2021</year>) <volume>16</volume>:<fpage>195</fpage>&#x2013;<lpage>206</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s11481-020-09910-1</pub-id>
</citation>
</ref>
<ref id="B4">
<label>4</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mastrorosa</surname> <given-names>I</given-names>
</name>
<name>
<surname>Pinnetti</surname> <given-names>C</given-names>
</name>
<name>
<surname>Brita</surname> <given-names>AC</given-names>
</name>
<name>
<surname>Mondi</surname> <given-names>A</given-names>
</name>
<name>
<surname>Lorenzini</surname> <given-names>P</given-names>
</name>
<name>
<surname>Del Duca</surname> <given-names>G</given-names>
</name>
<etal/>
</person-group>. <article-title>Declining prevalence of human immunodeficiency virus (HIV)-associated neurocognitive disorders in recent years and associated factors in a large cohort of antiretroviral therapy-treated individuals with HIV</article-title>. <source>Clin Infect Dis</source>. (<year>2023</year>) <volume>76</volume>:<page-range>e629&#x2013;37</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/cid/ciac658</pub-id>
</citation>
</ref>
<ref id="B5">
<label>5</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Elicer</surname> <given-names>IM</given-names>
</name>
<name>
<surname>Byrd</surname> <given-names>D</given-names>
</name>
<name>
<surname>Clark</surname> <given-names>US</given-names>
</name>
<name>
<surname>Morgello</surname> <given-names>S</given-names>
</name>
<name>
<surname>Robinson-Papp</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Motor function declines over time in human immunodeficiency virus and is associated with cerebrovascular disease, while HIV-associated neurocognitive disorder remains stable</article-title>. <source>J Neurovirol</source>. (<year>2018</year>) <volume>24</volume>:<page-range>514&#x2013;22</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s13365-018-0640-6</pub-id>
</citation>
</ref>
<ref id="B6">
<label>6</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Vance</surname> <given-names>DE</given-names>
</name>
<name>
<surname>Del Bene</surname> <given-names>VA</given-names>
</name>
<name>
<surname>Frank</surname> <given-names>JS</given-names>
</name>
<name>
<surname>Billings</surname> <given-names>R</given-names>
</name>
<name>
<surname>Triebel</surname> <given-names>K</given-names>
</name>
<name>
<surname>Buchholz</surname> <given-names>A</given-names>
</name>
<etal/>
</person-group>. <article-title>Cognitive intra-individual variability in HIV: an integrative review</article-title>. <source>Neuropsychol Rev</source>. (<year>2021</year>) <volume>32</volume>:<page-range>855&#x2013;76</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s11065-021-09528-x</pub-id>
</citation>
</ref>
<ref id="B7">
<label>7</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nottet</surname> <given-names>HS</given-names>
</name>
</person-group>. <article-title>Interactions between macrophages and brain microvascular endothelial cells: role in pathogenesis of HIV-1 infection and blood - brain barrier function</article-title>. <source>J Neurovirol</source>. (<year>1999</year>) <volume>5</volume>:<page-range>659&#x2013;69</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.3109/13550289909021294</pub-id>
</citation>
</ref>
<ref id="B8">
<label>8</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gendelman</surname> <given-names>HE</given-names>
</name>
<name>
<surname>Orenstein</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Baca</surname> <given-names>LM</given-names>
</name>
<name>
<surname>Weiser</surname> <given-names>B</given-names>
</name>
<name>
<surname>Burger</surname> <given-names>H</given-names>
</name>
<name>
<surname>Kalter</surname> <given-names>DC</given-names>
</name>
<etal/>
</person-group>. <article-title>The macrophage in the persistence and pathogenesis of HIV infection</article-title>. <source>AIDS</source>. (<year>1989</year>) <volume>3</volume>:<page-range>475&#x2013;96</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1097/00002030-198908000-00001</pub-id>
</citation>
</ref>
<ref id="B9">
<label>9</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koenig</surname> <given-names>S</given-names>
</name>
<name>
<surname>Gendelman</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Orenstein</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Dal Canto</surname> <given-names>M</given-names>
</name>
<name>
<surname>Pezeshkpour</surname> <given-names>GH</given-names>
</name>
<name>
<surname>Yungbluth</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Detection of AIDS virus in macrophages in brain tissue from AIDS patients with encephalopathy</article-title>. <source>Science</source>. (<year>1986</year>) <volume>233</volume>:<page-range>1089&#x2013;93</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1126/science.3016903</pub-id>
</citation>
</ref>
<ref id="B10">
<label>10</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Meltzer</surname> <given-names>MS</given-names>
</name>
<name>
<surname>Nakamura</surname> <given-names>M</given-names>
</name>
<name>
<surname>Hansen</surname> <given-names>BD</given-names>
</name>
<name>
<surname>Turpin</surname> <given-names>JA</given-names>
</name>
<name>
<surname>Kalter</surname> <given-names>DC</given-names>
</name>
<name>
<surname>Gendelman</surname> <given-names>HE</given-names>
</name>
</person-group>. <article-title>Macrophages as susceptible targets for HIV infection, persistent viral reservoirs in tissue, and key immunoregulatory cells that control levels of virus replication and extent of disease</article-title>. <source>AIDS Res Hum Retroviruses</source>. (<year>1990</year>) <volume>6</volume>:<page-range>967&#x2013;71</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1089/aid.1990.6.967</pub-id>
</citation>
</ref>
<ref id="B11">
<label>11</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Langford</surname> <given-names>D</given-names>
</name>
<name>
<surname>Masliah</surname> <given-names>E</given-names>
</name>
</person-group>. <article-title>Crosstalk between components of the blood brain barrier and cells of the CNS in microglial activation in AIDS</article-title>. <source>Brain Pathol</source>. (<year>2001</year>) <volume>11</volume>:<page-range>306&#x2013;12</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/j.1750-3639.2001.tb00401.x</pub-id>
</citation>
</ref>
<ref id="B12">
<label>12</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Persidsky</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Stins</surname> <given-names>M</given-names>
</name>
<name>
<surname>Way</surname> <given-names>D</given-names>
</name>
<name>
<surname>Witte</surname> <given-names>MH</given-names>
</name>
<name>
<surname>Weinand</surname> <given-names>M</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>KS</given-names>
</name>
<etal/>
</person-group>. <article-title>A model for monocyte migration through the blood-brain barrier during HIV-1 encephalitis</article-title>. <source>J Immunol</source>. (<year>1997</year>) <volume>158</volume>:<page-range>3499&#x2013;510</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.4049/jimmunol.158.7.3499</pub-id>
</citation>
</ref>
<ref id="B13">
<label>13</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Roberts</surname> <given-names>TK</given-names>
</name>
<name>
<surname>Buckner</surname> <given-names>CM</given-names>
</name>
<name>
<surname>Berman</surname> <given-names>JW</given-names>
</name>
</person-group>. <article-title>Leukocyte transmigration across the blood-brain barrier: perspectives on neuroAIDS</article-title>. <source>Front Biosci</source>. (<year>2010</year>) <volume>15</volume>:<fpage>478</fpage>&#x2013;<lpage>536</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.2741/3631</pub-id>
</citation>
</ref>
<ref id="B14">
<label>14</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bertrand</surname> <given-names>L</given-names>
</name>
<name>
<surname>Cho</surname> <given-names>HJ</given-names>
</name>
<name>
<surname>Toborek</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Blood-brain barrier pericytes as a target for HIV-1 infection</article-title>. <source>Brain</source>. (<year>2019</year>) <volume>142</volume>:<page-range>502&#x2013;11</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/brain/awy339</pub-id>
</citation>
</ref>
<ref id="B15">
<label>15</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Perelson</surname> <given-names>AS</given-names>
</name>
<name>
<surname>Neumann</surname> <given-names>AU</given-names>
</name>
<name>
<surname>Markowitz</surname> <given-names>M</given-names>
</name>
<name>
<surname>Leonard</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Ho</surname> <given-names>DD</given-names>
</name>
</person-group>. <article-title>HIV-1 dynamics <italic>in vivo</italic>: virion clearance rate, infected cell life-span, and viral generation time</article-title>. <source>Science</source>. (<year>1996</year>) <volume>271</volume>:<page-range>1582&#x2013;6</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1126/science.271.5255.1582</pub-id>
</citation>
</ref>
<ref id="B16">
<label>16</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Oliveira</surname> <given-names>MF</given-names>
</name>
<name>
<surname>Chaillon</surname> <given-names>A</given-names>
</name>
<name>
<surname>Nakazawa</surname> <given-names>M</given-names>
</name>
<name>
<surname>Vargas</surname> <given-names>M</given-names>
</name>
<name>
<surname>Letendre</surname> <given-names>SL</given-names>
</name>
<name>
<surname>Strain</surname> <given-names>MC</given-names>
</name>
<etal/>
</person-group>. <article-title>Early antiretroviral therapy is associated with lower HIV DNA molecular diversity and lower inflammation in cerebrospinal fluid but does not prevent the establishment of compartmentalized HIV DNA populations</article-title>. <source>PloS Pathog</source>. (<year>2017</year>) <volume>13</volume>:<elocation-id>e1006112</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1371/journal.ppat.1006112</pub-id>
</citation>
</ref>
<ref id="B17">
<label>17</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Livelli</surname> <given-names>A</given-names>
</name>
<name>
<surname>Vaida</surname> <given-names>F</given-names>
</name>
<name>
<surname>Ellis</surname> <given-names>RJ</given-names>
</name>
<name>
<surname>Ma</surname> <given-names>Q</given-names>
</name>
<name>
<surname>Ferrara</surname> <given-names>M</given-names>
</name>
<name>
<surname>Clifford</surname> <given-names>DB</given-names>
</name>
<etal/>
</person-group>. <article-title>Correlates of HIV RNA concentrations in cerebrospinal fluid during antiretroviral therapy: a longitudinal cohort study</article-title>. <source>Lancet HIV</source>. (<year>2019</year>) <volume>6</volume>:<page-range>e456&#x2013;62</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/S2352-3018(19)30143-2</pub-id>
</citation>
</ref>
<ref id="B18">
<label>18</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cysique</surname> <given-names>LA</given-names>
</name>
<name>
<surname>Brew</surname> <given-names>BJ</given-names>
</name>
</person-group>. <article-title>Comorbid depression and apathy in HIV-associated neurocognitive disorders in the era of chronic HIV infection</article-title>. <source>Handb Clin Neurol</source>. (<year>2019</year>) <volume>165</volume>:<fpage>71</fpage>&#x2013;<lpage>82</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/B978-0-444-64012-3.00006-X</pub-id>
</citation>
</ref>
<ref id="B19">
<label>19</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gomez Perdiguero</surname> <given-names>E</given-names>
</name>
<name>
<surname>Klapproth</surname> <given-names>K</given-names>
</name>
<name>
<surname>Schulz</surname> <given-names>C</given-names>
</name>
<name>
<surname>Busch</surname> <given-names>K</given-names>
</name>
<name>
<surname>Azzoni</surname> <given-names>E</given-names>
</name>
<name>
<surname>Crozet</surname> <given-names>L</given-names>
</name>
<etal/>
