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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2020.01387</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The NF-&#x003BA;B Signaling Pathway, the Microbiota, and Gastrointestinal Tumorigenesis: Recent Advances</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Peng</surname> <given-names>Chao</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/544677/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Ouyang</surname> <given-names>Yaobin</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/963049/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Lu</surname> <given-names>Nonghua</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/288366/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Li</surname> <given-names>Nianshuang</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/268937/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Gastroenterology, The First Affiliated Hospital of Nanchang University</institution>, <addr-line>Nanchang</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>Institute of Digestive Disease, The First Affiliated Hospital of Nanchang University</institution>, <addr-line>Nanchang</addr-line>, <country>China</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Paul Laszlo Bollyky, Stanford University, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Shuji Ogino, Dana&#x02013;Farber Cancer Institute, United States; Emma Allen-Vercoe, University of Guelph, Canada</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Nianshuang Li <email>zyyalns&#x00040;126.com</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Microbial Immunology, a section of the journal Frontiers in Immunology</p></fn>
<fn fn-type="other" id="fn002"><p>&#x02020;These authors have contributed equally to this work</p></fn></author-notes>
<pub-date pub-type="epub">
<day>30</day>
<month>06</month>
<year>2020</year>
</pub-date>
<pub-date pub-type="collection">
<year>2020</year>
</pub-date>
<volume>11</volume>
<elocation-id>1387</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>03</month>
<year>2020</year>
</date>
<date date-type="accepted">
<day>29</day>
<month>05</month>
<year>2020</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2020 Peng, Ouyang, Lu and Li.</copyright-statement>
<copyright-year>2020</copyright-year>
<copyright-holder>Peng, Ouyang, Lu and Li</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p>Gastrointestinal (GI) cancers, especially gastric cancer and colorectal cancer (CRC), represent a major global health burden. A large population of microorganisms residing in the GI tract regulate physiological processes, such as the immune response, metabolic balance, and homeostasis. Accumulating evidence has revealed the alteration of microbial communities in GI tumorigenesis. Experimental studies in cell lines and animal models showed the functional roles and molecular mechanisms of several bacteria in GI cancers, including <italic>Helicobacter pylori</italic> in gastric cancer as well as <italic>Fusobacterium nucleatum, Escherichia coli, Peptostreptococcus anaerobius</italic>, and <italic>Bacteroides fragilis</italic> in CRC. The transcriptional factor NF-&#x003BA;B plays a crucial role in the host response to microbial infection through orchestrating innate and adaptive immune functions. Moreover, NF-&#x003BA;B activity is linked to GI cancer initiation and development through its induction of chronic inflammation, cellular transformation and proliferation. Here, we provide an overview and discussion of modulation of the NF-&#x003BA;B signaling pathway by microbiota, especially infectious bacteria, in GI tumorigenesis, with a major focus on gastric cancer and CRC.</p></abstract>
<kwd-group>
<kwd>NF-&#x003BA;B signaling pathway</kwd>
<kwd><italic>Helicobacter pylori</italic></kwd>
<kwd>microbiota</kwd>
<kwd>gastric cancer</kwd>
<kwd>colorectal cancer</kwd>
</kwd-group>
<contract-num rid="cn001">81670507</contract-num>
<contract-num rid="cn001">81870395</contract-num>
<contract-num rid="cn001">81900500</contract-num>
<contract-num rid="cn002">20192BAB215006</contract-num>
<contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content></contract-sponsor>
<contract-sponsor id="cn002">Jiangxi Provincial Department of Science and Technology<named-content content-type="fundref-id">10.13039/501100010857</named-content></contract-sponsor>
<counts>
<fig-count count="3"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="128"/>
<page-count count="13"/>
