<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" article-type="research-article" dtd-version="2.3" xml:lang="EN">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2023.1205834</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Dapagliflozin alleviates renal inflammation and protects against diabetic kidney diseases, both dependent and independent of blood glucose levels</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Cai</surname><given-names>Anxiang</given-names>
</name>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/2274397"/>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Shen</surname><given-names>Jianxiao</given-names>
</name>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1032275"/>
</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Yang</surname><given-names>Xiaoqian</given-names>
</name>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1640911"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shao</surname><given-names>Xinghua</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1877731"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Gu</surname><given-names>Leyi</given-names>
</name>
<xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1201348"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Mou</surname><given-names>Shan</given-names>
</name>
<xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1322770"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Che</surname><given-names>Xiajing</given-names>
</name>
<xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref>
<uri xlink:href="https://loop.frontiersin.org/people/1288680"/>
</contrib>
</contrib-group>
<aff id="aff1"><institution>Department of Nephrology, Molecular Cell Lab for Kidney Disease, Ren Ji Hospital, Shanghai Jiao Tong University School of Medicine</institution>, <addr-line>Shanghai</addr-line>, <country>China</country></aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Xuchu Que, University of California, San Diego, United States</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Xiaoxin Wang, Georgetown University Medical Center, United States; Jingbo Pang, University of Illinois Chicago, United States</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Xiajing Che, <email xlink:href="mailto:chexj@126.com">chexj@126.com</email>; Shan Mou, <email xlink:href="mailto:shan_mou@shsmu.edu.cn">shan_mou@shsmu.edu.cn</email>; Leyi Gu, <email xlink:href="mailto:guleyi@aliyun.com">guleyi@aliyun.com</email>
</p>
</fn>
<fn fn-type="equal" id="fn002">
<p>&#x2020;These authors have contributed equally to this work and share first authorship</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>09</day>
<month>11</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1205834</elocation-id>
<history>
<date date-type="received">
<day>14</day>
<month>04</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>06</day>
<month>10</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Cai, Shen, Yang, Shao, Gu, Mou and Che</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Cai, Shen, Yang, Shao, Gu, Mou and Che</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<sec>
<title>Introduction</title>
<p>Diabetic kidney disease (DKD) has become the leading cause of end-stage renal disease worldwide. Therefore, efforts to understand DKD pathophysiology and prevent its development at the early phase are highly warranted.</p>
</sec>
<sec>
<title>Methods</title>
<p>Here, we analyzed kidneys from healthy mice, diabetic mice, and diabetic mice treated with the sodium-glucose cotransporter 2 inhibitor dapagliflozin using ATAC and RNA sequencing. The findings were verified at the protein levels and in cultured cells.</p>
</sec>
<sec>
<title>Results</title>
<p>Our combined method of ATAC and RNA sequencing revealed <italic>Csf2rb</italic>, <italic>Btla</italic>, and <italic>Isg15</italic> as the key candidate genes associated with hyperglycemia, azotemia, and albuminuria. Their protein levels were altered together with multiple other inflammatory cytokines in the diabetic kidney, which was alleviated by dapagliflozin treatment. Cell culture of immortalized renal tubular cells and macrophages unraveled that dapagliflozin could directly effect on these cells <italic>in vitro</italic> as an anti-inflammatory agent independent of glucose concentrations. We further proved that dapagliflozin attenuated ischemia/reperfusion-induced chronic kidney injury and renal inflammation in mice.</p>
</sec>
<sec>
<title>Discussion</title>
<p>Overall, our data emphasize the importance of inflammatory factors to the pathogenesis of DKD, and provide valuable mechanistic insights into the renoprotective role of dapagliflozin.</p>
</sec>
</abstract>
<kwd-group>
<kwd>diabetic kidney disease</kwd>
<kwd>sodium-glucose cotransporter 2 inhibitors</kwd>
<kwd>inflammation</kwd>
<kwd>renal tubular cell</kwd>
<kwd>macrophage</kwd>
</kwd-group>
<counts>
<fig-count count="9"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="45"/>
<page-count count="16"/>
<word-count count="7550"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Inflammation</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>With the increasing prevalence of diabetes mellitus, diabetic kidney disease (DKD) has become the leading cause of end-stage renal disease (ESRD) worldwide, burdening approximately half of the patients with type 2 diabetes mellitus and one-third with type 1 diabetes mellitus (<xref ref-type="bibr" rid="B1">1</xref>, <xref ref-type="bibr" rid="B2">2</xref>). Patients with DKD naturally undergo glomerular hyperfiltration, progressive albuminuria, and glomerular filtration rate decline before finally developing ESRD (<xref ref-type="bibr" rid="B2">2</xref>). Undoubtedly, efforts to explore DKD pathophysiology and prevent its progression at the early phase would benefit DKD patients, improving their life quality and prognosis.</p>
<p>Previous studies to investigate the pathomechanism of DKD unraveled the effects of metabolic and hemodynamic factors on intrinsic renal cells, including glomerular endothelial cells, mesangial cells, podocytes, and tubular cells (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B3">3</xref>). However, emerging evidence has proved that systemic and local renal inflammation plays a crucial role in the pathogenesis of DKD (<xref ref-type="bibr" rid="B4">4</xref>). Among various inflammatory cells, macrophage infiltration is apparent in the DKD glomerulus, and its activation is closely associated with the severity of the disease (<xref ref-type="bibr" rid="B5">5</xref>).</p>
<p>Inhibition of the sodium-glucose cotransporter 2 (SGLT2) in the renal proximal tubular cells represents an effective anti-hyperglycemic strategy, which also benefits the kidney and cardiovascular function of diabetic patients (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B7">7</xref>). Dapagliflozin is a promising SGLT2 inhibitor with broad clinical application, which can benefit patients through glucose lowering, weight loss, and blood pressure reduction. In the long term, dapagliflozin has been demonstrated to sustain the estimated glomerular filtration rate, and reduce the risk of ESRD and kidney-related or cardiovascular death in patients with DKD or non-diabetic chronic kidney diseases (CKD) (<xref ref-type="bibr" rid="B8">8</xref>&#x2013;<xref ref-type="bibr" rid="B10">10</xref>). Current mechanistic understanding of the renoprotective effect of SGLT2 inhibitors focused on renal microvascular hemodynamics and renal intrinsic cell metabolism (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B7">7</xref>), whereas how this therapy could regulate renal inflammation remains largely unclear.</p>
<p>In this study, we performed RNA sequencing to screen for candidate genes of DKD that respond to dapagliflozin treatment <italic>in vivo</italic>. In combination with cell culture <italic>in vitro</italic>, we demonstrated that inflammatory molecules, such as colony-stimulating factor 2 receptor subunit beta (CSF2RB), B and T lymphocyte attenuator (BTLA), and interferon-stimulated gene 15 (ISG15), should play pivotal roles in DKD. In addition to its anti-hyperglycemic function, dapagliflozin could directly affect renal proximal tubular cells and macrophages to exert anti-inflammatory function and protect against DKD.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="s2_1">
<title>Animals and tissue collection</title>
<p>The animal experiments were performed in the Experimental Animal Platform of Renji Hospital, and all animal research was approved by the Institutional Animal Ethics Committee of Renji Hospital. Briefly, 8-week-old male C57BL/6 mice and BKS.Cg-Dock7m +/+ Leprdb/J(db/db) mice were both purchased from SLAC Laboratory Animal Co., Ltd. (Shanghai, China). Mice were housed under controlled ambient conditions with standard chow, a 12-h light/dark cycle (lights on at 7&#xa0;a.m.), and were maintained at 25&#xb0;C. For experiments, mice were divided into three groups: control group (Ctrl, C57BL/6 mice, n=5), diabetic group (Case, db/db mice, n=6), and treatment group (Dapa, db/db mice treated with dapagliflozin [1.0 mg/kg/day, AstraZeneca, Cambridge, UK], n=6) for 6 weeks. Dapagliflozin was administrated in the drinking water by oral gavage once daily in the treatment group, and mice in the Ctrl and Case groups were administrated with the same volume of saline. When the experiment was completed, all mice in the three groups were sacrificed by cervical dislocation after CO<sub>2</sub>-induced narcosis. Immediately afterward, the kidneys and blood were collected.</p>
<p>For ischemia/reperfusion-induced chronic kidney disease mouse models, 14-week-old male C57BL/6 mice were anesthetized and subjected to right kidney nephrectomy. Right kidneys were collected and used as controls, and the left renal artery was clamped for 30 minutes at 37&#xb0;C followed by reperfusion. At 7 days post surgery, kidney tissues and blood and urine samples were collected for further analysis.</p>
</sec>
<sec id="s2_2">
<title>RNA sequencing</title>
<p>Total RNA was isolated using an RNeasy mini kit (Qiagen, Germany). Strand-specific libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation kit (Illumina, USA), following the manufacturer&#x2019;s instructions. Briefly, mRNA was enriched with oligo(dT) beads. Following purification, the mRNA is fragmented into small pieces using divalent cations under 94&#xb0;C for 8&#xa0;min. The cleaved RNA fragments are copied into first-strand cDNA using reverse transcriptase and random primers. This is followed by second-strand cDNA synthesis using DNA Polymerase I and RNase H. These cDNA fragments then go through an end repair process, adding a single&#x2019;A&#x2019;base, and then ligating the adapters. The products are then purified and enriched with PCR to create the final cDNA library. Purified libraries were quantified by Qubit 2.0 Fluorometer (Life Technologies, USA) and validated by Agilent 2100 bioanalyzer (Agilent Technologies, USA) to confirm the insert size and calculate the mole concentration. The clusters were generated by cBot with the library diluted to 10 pM and then were sequenced on the Illumina NovaSeq 6000 (Illumina, USA). The library construction and sequencing were performed at Shanghai Biotechnology Corporation.</p>
</sec>
<sec id="s2_3">
<title>Analysis of RNA sequencing data</title>
<p>For each sample, 33-95M RNA-sequencing (RNA-seq) clean reads were obtained that mapped to the mouse reference genome (mm10) using hierarchical indexing for spliced alignment of transcripts (HISAT2) v2.0.477. Sequencing read counts were calculated using Stringtie78,79 (v.1.3.0). Then, expression levels from different samples were normalized by the Trimmed Mean of M values (TMM) method. The normalized expression levels of different samples were converted to Fragments Per Kilobase of transcript per Million mapped fragments (FPKM). The edgeR package of R was used to analyze the difference between intergroup gene expression, the P-values were calculated, and multiple hypothesis tests were performed. The P-value threshold was determined by controlling the False Discovery Rate (FDR) with the Benjamini algorithm. The corrected P-value is called the q-value. Differentially expressed genes (DEGs) were defined as transcripts with a fold change in expression level (according to the FPKM value) greater than 2.0 and a q-value less than 0.05. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis were performed with the clusterProfiler package of R, and the enrichment criteria included a q-value &lt; 0.05. Heatmaps of specific genes were generated using the heatmap package of R. K-means analysis was performed with Euclidean distances in Multiple Experiment Viewer 4.9, and yielded 10 clusters based on input FPKM values (<xref ref-type="bibr" rid="B11">11</xref>).</p>