</person-group>. <article-title>Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors</article-title>. <source>Nature</source>. (<year>2015</year>) <volume>518</volume>:<page-range>547&#x2013;51</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/nature13989</pub-id>
</citation>
</ref>
<ref id="B20">
<label>20</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kierdorf</surname> <given-names>K</given-names>
</name>
<name>
<surname>Masuda</surname> <given-names>T</given-names>
</name>
<name>
<surname>Jordao</surname> <given-names>MJC</given-names>
</name>
<name>
<surname>Prinz</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Macrophages at CNS interfaces: ontogeny and function in health and disease</article-title>. <source>Nat Rev Neurosci</source>. (<year>2019</year>) <volume>20</volume>:<page-range>547&#x2013;62</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41583-019-0201-x</pub-id>
</citation>
</ref>
<ref id="B21">
<label>21</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Prinz</surname> <given-names>M</given-names>
</name>
<name>
<surname>Jung</surname> <given-names>S</given-names>
</name>
<name>
<surname>Priller</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Microglia biology: one century of evolving concepts</article-title>. <source>Cell</source>. (<year>2019</year>) <volume>179</volume>:<fpage>292</fpage>&#x2013;<lpage>311</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cell.2019.08.053</pub-id>
</citation>
</ref>
<ref id="B22">
<label>22</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Spudich</surname> <given-names>S</given-names>
</name>
<name>
<surname>Robertson</surname> <given-names>KR</given-names>
</name>
<name>
<surname>Bosch</surname> <given-names>RJ</given-names>
</name>
<name>
<surname>Gandhi</surname> <given-names>RT</given-names>
</name>
<name>
<surname>Cyktor</surname> <given-names>JC</given-names>
</name>
<name>
<surname>Mar</surname> <given-names>H</given-names>
</name>
<etal/>
</person-group>. <article-title>Persistent HIV-infected cells in cerebrospinal fluid are associated with poorer neurocognitive performance</article-title>. <source>J Clin Invest</source>. (<year>2019</year>) <volume>129</volume>:<page-range>3339&#x2013;46</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1172/JCI127413</pub-id>
</citation>
</ref>
<ref id="B23">
<label>23</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ellis</surname> <given-names>RJ</given-names>
</name>
<name>
<surname>Marquine</surname> <given-names>MJ</given-names>
</name>
<name>
<surname>Kaul</surname> <given-names>M</given-names>
</name>
<name>
<surname>Fields</surname> <given-names>JA</given-names>
</name>
<name>
<surname>Schlachetzki</surname> <given-names>JCM</given-names>
</name>
</person-group>. <article-title>Mechanisms underlying HIV-associated cognitive impairment and emerging therapies for its management</article-title>. <source>Nat Rev Neurol</source>. (<year>2023</year>) <volume>19</volume>:<page-range>668&#x2013;87</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41582-023-00879-y</pub-id>
</citation>
</ref>
<ref id="B24">
<label>24</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saez-Cirion</surname> <given-names>A</given-names>
</name>
<name>
<surname>Manel</surname> <given-names>N</given-names>
</name>
</person-group>. <article-title>Immune responses to retroviruses</article-title>. <source>Annu Rev Immunol</source>. (<year>2018</year>) <volume>36</volume>:<fpage>193</fpage>&#x2013;<lpage>220</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1146/annurev-immunol-051116-052155</pub-id>
</citation>
</ref>
<ref id="B25">
<label>25</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Moir</surname> <given-names>S</given-names>
</name>
<name>
<surname>Chun</surname> <given-names>TW</given-names>
</name>
<name>
<surname>Fauci</surname> <given-names>AS</given-names>
</name>
</person-group>. <article-title>Pathogenic mechanisms of HIV disease</article-title>. <source>Annu Rev Pathol</source>. (<year>2011</year>) <volume>6</volume>:<page-range>223&#x2013;48</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1146/annurev-pathol-011110-130254</pub-id>
</citation>
</ref>
<ref id="B26">
<label>26</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Scully</surname> <given-names>EP</given-names>
</name>
<name>
<surname>Lockhart</surname> <given-names>A</given-names>
</name>
<name>
<surname>Garcia-Beltran</surname> <given-names>W</given-names>
</name>
<name>
<surname>Palmer</surname> <given-names>CD</given-names>
</name>
<name>
<surname>Musante</surname> <given-names>C</given-names>
</name>
<name>
<surname>Rosenberg</surname> <given-names>E</given-names>
</name>
<etal/>
</person-group>. <article-title>Innate immune reconstitution with suppression of HIV-1</article-title>. <source>JCI Insight</source>. (<year>2016</year>) <volume>1</volume>:<elocation-id>e85433</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1172/jci.insight.85433</pub-id>
</citation>
</ref>
<ref id="B27">
<label>27</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Spudich</surname> <given-names>SS</given-names>
</name>
</person-group>. <article-title>Immune activation in the central nervous system throughout the course of HIV infection</article-title>. <source>Curr Opin HIV AIDS</source>. (<year>2016</year>) <volume>11</volume>:<page-range>226&#x2013;33</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1097/COH.0000000000000243</pub-id>
</citation>
</ref>
<ref id="B28">
<label>28</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Altfeld</surname> <given-names>M</given-names>
</name>
<name>
<surname>Gale</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Innate immunity against HIV-1 infection</article-title>. <source>Nat Immunol</source>. (<year>2015</year>) <volume>16</volume>:<page-range>554&#x2013;62</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/ni.3157</pub-id>
</citation>
</ref>
<ref id="B29">
<label>29</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chin</surname> <given-names>CR</given-names>
</name>
<name>
<surname>Perreira</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Savidis</surname> <given-names>G</given-names>
</name>
<name>
<surname>Portmann</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Aker</surname> <given-names>AM</given-names>
</name>
<name>
<surname>Feeley</surname> <given-names>EM</given-names>
</name>
<etal/>
</person-group>. <article-title>Direct visualization of HIV-1 replication intermediates shows that capsid and CPSF6 modulate HIV-1 intra-nuclear invasion and integration</article-title>. <source>Cell Rep</source>. (<year>2015</year>) <volume>13</volume>:<page-range>1717&#x2013;31</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.celrep.2015.10.036</pub-id>
</citation>
</ref>
<ref id="B30">
<label>30</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Muller</surname> <given-names>TG</given-names>
</name>
<name>
<surname>Zila</surname> <given-names>V</given-names>
</name>
<name>
<surname>Muller</surname> <given-names>B</given-names>
</name>
<name>
<surname>Krausslich</surname> <given-names>HG</given-names>
</name>
</person-group>. <article-title>Nuclear capsid uncoating and reverse transcription of HIV-1</article-title>. <source>Annu Rev Virol</source>. (<year>2022</year>) <volume>9</volume>:<page-range>261&#x2013;84</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1146/annurev-virology-020922-110929</pub-id>
</citation>
</ref>
<ref id="B31">
<label>31</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Peng</surname> <given-names>K</given-names>
</name>
<name>
<surname>Muranyi</surname> <given-names>W</given-names>
</name>
<name>
<surname>Glass</surname> <given-names>B</given-names>
</name>
<name>
<surname>Laketa</surname> <given-names>V</given-names>
</name>
<name>
<surname>Yant</surname> <given-names>SR</given-names>
</name>
<name>
<surname>Tsai</surname> <given-names>L</given-names>
</name>
<etal/>
</person-group>. <article-title>Quantitative microscopy of functional HIV post-entry complexes reveals association of replication with the viral capsid</article-title>. <source>Elife</source>. (<year>2014</year>) <volume>3</volume>:<elocation-id>e04114</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.7554/eLife.04114</pub-id>
</citation>
</ref>
<ref id="B32">
<label>32</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Serrano</surname> <given-names>T</given-names>
</name>
<name>
<surname>Fremont</surname> <given-names>S</given-names>
</name>
<name>
<surname>Echard</surname> <given-names>A</given-names>
</name>
</person-group>. <article-title>Get in and get out: Remodeling of the cellular actin cytoskeleton upon HIV-1 infection</article-title>. <source>Biol Cell</source>. (<year>2023</year>) <volume>115</volume>:<elocation-id>e2200085</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/boc.202200085</pub-id>
</citation>
</ref>
<ref id="B33">
<label>33</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nickoloff-Bybel</surname> <given-names>EA</given-names>
</name>
<name>
<surname>Festa</surname> <given-names>L</given-names>
</name>
<name>
<surname>Meucci</surname> <given-names>O</given-names>
</name>
<name>
<surname>Gaskill</surname> <given-names>PJ</given-names>
</name>
</person-group>. <article-title>Co-receptor signaling in the pathogenesis of neuroHIV</article-title>. <source>Retrovirology</source>. (<year>2021</year>) <volume>18</volume>:<fpage>24</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12977-021-00569-x</pub-id>
</citation>
</ref>
<ref id="B34">
<label>34</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kulkosky</surname> <given-names>J</given-names>
</name>
<name>
<surname>Culnan</surname> <given-names>DM</given-names>
</name>
<name>
<surname>Roman</surname> <given-names>J</given-names>
</name>
<name>
<surname>Dornadula</surname> <given-names>G</given-names>
</name>
<name>
<surname>Schnell</surname> <given-names>M</given-names>
</name>
<name>
<surname>Boyd</surname> <given-names>MR</given-names>
</name>
<etal/>
</person-group>. <article-title>Prostratin: activation of latent HIV-1 expression suggests a potential inductive adjuvant therapy for HAART</article-title>. <source>Blood</source>. (<year>2001</year>) <volume>98</volume>:<page-range>3006&#x2013;15</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1182/blood.V98.10.3006</pub-id>
</citation>
</ref>
<ref id="B35">
<label>35</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wahl</surname> <given-names>A</given-names>
</name>
<name>
<surname>Al-Harthi</surname> <given-names>L</given-names>
</name>
</person-group>. <article-title>HIV infection of non-classical cells in the brain</article-title>. <source>Retrovirology</source>. (<year>2023</year>) <volume>20</volume>:<fpage>1</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12977-023-00616-9</pub-id>
</citation>
</ref>
<ref id="B36">
<label>36</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Williams</surname> <given-names>K</given-names>
</name>
<name>
<surname>Corey</surname> <given-names>S</given-names>
</name>
<name>
<surname>Westmoreland</surname> <given-names>SV</given-names>
</name>
<name>
<surname>Pauley</surname> <given-names>DR</given-names>
</name>
<name>
<surname>Knight</surname> <given-names>HL</given-names>
</name>
<name>
<surname>deBakker</surname> <given-names>C</given-names>
</name>
<etal/>
</person-group>. <article-title>Perivascular macrophages are the primary cell type productively infected by simian immunodeficiency virus in the brains of macaques: implications for the neuropathogenesis of AIDS</article-title>. <source>J Exp Med</source>. (<year>2001</year>) <volume>193</volume>:<page-range>905&#x2013;15</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1084/jem.193.8.905</pub-id>
</citation>
</ref>
<ref id="B37">
<label>37</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kierdorf</surname> <given-names>K</given-names>
</name>
<name>
<surname>Prinz</surname> <given-names>M</given-names>
</name>
<name>
<surname>Geissmann</surname> <given-names>F</given-names>
</name>
<name>
<surname>Gomez Perdiguero</surname> <given-names>E</given-names>
</name>