<word-count count="9910"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Cancer is the second leading cause of death globally behind cardiovascular disease, according to statistical data from the World Health Organization (<xref ref-type="bibr" rid="B1">1</xref>). Gastrointestinal carcinoma remains the main cause of cancer-related morbidity and mortality worldwide, particularly in East Asian countries (<xref ref-type="bibr" rid="B2">2</xref>). The roles of genetic risk factors in cancer development have been well-studied. Germline mutation in CDH1 (E-cadherin) is widely detected in gastric cancer (<xref ref-type="bibr" rid="B3">3</xref>). The genetic mutation of adenomatous polyposis coli (APC) is associated with a higher risk of familial adenomatous polyposis and colorectal cancer (<xref ref-type="bibr" rid="B4">4</xref>). In addition, abundant and diverse microbes reside in the human body. These microorganisms include bacteria, fungi, archaea, and viruses. Approximately 100 trillion of microorganisms exist in the human gastrointestinal tract (<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B6">6</xref>). The activities of complex microbial communities orchestrate many aspects of human health, such as immune responses, metabolic balance, and homeostasis. Recently, accumulating evidence suggests that disruption of the microbiota is involved in diverse human diseases, including gastrointestinal disorders, obesity, inflammatory bowel disease (IBD), and depression (<xref ref-type="bibr" rid="B7">7</xref>, <xref ref-type="bibr" rid="B8">8</xref>). Data at different levels from animal models and cell lines indicate that microbial pathogens exert oncogenic properties during gastrointestinal tumorigenesis (<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B10">10</xref>). It has been well-established that infection with the gram-negative bacterium <italic>Helicobacter pylori</italic> (<italic>H. pylori</italic>) significantly increases the risk of gastric cancer. The presence of <italic>Fusobacterium nucleatum</italic> (<italic>F. nucleatum</italic>), a gram-negative obligate anaerobic bacterium, can contribute to intestinal tumorigenesis (<xref ref-type="bibr" rid="B11">11</xref>). The NF-&#x003BA;B signaling pathway can be activated to modulate host cellular events after exposure to different microbial pathogens or microbial products, such as lipopolysaccharide (LPS) and pathogen-associated molecular patterns (PAMPs) (<xref ref-type="bibr" rid="B12">12</xref>). Cytoplasmic NF-&#x003BA;B is transferred to the nucleus, where it induces antimicrobial inflammatory cytokine expression, which functions as a rapid defense mechanism against microbes, including infectious bacteria. However, prolonged chronic inflammation due to the activation of NF-&#x003BA;B proteins may result in tissue damage, further contributing to tumorigenesis by changing the genetic and epigenetic states of damaged tissues and the host microenvironment (<xref ref-type="bibr" rid="B13">13</xref>). In this review, we provide an update on recent advances in our understanding of the modulation of the NF-&#x003BA;B signaling pathway by microbes, particularly infectious bacteria in gastrointestinal tumorigenesis, with a major focus on stomach and intestinal cancers.</p>
</sec>
<sec id="s2">
<title>Signal Transduction of the NF-&#x003BA;B Pathway</title>
<sec>
<title>Activation of NF-&#x003BA;B Signaling</title>
<p>The NF-&#x003BA;B family of transcriptional factors regulates a large number of genes involved in different cellular processes, such as cell proliferation, differentiation, genome stability, and the innate immune and adaptive immune responses (<xref ref-type="bibr" rid="B14">14</xref>). The NF-&#x003BA;B family consists of five members that interact with each other to homodimerize or heterodimerize: NF-&#x003BA;B1 (also named p50), NF-&#x003BA;B1 (also named p52), RelA (also named p65), RelB, and c-Rel (<xref ref-type="bibr" rid="B15">15</xref>). Activation of the NF-&#x003BA;B signaling pathway can occur through canonical and non-canonical (or alternative) pathways (<xref ref-type="bibr" rid="B16">16</xref>). The IKK kinase complex, including the catalytic subunits IKK&#x003B1;, IKK&#x003B2;, and a regulatory subunit NF-&#x003BA;B essential modulator (NEMO), is the core component of the NF-&#x003BA;B signaling cascade (<xref ref-type="bibr" rid="B17">17</xref>). Under normal physiological conditions, NF-&#x003BA;B dimers in an inactive form are sequestered to the cytoplasm through their interaction with IKB-inhibitory proteins (I&#x003BA;B&#x003B1;, I&#x003BA;B&#x003B2;, and I&#x003BA;B&#x003B5;). Upon stimulation with diverse bacteria, various immune receptors, such as Toll-like receptors (TLRs) and TNF receptors (TNFRs), can be activated to mediate the NF-&#x003BA;B