</sec>
<sec id="s2_4">
<title>Library construction for ATAC-seq and sequencing procedures</title>
<p>Briefly, a total of 20,000 cells per sample was washed twice with 50 &#xb5;L of cold Dulbecco&#x2019;s Phosphate-Buffered Saline and re-suspended in 50 &#xb5;L of lysis buffer [10 mM tris-HCl (pH 7.4), 10 mM NaCl, 3 mM MgCl2, and 0.1% (v/v) NP-40 substitute (Sigma-Aldrich, 11332473001)]. The suspension of nuclei was then centrifuged for 10&#xa0;min at 500g at 4&#xb0;C, followed by the addition of 50 &#xb5;L of transposition reaction mix (10 &#xb5;L of 5&#xd7;TTBL buffer, 4 &#xb5;L of TTE mix, and 36 &#xb5;L of nuclease-free H2O) of TruePrep DNA Library Prep Kit V2 for Illumina (Vazyme Biotech, TD501). Samples were then incubated at 37&#xb0;C for 30&#xa0;min. DNA was isolated using the QIAquick PCR Purification Kit (QIAGEN, 28106). ATAC-seq libraries were first subjected to five cycles of pre-amplification using NEBNext High-Fidelity 2X PCR Master Mix (New England Biolabs, M0541S). To determine the suitable number of cycles required for the second round of PCR, the library was assessed by qPCR using NEBNext High-Fidelity 2X PCR Master Mix with SYBR Green I Nucleic Acid Gel Stain (Thermo Fisher Scientific, S7563) and then PCR amplified for the appropriate number of cycles. Libraries were purified with the QIAquick PCR Purification Kit. Library quality was checked using the High Sensitivity DNA Analysis Kit (Agilent, 5067-4626). Last, 2 X 150 paired-end sequencing was performed on an Illumina Nova seq (Illumina, San Diego, CA). The library construction and sequencing were performed at Shanghai Biotechnology Corporation.</p>
</sec>
<sec id="s2_5">
<title>ATAC data processing and analysis</title>
<p>Alignment and peak-calling of ATAC sequencing data were performed using the ENCODE-DCC ATAC-Seq pipeline (<ext-link ext-link-type="uri" xlink:href="https://github.com/ENCODE-DCC/atacseq-pipeline">https://github.com/ENCODE-DCC/atacseq-pipeline</ext-link>) (ENCODE Project Consortium, 2012). Briefly, data were aligned to the mouse reference genome (mm10) using Bowtie2. Aligned data were filtered for PCR duplicates, blacklisted regions, and shifted +4bp for the + strand and -5bp for the - strand. Peaks were called using MACS2. Differential peak calling was performed using Diffbind (DiffBind,<ext-link ext-link-type="uri" xlink:href="http://bioconductor.org/packages/release/bioc/vignettes/DiffBind/inst/doc/DiffBind.pdf.">http://bioconductor.org/packages/release/bioc/vignettes/DiffBind/inst/doc/DiffBind.pdf.</ext-link>). Motif enrichment was performed using Hypergeometric Optimization of the Motif EnRichment program (HOMER) version 4.1.</p>
</sec>
<sec id="s2_6">
<title>Data analyses tools</title>
<p>Pathway enrichment analysis was performed on the DEGs using the Gene Ontology (<ext-link ext-link-type="uri" xlink:href="http://www.geneontology.org">www.geneontology.org</ext-link>) and the Kyoto Encyclopedia of Genes and Genomes (<ext-link ext-link-type="uri" xlink:href="https://www.kegg.jp/">https://www.kegg.jp/</ext-link>) databases.</p>
</sec>
<sec id="s2_7">
<title>Proteinuria, BUN, and Creatinine analysis</title>
<p>Mouse urine albumin concentration and urine creatinine concentration were measured using the Albumin Creatinine Ratio Assay Kit (ab241018) from Abcam. The excretion of albumin is expressed as the urinary albumin creatinine ratio (UACR). Urine albumin concentration was confirmed by loading 1 &#x3bc;l urine sample per lane on a sodium dodecyl sulfate-polyacrylamide gel for electrophoresis, followed by Coomassie blue staining. 1 and 5 &#x3bc;g bovine serum albumin (BSA) were loaded as controls for albuminuria. BUN and plasma creatinine levels were measured using a Liquid Urea Nitrogen Reagent Set and Creatinine Assay kit (Nanjing Jiancheng Bioengineering Institute, China) according to the manufacturer&#x2019;s protocol.</p>
</sec>
<sec id="s2_8">
<title>Histopathology analysis</title>
<p>Renal tissue harvested from animals was washed with 0.9% saline, fixed in 10% neutral buffered formalin, and then embedded in 10% paraffin. Sections (4 &#xb5;m thick) were stained with periodic acid-Schiff staining (PAS) for further microscopic analysis. Three consecutive glomerular cross-sections from each sample were photographed by a nephropathologist, blinded to the source of the tissue, using a digital camera (Olympus DP74; Olympus America, Melville, New York), and imported into Image-Pro Plus (Media Cybernetics, Silver Spring, Maryland).</p>
</sec>
<sec id="s2_9">
<title>Cell culture</title>
<p>Immortalized mouse macrophage cell line (RAW264.7) was cultured in Dulbecco&#x2019;s modified Eagle&#x2019;s medium (DMEM, HyClone) supplemented with 10% heat-inactivated fetal bovine serum (Gibco), 100 U/mL penicillin, and 100 &#x3bc;g/mL streptomycin (Sigma) at 37&#xb0;C under 5% CO<sub>2</sub>. Immortalized human renal proximal tubular cell line (HK-2) was cultured in DMEM/F12 medium (HyClone) supplemented with 10% heat-inactivated fetal bovine serum (Gibco), 100 U/mL penicillin, and 100 &#x3bc;g/mL streptomycin (Sigma) at 37&#xb0;C under 5% CO<sub>2</sub>.</p>
<p>Before experiments, cells were seeded onto 6-well plates to reach a confluence of 70% and then starved in serum-free DMEM overnight. Cells were then divided into three groups: for the osmotic control group (Ctrl), cells were cultured in DMEM medium containing 5mM glucose and 30mM mannitol; for the high-glucose group (Case), cells were cultured in DMEM medium containing 35mM glucose; for the dapagliflozin treatment group (Dapa), cells were cultured in DMEM medium containing 35mM glucose and 20&#xb5;M dapagliflozin. Macrophages were incubated for 48 hours, and renal proximal tubular cells were incubated for 72 hours.</p>
</sec>
<sec id="s2_10">
<title>Western blotting</title>
<p>Proteins from mice kidneys or cultured cells were extracted using RIPA lysis buffer supplemented with a cocktail of protease and phosphatase inhibitors. The total protein concentration was measured using a BCA assay, and equal amounts of protein were loaded on PAGE 4-20% gradient gels (GenScript) and transferred to PVDF membranes (Millipore). The primary antibodies were mouse anti-CSF2RB (Santa Cruz Biotechnology), rabbit anti-BTLA (Invitrogen), mouse anti-ISG15 (Santa Cruz Biotechnology), rabbit anti-SGLT2 (Proteintech), and mouse anti-&#x3b2;-actin (Cell Signaling Technology). Blots were developed using Omni ECL reagent (EpiZyme).</p>
</sec>
<sec id="s2_11">
<title>RNA extraction and real-time PCR</title>
<p>Total RNA from cultured cells was extracted using TRIzol Reagent (Invitrogen). RNA quality was checked by controlling the OD at 260 and 280 nm. cDNA was synthesized from 1 &#xb5;g RNA using the Hifair II 1st Strand cDNA Synthesis Super Mix (Yeasen, China). Real-time PCR was performed with the Roche Light Cycler 480 detection system using SYBR green PCR master Mix (Roche Diagnostics). Specific primers for target mRNAs (listed in the <xref ref-type="supplementary-material" rid="SM1"><bold>Supplementary Materials</bold></xref>) were used for amplification, and a standard curve was generated for each targeted transcript. All relative expression levels were normalized to &#x3b2;-actin expression, and the results were analyzed using the &#x394;&#x394;Ct method.</p>
</sec>
<sec id="s2_12">
<title>Antibody array assay and enzyme-linked immunosorbent assay</title>
<p>Mouse whole kidney lysate and cell culture medium supernatant of RAW264.7 were scanned using the QAM-INF-1 array (Raybiotech), and cell culture medium supernatant of HK-2 was scanned using the Quantibody Human TH17 array (Raybiotech) to obtain the raw data. Then, the Raybiotech software was used to remove the chip background and normalize the original data. Differentially expressed proteins (DEPs) between different groups were identified using the limma package (Version 3.42.2) in R software (RStudio, PBC, Boston, MA, USA). Individual p-values were calculated and converted to adjusted p-values (adj. p. val) for comparisons by false discovery rate correction of the Benjamini and Hochberg test. A cutoff point of adj. p. val &lt; 0.05 and |fold change (FC)| &gt; 1.2 were used to select DEPs. Then, the heatmap, and scatter plot of the DEPs were drawn using the ggplot2 package in R software. The expression levels of a specific protein of interest were determined by ELISA. The raw data were detailed in the <xref ref-type="supplementary-material" rid="SM1"><bold>Supplementary Material</bold></xref>.</p>
</sec>
<sec id="s2_13">
<title>Functional enrichment analyses and annotation of DEPs</title>
<p>The DEPs were uploaded to an online bioinformatics database, the Database for Annotation, Visualization, and Integrated Discovery (DAVID) version 6.8 Beta (<ext-link ext-link-type="uri" xlink:href="https://david-d.ncifcrf.gov/">https://david-d.ncifcrf.gov/</ext-link>), for enrichment analysis, including gene ontology (GO) pathways. The obtained results were visualized in the R ggplot2 package and a p-value of &lt;0.05 was considered statistically significant.</p>
</sec>
<sec id="s2_14">
<title>Statistical analysis</title>
<p>Data analysis was performed using GraphPad Prism software. Differences between two groups were analyzed using unpaired Student&#x2019;s two-tailed t-test, and differences between more than two groups were analyzed using a one-way ANOVA test. Each experiment was replicated for more than three times. P values are presented as follows: *, P&#x2009;&lt;&#x2009;0.05; **, P&#x2009;&lt;&#x2009;0.01; ***, P&#x2009;&lt;&#x2009;0.001; NS, not significant.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>Results</title>
<sec id="s3_1">
<title>Dapagliflozin alleviated hyperglycemia and kidney injury in type 2 diabetic mice <italic>in vivo</italic>
</title>
<p>Transgenic db/db mice (Case) of 14-week-old showed spontaneous type 2 diabetes mellitus phenotype: compared with the healthy mice (Ctrl), diabetic mice had augmented body weight (22.9 &#xb1; 2.9&#xa0;g in Ctrl versus 47.8 &#xb1; 9.2&#xa0;g in Case, P&lt;0.0001) and hyperglycemia (3.9 &#xb1; 0.7 mM in Ctrl versus 22.7 &#xb1; 4.9 mM in Case, P&lt;0.0001) (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1A, B</bold></xref>). In contrast, db/db mice given oral administration of 1 mg/kg dapagliflozin for 6 weeks (Dapa) presented significantly lower blood glucose levels (11.8 &#xb1; 2.0 mM in Dapa, P=0.0006 compared with Case), though their bodyweight displayed no significant changes (55.3 &#xb1; 1.7&#xa0;g in Dapa, P=0.1854 compared with Case) (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1A, B</bold></xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Dapagliflozin alleviated hyperglycemia and kidney injury in type 2 diabetic mice in vivo. <bold>(A)</bold> Body weight of normal (Ctrl), diabetic (Case), and dapagliflozin-treated diabetic (Dapa) 14-week-old mice. <bold>(B)</bold> Blood glucose levels of 14-week-old mice in the Ctrl, Case, and Dapa groups. <bold>(C)</bold> Serum creatinine levels of 14-week-old mice in the Ctrl, Case, and Dapa groups. <bold>(D)</bold> Blood urea nitrogen levels of 14-week-old mice in the Ctrl, Case, and Dapa groups. <bold>(E)</bold> Urinary albumin creatinine ratio of 14-week-old mice in the Ctrl, Case, and Dapa groups. <bold>(F)</bold> Periodic acid&#x2013;Schiff (PAS)&#x2013;stained sections of 14-week-old mouse kidneys in the Ctrl, Case, and Dapa groups. NS, not significant. *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001, one-way ANOVA test. Bar = 20 &#x3bc;m.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g001.tif"/>
</fig>