</person-group>. <article-title>Development and function of tissue resident macrophages in mice</article-title>. <source>Semin Immunol</source>. (<year>2015</year>) <volume>27</volume>:<page-range>369&#x2013;78</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.smim.2016.03.017</pub-id>
</citation>
</ref>
<ref id="B38">
<label>38</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Menassa</surname> <given-names>DA</given-names>
</name>
<name>
<surname>Gomez-Nicola</surname> <given-names>D</given-names>
</name>
</person-group>. <article-title>Microglial dynamics during human brain development</article-title>. <source>Front Immunol</source>. (<year>2018</year>) <volume>9</volume>:<elocation-id>1014</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2018.01014</pub-id>
</citation>
</ref>
<ref id="B39">
<label>39</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Parkhurst</surname> <given-names>CN</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>G</given-names>
</name>
<name>
<surname>Ninan</surname> <given-names>I</given-names>
</name>
<name>
<surname>Savas</surname> <given-names>JN</given-names>
</name>
<name>
<surname>Yates</surname> <given-names>JR</given-names> <suffix>3rd</suffix>
</name>
<name>
<surname>Lafaille</surname> <given-names>JJ</given-names>
</name>
<etal/>
</person-group>. <article-title>Microglia promote learning-dependent synapse formation through brain-derived neurotrophic factor</article-title>. <source>Cell</source>. (<year>2013</year>) <volume>155</volume>:<page-range>1596&#x2013;609</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cell.2013.11.030</pub-id>
</citation>
</ref>
<ref id="B40">
<label>40</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nightingale</surname> <given-names>S</given-names>
</name>
<name>
<surname>Ances</surname> <given-names>B</given-names>
</name>
<name>
<surname>Cinque</surname> <given-names>P</given-names>
</name>
<name>
<surname>Dravid</surname> <given-names>A</given-names>
</name>
<name>
<surname>Dreyer</surname> <given-names>AJ</given-names>
</name>
<name>
<surname>Gisslen</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Cognitive impairment in people living with HIV: consensus recommendations for a new approach</article-title>. <source>Nat Rev Neurol</source>. (<year>2023</year>) <volume>19</volume>:<page-range>424&#x2013;33</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41582-023-00813-2</pub-id>
</citation>
</ref>
<ref id="B41">
<label>41</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Valdez</surname> <given-names>AN</given-names>
</name>
<name>
<surname>Rubin</surname> <given-names>LH</given-names>
</name>
<name>
<surname>Neigh</surname> <given-names>GN</given-names>
</name>
</person-group>. <article-title>Untangling the Gordian knot of HIV, stress, and cognitive impairment</article-title>. <source>Neurobiol Stress</source>. (<year>2016</year>) <volume>4</volume>:<fpage>44</fpage>&#x2013;<lpage>54</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.ynstr.2016.02.005</pub-id>
</citation>
</ref>
<ref id="B42">
<label>42</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cho</surname> <given-names>MH</given-names>
</name>
<name>
<surname>Cho</surname> <given-names>K</given-names>
</name>
<name>
<surname>Kang</surname> <given-names>HJ</given-names>
</name>
<name>
<surname>Jeon</surname> <given-names>EY</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>HS</given-names>
</name>
<name>
<surname>Kwon</surname> <given-names>HJ</given-names>
</name>
<etal/>
</person-group>. <article-title>Autophagy in microglia degrades extracellular beta-amyloid fibrils and regulates the NLRP3 inflammasome</article-title>. <source>Autophagy</source>. (<year>2014</year>) <volume>10</volume>:<page-range>1761&#x2013;75</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.4161/auto.29647</pub-id>
</citation>
</ref>
<ref id="B43">
<label>43</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Halle</surname> <given-names>A</given-names>
</name>
<name>
<surname>Hornung</surname> <given-names>V</given-names>
</name>
<name>
<surname>Petzold</surname> <given-names>GC</given-names>
</name>
<name>
<surname>Stewart</surname> <given-names>CR</given-names>
</name>
<name>
<surname>Monks</surname> <given-names>BG</given-names>
</name>
<name>
<surname>Reinheckel</surname> <given-names>T</given-names>
</name>
<etal/>
</person-group>. <article-title>The NALP3 inflammasome is involved in the innate immune response to amyloid-beta</article-title>. <source>Nat Immunol</source>. (<year>2008</year>) <volume>9</volume>:<page-range>857&#x2013;65</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/ni.1636</pub-id>
</citation>
</ref>
<ref id="B44">
<label>44</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jha</surname> <given-names>S</given-names>
</name>
<name>
<surname>Srivastava</surname> <given-names>SY</given-names>
</name>
<name>
<surname>Brickey</surname> <given-names>WJ</given-names>
</name>
<name>
<surname>Iocca</surname> <given-names>H</given-names>
</name>
<name>
<surname>Toews</surname> <given-names>A</given-names>
</name>
<name>
<surname>Morrison</surname> <given-names>JP</given-names>
</name>
<etal/>
</person-group>. <article-title>The inflammasome sensor, NLRP3, regulates CNS inflammation and demyelination via caspase-1 and interleukin-18</article-title>. <source>J Neurosci</source>. (<year>2010</year>) <volume>30</volume>:<page-range>15811&#x2013;20</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1523/JNEUROSCI.4088-10.2010</pub-id>
</citation>
</ref>
<ref id="B45">
<label>45</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Panicker</surname> <given-names>N</given-names>
</name>
<name>
<surname>Kam</surname> <given-names>TI</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>H</given-names>
</name>
<name>
<surname>Neifert</surname> <given-names>S</given-names>
</name>
<name>
<surname>Chou</surname> <given-names>SC</given-names>
</name>
<name>
<surname>Kumar</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Neuronal NLRP3 is a parkin substrate that drives neurodegeneration in Parkinson's disease</article-title>. <source>Neuron</source>. (<year>2022</year>) <volume>110</volume>:<fpage>2422</fpage>&#x2013;<lpage>37.e9</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.neuron.2022.05.009</pub-id>
</citation>
</ref>
<ref id="B46">
<label>46</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shi</surname> <given-names>F</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>L</given-names>
</name>
<name>
<surname>Kouadir</surname> <given-names>M</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>J</given-names>
</name>
<name>
<surname>Zhou</surname> <given-names>X</given-names>
</name>
<etal/>
</person-group>. <article-title>The NALP3 inflammasome is involved in neurotoxic prion peptide-induced microglial activation</article-title>. <source>J Neuroinflamm</source>. (<year>2012</year>) <volume>9</volume>:<fpage>73</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/1742-2094-9-73</pub-id>
</citation>
</ref>
<ref id="B47">
<label>47</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>von Herrmann</surname> <given-names>KM</given-names>
</name>
<name>
<surname>Anderson</surname> <given-names>FL</given-names>
</name>
<name>
<surname>Martinez</surname> <given-names>EM</given-names>
</name>
<name>
<surname>Young</surname> <given-names>AL</given-names>
</name>
<name>
<surname>Havrda</surname> <given-names>MC</given-names>
</name>
</person-group>. <article-title>Slc6a3-dependent expression of a CAPS-associated Nlrp3 allele results in progressive behavioral abnormalities and neuroinflammation in aging mice</article-title>. <source>J Neuroinflamm</source>. (<year>2020</year>) <volume>17</volume>:<fpage>213</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12974-020-01866-6</pub-id>
</citation>
</ref>
<ref id="B48">
<label>48</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Min</surname> <given-names>AK</given-names>
</name>
<name>
<surname>Fortune</surname> <given-names>T</given-names>
</name>
<name>
<surname>Rodriguez</surname> <given-names>N</given-names>
</name>
<name>
<surname>Hedge</surname> <given-names>E</given-names>
</name>
<name>
<surname>Swartz</surname> <given-names>TH</given-names>
</name>
</person-group>. <article-title>Inflammasomes as mediators of inflammation in HIV-1 Infection</article-title>. <source>Transl Res</source>. (<year>2022</year>) <volume>252</volume>:<fpage>1</fpage>&#x2013;<lpage>8</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.trsl.2022.07.008</pub-id>
</citation>
</ref>
<ref id="B49">
<label>49</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Martinon</surname> <given-names>F</given-names>
</name>
<name>
<surname>Burns</surname> <given-names>K</given-names>
</name>
<name>
<surname>Tschopp</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>The inflammasome: a molecular platform triggering activation of inflammatory caspases and processing of proIL-beta</article-title>. <source>Mol Cell</source>. (<year>2002</year>) <volume>10</volume>:<page-range>417&#x2013;26</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/S1097-2765(02)00599-3</pub-id>
</citation>
</ref>
<ref id="B50">
<label>50</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Aganna</surname> <given-names>E</given-names>
</name>
<name>
<surname>Martinon</surname> <given-names>F</given-names>
</name>
<name>
<surname>Hawkins</surname> <given-names>PN</given-names>
</name>
<name>
<surname>Ross</surname> <given-names>JB</given-names>
</name>
<name>
<surname>Swan</surname> <given-names>DC</given-names>
</name>
<name>
<surname>Booth</surname> <given-names>DR</given-names>
</name>
<etal/>
</person-group>. <article-title>Association of mutations in the NALP3/CIAS1/PYPAF1 gene with a broad phenotype including recurrent fever, cold sensitivity, sensorineural deafness, and AA amyloidosis</article-title>. <source>Arthritis Rheum</source>. (<year>2002</year>) <volume>46</volume>:<page-range>2445&#x2013;52</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/art.10509</pub-id>
</citation>
</ref>
<ref id="B51">
<label>51</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hoffman</surname> <given-names>HM</given-names>
</name>
<name>
<surname>Mueller</surname> <given-names>JL</given-names>
</name>
<name>
<surname>Broide</surname> <given-names>DH</given-names>
</name>
<name>
<surname>Wanderer</surname> <given-names>AA</given-names>
</name>
<name>
<surname>Kolodner</surname> <given-names>RD</given-names>
</name>
</person-group>. <article-title>Mutation of a new gene encoding a putative pyrin-like protein causes familial cold autoinflammatory syndrome and Muckle-Wells syndrome</article-title>. <source>Nat Genet</source>. (<year>2001</year>) <volume>29</volume>:<page-range>301&#x2013;5</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/ng756</pub-id>
</citation>
</ref>
<ref id="B52">
<label>52</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Manji</surname> <given-names>GA</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>L</given-names>
</name>
<name>
<surname>Geddes</surname> <given-names>BJ</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>M</given-names>
</name>
<name>
<surname>Merriam</surname> <given-names>S</given-names>
</name>
<name>
<surname>Al-Garawi</surname> <given-names>A</given-names>
</name>
<etal/>
</person-group>. <article-title>PYPAF1, a PYRIN-containing Apaf1-like protein that assembles with ASC and regulates activation of NF-kappa B</article-title>. <source>J Biol Chem</source>. (<year>2002</year>) <volume>277</volume>:<page-range>11570&#x2013;5</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1074/jbc.M112208200</pub-id>
</citation>
</ref>
<ref id="B53">
<label>53</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ara&#xed;nga</surname> <given-names>M</given-names>
</name>
<name>
<surname>Su</surname> <given-names>H</given-names>
</name>
<name>
<surname>Poluektova</surname> <given-names>LY</given-names>
</name>
<name>
<surname>Gorantla</surname> <given-names>S</given-names>
</name>
<name>
<surname>Gendelman</surname> <given-names>HE</given-names>