signaling pathway. The primary mechanism of canonical NF-&#x003BA;B activation is the degradation of I&#x003BA;B&#x003B1;. In this process, IKK phosphorylates I&#x003BA;B&#x003B1; and leads to its ubiquitination through the SCF<sup>&#x003B2;TrCP</sup> ligase-dependent proteasome degradation machinery. As a result, NF-&#x003BA;B is released and translocated from the cytoplasm to the nucleus, where it binds DNA and regulates downstream gene transcription (<xref ref-type="bibr" rid="B18">18</xref>&#x02013;<xref ref-type="bibr" rid="B20">20</xref>). The alternative NF-&#x003BA;B signaling is mainly dependent on the activation of NF-&#x003BA;B2 (p100)/ RelB complex, which specifically responds to a subset of receptors, including BAFF (B-cell activating factor belonging to TNF family) receptor (BAFFR), CD40, and receptor activator for NF-&#x003BA;B (RANK) (<xref ref-type="bibr" rid="B21">21</xref>). NF-&#x003BA;B-inducing kinase (NIK) is a core component of the non-canonical pathway. Ikk&#x003B1; is activated by NIK and then phosphorylates p100 (<xref ref-type="bibr" rid="B22">22</xref>). Then, p100 is processed to its active form, p52, which forms a heterodimer with RelB that translates to the nucleus (<xref ref-type="bibr" rid="B21">21</xref>, <xref ref-type="bibr" rid="B23">23</xref>&#x02013;<xref ref-type="bibr" rid="B25">25</xref>). Both the canonical and non-canonical pathways can be mediated to orchestrate host inflammation in response to microbial pathogen infection (<xref ref-type="fig" rid="F1">Figure 1</xref>).</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>The canonical and non-canonical NF-&#x003BA;B signaling pathway. The canonical pathway is induced by TLRs, TNFRs, and IL-1R. Activation of this cascade leads to the phosphorylation and degradation of inhibitory protein I&#x003BA;B. NF-&#x003BA;B is activated by release from the I&#x003BA;B-containing complex, then translocating into nucleus. The non-canonical pathway is dependent on the activation of NF-&#x003BA;B2 (p100)/ RelB complex by BAFFR, CD40, and RANK. This cascade induces phosphorylation of NIK, which subsequently phosphorylates IKK&#x003B1;. Then p52-RelB heterodimer is activated and translocate to the nucleus. The activation of NF-&#x003BA;B signaling regulates various cellular processes through targeting the expression of cytokines, chemokines and other genes.</p></caption>
<graphic xlink:href="fimmu-11-01387-g0001.tif"/>
</fig>
</sec>
<sec>
<title>NF-&#x003BA;B Activation, Inflammation and Cancer</title>
<p>Activation of the NF-&#x003BA;B cascade is a central regulator of host responses to microbial infection. The innate immune response, a first line of host defense against different microorganisms, is modulated by the NF-&#x003BA;B signaling pathway, which in turn promotes the expression of target genes (<xref ref-type="bibr" rid="B12">12</xref>, <xref ref-type="bibr" rid="B26">26</xref>). Most importantly, NF-&#x003BA;B acts as a central regulator of the immune response and inflammation by upregulating many chemokines (CXCL1, CXCL2, CXCL3, etc.) and cytokines (TNF&#x003B1;, IL-1&#x003B2;, IL-6, IL-8, etc.) (<xref ref-type="bibr" rid="B27">27</xref>). Activated NF-&#x003BA;B also affects cellular proliferation and apoptosis by targeting Bcl2, IAPs, and cyclins. In addition, NF-&#x003BA;B is essential for the induction of antimicrobial effectors that can effectively eliminate pathogenic microbes, such as antimicrobial peptides (AMPs) (<xref ref-type="bibr" rid="B28">28</xref>).</p>
<p>NF-&#x003BA;B, a critical regulator, has been linked to inflammation and cancer at multiple levels (<xref ref-type="bibr" rid="B13">13</xref>, <xref ref-type="bibr" rid="B29">29</xref>). On the one hand, inflammation is a host-protective response to microbial pathogens or tissue damage. Upon stimulation by diverse bacterial species (<italic>H. pylori, F. nucleatum, etc</italic>.), NF-&#x003BA;B is highly activated at the site of infection for its antimicrobial activity and maintenance of tissue homeostasis (<xref ref-type="bibr" rid="B30">30</xref>). On the other hand, the strong involvement of the NF-&#x003BA;B pathway in the adaptive immune response, through either B or T cells, increases the severity and extent of inflammation (<xref ref-type="bibr" rid="B31">31</xref>). Constitutive chronic inflammation may lead to damaged tissues, autoimmune diseases and cancer initiation by increased cellular stresses and the accumulation of DNA damage. The alteration of genetic stability and epigenetic states at the site of damaged tissues contributes to generating a pro-tumorigenic microenvironment (<xref ref-type="bibr" rid="B32">32</xref>). Elevated