<p>As for kidney functions, db/db mice presented higher serum creatinine levels (51.1 &#xb1; 2.8 &#xb5;M in Ctrl versus 63.7 &#xb1; 6.0 &#xb5;M in Case, P&lt;0.0001) and elevated urinary albumin creatinine ratio (UACR, 0.0011 &#xb1; 0.0003 in Ctrl versus 0.0037 &#xb1; 0.0006 in Case, P&lt;0.0001) (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1C&#x2013;E</bold></xref>). Treatment with dapagliflozin remarkably ameliorated azotemia (serum creatinine=53.4 &#xb1; 5.0 &#xb5;M in Dapa, P=0.0215 compared with Case) and albuminuria (UACR=0.0024 &#xb1; 0.0004 in Dapa, P=0.0059 compared with Case) in diabetic mice (<xref ref-type="fig" rid="f1"><bold>Figures&#xa0;1C&#x2013;E</bold></xref>). Periodic acid-Schiff staining of renal tissue from the Case group exhibited mild-to-moderate diabetic renal structural alterations, including mesangial area broadening, mesangial matrix increase, and mesangial hyperplasia, while these changes were alleviated in mice receiving dapagliflozin treatment (<xref ref-type="fig" rid="f1"><bold>Figure&#xa0;1F</bold></xref>). In short, dapagliflozin successfully rescued both hyperglycemia and diabetic nephropathy in diabetic mice.</p>
</sec>
<sec id="s3_2">
<title>Combined ATAC and RNA sequencing revealed potential candidate genes for diabetic kidney disease</title>
<p>To determine potential candidate genes that might participate in the pathogenesis of DKD, we performed a combined analysis of RNA sequencing and Assay for Transposase Accessible Chromatin with high-throughput sequencing (ATAC-seq) on mice whole kidney lysates. Mice displayed distinguished RNA expression patterns between the Ctrl group (Con.1-5) and the Case group (Db.1-6)(<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2A</bold></xref>). Functional enrichment analysis utilizing the gene ontology (GO) database and Kyoto Encyclopedia of Gene and Genome (KEGG) database suggested that, in addition to metabolic disorders, diabetic mice showed immune system alterations that might involve response to interferon (<xref ref-type="fig" rid="f2"><bold>Figures&#xa0;2B&#x2013;D</bold></xref>). To be precise, analysis based on the KEGG database revealed pathways involving multiple material metabolism, inflammation and autoimmune-related diseases, and antigen processing and presentation (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2C</bold></xref>); while GO terms indicated material metabolism, antigen processing and presentation via MHC complex, and response to interferon (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2D</bold></xref>). Moreover, despite individual discrepancies, mice treated with dapagliflozin (Db.7-12) also presented different RNA expression patterns to the Case group (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2E</bold></xref>). Similarly, the top DEGs of these two groups were enriched in the immune-associated pathways, especially the response to interferon (<xref ref-type="fig" rid="f2"><bold>Figures&#xa0;2F&#x2013;H</bold></xref>). In the analysis of Dapa versus Case, the KEGG database unraveled pathways involving inflammation and autoimmune-related diseases, helper T cell differentiation, and antigen processing and presentation (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2G</bold></xref>); GO terms also suggested antigen processing and presentation, and response to interferon (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2H</bold></xref>).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>RNA sequencing revealed differentially expressed genes and pathways in diabetic kidney disease and dapagliflozin treatment. <bold>(A)</bold> Heatmap indicating distinct gene expression patterns of normal (Con1-5) versus diabetic (Db1-6) mouse kidneys. <bold>(B)</bold> KEGG classification analysis suggested that DEGs between normal and diabetic mouse kidneys were enriched in the immune system (red). <bold>(C)</bold> KEGG enrichment analysis indicating the top 30 pathways enriched in DEGs between normal and diabetic mouse kidneys. <bold>(D)</bold> GO enrichment analysis indicating the top 30 pathways enriched in DEGs between normal and diabetic mouse kidneys, highlighting interferon-related pathways (red). <bold>(E)</bold> Heatmap indicating distinct gene expression patterns of diabetic (Db1-6) versus dapagliflozin-treated diabetic (Db7-12) mouse kidneys. <bold>(F)</bold> KEGG classification analysis suggesting DEGs between diabetic and dapagliflozin-treated diabetic mouse kidneys were enriched in the immune system (red). <bold>(G)</bold> KEGG enrichment analysis indicating the top 30 pathways enriched in DEGs between diabetic and dapagliflozin-treated diabetic mouse kidneys. <bold>(H)</bold> GO enrichment analysis indicating the top 30 pathways enriched in DEGs between diabetic and dapagliflozin-treated diabetic mouse kidneys, highlighting interferon-related pathways (red).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g002.tif"/>
</fig>
<p>Furthermore, we performed a K-means analysis with the aim of revealing the co-ordinance between Ctrl and Dapa groups. According to their different expression patterns among the three groups, the DEGs were divided into 10 clusters. We noticed cluster 2 and cluster 3, in which DEGs showed upregulation in the Case group but downregulated by dapagliflozin treatment (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3</bold></xref>). GO terms and the KEGG database indicated that pathways enriched in these two clusters were immune response, response to interferon-gamma (IFN-&#x3b3;), antigen processing and presentation, and inflammation-related diseases (<xref ref-type="fig" rid="f3"><bold>Figure&#xa0;3</bold></xref>). In addition, DEGs in cluster 5 and cluster 9 also presented co-ordinance between Ctrl and Dapa groups: pathways enriched in cluster 5 mainly involved material metabolism, endocrine regulation, and renal intrinsic cells; while pathways enriched in cluster 9 were associated with immunoglobulin, PPAR, and FoxO pathways (<xref ref-type="supplementary-material" rid="SM1"><bold>Supplemental Figure 1</bold></xref>).</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>K-means analysis of RNA sequencing results. K-means analysis yielded 10 clusters with different expression patterns among the Ctrl, Case, and Dapa groups. Cluster 2 and 3 showed apparently different expression patterns among Ctrl, Case, and Dapa groups. <bold>(A)</bold> Expression patterns of genes in Cluster 2 with the top 10 enriched pathways listed according to GO terms. <bold>(B)</bold> Expression patterns of genes in Cluster 3 with the top 10 enriched pathways listed according to GO terms. <bold>(C)</bold> Expression patterns of genes in Cluster 2 with the top 10 enriched pathways listed according to the KEGG database. <bold>(D)</bold> Expression patterns of genes in Cluster 3 with the top 10 enriched pathways listed according to the KEGG database.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g003.tif"/>
</fig>
<p>Combining the results of RNA sequencing and ATAC analysis, we identified three inflammation-associated genes that showed opposite regulation trends in Case versus Ctrl and Dapa versus Case, i.e., <italic>Isg15</italic>, <italic>Btla</italic>, and <italic>Csf2rb</italic> (<xref ref-type="fig" rid="f4"><bold>Figure&#xa0;4</bold></xref>). <italic>Isg15</italic> (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4A&#x2013;C</bold></xref>) and <italic>Csf2rb</italic> (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4A, F&#x2013;G</bold></xref>) presented upregulated chromatin accessibility and mRNA levels in diabetic mice and attenuated by dapagliflozin administration. In contrast, <italic>Btla</italic> (<xref ref-type="fig" rid="f4"><bold>Figures&#xa0;4A, D, E</bold></xref>) displayed downregulated chromatin accessibility and mRNA levels in the Case group and restored in the Dapa group. These genes were further analyzed due to their significant correlation with the clinical features of DKD (<xref ref-type="fig" rid="f5"><bold>Figure&#xa0;5</bold></xref>).</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Combined ATAC and RNA sequencing revealed potential candidate genes for diabetic kidney disease. <bold>(A)</bold> Violin plot of RNA sequencing indicating <italic>Isg15</italic>, <italic>Csf2rb</italic>, and <italic>Btla</italic> as potential candidate genes that were upregulated in diabetic mouse kidneys and downregulated by dapagliflozin treatment (<italic>Isg15</italic> and <italic>Csf2rb</italic>), or downregulated in diabetic mouse kidneys and upregulated by dapagliflozin treatment (<italic>Btla</italic>). <bold>(B)</bold> ATAC analysis indicating elevated chromatin accessibility of <italic>Isg15</italic> in diabetic mouse kidneys that was reduced by dapagliflozin treatment, with corresponding quantifications in <bold>(C)</bold>. <bold>(D)</bold> ATAC analysis indicating decreased chromatin accessibility of <italic>Btla</italic> in diabetic mouse kidneys that was augmented by dapagliflozin treatment, with corresponding quantifications in <bold>(E)</bold>. <bold>(F)</bold> ATAC analysis indicating elevated chromatin accessibility of <italic>Csf2rb</italic> in diabetic mouse kidneys that was reduced by dapagliflozin treatment, with corresponding quantifications in <bold>(G)</bold>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g004.tif"/>
</fig>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Isg15, Csf2rb, and Btla expression levels were associated with clinical features of diabetic kidney disease. <bold>(A)</bold> Univariate analysis demonstrating a positive correlation between <italic>Isg15</italic> expression levels and blood glucose levels. <bold>(B)</bold> Univariate analysis demonstrating a positive correlation between <italic>Isg15</italic> expression levels and urinary albumin creatinine ratio. <bold>(C)</bold> Univariate analysis demonstrating a negative correlation between <italic>Btla</italic> expression levels and blood glucose levels. <bold>(D)</bold> Univariate analysis demonstrating a negative correlation between <italic>Btla</italic> expression levels and serum creatinine levels. <bold>(E)</bold> Univariate analysis demonstrating a negative correlation between <italic>Btla</italic> expression levels and urinary albumin creatinine ratio. <bold>(F)</bold> Univariate analysis demonstrating a positive correlation between <italic>Csf2rb</italic> expression levels and blood glucose levels. <bold>(G)</bold> Univariate analysis demonstrating a positive correlation between <italic>Csf2rb</italic> expression levels and serum urea nitrogen levels. <bold>(H)</bold> Univariate analysis demonstrating a positive correlation between <italic>Csf2rb</italic> expression levels and urinary albumin creatinine ratio.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g005.tif"/>
</fig>
<p>We first noticed <italic>Isg15</italic>, a pro-inflammatory gene, as functional enrichment analysis of RNA sequencing highlighted interferon-related pathways (<xref ref-type="fig" rid="f2"><bold>Figure&#xa0;2</bold></xref>). In the current study, the univariate analysis including all mice from three groups demonstrated that <italic>Isg15</italic> expression levels were positively correlated to hyperglycemia and UACR (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5A, B</bold></xref>), suggesting its deleterious role in DKD. We also found positive correlations between another pro-inflammatory gene, <italic>Csf2rb</italic> mRNA levels in the kidney and the blood glucose concentration, serum urea nitrogen levels, and UACR of diabetic mice (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5C&#x2013;E</bold></xref>), implying that CSF2RB should be detrimental in DKD. On the contrary, the anti-inflammatory gene <italic>Btla</italic> presented a negative correlation to serum creatinine concentration and UACR (<xref ref-type="fig" rid="f5"><bold>Figures&#xa0;5F&#x2013;H</bold></xref>). Therefore, we concluded that DKD is associated with renal inflammation, as pro-inflammatory cytokines would exacerbate while anti-inflammatory might attenuate kidney injury.</p>
</sec>
<sec id="s3_3">
<title>Dapagliflozin regulated the expression of candidate genes and attenuated renal inflammation in type 2 diabetic mice <italic>in vivo</italic>
</title>