</name>
</person-group>. <article-title>HIV-1 cellular and tissue replication patterns in infected humanized mice</article-title>. <source>Sci Rep</source>. (<year>2016</year>) <volume>6</volume>:<fpage>23513</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/srep23513</pub-id>
</citation>
</ref>
<ref id="B54">
<label>54</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sutterwala</surname> <given-names>FS</given-names>
</name>
<name>
<surname>Ogura</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Szczepanik</surname> <given-names>M</given-names>
</name>
<name>
<surname>Lara-Tejero</surname> <given-names>M</given-names>
</name>
<name>
<surname>Lichtenberger</surname> <given-names>GS</given-names>
</name>
<name>
<surname>Grant</surname> <given-names>EP</given-names>
</name>
<etal/>
</person-group>. <article-title>Critical role for NALP3/CIAS1/Cryopyrin in innate and adaptive immunity through its regulation of caspase-1</article-title>. <source>Immunity</source>. (<year>2006</year>) <volume>24</volume>:<page-range>317&#x2013;27</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.immuni.2006.02.004</pub-id>
</citation>
</ref>
<ref id="B55">
<label>55</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dinarello</surname> <given-names>CA</given-names>
</name>
</person-group>. <article-title>Biologic basis for interleukin-1 in disease</article-title>. <source>Blood</source>. (<year>1996</year>) <volume>87</volume>:<page-range>2095&#x2013;147</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1182/blood.V87.6.2095.bloodjournal8762095</pub-id>
</citation>
</ref>
<ref id="B56">
<label>56</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Voet</surname> <given-names>S</given-names>
</name>
<name>
<surname>Srinivasan</surname> <given-names>S</given-names>
</name>
<name>
<surname>Lamkanfi</surname> <given-names>M</given-names>
</name>
<name>
<surname>van Loo</surname> <given-names>G</given-names>
</name>
</person-group>. <article-title>Inflammasomes in neuroinflammatory and neurodegenerative diseases</article-title>. <source>EMBO Mol Med</source>. (<year>2019</year>) <volume>11</volume>:<elocation-id>e10248</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.15252/emmm.201810248</pub-id>
</citation>
</ref>
<ref id="B57">
<label>57</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dinarello</surname> <given-names>CA</given-names>
</name>
</person-group>. <article-title>IL-18: A TH1-inducing, proinflammatory cytokine and new member of the IL-1 family</article-title>. <source>J Allergy Clin Immunol</source>. (<year>1999</year>) <volume>103</volume>:<fpage>11</fpage>&#x2013;<lpage>24</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/S0091-6749(99)70518-X</pub-id>
</citation>
</ref>
<ref id="B58">
<label>58</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mariathasan</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>ASC, Ipaf and Cryopyrin/Nalp3: bona fide intracellular adapters of the caspase-1 inflammasome</article-title>. <source>Microbes Infect</source>. (<year>2007</year>) <volume>9</volume>:<page-range>664&#x2013;71</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.micinf.2007.01.017</pub-id>
</citation>
</ref>
<ref id="B59">
<label>59</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Song</surname> <given-names>L</given-names>
</name>
<name>
<surname>Pei</surname> <given-names>L</given-names>
</name>
<name>
<surname>Yao</surname> <given-names>S</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Shang</surname> <given-names>Y</given-names>
</name>
</person-group>. <article-title>NLRP3 inflammasome in neurological diseases, from functions to therapies</article-title>. <source>Front Cell Neurosci</source>. (<year>2017</year>) <volume>11</volume>:<elocation-id>63</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fncel.2017.00063</pub-id>
</citation>
</ref>
<ref id="B60">
<label>60</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sim</surname> <given-names>J</given-names>
</name>
<name>
<surname>Park</surname> <given-names>J</given-names>
</name>
<name>
<surname>Moon</surname> <given-names>JS</given-names>
</name>
<name>
<surname>Lim</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Dysregulation of inflammasome activation in glioma</article-title>. <source>Cell Commun Signal</source>. (<year>2023</year>) <volume>21</volume>:<fpage>239</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12964-023-01255-5</pub-id>
</citation>
</ref>
<ref id="B61">
<label>61</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bauernfeind</surname> <given-names>FG</given-names>
</name>
<name>
<surname>Horvath</surname> <given-names>G</given-names>
</name>
<name>
<surname>Stutz</surname> <given-names>A</given-names>
</name>
<name>
<surname>Alnemri</surname> <given-names>ES</given-names>
</name>
<name>
<surname>MacDonald</surname> <given-names>K</given-names>
</name>
<name>
<surname>Speert</surname> <given-names>D</given-names>
</name>
<etal/>
</person-group>. <article-title>Cutting edge: NF-kappaB activating pattern recognition and cytokine receptors license NLRP3 inflammasome activation by regulating NLRP3 expression</article-title>. <source>J Immunol</source>. (<year>2009</year>) <volume>183</volume>:<page-range>787&#x2013;91</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.4049/jimmunol.0901363</pub-id>
</citation>
</ref>
<ref id="B62">
<label>62</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kawai</surname> <given-names>T</given-names>
</name>
<name>
<surname>Akira</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>TLR signaling</article-title>. <source>Cell Death Differ</source>. (<year>2006</year>) <volume>13</volume>:<page-range>816&#x2013;25</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/sj.cdd.4401850</pub-id>
</citation>
</ref>
<ref id="B63">
<label>63</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Calvez</surname> <given-names>M</given-names>
</name>
<name>
<surname>Hseeh</surname> <given-names>G</given-names>
</name>
<name>
<surname>Benzer</surname> <given-names>S</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>AM</given-names>
</name>
</person-group>. <article-title>Osteopontin counters human immunodeficiency virus type 1-induced impairment of neurite growth through mammalian target of rapamycin and beta-integrin signaling pathways</article-title>. <source>J Neurovirol</source>. (<year>2019</year>) <volume>25</volume>:<page-range>384&#x2013;96</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s13365-019-00729-y</pub-id>
</citation>
</ref>
<ref id="B64">
<label>64</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mahmud</surname> <given-names>FJ</given-names>
</name>
<name>
<surname>Boucher</surname> <given-names>T</given-names>
</name>
<name>
<surname>Liang</surname> <given-names>S</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>AM</given-names>
</name>
</person-group>. <article-title>Osteopontin and integrin mediated modulation of post-synapses in HIV envelope glycoprotein exposed hippocampal neurons</article-title>. <source>Brain Sci</source>. (<year>2020</year>) <volume>10</volume>:<page-range>346</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.3390/brainsci10060346</pub-id>
</citation>
</ref>
<ref id="B65">
<label>65</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Das</surname> <given-names>K</given-names>
</name>
<name>
<surname>Martinez</surname> <given-names>SE</given-names>
</name>
<name>
<surname>DeStefano</surname> <given-names>JJ</given-names>
</name>
<name>
<surname>Arnold</surname> <given-names>E</given-names>
</name>
</person-group>. <article-title>Structure of HIV-1 RT/dsRNA initiation complex prior to nucleotide incorporation</article-title>. <source>Proc Natl Acad Sci U S A</source>. (<year>2019</year>) <volume>116</volume>:<page-range>7308&#x2013;13</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1073/pnas.1814170116</pub-id>
</citation>
</ref>
<ref id="B66">
<label>66</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chivero</surname> <given-names>ET</given-names>
</name>
<name>
<surname>Guo</surname> <given-names>ML</given-names>
</name>
<name>
<surname>Periyasamy</surname> <given-names>P</given-names>
</name>
<name>
<surname>Liao</surname> <given-names>K</given-names>
</name>
<name>
<surname>Callen</surname> <given-names>SE</given-names>
</name>
<name>
<surname>Buch</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>HIV-1 tat primes and activates microglial NLRP3 inflammasome-mediated neuroinflammation</article-title>. <source>J Neurosci</source>. (<year>2017</year>) <volume>37</volume>:<page-range>3599&#x2013;609</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1523/JNEUROSCI.3045-16.2017</pub-id>
</citation>
</ref>
<ref id="B67">
<label>67</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dostert</surname> <given-names>C</given-names>
</name>
<name>
<surname>Petrilli</surname> <given-names>V</given-names>
</name>
<name>
<surname>Van Bruggen</surname> <given-names>R</given-names>
</name>
<name>
<surname>Steele</surname> <given-names>C</given-names>
</name>
<name>
<surname>Mossman</surname> <given-names>BT</given-names>
</name>
<name>
<surname>Tschopp</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Innate immune activation through Nalp3 inflammasome sensing of asbestos and silica</article-title>. <source>Science</source>. (<year>2008</year>) <volume>320</volume>:<page-range>674&#x2013;7</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1126/science.1156995</pub-id>
</citation>
</ref>
<ref id="B68">
<label>68</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>He</surname> <given-names>X</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>W</given-names>
</name>
<name>
<surname>Zeng</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Wei</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Gao</surname> <given-names>J</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>B</given-names>
</name>
<etal/>
</person-group>. <article-title>NLRP3-dependent pyroptosis is required for HIV-1 gp120-induced neuropathology</article-title>. <source>Cell Mol Immunol</source>. (<year>2020</year>) <volume>17</volume>:<page-range>283&#x2013;99</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41423-019-0260-y</pub-id>
</citation>
</ref>
<ref id="B69">
<label>69</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mamik</surname> <given-names>MK</given-names>
</name>
<name>
<surname>Hui</surname> <given-names>E</given-names>
</name>
<name>
<surname>Branton</surname> <given-names>WG</given-names>
</name>
<name>
<surname>McKenzie</surname> <given-names>BA</given-names>
</name>
<name>
<surname>Chisholm</surname> <given-names>J</given-names>
</name>
<name>
<surname>Cohen</surname> <given-names>EA</given-names>
</name>
<etal/>
</person-group>. <article-title>HIV-1 viral protein R activates NLRP3 inflammasome in microglia: implications for HIV-1 associated neuroinflammation</article-title>. <source>J Neuroimmune Pharmacol</source>. (<year>2017</year>) <volume>12</volume>:<page-range>233&#x2013;48</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s11481-016-9708-3</pub-id>
</citation>
</ref>
<ref id="B70">
<label>70</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Adamczak</surname> <given-names>SE</given-names>
</name>
<name>
<surname>de Rivero Vaccari</surname> <given-names>JP</given-names>
</name>
<name>
<surname>Dale</surname> <given-names>G</given-names>
</name>
<name>
<surname>Brand</surname> <given-names>FJ</given-names>
</name>
<name>
<surname>Nonner</surname> <given-names>D</given-names> <suffix>3rd</suffix>
</name>
<name>
<surname>Bullock</surname> <given-names>MR</given-names>
</name>
<etal/>
</person-group>. <article-title>Pyroptotic neuronal cell death mediated by the AIM2 inflammasome</article-title>. <source>J Cereb Blood Flow Metab</source>. (<year>2014</year>) <volume>34</volume>:<page-range>621&#x2013;9</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/jcbfm.2013.236</pub-id>
</citation>
</ref>
<ref id="B71">
<label>71</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kaushal</surname> <given-names>S</given-names>