NF-&#x003BA;B activity and the increased expression of proinflammatory cytokines have been documented in various tumorous tissues (<xref ref-type="bibr" rid="B33">33</xref>, <xref ref-type="bibr" rid="B34">34</xref>). Constitutive activation of NF-&#x003BA;B turns on the transcription of genes that promote cell proliferation, cell survival, and genomic instability and thereby contributes to oncogenic mutations. There is strong evidence that the inducible activation of the NF-&#x003BA;B cascade promotes cell proliferation by targeting cyclin D<sub>1</sub> expression and inhibits cell apoptosis by targeting BCl<sub>2</sub> expression (<xref ref-type="bibr" rid="B35">35</xref>, <xref ref-type="bibr" rid="B36">36</xref>). NF-&#x003BA;B can be activated following DNA damage. The activation of NF-&#x003BA;B triggers acute and chronic inflammation, which in turn is linked to decreased genomic stability and genetic mutations in cancer initiation and progression (<xref ref-type="bibr" rid="B37">37</xref>). As a result, the NF-&#x003BA;B signaling pathway is believed to play an important role in the pathogenesis and carcinogenesis of microbial infection. Here, we focus on the bacteria that can cause gastrointestinal cancer by modulating the NF-&#x003BA;B signaling pathway.</p>
</sec>
</sec>
<sec id="s3">
<title>Bacterial Pathogens Linked to Gastrointestinal Tumorigenesis</title>
<sec>
<title>The Gastric Microbiota and Gastric Cancer</title>
<p>No bacterium was known to specialize in colonization of the human stomach, with its unique acid environment, until the discovery of the gram-negative bacterium <italic>H. pylori</italic>, which was first reported in the stomachs of patients with peptic ulcers in 1982 (<xref ref-type="bibr" rid="B38">38</xref>). To survive in acidic conditions, <italic>H. pylori</italic> produces a large amount of the enzyme urease, which catalyzes the hydrolysis of urea to ammonia, thereby neutralizing gastric acid (<xref ref-type="bibr" rid="B39">39</xref>). Approximately half of the world&#x00027;s population is infected with <italic>H. pylori</italic>, mainly in developing countries (<xref ref-type="bibr" rid="B40">40</xref>). <italic>H. pylori</italic> infection has been extensively studied and found to be associated with an increased risk of gastric adenocarcinoma. Long-term infection with <italic>H. pylori</italic> is an inducible factor leading to gastric atrophic gastritis, intestinal metaplasia, dysplasia, and ultimately gastric cancer, a sequence also called the Correa cascade of multistep gastric carcinogenesis (<xref ref-type="bibr" rid="B41">41</xref>). Accumulating data from clinical follow-up studies suggest that eradication of <italic>H. pylori</italic> significantly reduces the risk of gastric cancer (<xref ref-type="bibr" rid="B42">42</xref>, <xref ref-type="bibr" rid="B43">43</xref>). This is illustrated by the finding that patients have a lower incidence of metachronous gastric cancer following treatment to eradicate <italic>H. pylori</italic> (<xref ref-type="bibr" rid="B44">44</xref>). Additionally, in patients with <italic>H. pylori</italic> infection who had a family history of gastric carcinoma in their first-degree relatives, <italic>H. pylori</italic> eradication significantly decreased gastric cancer risk (<xref ref-type="bibr" rid="B45">45</xref>).</p>
<p>Some heterogeneity exists between different <italic>H. pylori</italic> strains. High prevalence of <italic>H. pylori</italic> infection, but low prevalence of GC incidence, was found in many African countries (<xref ref-type="bibr" rid="B46">46</xref>). Multiple mechanisms are involved in the interaction between the host and pathogenic <italic>H. pylori</italic>. Both bacterial and host genetic factors contribute to <italic>H. pylori</italic> infection-induced chronic inflammation, metaplasia and gastric tumorigenesis (<xref ref-type="bibr" rid="B47">47</xref>). From the perspective of bacteria, the virulence factors of <italic>H. pylori</italic> have been demonstrated to influence this microorganism&#x00027;s pathogenicity. Cytotoxin-associated gene A (CagA) and vacuolating cytotoxin A (VacA), the most intensively investigated virulence factors, play significant roles in gastric adenocarcinoma induced by <italic>H. pylori</italic> infection. The bacterium utilizes a type IV secretion system (T4SS) to inject CagA into host gastric epithelial cells. As a result, CagA is responsible for the dysregulation of cellular proliferation and apoptosis through disturbing the PI3K/AKT, MEK/ERK, and Wnt/&#x003B2;-catenin signaling pathways (<xref ref-type="bibr" rid="B48">48</xref>). Additionally, it has been indicated that CagA induces an inflammatory response via activation of the NF-&#x003BA;B pathway (<xref ref-type="bibr" rid="B49">49</xref>). In addition, the VacA toxin of <italic>H. pylori</italic> can rapidly cause vacuolation in gastric epithelial cells (<xref ref-type="bibr" rid="B50">50</xref>). From the perspective of host genetics, gene polymorphisms can increase the risk of gastric cancer in patients with <italic>H. pylori</italic> infection. Polymorphisms in the IL-1&#x003B2; gene increase the risk of gastric carcinogenesis in <italic>H. pylori</italic>-positive populations (<xref ref-type="bibr" rid="B51">51</xref>).</p>