<p>Next, we tested these inflammation-related molecules at the protein level in the mice kidneys. Diabetic mice presented a significantly higher level of ISG15 than the normal controls, which was alleviated by the dapagliflozin treatment (<xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6A, B</bold></xref>). In contrast, reduced expression of the immunosuppressor BTLA was detected in the Case group that was restored by dapagliflozin administration (<xref ref-type="fig" rid="f6"><bold>Figures&#xa0;6A, B</bold></xref>). Although CSF2RB was nearly undetectable at the protein level in the whole kidney lysates, these inflammatory proteins were consistent with their mRNA levels and the univariate analysis.</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Dapagliflozin regulated the expression of candidate genes and attenuated renal inflammation in type 2 diabetic mice in vivo. <bold>(A)</bold> Western blot analysis showing BTLA and ISG15 protein levels in normal (Ctrl), diabetic (Case), and dapagliflozin-treated diabetic (Dapa) mouse kidneys, with corresponding quantifications in <bold>(B)</bold>. <bold>(C)</bold> Scatter plot indicating distinct protein expression levels of normal versus diabetic mouse kidneys. <bold>(D)</bold> GO enrichment analysis suggesting leukocyte activation and JAK-STAT pathway activation in diabetic mouse kidneys. <bold>(E)</bold> Scatter plot indicating distinct protein expression levels of diabetic versus dapagliflozin-treated diabetic mouse kidneys. <bold>(F)</bold> Heatmap showing different protein levels of inflammatory cytokines in diabetic (Db) and dapagliflozin-treated diabetic (Dapa) mouse kidneys. *P &lt; 0.05, ***P &lt; 0.001, one-way ANOVA test.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g006.tif"/>
</fig>
<p>To further explore the effect of dapagliflozin on renal inflammation <italic>in vivo</italic>, we performed an inflammation-associated antibody array assay analysis of mice whole kidney lysates, and found significant differences in the protein components of mice kidneys from different groups. In comparison with the Ctrl group, diabetic mice presented both upregulated and downregulated proteins (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6C</bold></xref>). Gene ontology analysis revealed that the Case group displayed an apparent profile of inflammatory cell proliferation and activation, as well as JAK-STAT pathway activation (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6D</bold></xref>). In contrast, mice treated with dapagliflozin showed overall downregulated inflammatory proteins in the kidney lysates (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6E</bold></xref>). Dapagliflozin administration triggered significant downregulation of two well-characterized inflammatory markers, tumor necrosis factor-alpha (TNF-&#x3b1;) and interleukin-1beta (IL-1&#x3b2;) (<xref ref-type="fig" rid="f6"><bold>Figure&#xa0;6F</bold></xref>). Furthermore, dapagliflozin reduced the expression of multiple pro-inflammatory molecules in the diabetic kidney: CD30L, also known as CD153, can bind CD30 to promote senescence-associated tertiary lymphoid tissue expansion, facilitating local T and B cell interactions in the chronically inflamed kidney (<xref ref-type="bibr" rid="B12">12</xref>); IL-3 can act as the ligand of the aforementioned receptor CSF2RB (<xref ref-type="bibr" rid="B13">13</xref>); IL-15 is a pluripotent cytokine that supports both myeloid immune cells and lymphocytes, regulating innate and adaptive immune system (<xref ref-type="bibr" rid="B14">14</xref>); B lymphocyte chemoattractant, also called CXCL13, plays a role in diabetic pain and production of pro-inflammatory cytokines IL-1&#x3b2;, TNF-&#x3b1;, and IL-6 (<xref ref-type="bibr" rid="B15">15</xref>). In summary, dapagliflozin administration attenuated the overall inflammatory profile of the diabetic kidney in mice.</p>
</sec>
<sec id="s3_4">
<title>Dapagliflozin presented an anti-inflammatory and anti-fibrotic effect on human renal tubular cells independent of glucose concentrations <italic>in vitro</italic>
</title>
<p>With the aim of dissection of the renoprotective role of dapagliflozin at the cell level, we performed a cell culture of the human proximal tubular cell line (HK-2) with high expression of the target receptor SGLT2 (<xref ref-type="bibr" rid="B16">16</xref>). We found augmented mRNA levels of <italic>ISG15</italic> in tubular cells cultured in the high-glucose medium (Case group) versus cells cultured in normal-glucose medium (Ctrl group), which was alleviated by dapagliflozin treatment under the same high glucose concentration conditions (Dapa group) (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7A</bold></xref>). However, there was no expression of <italic>CSF2RB</italic> in proximal tubular cells, and the level of <italic>BTLA</italic> was kept almost unchanged regardless of the glucose or dapagliflozin treatment, indicating that dapagliflozin did not directly impact BTLA expression in renal tubular cells (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7A</bold></xref>). Correspondingly, immunoblot presented elevated ISG15 expression in the Case group that was attenuated in the Dapa group (<xref ref-type="fig" rid="f7"><bold>Figures&#xa0;7B, C</bold></xref>). Subsequently, we performed an inflammation-associated antibody array assay analysis of the cell culture medium to further explore dapagliflozin&#x2019;s effect on tubular cells under hyperglycemia. Renal tubular cells tended to produce more inflammatory molecules in the high-glucose medium (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7D</bold></xref>), activating the STAT pathway and promoting inflammation (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7E</bold></xref>). Incubation with dapagliflozin attenuated HK-2 secretion of the inflammatory proteins (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7F</bold></xref>), especially the well-known marker TNF-&#x3b1; and the fibrosis marker transforming growth factor-beta (TGF-&#x3b2;) into the cell culture medium (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7G</bold></xref>), implying an anti-inflammatory, anti-fibrotic role of dapagliflozin in the diabetic kidney. Moreover, we detected amelioration of two other well-characterized inflammation-associated molecules by dapagliflozin treatment, i.e., TNF-&#x3b2; and IFN-&#x3b3; (<xref ref-type="fig" rid="f7"><bold>Figure&#xa0;7G</bold></xref>). Of note, the aforementioned effects of dapagliflozin on HK-2 cells were independent of glucose concentrations, as the Case group and the Dapa group were cultured under the same glucose concentration conditions. We concluded that dapagliflozin served as an anti-inflammatory, anti-fibrotic agent to protect renal proximal tubular cells against DKD independent of glucose concentrations.</p>
<fig id="f7" position="float">
<label>Figure&#xa0;7</label>
<caption>
<p>Dapagliflozin presented an anti-inflammatory and anti-fibrotic effect on human renal tubular cells independent of glucose concentrations in vitro. <bold>(A)</bold> QPCR analysis showing <italic>Btla</italic> and <italic>Isg15</italic> mRNA levels in HK-2 cells cultured in normal-glucose (Ctrl), high-glucose (Case), and high-glucose with dapagliflozin (Dapa) medium. <bold>(B)</bold> Western blot analysis showing BTLA and ISG15 protein levels in HK-2 cells of Ctrl, Case, and Dapa groups, with corresponding quantifications in <bold>(C)</bold>. <bold>(D)</bold> Scatter plot indicating distinct protein expression levels of HK-2 cells in Ctrl versus Case group. <bold>(E)</bold> GO enrichment analysis suggesting STAT pathway activation, inflammatory response, and leukocyte activation pathways in HK-2 cells in the high-glucose medium. <bold>(F)</bold> Scatter plot indicating distinct protein expression levels of HK-2 cells in Case versus Dapa group. <bold>(G)</bold> Heatmap showing different protein levels of inflammatory and fibrotic cytokines in HK-2 cells of Case and Dapa group. NS, not significant. *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001, one-way ANOVA test.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g007.tif"/>
</fig>
</sec>
<sec id="s3_5">
<title>A novel anti-inflammatory role of dapagliflozin in macrophages independent of glucose concentrations <italic>in vitro</italic>
</title>
<p>As macrophages are considered the major leukocyte in the chronically inflamed kidney in diabetes (<xref ref-type="bibr" rid="B5">5</xref>), and our data highlighted the role of antigen-presenting cells and inflammation in DKD, we further investigated the role of dapagliflozin in macrophages. The immortalized mouse macrophage cell line (RAW 264.7) was cultured <italic>in vitro</italic>, and we detected upregulation of ISG15, BTLA, and CSF2RB in the high-glucose medium at both mRNA and protein levels (<xref ref-type="fig" rid="f8"><bold>Figures&#xa0;8A, C</bold></xref>). Surprisingly, with our immunoblot analysis showing SGLT2 expression on macrophages (<xref ref-type="supplementary-material" rid="SM1"><bold>Supplemental Figure 2D</bold></xref>), dapagliflozin treatment significantly alleviated the upregulation of these inflammatory molecules (<xref ref-type="fig" rid="f8"><bold>Figures&#xa0;8A&#x2013;C</bold></xref>). As macrophages might secret various cytokines to interact with multiple cell types, we also detected a series of molecules in the cell culture medium supernatant utilizing an inflammation-associated antibody array assay. Results of DEPs were enriched in the endothelial cell apoptosis process and leukocyte chemotaxis, suggesting that macrophages in hyperglycemia might induce endothelial injury and recruit other leukocytes to exacerbate inflammatory responses (<xref ref-type="fig" rid="f8"><bold>Figures&#xa0;8D, E</bold></xref>). However, dapagliflozin treatment seemed to have little impact on the cytokines in the macrophage cell culture medium supernatant according to the antibody array assay. To deepen our investigations, we tested the role of glucose levels and dapagliflozin in macrophage polarization. High-glucose incubation activated macrophages to express a higher level of <italic>Tnf-&#x3b1;</italic>, <italic>Il-1&#x3b2;</italic>, <italic>iNos</italic>, <italic>Il-10</italic>, and <italic>Tgf-&#x3b2;</italic>, implying complicated macrophage activation and polarization process with a combination of different phenotypes (<xref ref-type="fig" rid="f8"><bold>Figure&#xa0;8F</bold></xref>) (<xref ref-type="bibr" rid="B17">17</xref>). Dapagliflozin treatment attenuated the activation of these macrophages, exerting a seemly &#x201c;calm down&#x201d; effect (<xref ref-type="fig" rid="f8"><bold>Figure&#xa0;8F</bold></xref>). Altogether, these results revealed a novel, unrecognized role of dapagliflozin in regulating inflammatory response via its effect on macrophages and independent of glucose concentrations, and its specific signaling pathways deserve further exploration.</p>
<fig id="f8" position="float">
<label>Figure&#xa0;8</label>
<caption>
<p>A novel anti-inflammatory role of dapagliflozin in macrophages independent of glucose concentrations in vitro. <bold>(A)</bold> QPCR analysis showing <italic>Csf2rb</italic>, <italic>Btla</italic>, and <italic>Isg15</italic> mRNA levels in RAW 264.7 cells cultured in normal-glucose (Ctrl), high-glucose (Case), and high-glucose with dapagliflozin (Dapa) medium. <bold>(B)</bold> Western blot analysis showing CSF2RB, BTLA, and ISG15 protein levels in macrophages of Ctrl, Case, and Dapa groups, with corresponding quantifications in <bold>(C)</bold>. <bold>(D)</bold> Scatter plot indicating distinct protein expression levels of macrophages in Ctrl versus Case group. <bold>(E)</bold> GO enrichment analysis suggesting endothelial cell apoptosis and leukocyte chemotaxis pathways in macrophages in the high-glucose medium. <bold>(F)</bold> Scatter plot indicating distinct protein expression levels of macrophages in Case versus Dapa group. <bold>(G)</bold> QPCR analysis showing <italic>Tnf-&#x3b1;</italic>, <italic>Il-1&#x3b2;</italic>, <italic>iNos</italic>, <italic>Il-10</italic>, and <italic>Tgf-&#x3b2;</italic> mRNA levels in macrophages of Ctrl, Case, and Dapa group. NS, not significant. *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001, one-way ANOVA test.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g008.tif"/>
</fig>
</sec>
<sec id="s3_6">
<title>Dapagliflozin attenuated kidney injury and alleviated renal inflammation in an ischemia/reperfusion-induced mouse CKD model</title>