</name>
<name>
<surname>Tamer</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Opoku</surname> <given-names>F</given-names>
</name>
<name>
<surname>Forcelli</surname> <given-names>PA</given-names>
</name>
</person-group>. <article-title>Anticonvulsant drug-induced cell death in the developing white matter of the rodent brain</article-title>. <source>Epilepsia</source>. (<year>2016</year>) <volume>57</volume>:<page-range>727&#x2013;34</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/epi.13365</pub-id>
</citation>
</ref>
<ref id="B72">
<label>72</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tan</surname> <given-names>MS</given-names>
</name>
<name>
<surname>Tan</surname> <given-names>L</given-names>
</name>
<name>
<surname>Jiang</surname> <given-names>T</given-names>
</name>
<name>
<surname>Zhu</surname> <given-names>XC</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>HF</given-names>
</name>
<name>
<surname>Jia</surname> <given-names>CD</given-names>
</name>
<etal/>
</person-group>. <article-title>Amyloid-beta induces NLRP1-dependent neuronal pyroptosis in models of Alzheimer's disease</article-title>. <source>Cell Death Dis</source>. (<year>2014</year>) <volume>5</volume>:<elocation-id>e1382</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/cddis.2014.348</pub-id>
</citation>
</ref>
<ref id="B73">
<label>73</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bergsbaken</surname> <given-names>T</given-names>
</name>
<name>
<surname>Fink</surname> <given-names>SL</given-names>
</name>
<name>
<surname>Cookson</surname> <given-names>BT</given-names>
</name>
</person-group>. <article-title>Pyroptosis: host cell death and inflammation</article-title>. <source>Nat Rev Microbiol</source>. (<year>2009</year>) <volume>7</volume>:<fpage>99</fpage>&#x2013;<lpage>109</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/nrmicro2070</pub-id>
</citation>
</ref>
<ref id="B74">
<label>74</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Boise</surname> <given-names>LH</given-names>
</name>
<name>
<surname>Collins</surname> <given-names>CM</given-names>
</name>
</person-group>. <article-title>Salmonella-induced cell death: apoptosis, necrosis or programmed cell death</article-title>? <source>Trends Microbiol</source>. (<year>2001</year>) <volume>9</volume>:<page-range>64&#x2013;7</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/S0966-842X(00)01937-5</pub-id>
</citation>
</ref>
<ref id="B75">
<label>75</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fink</surname> <given-names>SL</given-names>
</name>
<name>
<surname>Cookson</surname> <given-names>BT</given-names>
</name>
</person-group>. <article-title>Caspase-1-dependent pore formation during pyroptosis leads to osmotic lysis of infected host macrophages</article-title>. <source>Cell Microbiol</source>. (<year>2006</year>) <volume>8</volume>:<page-range>1812&#x2013;25</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/j.1462-5822.2006.00751.x</pub-id>
</citation>
</ref>
<ref id="B76">
<label>76</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fink</surname> <given-names>SL</given-names>
</name>
<name>
<surname>Cookson</surname> <given-names>BT</given-names>
</name>
</person-group>. <article-title>Pyroptosis and host cell death responses during Salmonella infection</article-title>. <source>Cell Microbiol</source>. (<year>2007</year>) <volume>9</volume>:<page-range>2562&#x2013;70</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/j.1462-5822.2007.01036.x</pub-id>
</citation>
</ref>
<ref id="B77">
<label>77</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Oladapo</surname> <given-names>A</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>T</given-names>
</name>
<name>
<surname>Menolascino</surname> <given-names>J</given-names>
</name>
<name>
<surname>Periyasamy</surname> <given-names>P</given-names>
</name>
</person-group>. <article-title>Role of pyroptosis in the pathogenesis of various neurological diseases</article-title>. <source>Brain Behav Immun</source>. (<year>2024</year>) <volume>117</volume>:<page-range>428&#x2013;46</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.bbi.2024.02.001</pub-id>
</citation>
</ref>
<ref id="B78">
<label>78</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Walsh</surname> <given-names>JG</given-names>
</name>
<name>
<surname>Reinke</surname> <given-names>SN</given-names>
</name>
<name>
<surname>Mamik</surname> <given-names>MK</given-names>
</name>
<name>
<surname>McKenzie</surname> <given-names>BA</given-names>
</name>
<name>
<surname>Maingat</surname> <given-names>F</given-names>
</name>
<name>
<surname>Branton</surname> <given-names>WG</given-names>
</name>
<etal/>
</person-group>. <article-title>Rapid inflammasome activation in microglia contributes to brain disease in HIV/AIDS</article-title>. <source>Retrovirology</source>. (<year>2014</year>) <volume>11</volume>:<fpage>35</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/1742-4690-11-35</pub-id>
</citation>
</ref>
<ref id="B79">
<label>79</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Guerville</surname> <given-names>F</given-names>
</name>
<name>
<surname>Vialemaringe</surname> <given-names>M</given-names>
</name>
<name>
<surname>Cognet</surname> <given-names>C</given-names>
</name>
<name>
<surname>Duffau</surname> <given-names>P</given-names>
</name>
<name>
<surname>Lazaro</surname> <given-names>E</given-names>
</name>
<name>
<surname>Cazanave</surname> <given-names>C</given-names>
</name>
<etal/>
</person-group>. <article-title>Mechanisms of systemic low-grade inflammation in HIV patients on long-term suppressive antiretroviral therapy: the inflammasome hypothesis</article-title>. <source>AIDS</source>. (<year>2023</year>) <volume>37</volume>:<page-range>1035&#x2013;46</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1097/QAD.0000000000003546</pub-id>
</citation>
</ref>
<ref id="B80">
<label>80</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Feria</surname> <given-names>MG</given-names>
</name>
<name>
<surname>Taborda</surname> <given-names>NA</given-names>
</name>
<name>
<surname>Hernandez</surname> <given-names>JC</given-names>
</name>
<name>
<surname>Rugeles</surname> <given-names>MT</given-names>
</name>
</person-group>. <article-title>HIV replication is associated to inflammasomes activation, IL-1beta, IL-18 and caspase-1 expression in GALT and peripheral blood</article-title>. <source>PLoS One</source>. (<year>2018</year>) <volume>13</volume>:<elocation-id>e0192845</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1371/journal.pone.0192845</pub-id>
</citation>
</ref>
<ref id="B81">
<label>81</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Heredia</surname> <given-names>A</given-names>
</name>
<name>
<surname>Le</surname> <given-names>N</given-names>
</name>
<name>
<surname>Gartenhaus</surname> <given-names>RB</given-names>
</name>
<name>
<surname>Sausville</surname> <given-names>E</given-names>
</name>
<name>
<surname>Medina-Moreno</surname> <given-names>S</given-names>
</name>
<name>
<surname>Zapata</surname> <given-names>JC</given-names>
</name>
<etal/>
</person-group>. <article-title>Targeting of mTOR catalytic site inhibits multiple steps of the HIV-1 lifecycle and suppresses HIV-1 viremia in humanized mice</article-title>. <source>Proc Natl Acad Sci U S A</source>. (<year>2015</year>) <volume>112</volume>:<page-range>9412&#x2013;7</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1073/pnas.1511144112</pub-id>
</citation>
</ref>
<ref id="B82">
<label>82</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kuss-Duerkop</surname> <given-names>SK</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>J</given-names>
</name>
<name>
<surname>Mena</surname> <given-names>I</given-names>
</name>
<name>
<surname>White</surname> <given-names>K</given-names>
</name>
<name>
<surname>Metreveli</surname> <given-names>G</given-names>
</name>
<name>
<surname>Sakthivel</surname> <given-names>R</given-names>
</name>
<etal/>
</person-group>. <article-title>Influenza virus differentially activates mTORC1 and mTORC2 signaling to maximize late stage replication</article-title>. <source>PLoS Pathog</source>. (<year>2017</year>) <volume>13</volume>:<elocation-id>e1006635</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1371/journal.ppat.1006635</pub-id>
</citation>
</ref>
<ref id="B83">
<label>83</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thoma</surname> <given-names>C</given-names>
</name>
</person-group>. <article-title>Infectious disease: Blocking mTOR inhibits HIV-1</article-title>. <source>Nat Rev Urol</source>. (<year>2015</year>) <volume>12</volume>:<fpage>417</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/nrurol.2015.185</pub-id>
</citation>
</ref>
<ref id="B84">
<label>84</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Besnard</surname> <given-names>E</given-names>
</name>
<name>
<surname>Hakre</surname> <given-names>S</given-names>
</name>
<name>
<surname>Kampmann</surname> <given-names>M</given-names>
</name>
<name>
<surname>Lim</surname> <given-names>HW</given-names>
</name>
<name>
<surname>Hosmane</surname> <given-names>NN</given-names>
</name>
<name>
<surname>Martin</surname> <given-names>A</given-names>
</name>
<etal/>
</person-group>. <article-title>The mTOR complex controls HIV latency</article-title>. <source>Cell Host Microbe</source>. (<year>2016</year>) <volume>20</volume>:<page-range>785&#x2013;97</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.chom.2016.11.001</pub-id>
</citation>
</ref>
<ref id="B85">
<label>85</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cinti</surname> <given-names>A</given-names>
</name>
<name>
<surname>Le Sage</surname> <given-names>V</given-names>
</name>
<name>
<surname>Milev</surname> <given-names>MP</given-names>
</name>
<name>
<surname>Valiente-Echeverria</surname> <given-names>F</given-names>
</name>
<name>
<surname>Crossie</surname> <given-names>C</given-names>
</name>
<name>
<surname>Miron</surname> <given-names>MJ</given-names>
</name>
<etal/>
</person-group>. <article-title>HIV-1 enhances mTORC1 activity and repositions lysosomes to the periphery by co-opting Rag GTPases</article-title>. <source>Sci Rep</source>. (<year>2017</year>) <volume>7</volume>:<fpage>5515</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41598-017-05410-0</pub-id>
</citation>
</ref>
<ref id="B86">
<label>86</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Campbell</surname> <given-names>GR</given-names>
</name>
<name>
<surname>Bruckman</surname> <given-names>RS</given-names>
</name>
<name>
<surname>Herns</surname> <given-names>SD</given-names>
</name>
<name>
<surname>Joshi</surname> <given-names>S</given-names>
</name>
<name>
<surname>Durden</surname> <given-names>DL</given-names>
</name>
<name>
<surname>Spector</surname> <given-names>SA</given-names>
</name>
</person-group>. <article-title>Induction of autophagy by PI3K/MTOR and PI3K/MTOR/BRD4 inhibitors suppresses HIV-1 replication</article-title>. <source>J Biol Chem</source>. (<year>2018</year>) <volume>293</volume>:<page-range>5808&#x2013;20</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1074/jbc.RA118.002353</pub-id>
</citation>
</ref>
<ref id="B87">
<label>87</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Planas</surname> <given-names>D</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Monteiro</surname> <given-names>P</given-names>
</name>
<name>
<surname>Goulet</surname> <given-names>JP</given-names>
</name>
<name>
<surname>Gosselin</surname> <given-names>A</given-names>
</name>
<name>
<surname>Grandvaux</surname> <given-names>N</given-names>
</name>
<etal/>
</person-group>. <article-title>HIV-1 selectively targets gut-homing CCR6+CD4+ T cells via mTOR-dependent mechanisms</article-title>. <source>JCI Insight</source>. (<year>2017</year>) <volume>2</volume>:<elocation-id>e93230</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1172/jci.insight.93230</pub-id>
</citation>
</ref>
<ref id="B88">