<p>With the development of sequencing platforms and bioinformatics tools, 16S rRNA gene sequencing based on hypervariable regions was performed to study the profile of the human microbiome, including mainly the microbiotas of the stomach and intestine (<xref ref-type="bibr" rid="B52">52</xref>). As a result, many gastric bacteria species other than <italic>H. pylori</italic> have been identified. The stomachs of <italic>H. pylori</italic>-positive and <italic>H. pylori</italic>-negative individuals exhibit significantly different bacterial communities. Among <italic>H. pylori</italic>-positive patients, <italic>H. pylori</italic> is the most dominant bacterium in the stomach. In contrast, the gastric microbiota of <italic>H. pylori</italic>-negative individuals is more diverse and consists mainly of <italic>Firmicutes, Proteobacteria, Bacteroidetes, Fusobacteria, and Actinobacteria</italic> (<xref ref-type="bibr" rid="B53">53</xref>). Recently, gastric bacterial communities were shown to be associated with gastric malignancies. Ferreira et al. showed that <italic>Firmicutes</italic> and <italic>Actinobacteria</italic> are over-represented in the gastric carcinoma microbiota compared with the chronic gastritis microbiota. Furthermore, gastric cancer samples exhibit a significant reduction in the abundance of <italic>H. pylori</italic> (<xref ref-type="bibr" rid="B54">54</xref>). Coker et al. identified differences in mucosal bacterial interactions across stages of gastric carcinogenesis, from superficial gastritis to atrophic gastritis, intestinal metaplasia, and GC. The significant enrichment and central network locations of five microbes (<italic>Peptostreptococcus stomatis, Streptococcus anginosus, Parvimonas micra, Slackia exigua</italic>, and <italic>Dialister pneumosintes</italic>) suggest their important role in GC progression (<xref ref-type="bibr" rid="B55">55</xref>).</p>
<p>The effect of non-<italic>H. pylori</italic> bacteria on gastric pathology is further supported by animal model systems. In transgenic INS-GAS mice with high circulating gastrin levels, colonization of <italic>H. pylori</italic> led to a significant increase in <italic>Firmicutes</italic> and reduction in <italic>Bacteroidetes</italic> (<xref ref-type="bibr" rid="B41">41</xref>). Other <italic>Helicobacter</italic> species, such as <italic>Helicobacter felis</italic> (<italic>H. felis</italic>), commonly colonize animals. Mongolian gerbils infected with <italic>H. felis</italic> developed premalignant gastric lesions (<xref ref-type="bibr" rid="B56">56</xref>). Moreover, germ-free transgenic INS-GAS mice supplemented with normal intestinal flora (IF) or 3 species of commensal bacteria (rASF; ASF356 <italic>Clostridium</italic> species, ASF361 <italic>Lactobacillus murinus</italic>, and ASF519 <italic>Bacteroides</italic> species) developed more severe gastric lesions and elevated levels of proinflammatory genes than <italic>H. pylori</italic>-monocolonized INS-GAS mice (<xref ref-type="bibr" rid="B57">57</xref>). These findings suggest that microbial diversity contributes to gastric cancer risk. Long-term <italic>H. pylori</italic> infection causes gastric atrophy, which leads to achlorhydria and decreased acid secretion. Notably, <italic>H. pylori</italic> infection and alteration of the acidity of the gastric environment may result in alterations in the gastric microbiota (<xref ref-type="bibr" rid="B58">58</xref>). However, due to the difficulty in bacterial isolation and culture, the functional role and pathogenic mechanisms of microbial communities in gastric neoplasia remain unclear.</p>