<p>Considering that our cell culture experiments suggested a blood glucose-independent, anti-inflammatory effect of dapagliflozin, we subsequently explored the potential role of dapagliflozin in healthy mice and mice with CKD induced by ischemia/reperfusion (I/R). Dapagliflozin administration in healthy mice caused no apparent changes in serum creatinine (48.05 &#xb1; 4.7 &#xb5;M in Ctrl versus 45.88 &#xb1; 4.9 &#xb5;M in Ctrl+Dapa, P=0.9294), blood urea nitrogen (8.45 &#xb1; 0.4 mM in Ctrl versus 7.83 &#xb1; 0.8 mM in Ctrl+Dapa, P=0.6332), and blood glucose levels (6.43 &#xb1; 0.5 mM in Ctrl versus 7.40 &#xb1; 0.8 mM in Ctrl+Dapa, P=0.2799) (<xref ref-type="fig" rid="f9"><bold>Figures&#xa0;9A&#x2013;C</bold></xref>). At 7 days post I/R surgery, serum creatinine (74.35 &#xb1; 3.8 &#xb5;M in I/R, P&lt;0.0001) and blood urea nitrogen levels (15.68 &#xb1; 0.6 mM in I/R, P&lt;0.0001) elevated while blood glucose (7.05 &#xb1; 0.7 mM in I/R, P=0.6293) remained unaltered in CKD mice compared with Ctrl mice. In contrast, treatment with dapagliflozin significantly restored kidney function (serum creatinine=55.15 &#xb1; 4.2 &#xb5;M in I/R+Dapa, P=0.0009 compared with I/R; blood urea nitrogen=12.55 &#xb1; 0.7 mM in I/R+Dapa, P=0.0003 compared with I/R) and reduced blood glucose levels (4.63 &#xb1; 0.4 mM in I/R+Dapa, P=0.0024 compared with I/R) in I/R-induced CKD mice (<xref ref-type="fig" rid="f9"><bold>Figures&#xa0;9A&#x2013;C</bold></xref>). Then, we detected the protein levels of BTLA and ISG15 in the mice kidneys. Compared with the Ctrl group, healthy mice treated with dapagliflozin displayed augmented BTLA expression, and their ISG15 expression seemed to decrease but did not reach a significant threshold, probably due to the low ISG15 protein levels at the baseline (<xref ref-type="fig" rid="f9"><bold>Figures&#xa0;9D, E</bold></xref>). Furthermore, I/R surgery downregulated BTLA while upregulated ISG15 in the kidney, and such a pro-inflammatory state was ameliorated by dapagliflozin (<xref ref-type="fig" rid="f9"><bold>Figures&#xa0;9D, E</bold></xref>). As a result, dapagliflozin played a renoprotective, anti-inflammatory role in I/R-induced CKD mice.</p>
<fig id="f9" position="float">
<label>Figure&#xa0;9</label>
<caption>
<p>Dapagliflozin attenuated kidney injury and alleviated renal inflammation in an ischemia/reperfusion-induced mouse CKD model. <bold>(A)</bold> Serum creatinine levels of normal (Ctrl), dapagliflozin-treated normal (Ctrl+Dapa), ischemia/reperfusion-operated (I/R), and dapagliflozin-treated I/R (I/R+Dapa) 14-week-old mice. <bold>(B)</bold> Blood urea nitrogen levels of 14-week-old mice in the Ctrl, Ctrl+Dapa, I/R, and I/R+Dapa groups. <bold>(C)</bold> blood glucose levels of 14-week-old mice in the Ctrl, Ctrl+Dapa, I/R, and I/R+Dapa groups. <bold>(D)</bold> Western blot analysis showing BTLA and ISG15 protein levels in mouse kidneys in the Ctrl, Ctrl+Dapa, I/R, and I/R+Dapa groups, with corresponding quantifications in <bold>(E)</bold>. NS, not significant. *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001, one-way ANOVA test.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-14-1205834-g009.tif"/>
</fig>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<title>Discussion</title>
<p>Utilizing integrated bioinformatic, <italic>in vivo</italic>, and <italic>in vitro</italic> approaches, we have revealed the inflammatory profile of the chronically diseased kidney in diabetes and how SGLT2 inhibitor dapagliflozin could ameliorate DKD. First, we noticed that the immune system showed significant alterations in DKD and was impacted by dapagliflozin administration. Next, with the help of RNA sequencing and ATAC analysis, we identified three key inflammation-related genes, i.e., <italic>Csf2rb</italic>, <italic>Btla</italic>, and <italic>Isg15</italic>, whose mRNA levels were correlated to the severity of DKD. When detecting the protein levels of these molecules, we found that in accordance with the RNA sequencing results, diabetic mice upregulated the pro-inflammatory molecules while downregulated the anti-inflammatory protein BTLA. Furthermore, we dissected the impact of hyperglycemia and the effect of dapagliflozin at the cell level. We demonstrated that high glucose concentration induced inflammatory molecules in renal proximal tubular cells and macrophages, which could be alleviated by dapagliflozin treatment independent of glucose concentrations. Our findings would contribute to the mechanical understanding of DKD and provide novel evidence for the therapeutic effect of dapagliflozin.</p>
<p>In the current study, we based on the bioinformatic analysis of RNA sequencing and ATAC analysis data to screen for key genes that were correlated to the clinical features of DKD and could interact with the anti-hyperglycemic agent dapagliflozin. Intriguingly, the three candidate genes we found were all associated with inflammation: CSF2RB, also known as cytokine receptor common subunit beta, encodes the common &#x3b2; subunit to the receptor of common chain cytokines granulocyte-macrophage colony-stimulating factor (GM-CSF), IL-3, and IL-5 (<xref ref-type="bibr" rid="B13">13</xref>). In addition to the function of hematopoiesis, these cytokines play a pivotal role in inflammatory responses (<xref ref-type="bibr" rid="B13">13</xref>, <xref ref-type="bibr" rid="B18">18</xref>), as is the case of chronic microvascular inflammation in DKD. ISG15 is a ubiquitin-like protein that can either be secreted as a free protein or bound target protein to induce a reversible post-translational modification called ISGylation (<xref ref-type="bibr" rid="B19">19</xref>). ISG15 exerts multiple effects, involving anti-infectious responses (<xref ref-type="bibr" rid="B19">19</xref>), metabolic reprogramming (<xref ref-type="bibr" rid="B20">20</xref>), and inflammatory responses (<xref ref-type="bibr" rid="B21">21</xref>). BTLA is an inhibitory receptor that suppresses immune responses, and its expression might be associated with poor prognosis in tumors (<xref ref-type="bibr" rid="B22">22</xref>), fulminant viral hepatitis (<xref ref-type="bibr" rid="B23">23</xref>), and sepsis (<xref ref-type="bibr" rid="B24">24</xref>). The pro-inflammatory molecules CSF2RB and ISG15 were positively correlated with kidney injury parameters, while the anti-inflammatory molecule BTLA displayed a negative correlation. Hence, our study shed light on the role of inflammatory factors in DKD. Another finding in our study was elevated antigen processing and presentation in diabetic mice, with both MHC class I and class II upregulated. It has been reported that type 1 diabetes mellitus as an autoimmune disease is associated with certain MHCs (<xref ref-type="bibr" rid="B25">25</xref>). Nevertheless, in metabolic type 2 diabetes mellitus, as in our mouse model, the role of antigen processing and presentation remains largely unclear. The kidney is an organ with an abundant blood supply and thus various leukocytes, and augmented antigen processing and presentation in DKD could be associated with chronic renal inflammation and injury (<xref ref-type="bibr" rid="B26">26</xref>). Further investigations should explore the specific autoantigen in DKD since it is a non-infectious disease, the major activated antigen-presenting cells, and their downstream pathways.</p>
<p>We further explored the therapeutic effect of dapagliflozin on DKD. It has been reported that dapagliflozin as an SGLT2 inhibitor can reduce hyperglycemia and provide cardiovascular and renal benefits (<xref ref-type="bibr" rid="B27">27</xref>). Indeed, dapagliflozin administration in our research improved kidney function and albuminuria in diabetic mice, presenting a potent renoprotective effect. As for the mechanism by which dapagliflozin could protect against DKD, previous studies illustrated its effect on inhibition of HIF-1&#x3b1;-mediated renal tubular cell metabolic disorders (<xref ref-type="bibr" rid="B28">28</xref>), amelioration of renal tubular ferroptosis (<xref ref-type="bibr" rid="B29">29</xref>), and alleviation of complement over-activation (<xref ref-type="bibr" rid="B30">30</xref>). Here, we demonstrated that dapagliflozin attenuated renal inflammation in diabetic mice, downregulating a variety of inflammatory cytokines, including TNF-&#x3b1;, IL-1&#x3b2;, CD30L, IL-3, IL-15, and CXCL13. It has been recognized that chronic microvascular inflammation represents one key pathophysiological feature of diabetes mellitus (<xref ref-type="bibr" rid="B31">31</xref>); our results unraveled several key inflammatory molecules that participate in DKD, and demonstrated that dapagliflozin could attenuate renal inflammation by regulating the expression of multiple inflammatory molecules. Furthermore, in the current study, we focused on the effect of dapagliflozin on alleviating renal inflammation, and previous studies have demonstrated that dapagliflozin downregulated proteins involved in various organs and pathways: regarding metabolic changes, feeding with dapagliflozin suppressed glucagon signaling and reduced hepatic glucose production in rodent diabetic models (<xref ref-type="bibr" rid="B32">32</xref>); as for oxidative stress and cell death, dapagliflozin treatment downregulated hypoxia inducible factor 1&#x3b1; and heme oxygenase 1, thereby ameliorating ferroptosis in mouse DKD (<xref ref-type="bibr" rid="B33">33</xref>); besides, dapagliflozin inhibited fibrotic markers type I collagen, fibronectin, and &#x3b1;-smooth muscle actin in mouse myocardial damage (<xref ref-type="bibr" rid="B34">34</xref>). Overall, the therapeutical benefits of dapagliflozin should be comprehensive, involving multiple organ systems and signaling pathways, and deserve further investigations.</p>
<p>More precisely, to determine which cluster of cells directly responds to dapagliflozin treatment, we performed cell culture of two major cell types, i.e., renal tubular cells as the local intrinsic cells and macrophages as the infiltrated inflammatory cells. In proximal tubular cells, in addition to ISG15, we detected the reduction of TNF-&#x3b2; and IFN-&#x3b3; by dapagliflozin administration. TNF-&#x3b2;, also known as lymphotoxin-&#x3b1;, plays a crucial role in lymphoid organ development, whose receptor has been found on lymphocytes and tubular epithelial cells to participate in renal inflammation and injury (<xref ref-type="bibr" rid="B35">35</xref>, <xref ref-type="bibr" rid="B36">36</xref>). IFN-&#x3b3;, except for its antiviral function, could induce inflammation, oxidative stress, and fibrosis of the kidney (<xref ref-type="bibr" rid="B37">37</xref>, <xref ref-type="bibr" rid="B38">38</xref>). Such findings demonstrated that dapagliflozin successfully ameliorated inflammation and fibrosis caused by high glucose concentration, which was consistent with other researchers (<xref ref-type="bibr" rid="B39">39</xref>). To our surprise, dapagliflozin exerted a potent anti-inflammatory effect on cultured macrophages. It has been reported that dapagliflozin can mediate M2 polarization and modulate NLRP3 inflammasome activity of macrophage <italic>in vivo</italic> to induce cardioprotective and hepatoprotective effects (<xref ref-type="bibr" rid="B40">40</xref>&#x2013;<xref ref-type="bibr" rid="B42">42</xref>). The novelty of our study resides in demonstrating that dapagliflozin can directly effect on macrophages to suppress inflammatory markers independent of glucose concentrations.</p>
<p>Based on our findings that dapagliflozin can attenuate renal inflammation independent of glucose concentrations, we then explored its role in Ctrl mice and I/R-induced CKD mice. We found that dapagliflozin treatment elevated BTLA expression and seemed to reduce ISG15 expression in Ctrl mice. In I/R-induced CKD models, decreased BTLA protein levels and increased ISG15 expression were observed in the diseased kidney. Surprisingly, dapagliflozin rescued kidney function, restored BTLA expression, and alleviated ISG15 upregulation. Of interest, dapagliflozin treatment in normal mice did not lower the blood glucose, while it decreased the blood glucose levels in I/R-induced CKD mice, and the mechanism underlying such a discrepancy deserves exploration. Since mice in the Ctrl and I/R group had no hyperglycemia but involved inflammation, these data further supported our conclusions, and provided new targets for the intervention of CKD using dapagliflozin.</p>