<label>88</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dai</surname> <given-names>W</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>F</given-names>
</name>
<name>
<surname>McMyn</surname> <given-names>N</given-names>
</name>
<name>
<surname>Song</surname> <given-names>B</given-names>
</name>
<name>
<surname>Walker-Sperling</surname> <given-names>VE</given-names>
</name>
<name>
<surname>Varriale</surname> <given-names>J</given-names>
</name>
<etal/>
</person-group>. <article-title>Genome-wide CRISPR screens identify combinations of candidate latency reversing agents for targeting the latent HIV-1 reservoir</article-title>. <source>Sci Transl Med</source>. (<year>2022</year>) <volume>14</volume>:<elocation-id>eabh3351</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1126/scitranslmed.abh3351</pub-id>
</citation>
</ref>
<ref id="B89">
<label>89</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saxton</surname> <given-names>RA</given-names>
</name>
<name>
<surname>Sabatini</surname> <given-names>DM</given-names>
</name>
</person-group>. <article-title>mTOR signaling in growth, metabolism, and disease</article-title>. <source>Cell</source>. (<year>2017</year>) <volume>168</volume>:<page-range>960&#x2013;76</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cell.2017.02.004</pub-id>
</citation>
</ref>
<ref id="B90">
<label>90</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Switon</surname> <given-names>K</given-names>
</name>
<name>
<surname>Kotulska</surname> <given-names>K</given-names>
</name>
<name>
<surname>Janusz-Kaminska</surname> <given-names>A</given-names>
</name>
<name>
<surname>Zmorzynska</surname> <given-names>J</given-names>
</name>
<name>
<surname>Jaworski</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Molecular neurobiology of mTOR</article-title>. <source>Neuroscience</source>. (<year>2017</year>) <volume>341</volume>:<page-range>112&#x2013;53</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.neuroscience.2016.11.017</pub-id>
</citation>
</ref>
<ref id="B91">
<label>91</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mehla</surname> <given-names>R</given-names>
</name>
<name>
<surname>Chauhan</surname> <given-names>A</given-names>
</name>
</person-group>. <article-title>HIV-1 differentially modulates autophagy in neurons and astrocytes</article-title>. <source>J Neuroimmunol</source>. (<year>2015</year>) <volume>285</volume>:<page-range>106&#x2013;18</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jneuroim.2015.06.001</pub-id>
</citation>
</ref>
<ref id="B92">
<label>92</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fields</surname> <given-names>J</given-names>
</name>
<name>
<surname>Dumaop</surname> <given-names>W</given-names>
</name>
<name>
<surname>Rockenstein</surname> <given-names>E</given-names>
</name>
<name>
<surname>Mante</surname> <given-names>M</given-names>
</name>
<name>
<surname>Spencer</surname> <given-names>B</given-names>
</name>
<name>
<surname>Grant</surname> <given-names>I</given-names>
</name>
<etal/>
</person-group>. <article-title>Age-dependent molecular alterations in the autophagy pathway in HIVE patients and in a gp120 tg mouse model: reversal with beclin-1 gene transfer</article-title>. <source>J Neurovirol</source>. (<year>2013</year>) <volume>19</volume>:<fpage>89</fpage>&#x2013;<lpage>101</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s13365-012-0145-7</pub-id>
</citation>
</ref>
<ref id="B93">
<label>93</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Huang</surname> <given-names>XH</given-names>
</name>
<name>
<surname>Ma</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>MM</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>N</given-names>
</name>
<name>
<surname>Hu</surname> <given-names>MN</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>LY</given-names>
</name>
<etal/>
</person-group>. <article-title>NLRP3 and mTOR Reciprocally Regulate Macrophage Phagolysosome Formation and Acidification Against Vibrio vulnificus Infection</article-title>. <source>Front Cell Dev Biol</source>. (<year>2020</year>) <volume>8</volume>:<elocation-id>587961</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fcell.2020.587961</pub-id>
</citation>
</ref>
<ref id="B94">
<label>94</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ko</surname> <given-names>JH</given-names>
</name>
<name>
<surname>Yoon</surname> <given-names>SO</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>HJ</given-names>
</name>
<name>
<surname>Oh</surname> <given-names>JY</given-names>
</name>
</person-group>. <article-title>Rapamycin regulates macrophage activation by inhibiting NLRP3 inflammasome-p38 MAPK-NFkappaB pathways in autophagy- and p62-dependent manners</article-title>. <source>Oncotarget</source>. (<year>2017</year>) <volume>8</volume>:<page-range>40817&#x2013;31</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.18632/oncotarget.v8i25</pub-id>
</citation>
</ref>
<ref id="B95">
<label>95</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname> <given-names>X</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>X</given-names>
</name>
<name>
<surname>Pan</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Shi</surname> <given-names>G</given-names>
</name>
<name>
<surname>Ren</surname> <given-names>J</given-names>
</name>
<name>
<surname>Fan</surname> <given-names>H</given-names>
</name>
<etal/>
</person-group>. <article-title>mTOR regulates NLRP3 inflammasome activation via reactive oxygen species in murine lupus</article-title>. <source>Acta Biochim Biophys Sin (Shanghai)</source>. (<year>2018</year>) <volume>50</volume>:<page-range>888&#x2013;96</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/abbs/gmy088</pub-id>
</citation>
</ref>
<ref id="B96">
<label>96</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yang</surname> <given-names>F</given-names>
</name>
<name>
<surname>Ye</surname> <given-names>X</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>M</given-names>
</name>
<name>
<surname>Li</surname> <given-names>H</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Zhong</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Inhibition of NLRP3 inflammsome activation and pyroptosis in macrophages by Taraxasterol is associated with its regulation on mTOR signaling</article-title>. <source>Front Immunol</source>. (<year>2021</year>) <volume>12</volume>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2021.632606</pub-id>
</citation>
</ref>
<ref id="B97">
<label>97</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Buckley</surname> <given-names>S</given-names>
</name>
<name>
<surname>Byrnes</surname> <given-names>S</given-names>
</name>
<name>
<surname>Cochrane</surname> <given-names>C</given-names>
</name>
<name>
<surname>Roche</surname> <given-names>M</given-names>
</name>
<name>
<surname>Estes</surname> <given-names>JD</given-names>
</name>
<name>
<surname>Selemidis</surname> <given-names>S</given-names>
</name>
<etal/>
</person-group>. <article-title>The role of oxidative stress in HIV-associated neurocognitive disorders</article-title>. <source>Brain Behav Immun Health</source>. (<year>2021</year>) <volume>13</volume>:<fpage>100235</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.bbih.2021.100235</pub-id>
</citation>
</ref>
<ref id="B98">
<label>98</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Harijith</surname> <given-names>A</given-names>
</name>
<name>
<surname>Ebenezer</surname> <given-names>DL</given-names>
</name>
<name>
<surname>Natarajan</surname> <given-names>V</given-names>
</name>
</person-group>. <article-title>Reactive oxygen species at the crossroads of inflammasome and inflammation</article-title>. <source>Front Physiol</source>. (<year>2014</year>) <volume>5</volume>:<elocation-id>352</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fphys.2014.00352</pub-id>
</citation>
</ref>
<ref id="B99">
<label>99</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Marin-Aguilar</surname> <given-names>F</given-names>
</name>
<name>
<surname>Castejon-Vega</surname> <given-names>B</given-names>
</name>
<name>
<surname>Alcocer-Gomez</surname> <given-names>E</given-names>
</name>
<name>
<surname>Lendines-Cordero</surname> <given-names>D</given-names>
</name>
<name>
<surname>Cooper</surname> <given-names>MA</given-names>
</name>
<name>
<surname>de la Cruz</surname> <given-names>P</given-names>
</name>
<etal/>
</person-group>. <article-title>NLRP3 inflammasome inhibition by MCC950 in aged mice improves health via enhanced autophagy and PPARalpha activity</article-title>. <source>J Gerontol A Biol Sci Med Sci</source>. (<year>2020</year>) <volume>75</volume>:<page-range>1457&#x2013;64</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/gerona/glz239</pub-id>
</citation>
</ref>
<ref id="B100">
<label>100</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bhaskaran</surname> <given-names>N</given-names>
</name>
<name>
<surname>Faddoul</surname> <given-names>F</given-names>
</name>
<name>
<surname>Paes da Silva</surname> <given-names>A</given-names>
</name>
<name>
<surname>Jayaraman</surname> <given-names>S</given-names>
</name>
<name>
<surname>Schneider</surname> <given-names>E</given-names>
</name>
<name>
<surname>Mamileti</surname> <given-names>P</given-names>
</name>
<etal/>
</person-group>. <article-title>IL-1beta-myD88-mTOR axis promotes immune-protective IL-17A(+)Foxp3(+) cells during mucosal infection and is dysregulated with aging</article-title>. <source>Front Immunol</source>. (<year>2020</year>) <volume>11</volume>:<elocation-id>595936</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2020.595936</pub-id>
</citation>
</ref>
<ref id="B101">
<label>101</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cai</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Xue</surname> <given-names>F</given-names>
</name>
<name>
<surname>Qin</surname> <given-names>H</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>X</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>N</given-names>
</name>
<name>
<surname>Fleming</surname> <given-names>C</given-names>
</name>
<etal/>
</person-group>. <article-title>Differential Roles of the mTOR-STAT3 Signaling in Dermal gammadelta T Cell Effector Function in Skin Inflammation</article-title>. <source>Cell Rep</source>. (<year>2019</year>) <volume>27</volume>:<fpage>3034</fpage>&#x2013;<lpage>3048.e5</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.celrep.2019.05.019</pub-id>
</citation>
</ref>
<ref id="B102">
<label>102</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xiao</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Peng</surname> <given-names>J</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Arafat</surname> <given-names>A</given-names>
</name>
<name>
<surname>Yin</surname> <given-names>F</given-names>
</name>
</person-group>. <article-title>The effect of IL-1beta on synaptophysin expression and electrophysiology of hippocampal neurons through the PI3K/Akt/mTOR signaling pathway in a rat model of mesial temporal lobe epilepsy</article-title>. <source>Neurol Res</source>. (<year>2017</year>) <volume>39</volume>:<page-range>640&#x2013;8</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1080/01616412.2017.1312070</pub-id>
</citation>
</ref>
<ref id="B103">
<label>103</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Paolicelli</surname> <given-names>RC</given-names>
</name>
<name>
<surname>Sierra</surname> <given-names>A</given-names>
</name>
<name>
<surname>Stevens</surname> <given-names>B</given-names>
</name>
<name>
<surname>Tremblay</surname> <given-names>ME</given-names>
</name>
<name>
<surname>Aguzzi</surname> <given-names>A</given-names>
</name>
<name>
<surname>Ajami</surname> <given-names>B</given-names>
</name>
<etal/>
</person-group>. <article-title>Microglia states and nomenclature: A field at its crossroads</article-title>. <source>Neuron</source>. (<year>2022</year>) <volume>110</volume>(<issue>21</issue>):<page-range>3458&#x2013;83</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.neuron.2022.10.020</pub-id>
</citation>
</ref>
<ref id="B104">