<p>There are some genetic, environmental, dietary, and lifestyle factors that influence microbiome system. Genetic mutation such as CDH1 and TP53, lifestyles including smoking, low fruits and vegetables consumption, high salts, nitrates, and pickled foods intake and overweight are also found to be associated with increased GC risk (<xref ref-type="bibr" rid="B59">59</xref>, <xref ref-type="bibr" rid="B60">60</xref>). He et al. reported that 12 week high-fat diet lead to the dysbiosis of gastrointestinal microbiota in C57BL/6 mice, what&#x00027;s more, the alterations of microbiota in stomach was earlier than that in gut and the dysbiosis of gastrointestinal microbiota may related with the metabolic disorders of mice (<xref ref-type="bibr" rid="B61">61</xref>). Arita et al. showed that high-fat diet leads to severe dysbiosis of gastric microbiota and increased gastric leptin, which lead to the development of gastric intestinal metaplasia in C57 mice (<xref ref-type="bibr" rid="B62">62</xref>). A recent large scale blinded randomized placebo controlled trial in China showed that both <italic>H. pylori</italic> treatment and vitamin supplementation lead to a significant reduced incidence of GC, and <italic>H. pylori</italic> treatment, vitamin or garlic supplementation lead to a significant reduction of GC mortality (<xref ref-type="bibr" rid="B42">42</xref>).</p>
</sec>
<sec>
<title>Imbalance Between Gut Microbiota and Intestinal Cancer</title>
<p>Changes in the gut microbiota, referred to as dysbiosis, are involved in the development of multiple diseases, including cancer, metabolic diseases, cardiovascular diseases and depression (<xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B64">64</xref>). Colorectal cancer (CRC) is the third most common cancer worldwide (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B65">65</xref>). Effects of the fecal microbiota transplant of human fecal samples to germ-free mice suggested the effect of gut microbiota on colorectal carcinogenesis. Germ-free mice gavaged with stool from patients with CRC showed increased levels of proinflammatory genes, including the chemokines CXCR1 and CXRC2 as well as the cytokines IL-17A, IL-22, and IL-23A (<xref ref-type="bibr" rid="B66">66</xref>). Sequencing studies have revealed discrepancies in the gut microbiomes of patients with colorectal cancer and healthy individuals. 16S rRNA sequencing data from stool samples from CRC patients suggested that several genera, including <italic>Fusobacterium, Porphyromonas, Enterococcus, Escherichia, Klebsiella, Streptococcus</italic>, and <italic>Parvimonas</italic>, are linked to CRC (<xref ref-type="bibr" rid="B67">67</xref>&#x02013;<xref ref-type="bibr" rid="B69">69</xref>). Hibberd et al. analyzed the intestinal microbiota from tumor tissues and the normal mucosa. Several taxa, including <italic>Fusobacterium</italic>, Selenomonas and Peptostreptococcus, were selectively enriched in patients with colon cancer compared to control individuals. Probiotic intervention significantly altered the microbial composition (<xref ref-type="bibr" rid="B70">70</xref>). Furthermore, significant differences in microbial communities were observed across the stages of colorectal carcinogenesis. Nakatsu et al. compared the mucosal microbiotas of normal tissues, adenomatous polyps and carcinomas. <italic>Fusobacterium, Parvimonas, Gemella</italic>, and <italic>Leptotrichia</italic> were significantly increased in patients with adenoma, which is an early-stage CRC, whereas the abundance of bacterial communities, including <italic>Bacteroides, Blautia</italic>, and <italic>F. prausnitzii</italic>, was decreased. In late-stage CRC, neither of these changes was significant. Furthermore, <italic>Peptostreptococcus</italic> and <italic>Parvimonas</italic> showed a strongly positive relationship in colonic carcinoma and carcinoma-adjacent mucosa (<xref ref-type="bibr" rid="B71">71</xref>). In addition, Warren et al. compared the CRC tissues and matched normal control tissues. Co-occurrence network analysis was performed to identify microbe-microbe and host-microbe associations specific to tumors. The authors confirmed tumor over-representation of <italic>Fusobacterium species</italic> and observed significant co-occurrence within individual tumors of <italic>Fusobacterium, Leptotrichia</italic>, and <italic>Campylobacter species</italic> (<xref ref-type="bibr" rid="B72">72</xref>). As a corollary, these studies may identify novel CRC-associated microbial markers, such as <italic>Fusobacterium, Peptostreptococcus, Leptotrichia</italic>, and <italic>Parvimonas</italic>.</p>