<p>There are several limitations of our study. First, we successfully proved that dapagliflozin could attenuate inflammation in the whole kidney, renal tubular cells, and macrophages, but there are still a group of other cell types in the kidney, such as mesangial cells, podocytes, and interstitial cells. Further investigations could take advantage of single-cell multi-omic technologies to acquire a more precise inflammatory profile of the diseased kidney in DKD with high resolution. In addition, although we proved that both HK-2 cells and RAW 264.7 cells expressed SGLT2, we failed to knock down SGLT2 protein levels utilizing siRNA (<xref ref-type="supplementary-material" rid="SM1"><bold>Supplemental Figure 2</bold></xref>). SGLT2 knockout or knockdown mice or cell lines should be explored in the future to determine whether our observed changes are caused by SGLT2 inhibition or the off-target effect of dapagliflozin. Moreover, we separately explored the direct effect of dapagliflozin on HK-2 cells and RAW 264.7 cells. However, the interactions between renal cells and immune cells play pivotal roles from acute kidney injury to CKD, covering renal inflammation, regeneration, and fibrosis (<xref ref-type="bibr" rid="B43">43</xref>&#x2013;<xref ref-type="bibr" rid="B45">45</xref>). Therefore, a co-culture system of both renal cells and immune cells from the same species could help to illustrate such delicate intercellular crosstalk and the possible effect of dapagliflozin.</p>
<p>In conclusion, our data demonstrate that dapagliflozin attenuates renal inflammation to protect against DKD, and prove that dapagliflozin can directly affect, in a way independent of blood glucose regulation, renal proximal tubular cells and macrophages as an anti-inflammatory agent. Our analysis emphasizes the role of inflammatory factors in the pathogenesis of DKD, and reveals novel therapeutic targets of dapagliflozin treatment. In that sense, this study contributes to the mechanistic understanding of DKD pathophysiology, and provides new insights into the renoprotective effects of dapagliflozin.</p>
</sec>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The data presented in the study are deposited in the GEO repository, accession number GSE246576 for RNAseq data and GSE246763 for ATACseq data.</p>
</sec>
<sec id="s6" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>Ethical approval was not required for the studies on humans in accordance with the local legislation and institutional requirements because only commercially available established cell lines were used. The animal study was approved by The ethics committee of Renji Hospital affiliated to Shanghai Jiao Tong University School of Medicine. The study was conducted in accordance with the local legislation and institutional requirements.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>XC, SM, and LG prepared the concept and designed the study. AC, JS, XY, XS, and XC performed the experiments. AC, JS, and XY analyzed data. AC and JS prepared the figures. AC, JS, and XY drafted the paper. XC, SM, and LG edited and revised the paper. AC, JS, and XY contributed equally to this paper. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>This work was supported in part by grants from the NATCM&#x2019;s Project of High-level Construction of Key TCM Disciplines (zyyzdxk-2023070); &#x201c;PRO&#x2022;Run&#x201d; Fund of the Nephrology Group of CEBM(KYJ202206-0003-8); Shanghai Municipal Planning Commission of Science and Research (No.ZHYY-ZXYJHZX-202014); Science and Technology Commission of Shanghai Municipality (No.20ZR1432600); Shanghai Jiao Tong University (No. YG2022ZD004).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We sincerely thank Xiaotao Chen and Rui Hou of Shanghai Biotechnology Corporation, for their technological support in RNA sequencing and ATAC analysis.</p>
</ack>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fimmu.2023.1205834/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fimmu.2023.1205834/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet_1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
<supplementary-material xlink:href="Table_1.xlsx" id="ST1" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_2.xlsx" id="ST2" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_3.xlsx" id="ST3" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_4.xlsx" id="ST4" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_5.xlsx" id="ST5" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<label>1</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thomas</surname> <given-names>MC</given-names>
</name>
<name>
<surname>Brownlee</surname> <given-names>M</given-names>
</name>
<name>
<surname>Susztak</surname> <given-names>K</given-names>
</name>
<name>
<surname>Sharma</surname> <given-names>K</given-names>
</name>
<name>
<surname>Jandeleit-Dahm</surname> <given-names>KA</given-names>
</name>
<name>
<surname>Zoungas</surname> <given-names>S</given-names>
</name>
<etal/>
</person-group>. <article-title>Diabetic kidney disease</article-title>. <source>Nat Rev Dis Primers.</source> (<year>2015</year>) <volume>1</volume>:<fpage>15018</fpage>. doi: <pub-id pub-id-type="doi">10.1038/nrdp.2015.18</pub-id>
</citation>
</ref>
<ref id="B2">
<label>2</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Alicic</surname> <given-names>RZ</given-names>
</name>
<name>
<surname>Rooney</surname> <given-names>MT</given-names>
</name>
<name>
<surname>Tuttle</surname> <given-names>KR</given-names>
</name>
</person-group>. <article-title>Diabetic kidney disease: challenges, progress, and possibilities</article-title>. <source>Clin J Am Soc Nephrol.</source> (<year>2017</year>) <volume>12</volume>(<issue>12</issue>):<page-range>2032&#x2013;45</page-range>. doi: <pub-id pub-id-type="doi">10.2215/CJN.11491116</pub-id>
</citation>
</ref>
<ref id="B3">
<label>3</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Reidy</surname> <given-names>K</given-names>
</name>
<name>
<surname>Kang</surname> <given-names>HM</given-names>
</name>
<name>
<surname>Hostetter</surname> <given-names>T</given-names>
</name>
<name>
<surname>Susztak</surname> <given-names>K</given-names>
</name>
</person-group>. <article-title>Molecular mechanisms of diabetic kidney disease</article-title>. <source>J Clin Invest.</source> (<year>2014</year>) <volume>124</volume>(<issue>6</issue>):<page-range>2333&#x2013;40</page-range>. doi: <pub-id pub-id-type="doi">10.1172/JCI72271</pub-id>
</citation>
</ref>
<ref id="B4">
<label>4</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tang</surname> <given-names>SCW</given-names>
</name>
<name>
<surname>Yiu</surname> <given-names>WH</given-names>
</name>
</person-group>. <article-title>Innate immunity in diabetic kidney disease</article-title>. <source>Nat Rev Nephrol.</source> (<year>2020</year>) <volume>16</volume>(<issue>4</issue>):<page-range>206&#x2013;22</page-range>. doi: <pub-id pub-id-type="doi">10.1038/s41581-019-0234-4</pub-id>
</citation>
</ref>
<ref id="B5">
<label>5</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Klessens</surname> <given-names>CQF</given-names>
</name>
<name>
<surname>Zandbergen</surname> <given-names>M</given-names>
</name>
<name>
<surname>Wolterbeek</surname> <given-names>R</given-names>
</name>
<name>
<surname>Bruijn</surname> <given-names>JA</given-names>
</name>
<name>
<surname>Rabelink</surname> <given-names>TJ</given-names>
</name>
<name>
<surname>Bajema</surname> <given-names>IM</given-names>
</name>
<etal/>
</person-group>. <article-title>Macrophages in diabetic nephropathy in patients with type 2 diabetes</article-title>. <source>Nephrol Dial Transplant.</source> (<year>2017</year>) <volume>32</volume>(<issue>8</issue>):<page-range>1322&#x2013;9</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/ndt/gfw260</pub-id>
</citation>
</ref>
<ref id="B6">
<label>6</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Vallon</surname> <given-names>V</given-names>
</name>
<name>
<surname>Verma</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>Effects of SGLT2 inhibitors on kidney and cardiovascular function</article-title>. <source>Annu Rev Physiol</source> (<year>2021</year>) <volume>83</volume>:<page-range>503&#x2013;28</page-range>. doi: <pub-id pub-id-type="doi">10.1146/annurev-physiol-031620-095920</pub-id>
</citation>
</ref>
<ref id="B7">
<label>7</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Alicic</surname> <given-names>RZ</given-names>
</name>
<name>
<surname>Johnson</surname> <given-names>EJ</given-names>
</name>
<name>
<surname>Tuttle</surname> <given-names>KR</given-names>
</name>
</person-group>. <article-title>SGLT2 inhibition for the prevention and treatment of diabetic kidney disease: A review</article-title>. <source>Am J Kidney Dis</source> (<year>2018</year>) <volume>72</volume>(<issue>2</issue>):<page-range>267&#x2013;77</page-range>. doi: <pub-id pub-id-type="doi">10.1053/j.ajkd.2018.03.022</pub-id>
</citation>
</ref>
<ref id="B8">
<label>8</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Heerspink</surname> <given-names>HJL</given-names>
</name>
<name>
<surname>Stef&#xe1;nsson</surname> <given-names>BV</given-names>
</name>
<name>
<surname>Correa-Rotter</surname> <given-names>R</given-names>
</name>
<name>
<surname>Chertow</surname> <given-names>GM</given-names>
</name>
<name>
<surname>Greene</surname> <given-names>T</given-names>
</name>
<name>
<surname>Hou</surname> <given-names>FF</given-names>
</name>
<etal/>
</person-group>. <article-title>Dapagliflozin in patients with chronic kidney disease</article-title>. <source>N Engl J Med</source> (<year>2020</year>) <volume>383</volume>(<issue>15</issue>):<page-range>1436&#x2013;46</page-range>. doi: <pub-id pub-id-type="doi">10.1056/NEJMoa2024816</pub-id>
</citation>
</ref>
<ref id="B9">
<label>9</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chertow</surname> <given-names>GM</given-names>
</name>
<name>
<surname>Vart</surname> <given-names>P</given-names>
</name>
<name>
<surname>Jongs</surname> <given-names>N</given-names>
</name>
<name>
<surname>Toto</surname> <given-names>RD</given-names>
</name>
<name>
<surname>Gorriz</surname> <given-names>JL</given-names>
</name>
<name>
<surname>Hou</surname> <given-names>FF</given-names>
</name>
<etal/>
</person-group>. <article-title>Effects of dapagliflozin in stage 4 chronic kidney disease</article-title>. <source>J Am Soc Nephrol.</source> (<year>2021</year>) <volume>32</volume>(<issue>9</issue>):<page-range>2352&#x2013;61</page-range>. doi: <pub-id pub-id-type="doi">10.1681/ASN.2021020167</pub-id>
</citation>
</ref>
<ref id="B10">
<label>10</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wheeler</surname> <given-names>DC</given-names>
</name>
<name>
<surname>Stef&#xe1;nsson</surname> <given-names>BV</given-names>
</name>
<name>
<surname>Jongs</surname> <given-names>N</given-names>
</name>
<name>
<surname>Chertow</surname> <given-names>GM</given-names>
</name>
<name>
<surname>Greene</surname> <given-names>T</given-names>
</name>
<name>
<surname>Hou</surname> <given-names>FF</given-names>
</name>
<etal/>
</person-group>. <article-title>Effects of dapagliflozin on major adverse kidney and cardiovascular events in patients with diabetic and non-diabetic chronic kidney disease: a prespecified analysis from the DAPA-CKD trial</article-title>. <source>Lancet Diabetes Endocrinol</source> (<year>2021</year>) <volume>9</volume>(<issue>1</issue>):<fpage>22</fpage>&#x2013;<lpage>31</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S2213-8587(20)30369-7</pub-id>
</citation>
</ref>
<ref id="B11">
<label>11</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saeed</surname> <given-names>AI</given-names>
</name>
<name>
<surname>Sharov</surname> <given-names>V</given-names>
</name>
<name>
<surname>White</surname> <given-names>J</given-names>
</name>
<name>
<surname>Li</surname> <given-names>J</given-names>
</name>
<name>
<surname>Liang</surname> <given-names>W</given-names>
</name>
<name>
<surname>Bhagabati</surname> <given-names>N</given-names>
</name>
<etal/>
</person-group>. <article-title>TM4: a free, open-source system for microarray data management and analysis</article-title>. <source>Biotechniques</source> (<year>2003</year>) <volume>34</volume>(<issue>2</issue>):<page-range>374&#x2013;8</page-range>. doi: <pub-id pub-id-type="doi">10.2144/03342mt01</pub-id>
</citation>
</ref>
<ref id="B12">