<label>104</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shimizu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Ota</surname> <given-names>K</given-names>
</name>
<name>
<surname>Ikeguchi</surname> <given-names>R</given-names>
</name>
<name>
<surname>Kubo</surname> <given-names>S</given-names>
</name>
<name>
<surname>Kabasawa</surname> <given-names>C</given-names>
</name>
<name>
<surname>Uchiyama</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>Plasma osteopontin levels are associated with disease activity in the patients with multiple sclerosis and neuromyelitis optica</article-title>. <source>J Neuroimmunol</source>. (<year>2013</year>) <volume>263</volume>:<page-range>148&#x2013;51</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jneuroim.2013.07.005</pub-id>
</citation>
</ref>
<ref id="B105">
<label>105</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yim</surname> <given-names>A</given-names>
</name>
<name>
<surname>Smith</surname> <given-names>C</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>AM</given-names>
</name>
</person-group>. <article-title>Osteopontin/secreted phosphoprotein-1 harnesses glial-, immune-, and neuronal cell ligand-receptor interactions to sense and regulate acute and chronic neuroinflammation</article-title>. <source>Immunol Rev</source>. (<year>2022</year>) <volume>311</volume>:<page-range>224&#x2013;33</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/imr.13081</pub-id>
</citation>
</ref>
<ref id="B106">
<label>106</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Comi</surname> <given-names>C</given-names>
</name>
<name>
<surname>Carecchio</surname> <given-names>M</given-names>
</name>
<name>
<surname>Chiocchetti</surname> <given-names>A</given-names>
</name>
<name>
<surname>Nicola</surname> <given-names>S</given-names>
</name>
<name>
<surname>Galimberti</surname> <given-names>D</given-names>
</name>
<name>
<surname>Fenoglio</surname> <given-names>C</given-names>
</name>
<etal/>
</person-group>. <article-title>Osteopontin is increased in the cerebrospinal fluid of patients with Alzheimer's disease and its levels correlate with cognitive decline</article-title>. <source>J Alzheimers Dis</source>. (<year>2010</year>) <volume>19</volume>:<page-range>1143&#x2013;8</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.3233/JAD-2010-1309</pub-id>
</citation>
</ref>
<ref id="B107">
<label>107</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Comabella</surname> <given-names>M</given-names>
</name>
<name>
<surname>Pericot</surname> <given-names>I</given-names>
</name>
<name>
<surname>Goertsches</surname> <given-names>R</given-names>
</name>
<name>
<surname>Nos</surname> <given-names>C</given-names>
</name>
<name>
<surname>Castillo</surname> <given-names>M</given-names>
</name>
<name>
<surname>Blas Navarro</surname> <given-names>J</given-names>
</name>
<etal/>
</person-group>. <article-title>Plasma osteopontin levels in multiple sclerosis</article-title>. <source>J Neuroimmunol</source>. (<year>2005</year>) <volume>158</volume>:<page-range>231&#x2013;9</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jneuroim.2004.09.004</pub-id>
</citation>
</ref>
<ref id="B108">
<label>108</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Vogt</surname> <given-names>MH</given-names>
</name>
<name>
<surname>Floris</surname> <given-names>S</given-names>
</name>
<name>
<surname>Killestein</surname> <given-names>J</given-names>
</name>
<name>
<surname>Knol</surname> <given-names>DL</given-names>
</name>
<name>
<surname>Smits</surname> <given-names>M</given-names>
</name>
<name>
<surname>Barkhof</surname> <given-names>F</given-names>
</name>
<etal/>
</person-group>. <article-title>Osteopontin levels and increased disease activity in relapsing remitting multiple sclerosis patients</article-title>. <source>J Neuroimmunol</source>. (<year>2004</year>) <volume>155</volume>:<page-range>155&#x2013;60</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jneuroim.2004.06.007</pub-id>
</citation>
</ref>
<ref id="B109">
<label>109</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Brown</surname> <given-names>A</given-names>
</name>
<name>
<surname>Islam</surname> <given-names>T</given-names>
</name>
<name>
<surname>Adams</surname> <given-names>R</given-names>
</name>
<name>
<surname>Nerle</surname> <given-names>S</given-names>
</name>
<name>
<surname>Kamara</surname> <given-names>M</given-names>
</name>
<name>
<surname>Eger</surname> <given-names>C</given-names>
</name>
<etal/>
</person-group>. <article-title>Osteopontin enhances HIV replication and is increased in the brain and cerebrospinal fluid of HIV-infected individuals</article-title>. <source>J Neurovirol</source>. (<year>2011</year>) <volume>17</volume>:<page-range>382&#x2013;92</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s13365-011-0035-4</pub-id>
</citation>
</ref>
<ref id="B110">
<label>110</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Burdo</surname> <given-names>TH</given-names>
</name>
<name>
<surname>Ellis</surname> <given-names>RJ</given-names>
</name>
<name>
<surname>Fox</surname> <given-names>HS</given-names>
</name>
</person-group>. <article-title>Osteopontin is increased in HIV-associated dementia</article-title>. <source>J Infect Dis</source>. (<year>2008</year>) <volume>198</volume>:<page-range>715&#x2013;22</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1086/590504</pub-id>
</citation>
</ref>
<ref id="B111">
<label>111</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mahmud</surname> <given-names>FJ</given-names>
</name>
<name>
<surname>Du</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Greif</surname> <given-names>E</given-names>
</name>
<name>
<surname>Boucher</surname> <given-names>T</given-names>
</name>
<name>
<surname>Dannals</surname> <given-names>RF</given-names>
</name>
<name>
<surname>Mathews</surname> <given-names>WB</given-names>
</name>
<etal/>
</person-group>. <article-title>Osteopontin/secreted phosphoprotein-1 behaves as a molecular brake regulating the neuroinflammatory response to chronic viral infection</article-title>. <source>J Neuroinflamm</source>. (<year>2020</year>) <volume>17</volume>:<fpage>273</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12974-020-01949-4</pub-id>
</citation>
</ref>
<ref id="B112">
<label>112</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kaul</surname> <given-names>M</given-names>
</name>
<name>
<surname>Garden</surname> <given-names>GA</given-names>
</name>
<name>
<surname>Lipton</surname> <given-names>SA</given-names>
</name>
</person-group>. <article-title>Pathways to neuronal injury and apoptosis in HIV-associated dementia</article-title>. <source>Nature</source>. (<year>2001</year>) <volume>410</volume>:<page-range>988&#x2013;94</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/35073667</pub-id>
</citation>
</ref>
<ref id="B113">
<label>113</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Deczkowska</surname> <given-names>A</given-names>
</name>
<name>
<surname>Keren-Shaul</surname> <given-names>H</given-names>
</name>
<name>
<surname>Weiner</surname> <given-names>A</given-names>
</name>
<name>
<surname>Colonna</surname> <given-names>M</given-names>
</name>
<name>
<surname>Schwartz</surname> <given-names>M</given-names>
</name>
<name>
<surname>Amit</surname> <given-names>I</given-names>
</name>
</person-group>. <article-title>Disease-associated microglia: A universal immune sensor of neurodegeneration</article-title>. <source>Cell</source>. (<year>2018</year>) <volume>173</volume>:<page-range>1073&#x2013;81</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cell.2018.05.003</pub-id>
</citation>
</ref>
<ref id="B114">
<label>114</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Keren-Shaul</surname> <given-names>H</given-names>
</name>
<name>
<surname>Spinrad</surname> <given-names>A</given-names>
</name>
<name>
<surname>Weiner</surname> <given-names>A</given-names>
</name>
<name>
<surname>Matcovitch-Natan</surname> <given-names>O</given-names>
</name>
<name>
<surname>Dvir-Szternfeld</surname> <given-names>R</given-names>
</name>
<name>
<surname>Ulland</surname> <given-names>TK</given-names>
</name>
<etal/>
</person-group>. <article-title>A unique microglia type associated with restricting development of Alzheimer's disease</article-title>. <source>Cell</source>. (<year>2017</year>) <volume>169</volume>:<fpage>1276</fpage>&#x2013;<lpage>90.e17</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cell.2017.05.018</pub-id>
</citation>
</ref>
<ref id="B115">
<label>115</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Masuda</surname> <given-names>T</given-names>
</name>
<name>
<surname>Sankowski</surname> <given-names>R</given-names>
</name>
<name>
<surname>Staszewski</surname> <given-names>O</given-names>
</name>
<name>
<surname>Prinz</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Microglia heterogeneity in the single-cell era</article-title>. <source>Cell Rep</source>. (<year>2020</year>) <volume>30</volume>:<page-range>1271&#x2013;81</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.celrep.2020.01.010</pub-id>
</citation>
</ref>
<ref id="B116">
<label>116</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Qiu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Shen</surname> <given-names>X</given-names>
</name>
<name>
<surname>Ravid</surname> <given-names>O</given-names>
</name>
<name>
<surname>Atrakchi</surname> <given-names>D</given-names>
</name>
<name>
<surname>Rand</surname> <given-names>D</given-names>
</name>
<name>
<surname>Wight</surname> <given-names>AE</given-names>
</name>
<etal/>
</person-group>. <article-title>Definition of the contribution of an Osteopontin-producing CD11c(+) microglial subset to Alzheimer's disease</article-title>. <source>Proc Natl Acad Sci U S A</source>. (<year>2023</year>) <volume>120</volume>:<fpage>e2218915120</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1073/pnas.2218915120</pub-id>
</citation>
</ref>
<ref id="B117">
<label>117</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rentsendorj</surname> <given-names>A</given-names>
</name>
<name>
<surname>Sheyn</surname> <given-names>J</given-names>
</name>
<name>
<surname>Fuchs</surname> <given-names>DT</given-names>
</name>
<name>
<surname>Daley</surname> <given-names>D</given-names>
</name>
<name>
<surname>Salumbides</surname> <given-names>BC</given-names>
</name>
<name>
<surname>Schubloom</surname> <given-names>HE</given-names>
</name>
<etal/>
</person-group>. <article-title>A novel role for osteopontin in macrophage-mediated amyloid-beta clearance in Alzheimer's models</article-title>. <source>Brain Behav Immun</source>. (<year>2018</year>) <volume>67</volume>:<page-range>163&#x2013;80</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.bbi.2017.08.019</pub-id>
</citation>
</ref>
<ref id="B118">
<label>118</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>De Schepper</surname> <given-names>S</given-names>
</name>
<name>
<surname>Ge</surname> <given-names>JZ</given-names>
</name>
<name>
<surname>Crowley</surname> <given-names>G</given-names>
</name>
<name>
<surname>Ferreira</surname> <given-names>LSS</given-names>
</name>
<name>
<surname>Garceau</surname> <given-names>D</given-names>
</name>
<name>
<surname>Toomey</surname> <given-names>CE</given-names>
</name>
<etal/>
</person-group>. <article-title>Perivascular cells induce microglial phagocytic states and synaptic engulfment via SPP1 in mouse models of Alzheimer's disease</article-title>. <source>Nat Neurosci</source>. (<year>2023</year>) <volume>26</volume>:<page-range>406&#x2013;15</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41593-023-01257-z</pub-id>
</citation>
</ref>
<ref id="B119">
<label>119</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lalwani</surname> <given-names>RC</given-names>
</name>
<name>
<surname>Volmar</surname> <given-names>C-H</given-names>
</name>
<name>
<surname>Wahlestedt</surname> <given-names>C</given-names>
</name>
<name>
<surname>Webster</surname> <given-names>KA</given-names>
</name>
<name>
<surname>Shehadeh</surname> <given-names>LA</given-names>
</name>