<p>Recently, an increasing number of studies have elucidated the functional roles and molecular mechanisms of several specific bacterial species in CRC carcinogenesis, including <italic>Fusobacterium nucleatum</italic> (<italic>F. nucleatum</italic>), <italic>Escherichia coli</italic> (<italic>E. coli</italic>), <italic>Peptostreptococcus anaerobius</italic> (<italic>P. anaerobius</italic>), and <italic>Bacteroides fragilis</italic> (<italic>B. fragilis</italic>) (<bold>Figure 3</bold>). <italic>F. nucleatum</italic> is highly increased in CRC patients compared to healthy individuals, and its abundance is closely related to a worse survival rate (<xref ref-type="bibr" rid="B73">73</xref>, <xref ref-type="bibr" rid="B74">74</xref>). Biological informatic, functional and mechanistic studies in human samples, cell lines and animal models have revealed the potential role of <italic>F. nucleatum</italic> in CRC chemotherapy. Specifically, these bacteria could promote CRC resistance to chemotherapy through the activation of autophagy mediated by TLR4/MYD88 and miRNAs (<xref ref-type="bibr" rid="B75">75</xref>). These studies suggest that <italic>F. nucleatum</italic> serves as a candidate prognostic biomarker in CRC. Although <italic>E. coli</italic> is a commensal bacterium that colonizes the human GI tract, several studies indicate a link between some pathogenic <italic>E. coli</italic> strains and CRC risk. <italic>E. coli</italic> are divided into 4 phylotypes, among which specific <italic>E. coli</italic> strains from each phylotype have been associated with IBD, which is a known risk factor for CRC (<xref ref-type="bibr" rid="B76">76</xref>, <xref ref-type="bibr" rid="B77">77</xref>). Infection with pathogenic <italic>E. coli</italic> in multiple intestinal neoplasia (Min) mice significantly increased colonic polys compared with those in control groups (<xref ref-type="bibr" rid="B78">78</xref>). Pathogenic <italic>E. coli</italic> produces various virulence factors. Colibactin, a hybrid polyketide-peptide encoded by the <italic>pks</italic> genomic island, has been shown to induce DNA double-strand breaks and genomic instability in human cells (<xref ref-type="bibr" rid="B79">79</xref>), contributing to mutational signatures in CRC (<xref ref-type="bibr" rid="B80">80</xref>). In addition, the anaerobic bacterium <italic>P. anaerobius</italic>, which is enriched in the fecal and mucosal samples of CRC patients, was recently demonstrated to promote CRC carcinogenesis through <italic>in vitro</italic> and <italic>in vivo</italic> studies (<xref ref-type="bibr" rid="B81">81</xref>). The gram-negative bacterium <italic>B. fragilis</italic> is a normal commensal bacterial species that colonizes the colon. A subset of <italic>B. fragilis</italic> termed enterotoxigenic <italic>B. fragilis</italic> produces the <italic>B</italic>. <italic>fragilis</italic> toxin (<italic>BFT</italic>) and has been found to play an important role in CRC tumorigenesis and development. Sears et al. revealed the increased abundance of the <italic>BFT</italic> gene in mucosal biopsies from patients with CRC compared to normal individuals. Furthermore, increased <italic>bft</italic> positivity was found in early to progressive CRC patients (<xref ref-type="bibr" rid="B82">82</xref>). This research team then investigated the role of the gut microbiota in the development of familial adenomatous polyposis (FAP), which is an autosomal dominant disease caused by the <italic>APC</italic> gene in which many colorectal adenomas can develop (<xref ref-type="bibr" rid="B83">83</xref>). The genes colibactin from <italic>E. coli</italic> and <italic>bft</italic> from <italic>B. fragilis</italic> are more highly expressed in patients with FAP compared to healthy individuals. Mechanistically, the co-colonization of <italic>E. coli</italic> and <italic>B. fragilis</italic> in the colon promotes the expression of inflammatory cytokines and accelerates DNA damage (<xref ref-type="bibr" rid="B84">84</xref>). As a result, modulation of the gut microbiota may be an effective strategy for the prevention or treatment of CRC.</p>
<p>Some genetic, diet, lifestyle and other environmental factor have been shown to modulate gut microbiota, further affect host metabolism, immune response and promote colorectal carcinogenesis. Liang et al. reported that APC mutation was closely related to the alteration of gut microbiota that plays an important role in the development of CRC from intestinal adenomatous polyps (<xref ref-type="bibr" rid="B85">85</xref>). The increasing incidence of CRC in western countries is partly attributed to the increasing adoption of western lifestyles and overweight. High fat diet is a well-known factor to influence the gut microbiota and promote CRC development in animal model (<xref ref-type="bibr" rid="B86">86</xref>). Interestingly, it has been demonstrated that Mediterranean Diet (MD) could counteract CRC that caused by high-fat diet by modulate apoptosis and gut microbiota in mice (<xref ref-type="bibr" rid="B87">87</xref>).</p>
</sec>
</sec>
<sec id="s4">