<label>12</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sato</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Oguchi</surname> <given-names>A</given-names>
</name>
<name>
<surname>Fukushima</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Masuda</surname> <given-names>K</given-names>
</name>
<name>
<surname>Toriu</surname> <given-names>N</given-names>
</name>
<name>
<surname>Taniguchi</surname> <given-names>K</given-names>
</name>
<etal/>
</person-group>. <article-title>CD153/CD30 signaling promotes age-dependent tertiary lymphoid tissue expansion and kidney injury</article-title>. <source>J Clin Invest</source> (<year>2022</year>) <volume>132</volume>(<issue>2</issue>):<elocation-id>e146071</elocation-id>. doi: <pub-id pub-id-type="doi">10.1172/JCI146071</pub-id>
</citation>
</ref>
<ref id="B13">
<label>13</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dougan</surname> <given-names>M</given-names>
</name>
<name>
<surname>Dranoff</surname> <given-names>G</given-names>
</name>
<name>
<surname>Dougan</surname> <given-names>SK</given-names>
</name>
</person-group>. <article-title>GM-CSF, IL-3, and IL-5 family of cytokines: regulators of inflammation</article-title>. <source>Immunity</source> (<year>2019</year>) <volume>50</volume>(<issue>4</issue>):<fpage>796</fpage>&#x2013;<lpage>811</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2019.03.022</pub-id>
</citation>
</ref>
<ref id="B14">
<label>14</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Patidar</surname> <given-names>M</given-names>
</name>
<name>
<surname>Yadav</surname> <given-names>N</given-names>
</name>
<name>
<surname>Dalai</surname> <given-names>SK</given-names>
</name>
</person-group>. <article-title>Interleukin 15: A key cytokine for immunotherapy</article-title>. <source>Cytokine Growth Factor Rev</source> (<year>2016</year>) <volume>31</volume>:<fpage>49</fpage>&#x2013;<lpage>59</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.cytogfr.2016.06.001</pub-id>
</citation>
</ref>
<ref id="B15">
<label>15</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Liu</surname> <given-names>S</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>X</given-names>
</name>
<name>
<surname>Xiong</surname> <given-names>H</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>W</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Yin</surname> <given-names>L</given-names>
</name>
<etal/>
</person-group>. <article-title>CXCL13/CXCR5 signaling contributes to diabetes-induced tactile allodynia via activating pERK, pSTAT3, pAKT pathways and pro-inflammatory cytokines production in the spinal cord of male mice</article-title>. <source>Brain Behav Immun</source> (<year>2019</year>) <volume>80</volume>:<page-range>711&#x2013;24</page-range>. doi: <pub-id pub-id-type="doi">10.1016/j.bbi.2019.05.020</pub-id>
</citation>
</ref>
<ref id="B16">
<label>16</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname> <given-names>J</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>H</given-names>
</name>
<name>
<surname>Takagi</surname> <given-names>S</given-names>
</name>
<name>
<surname>Nitta</surname> <given-names>K</given-names>
</name>
<name>
<surname>Kitada</surname> <given-names>M</given-names>
</name>
<name>
<surname>Srivastava</surname> <given-names>SP</given-names>
</name>
<etal/>
</person-group>. <article-title>Renal protective effects of empagliflozin via inhibition of EMT and aberrant glycolysis in proximal tubules</article-title>. <source>JCI Insight</source> (<year>2020</year>) <volume>5</volume>(<issue>6</issue>):<elocation-id>e129034</elocation-id>. doi: <pub-id pub-id-type="doi">10.1172/jci.insight.129034</pub-id>
</citation>
</ref>
<ref id="B17">
<label>17</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>LX</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>SX</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>HJ</given-names>
</name>
<name>
<surname>Rong</surname> <given-names>XL</given-names>
</name>
<name>
<surname>Guo</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>M2b macrophage polarization and its roles in diseases</article-title>. <source>J Leukoc Biol</source> (<year>2019</year>) <volume>106</volume>(<issue>2</issue>):<page-range>345&#x2013;58</page-range>. doi: <pub-id pub-id-type="doi">10.1002/JLB.3RU1018-378RR</pub-id>
</citation>
</ref>
<ref id="B18">
<label>18</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Croxford</surname> <given-names>AL</given-names>
</name>
<name>
<surname>Lanzinger</surname> <given-names>M</given-names>
</name>
<name>
<surname>Hartmann</surname> <given-names>FJ</given-names>
</name>
<name>
<surname>Schreiner</surname> <given-names>B</given-names>
</name>
<name>
<surname>Mair</surname> <given-names>F</given-names>
</name>
<name>
<surname>Pelczar</surname> <given-names>P</given-names>
</name>
<etal/>
</person-group>. <article-title>The cytokine GM-CSF drives the inflammatory signature of CCR2+ Monocytes and licenses autoimmunity</article-title>. <source>Immunity</source> (<year>2015</year>) <volume>43</volume>(<issue>3</issue>):<page-range>502&#x2013;14</page-range>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2015.08.010</pub-id>
</citation>
</ref>
<ref id="B19">
<label>19</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bogunovic</surname> <given-names>D</given-names>
</name>
<name>
<surname>Byun</surname> <given-names>M</given-names>
</name>
<name>
<surname>Durfee</surname> <given-names>LA</given-names>
</name>
<name>
<surname>Abhyankar</surname> <given-names>A</given-names>
</name>
<name>
<surname>Sanal</surname> <given-names>O</given-names>
</name>
<name>
<surname>Mansouri</surname> <given-names>D</given-names>
</name>
<etal/>
</person-group>. <article-title>Mycobacterial disease and impaired IFN-&#x3b3; immunity in humans with inherited ISG15 deficiency</article-title>. <source>Science</source> (<year>2012</year>) <volume>337</volume>(<issue>6102</issue>):<page-range>1684&#x2013;8</page-range>. doi: <pub-id pub-id-type="doi">10.1126/science.1224026</pub-id>
</citation>
</ref>
<ref id="B20">
<label>20</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yan</surname> <given-names>S</given-names>
</name>
<name>
<surname>Kumari</surname> <given-names>M</given-names>
</name>
<name>
<surname>Xiao</surname> <given-names>H</given-names>
</name>
<name>
<surname>Jacobs</surname> <given-names>C</given-names>
</name>
<name>
<surname>Kochumon</surname> <given-names>S</given-names>
</name>
<name>
<surname>Jedrychowski</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>IRF3 reduces adipose thermogenesis via ISG15-mediated reprogramming of glycolysis</article-title>. <source>J Clin Invest</source> (<year>2021</year>) <volume>131</volume>(<issue>7</issue>):<elocation-id>e144888</elocation-id>. doi: <pub-id pub-id-type="doi">10.1172/JCI144888</pub-id>
</citation>
</ref>
<ref id="B21">
<label>21</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fan</surname> <given-names>JB</given-names>
</name>
<name>
<surname>Miyauchi-Ishida</surname> <given-names>S</given-names>
</name>
<name>
<surname>Arimoto</surname> <given-names>K</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>D</given-names>
</name>
<name>
<surname>Yan</surname> <given-names>M</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>CW</given-names>
</name>
<etal/>
</person-group>. <article-title>Type I IFN induces protein ISGylation to enhance cytokine expression and augments colonic inflammation</article-title>. <source>Proc Natl Acad Sci U S A.</source> (<year>2015</year>) <volume>112</volume>(<issue>46</issue>):<page-range>14313&#x2013;8</page-range>. doi: <pub-id pub-id-type="doi">10.1073/pnas.1505690112</pub-id>
</citation>
</ref>
<ref id="B22">
<label>22</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yang</surname> <given-names>M</given-names>
</name>
<name>
<surname>Lin</surname> <given-names>C</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>K</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>H</given-names>
</name>
<name>
<surname>Li</surname> <given-names>W</given-names>
</name>
</person-group>. <article-title>Identification of a cytokine-dominated immunosuppressive class in squamous cell lung carcinoma with implications for immunotherapy resistance</article-title>. <source>Genome Med</source> (<year>2022</year>) <volume>14</volume>(<issue>1</issue>):<fpage>72</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s13073-022-01079-x</pub-id>
</citation>
</ref>
<ref id="B23">
<label>23</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yang</surname> <given-names>C</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Guo</surname> <given-names>G</given-names>
</name>
<name>
<surname>Li</surname> <given-names>H</given-names>
</name>
<name>
<surname>Cao</surname> <given-names>D</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>H</given-names>
</name>
<etal/>
</person-group>. <article-title>Expression of B and T lymphocyte attenuator (BTLA) in macrophages contributes to the fulminant hepatitis caused by murine hepatitis virus strain-3</article-title>. <source>Gut</source> (<year>2013</year>) <volume>62</volume>(<issue>8</issue>):<page-range>1204&#x2013;13</page-range>. doi: <pub-id pub-id-type="doi">10.1136/gutjnl-2012-302239</pub-id>
</citation>
</ref>
<ref id="B24">
<label>24</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hutchins</surname> <given-names>NA</given-names>
</name>
<name>
<surname>Unsinger</surname> <given-names>J</given-names>
</name>
<name>
<surname>Hotchkiss</surname> <given-names>RS</given-names>
</name>
<name>
<surname>Ayala</surname> <given-names>A</given-names>
</name>
</person-group>. <article-title>The new normal: immunomodulatory agents against sepsis immune suppression</article-title>. <source>Trends Mol Med</source> (<year>2014</year>) <volume>20</volume>(<issue>4</issue>):<page-range>224&#x2013;33</page-range>. doi: <pub-id pub-id-type="doi">10.1016/j.molmed.2014.01.002</pub-id>
</citation>
</ref>
<ref id="B25">
<label>25</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pociot</surname> <given-names>F</given-names>
</name>
<name>
<surname>Lernmark</surname> <given-names>&#xc5;</given-names>
</name>
</person-group>. <article-title>Genetic risk factors for type 1 diabetes</article-title>. <source>Lancet</source> (<year>2016</year>) <volume>387</volume>(<issue>10035</issue>):<page-range>2331&#x2013;9</page-range>. doi: <pub-id pub-id-type="doi">10.1016/S0140-6736(16)30582-7</pub-id>
</citation>
</ref>
<ref id="B26">
<label>26</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kitching</surname> <given-names>AR</given-names>
</name>
<name>
<surname>Hickey</surname> <given-names>MJ</given-names>
</name>
</person-group>. <article-title>Immune cell behaviour and dynamics in the kidney - insights from in <italic>vivo</italic> imaging</article-title>. <source>Nat Rev Nephrol.</source> (<year>2022</year>) <volume>18</volume>(<issue>1</issue>):<fpage>22</fpage>&#x2013;<lpage>37</lpage>. doi: <pub-id pub-id-type="doi">10.1038/s41581-021-00481-9</pub-id>
</citation>
</ref>
<ref id="B27">
<label>27</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname> <given-names>B</given-names>
</name>
<name>
<surname>Li</surname> <given-names>S</given-names>
</name>
<name>
<surname>Kang</surname> <given-names>B</given-names>
</name>
<name>
<surname>Zhou</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>The current role of sodium-glucose cotransporter 2 inhibitors in type 2 diabetes mellitus management</article-title>. <source>Cardiovasc Diabetol</source> (<year>2022</year>) <volume>21</volume>(<issue>1</issue>):<fpage>83</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s12933-022-01512-w</pub-id>
</citation>
</ref>
<ref id="B28">
<label>28</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cai</surname> <given-names>T</given-names>
</name>
<name>
<surname>Ke</surname> <given-names>Q</given-names>
</name>
<name>
<surname>Fang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Wen</surname> <given-names>P</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>H</given-names>
</name>
<name>
<surname>Yuan</surname> <given-names>Q</given-names>
</name>
<etal/>
</person-group>. <article-title>Sodium-glucose cotransporter 2 inhibition suppresses HIF-1&#x3b1;-mediated metabolic switch from lipid oxidation to glycolysis in kidney tubule cells of diabetic mice</article-title>. <source>Cell Death Dis</source> (<year>2020</year>) <volume>11</volume>(<issue>5</issue>):<fpage>390</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41419-020-2544-7</pub-id>