</person-group>. <article-title>Contextualizing the role of osteopontin in the inflammatory responses of Alzheimer&#x2019;s disease</article-title>. <source>Biomedicines</source>. (<year>2023</year>) <volume>11</volume>:<fpage>3232</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.3390/biomedicines11123232</pub-id>
</citation>
</ref>
<ref id="B120">
<label>120</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shi</surname> <given-names>L</given-names>
</name>
<name>
<surname>Sun</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Su</surname> <given-names>W</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>F</given-names>
</name>
<name>
<surname>Xie</surname> <given-names>D</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>Q</given-names>
</name>
<etal/>
</person-group>. <article-title>Treg cell-derived osteopontin promotes microglia-mediated white matter repair after ischemic stroke</article-title>. <source>Immunity</source>. (<year>2021</year>) <volume>54</volume>:<fpage>1527</fpage>&#x2013;<lpage>42.e8</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.immuni.2021.04.022</pub-id>
</citation>
</ref>
<ref id="B121">
<label>121</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Davaanyam</surname> <given-names>D</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>ID</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>JK</given-names>
</name>
</person-group>. <article-title>Intranasal delivery of RGD-containing osteopontin heptamer peptide confers neuroprotection in the ischemic brain and augments microglia M2 polarization</article-title>. <source>Int J Mol Sci</source>. (<year>2021</year>) <volume>22</volume>:<page-range>9999</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.3390/ijms22189999</pub-id>
</citation>
</ref>
<ref id="B122">
<label>122</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>X</given-names>
</name>
<name>
<surname>Shu</surname> <given-names>Q</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Gao</surname> <given-names>C</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Xing</surname> <given-names>Z</given-names>
</name>
<etal/>
</person-group>. <article-title>Recombinant osteopontin provides protection for cerebral infarction by inhibiting the NLRP3 inflammasome in microglia</article-title>. <source>Brain Res</source>. (<year>2021</year>) <volume>1751</volume>:<fpage>147170</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.brainres.2020.147170</pub-id>
</citation>
</ref>
<ref id="B123">
<label>123</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Inoue</surname> <given-names>M</given-names>
</name>
<name>
<surname>Williams</surname> <given-names>KL</given-names>
</name>
<name>
<surname>Oliver</surname> <given-names>T</given-names>
</name>
<name>
<surname>Vandenabeele</surname> <given-names>P</given-names>
</name>
<name>
<surname>Rajan</surname> <given-names>JV</given-names>
</name>
<name>
<surname>Miao</surname> <given-names>EA</given-names>
</name>
<etal/>
</person-group>. <article-title>Interferon-beta therapy against EAE is effective only when development of the disease depends on the NLRP3 inflammasome</article-title>. <source>Sci Signal</source>. (<year>2012</year>) <volume>5</volume>:<fpage>ra38</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1126/scisignal.2002767</pub-id>
</citation>
</ref>
<ref id="B124">
<label>124</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lopes</surname> <given-names>KP</given-names>
</name>
<name>
<surname>Yu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Shen</surname> <given-names>X</given-names>
</name>
<name>
<surname>Qiu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Tasaki</surname> <given-names>S</given-names>
</name>
<name>
<surname>Iatrou</surname> <given-names>A</given-names>
</name>
<etal/>
</person-group>. <article-title>Associations of cortical SPP1 and ITGAX with cognition and common neuropathologies in older adults</article-title>. <source>Alzheimers Dement</source>. (<year>2024</year>) <volume>20</volume>:<page-range>525&#x2013;37</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/alz.13474</pub-id>
</citation>
</ref>
<ref id="B125">
<label>125</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cowan</surname> <given-names>M</given-names>
</name>
<name>
<surname>Petri</surname> <given-names>WA</given-names>
<suffix>Jr</suffix>
</name>
</person-group>. <article-title>Microglia: immune regulators of neurodevelopment</article-title>. <source>Front Immunol</source>. (<year>2018</year>) <volume>9</volume>:<elocation-id>2576</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2018.02576</pub-id>
</citation>
</ref>
<ref id="B126">
<label>126</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lauro</surname> <given-names>C</given-names>
</name>
<name>
<surname>Limatola</surname> <given-names>C</given-names>
</name>
</person-group>. <article-title>Metabolic reprograming of microglia in the regulation of the innate inflammatory response</article-title>. <source>Front Immunol</source>. (<year>2020</year>) <volume>11</volume>:<elocation-id>493</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2020.00493</pub-id>
</citation>
</ref>
<ref id="B127">
<label>127</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wenzel</surname> <given-names>TJ</given-names>
</name>
<name>
<surname>Gates</surname> <given-names>EJ</given-names>
</name>
<name>
<surname>Ranger</surname> <given-names>AL</given-names>
</name>
<name>
<surname>Klegeris</surname> <given-names>A</given-names>
</name>
</person-group>. <article-title>Short-chain fatty acids (SCFAs) alone or in combination regulate select immune functions of microglia-like cells</article-title>. <source>Mol Cell Neurosci</source>. (<year>2020</year>) <volume>105</volume>:<fpage>103493</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.mcn.2020.103493</pub-id>
</citation>
</ref>
<ref id="B128">
<label>128</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ye</surname> <given-names>L</given-names>
</name>
<name>
<surname>Jiang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Crosstalk between glucose metabolism, lactate production and immune response modulation</article-title>. <source>Cytokine Growth Factor Rev</source>. (<year>2022</year>) <volume>68</volume>:<fpage>81</fpage>&#x2013;<lpage>92</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cytogfr.2022.11.001</pub-id>
</citation>
</ref>
<ref id="B129">
<label>129</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Buchkovich</surname> <given-names>NJ</given-names>
</name>
<name>
<surname>Yu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Zampieri</surname> <given-names>CA</given-names>
</name>
<name>
<surname>Alwine</surname> <given-names>JC</given-names>
</name>
</person-group>. <article-title>The TORrid affairs of viruses: effects of mammalian DNA viruses on the PI3K-Akt-mTOR signalling pathway</article-title>. <source>Nat Rev Microbiol</source>. (<year>2008</year>) <volume>6</volume>:<page-range>266&#x2013;75</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/nrmicro1855</pub-id>
</citation>
</ref>
<ref id="B130">
<label>130</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chiramel</surname> <given-names>AI</given-names>
</name>
<name>
<surname>Best</surname> <given-names>SM</given-names>
</name>
</person-group>. <article-title>Role of autophagy in Zika virus infection and pathogenesis</article-title>. <source>Virus Res</source>. (<year>2018</year>) <volume>254</volume>:<fpage>34</fpage>&#x2013;<lpage>40</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.virusres.2017.09.006</pub-id>
</citation>
</ref>
<ref id="B131">
<label>131</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Karam</surname> <given-names>BS</given-names>
</name>
<name>
<surname>Morris</surname> <given-names>RS</given-names>
</name>
<name>
<surname>Bramante</surname> <given-names>CT</given-names>
</name>
<name>
<surname>Puskarich</surname> <given-names>M</given-names>
</name>
<name>
<surname>Zolfaghari</surname> <given-names>EJ</given-names>
</name>
<name>
<surname>Lotfi-Emran</surname> <given-names>S</given-names>
</name>
<etal/>
</person-group>. <article-title>mTOR inhibition in COVID-19: A commentary and review of efficacy in RNA viruses</article-title>. <source>J Med Virol</source>. (<year>2021</year>) <volume>93</volume>:<page-range>1843&#x2013;6</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/jmv.26728</pub-id>
</citation>
</ref>
<ref id="B132">
<label>132</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Khalid</surname> <given-names>T</given-names>
</name>
<name>
<surname>Hasan</surname> <given-names>A</given-names>
</name>
<name>
<surname>Fatima</surname> <given-names>JE</given-names>
</name>
<name>
<surname>Faridi</surname> <given-names>SA</given-names>
</name>
<name>
<surname>Khan</surname> <given-names>AF</given-names>
</name>
<name>
<surname>Mir</surname> <given-names>SS</given-names>
</name>
</person-group>. <article-title>Therapeutic role of mTOR inhibitors in control of SARS-CoV-2 viral replication</article-title>. <source>Mol Biol Rep</source>. (<year>2023</year>) <volume>50</volume>:<page-range>2701&#x2013;11</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s11033-022-08188-1</pub-id>
</citation>
</ref>
<ref id="B133">
<label>133</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Vakrakou</surname> <given-names>AG</given-names>
</name>
<name>
<surname>Alexaki</surname> <given-names>A</given-names>
</name>
<name>
<surname>Brinia</surname> <given-names>ME</given-names>
</name>
<name>
<surname>Anagnostouli</surname> <given-names>M</given-names>
</name>
<name>
<surname>Stefanis</surname> <given-names>L</given-names>
</name>
<name>
<surname>Stathopoulos</surname> <given-names>P</given-names>
</name>
</person-group>. <article-title>The mTOR signaling pathway in multiple sclerosis; from animal models to human data</article-title>. <source>Int J Mol Sci</source>. (<year>2022</year>) <volume>23</volume>:<page-range>8077</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.3390/ijms23158077</pub-id>
</citation>
</ref>
<ref id="B134">
<label>134</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname> <given-names>J</given-names>
</name>
<name>
<surname>Du</surname> <given-names>YL</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>JW</given-names>
</name>
<name>
<surname>Hu</surname> <given-names>XG</given-names>
</name>
<name>
<surname>Gu</surname> <given-names>LF</given-names>
</name>
<name>
<surname>Li</surname> <given-names>XM</given-names>
</name>
<etal/>
</person-group>. <article-title>Neuroligin 3 regulates dendritic outgrowth by modulating Akt/mTOR signaling</article-title>. <source>Front Cell Neurosci</source>. (<year>2019</year>) <volume>13</volume>:<elocation-id>518</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fncel.2019.00518</pub-id>
</citation>
</ref>
<ref id="B135">
<label>135</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>J</given-names>
</name>
<name>
<surname>Gabuzda</surname> <given-names>D</given-names>
</name>
</person-group>. <article-title>Reconstitution of human immunodeficiency virus-induced neurodegeneration using isolated populations of human neurons, astrocytes, and microglia and neuroprotection mediated by insulin-like growth factors</article-title>. <source>J&#xa0;Neurovirol</source>. (<year>2006</year>) <volume>12</volume>:<page-range>472&#x2013;91</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1080/13550280601039659</pub-id>
</citation>
</ref>
<ref id="B136">
<label>136</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Villa-Gonzalez</surname> <given-names>M</given-names>
</name>
<name>
<surname>Martin-Lopez</surname> <given-names>G</given-names>
</name>
<name>
<surname>Perez-Alvarez</surname> <given-names>MJ</given-names>
</name>
</person-group>. <article-title>Dysregulation of mTOR Signaling after Brain Ischemia</article-title>. <source>Int J Mol Sci</source>. (<year>2022</year>) <volume>23</volume>:<page-range>2814</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.3390/ijms23052814</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>