</citation>
</ref>
<ref id="B29">
<label>29</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Huang</surname> <given-names>B</given-names>
</name>
<name>
<surname>Wen</surname> <given-names>W</given-names>
</name>
<name>
<surname>Ye</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>Dapagliflozin ameliorates renal tubular ferroptosis in diabetes via SLC40A1 stabilization</article-title>. <source>Oxid Med Cell Longev</source> (<year>2022</year>) <volume>2022</volume>:<fpage>9735555</fpage>. doi: <pub-id pub-id-type="doi">10.1155/2022/9735555</pub-id>
</citation>
</ref>
<ref id="B30">
<label>30</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chang</surname> <given-names>DY</given-names>
</name>
<name>
<surname>Li</surname> <given-names>XQ</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>M</given-names>
</name>
<name>
<surname>Zhao</surname> <given-names>MH</given-names>
</name>
</person-group>. <article-title>Dapagliflozin Ameliorates Diabetic Kidney Disease via Upregulating Crry and Alleviating Complement Over-activation in db/db Mice</article-title>. <source>Front Pharmacol</source> (<year>2021</year>) <volume>12</volume>:<elocation-id>729334</elocation-id>. doi: <pub-id pub-id-type="doi">10.3389/fphar.2021.729334</pub-id>
</citation>
</ref>
<ref id="B31">
<label>31</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Forbes</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Cooper</surname> <given-names>ME</given-names>
</name>
</person-group>. <article-title>Mechanisms of diabetic complications</article-title>. <source>Physiol Rev</source> (<year>2013</year>) <volume>93</volume>(<issue>1</issue>):<page-range>137&#x2013;88</page-range>. doi: <pub-id pub-id-type="doi">10.1152/physrev.00045.2011</pub-id>
</citation>
</ref>
<ref id="B32">
<label>32</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>MY</given-names>
</name>
<name>
<surname>Yu</surname> <given-names>X</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>Y</given-names>
</name>
<name>
<surname>McCorkle</surname> <given-names>SK</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>S</given-names>
</name>
<name>
<surname>Li</surname> <given-names>J</given-names>
</name>
<etal/>
</person-group>. <article-title>Dapagliflozin suppresses glucagon signaling in rodent models of diabetes</article-title>. <source>Proc Natl Acad Sci U S A.</source> (<year>2017</year>) <volume>114</volume>(<issue>25</issue>):<page-range>6611&#x2013;6</page-range>. doi: <pub-id pub-id-type="doi">10.1073/pnas.1705845114</pub-id>
</citation>
</ref>
<ref id="B33">
<label>33</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>YH</given-names>
</name>
<name>
<surname>Chang</surname> <given-names>DY</given-names>
</name>
<name>
<surname>Zhao</surname> <given-names>MH</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Dapagliflozin alleviates diabetic kidney disease via hypoxia inducible factor 1&#x3b1;/heme oxygenase 1-mediated ferroptosis</article-title>. <source>Antioxid Redox Signal</source> (<year>2023</year>). doi: <pub-id pub-id-type="doi">10.1089/ars.2022.0169</pub-id>. Online ahead of print.</citation>
</ref>
<ref id="B34">
<label>34</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hsieh</surname> <given-names>PL</given-names>
</name>
<name>
<surname>Chu</surname> <given-names>PM</given-names>
</name>
<name>
<surname>Cheng</surname> <given-names>HC</given-names>
</name>
<name>
<surname>Huang</surname> <given-names>YT</given-names>
</name>
<name>
<surname>Chou</surname> <given-names>WC</given-names>
</name>
<name>
<surname>Tsai</surname> <given-names>KL</given-names>
</name>
<etal/>
</person-group>. <article-title>Dapagliflozin mitigates doxorubicin-caused myocardium damage by regulating AKT-mediated oxidative stress, cardiac remodeling, and inflammation</article-title>. <source>Int J Mol Sci</source> (<year>2022</year>) <volume>23</volume>(<issue>17</issue>):<fpage>10146</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ijms231710146</pub-id>
</citation>
</ref>
<ref id="B35">
<label>35</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ruddle</surname> <given-names>NH</given-names>
</name>
</person-group>. <article-title>Lymphotoxin and TNF: how it all began-a tribute to the travelers</article-title>. <source>Cytokine Growth Factor Rev</source> (<year>2014</year>) <volume>25</volume>(<issue>2</issue>):<page-range>83&#x2013;9</page-range>. doi: <pub-id pub-id-type="doi">10.1016/j.cytogfr.2014.02.001</pub-id>
</citation>
</ref>
<ref id="B36">
<label>36</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Seleznik</surname> <given-names>G</given-names>
</name>
<name>
<surname>Seeger</surname> <given-names>H</given-names>
</name>
<name>
<surname>Bauer</surname> <given-names>J</given-names>
</name>
<name>
<surname>Fu</surname> <given-names>K</given-names>
</name>
<name>
<surname>Czerkowicz</surname> <given-names>J</given-names>
</name>
<name>
<surname>Papandile</surname> <given-names>A</given-names>
</name>
<etal/>
</person-group>. <article-title>The lymphotoxin &#x3b2; receptor is a potential therapeutic target in renal inflammation</article-title>. <source>Kidney Int</source> (<year>2016</year>) <volume>89</volume>(<issue>1</issue>):<page-range>113&#x2013;26</page-range>. doi: <pub-id pub-id-type="doi">10.1038/ki.2015.280</pub-id>
</citation>
</ref>
<ref id="B37">
<label>37</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname> <given-names>MG</given-names>
</name>
<name>
<surname>Yun</surname> <given-names>D</given-names>
</name>
<name>
<surname>Kang</surname> <given-names>CL</given-names>
</name>
<name>
<surname>Hong</surname> <given-names>M</given-names>
</name>
<name>
<surname>Hwang</surname> <given-names>J</given-names>
</name>
<name>
<surname>Moon</surname> <given-names>KC</given-names>
</name>
<etal/>
</person-group>. <article-title>Kidney VISTA prevents IFN-&#x3b3;/IL-9 axis-mediated tubulointerstitial fibrosis after acute glomerular injury</article-title>. <source>J Clin Invest</source> (<year>2022</year>) <volume>132</volume>(<issue>1</issue>):<elocation-id>e151189</elocation-id>. doi: <pub-id pub-id-type="doi">10.1172/JCI151189</pub-id>
</citation>
</ref>
<ref id="B38">
<label>38</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pan</surname> <given-names>XX</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>F</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>XH</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>DR</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>HJ</given-names>
</name>
<name>
<surname>Kong</surname> <given-names>LR</given-names>
</name>
<etal/>
</person-group>. <article-title>T-cell senescence accelerates angiotensin II-induced target organ damage</article-title>. <source>Cardiovasc Res</source> (<year>2021</year>) <volume>117</volume>(<issue>1</issue>):<page-range>271&#x2013;83</page-range>. doi: <pub-id pub-id-type="doi">10.1093/cvr/cvaa032</pub-id>
</citation>
</ref>
<ref id="B39">
<label>39</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Brown</surname> <given-names>E</given-names>
</name>
<name>
<surname>Rajeev</surname> <given-names>SP</given-names>
</name>
<name>
<surname>Cuthbertson</surname> <given-names>DJ</given-names>
</name>
<name>
<surname>Wilding</surname> <given-names>JPH</given-names>
</name>
</person-group>. <article-title>A review of the mechanism of action, metabolic profile and haemodynamic effects of sodium-glucose co-transporter-2 inhibitors</article-title>. <source>Diabetes Obes Metab</source> (<year>2019</year>) <volume>21 Suppl 2</volume>:<fpage>9</fpage>&#x2013;<lpage>18</lpage>. doi: <pub-id pub-id-type="doi">10.1111/dom.13650</pub-id>
</citation>
</ref>
<ref id="B40">
<label>40</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname> <given-names>SR</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>SG</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>SH</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>JH</given-names>
</name>
<name>
<surname>Choi</surname> <given-names>E</given-names>
</name>
<name>
<surname>Cho</surname> <given-names>W</given-names>
</name>
<etal/>
</person-group>. <article-title>SGLT2 inhibition modulates NLRP3 inflammasome activity via ketones and insulin in diabetes with cardiovascular disease</article-title>. <source>Nat Commun</source> (<year>2020</year>) <volume>11</volume>(<issue>1</issue>):<fpage>2127</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41467-020-15983-6</pub-id>
</citation>
</ref>
<ref id="B41">
<label>41</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Nagata</surname> <given-names>N</given-names>
</name>
<name>
<surname>Nagashimada</surname> <given-names>M</given-names>
</name>
<name>
<surname>Zhuge</surname> <given-names>F</given-names>
</name>
<name>
<surname>Ni</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>G</given-names>
</name>
<etal/>
</person-group>. <article-title>SGLT2 inhibition by empagliflozin promotes fat utilization and browning and attenuates inflammation and insulin resistance by polarizing M2 macrophages in diet-induced obese mice</article-title>. <source>EBioMedicine</source> (<year>2017</year>) <volume>20</volume>:<page-range>137&#x2013;49</page-range>. doi: <pub-id pub-id-type="doi">10.1016/j.ebiom.2017.05.028</pub-id>
</citation>
</ref>
<ref id="B42">
<label>42</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lee</surname> <given-names>TM</given-names>
</name>
<name>
<surname>Chang</surname> <given-names>NC</given-names>
</name>
<name>
<surname>Lin</surname> <given-names>SZ</given-names>
</name>
</person-group>. <article-title>Dapagliflozin, a selective SGLT2 Inhibitor, attenuated cardiac fibrosis by regulating the macrophage polarization via STAT3 signaling in infarcted rat hearts</article-title>. <source>Free Radic Biol Med</source> (<year>2017</year>) <volume>104</volume>:<fpage>298</fpage>&#x2013;<lpage>310</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.freeradbiomed.2017.01.035</pub-id>
</citation>
</ref>
<ref id="B43">
<label>43</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chung</surname> <given-names>KW</given-names>
</name>
<name>
<surname>Dhillon</surname> <given-names>P</given-names>
</name>
<name>
<surname>Huang</surname> <given-names>S</given-names>
</name>
<name>
<surname>Sheng</surname> <given-names>X</given-names>
</name>
<name>
<surname>Shrestha</surname> <given-names>R</given-names>
</name>
<name>
<surname>Qiu</surname> <given-names>C</given-names>
</name>
<etal/>
</person-group>. <article-title>Mitochondrial damage and activation of the STING pathway lead to renal inflammation and fibrosis</article-title>. <source>Cell Metab</source> (<year>2019</year>) <volume>30</volume>(<issue>4</issue>):<fpage>784</fpage>&#x2013;<lpage>99.e5</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.cmet.2019.08.003</pub-id>
</citation>
</ref>
<ref id="B44">
<label>44</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shin</surname> <given-names>NS</given-names>
</name>
<name>
<surname>Marlier</surname> <given-names>A</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Doilicho</surname> <given-names>N</given-names>
</name>
<name>
<surname>Linberg</surname> <given-names>D</given-names>
</name>
<name>
<surname>Guo</surname> <given-names>J</given-names>
</name>
<etal/>
</person-group>. <article-title>Arginase-1 is required for macrophage-mediated renal tubule regeneration</article-title>. <source>J Am Soc Nephrol.</source> (<year>2022</year>) <volume>33</volume>(<issue>6</issue>):<page-range>1077&#x2013;86</page-range>. doi: <pub-id pub-id-type="doi">10.1681/ASN.2021121548</pub-id>
</citation>
</ref>
<ref id="B45">
<label>45</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Guo</surname> <given-names>J</given-names>
</name>
<name>
<surname>Moledina</surname> <given-names>DG</given-names>
</name>
<name>
<surname>Cantley</surname> <given-names>LG</given-names>
</name>
</person-group>. <article-title>Immune-mediated tubule atrophy promotes acute kidney injury to chronic kidney disease transition</article-title>. <source>Nat Commun</source> (<year>2022</year>) <volume>13</volume>(<issue>1</issue>):<fpage>4892</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41467-022-32634-0</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>