<title>Modulation of the NF-&#x003BA;B Signaling Pathway in Response to Bacterial Infection in Gastric Tumorigenesis</title>
<p>Commensal microbes in the GI tract are essential for the maintenance of GI functions, including development, immune responses and homeostasis. It is becoming increasingly clear that disruption of the microbiota contributes to gastric and intestinal tumorigenesis. In particular, upon infection with intestinal bacteria, host cells rapidly employ the intracellular NF-&#x003BA;B signaling pathway to activate antibacterial immunity and maintain intestinal barrier integrity (<xref ref-type="bibr" rid="B30">30</xref>). A number of studies have reported that during bacterial infection, the NF-&#x003BA;B pathway controls multiple cellular processes, including inflammation, proliferation and apoptosis, by regulating the expression of a network of downstream effectors. As a result, the NF-&#x003BA;B signaling pathway is strongly involved in microbiota-associated gastric (<xref ref-type="fig" rid="F2">Figure 2</xref>) and colorectal tumorigenesis (<xref ref-type="fig" rid="F3">Figure 3</xref>). Here, we focus on the bacteria that modulate the NF-&#x003BA;B pathway in gastrointestinal tumorigenesis.</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>A depiction of the modulation of NF-&#x003BA;B signaling pathway by gastric microbiota, especially <italic>H. pylori</italic>. Gastric epithelial cells PRRS (NOD1, TLRs) specifically recognize the virulence factors such as CagA and peptidoglycan that are delivered by the <italic>H. pylori</italic> cag pathogenicity island. Then the NF-&#x003BA;B pathway is activated through IKK-mediated phosphorylation of I&#x003BA;B. Active NF-&#x003BA;B translocate to nucleus and induce downstream genes expression. NF-&#x003BA;B activation promotes acute, chronic inflammation and immune response via induction of cytokines and chemokines. The accumulation of DNA damage is associated with activation of the NF-&#x003BA;B signaling pathway. Several miRNAs and other genes can be activated. As a result, <italic>H. pylori</italic> infection induces gastric carcinogenesis via regulation of cell proliferation and survival. Other microorganisms including <italic>L. casei</italic> and <italic>H. felis</italic> link the NF-&#x003BA;B pathway to gastric inflammation and tumorigenesis.</p></caption>
<graphic xlink:href="fimmu-11-01387-g0002.tif"/>
</fig>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>A depiction of the modulation of NF-&#x003BA;B signaling pathway by gut microbiota in colorectal tumorigenesis. In response to intestinal bacterial pathogens including <italic>F. nucleatum, P. anaerobius, E. coli, B. fragilis</italic>, intestinal epithelial cells employ several receptors such as TLRs and integrins to recognize distinct microbial components. The NF-&#x003BA;B signaling pathway is subsequently activated to induce the expression of pro-inflammatory cytokines, chemokines, adhesion molecules and other genes, which ultimately lead to the cellular processes changes and contribute to colorectal carcinogenesis.</p></caption>
<graphic xlink:href="fimmu-11-01387-g0003.tif"/>
</fig>
<sec>
<title><italic>H. pylori</italic> Infection, the NF-&#x003BA;B Signaling Pathway, and Gastric Carcinogenesis</title>
<p><italic>H. pylori</italic>-infected individuals develop acute or chronic gastritis, and in a subset of subjects, gastritis may progress to peptic ulcer disease, in particular, intestinal metaplasia and gastric carcinomas (<xref ref-type="bibr" rid="B88">88</xref>). There is very compelling evidence for the involvement of the NF-&#x003BA;B pathway in <italic>H. pylori</italic>-associated gastric tumorigenesis. The activity of NF-&#x003BA;B was shown to be markedly increased in the lamina propria and epithelium of the antral mucosa of <italic>H. pylori</italic>-infected adults compared to those of uninfected controls, suggesting that neutrophil infiltration in the gastric mucosa of <italic>H. pylori</italic>-infected gastritis patients is attributed to activation of the NF-&#x003BA;B pathway (<xref ref-type="bibr" rid="B89">89</xref>). Twenty years ago, it was discovered that <italic>H. pylori</italic> infection increased NF-&#x003BA;B activity and the nuclear translocation of NF-&#x003BA;B p50/p65 heterodimers and p50 homodimers in transformed gastric epithelial AGS cells. Furthermore, activation of the NF-&#x003BA;B pathway by <italic>H. pylori</italic> infection could lead to the induction of proinflammatory cytokines such as IL-8 and IL-17 (<xref ref-type="bibr" rid="B90">90</xref>, <xref ref-type="bibr" rid="B91">91</xref>). Consistently, the importance of NF-&#x003BA;B in <italic>H. pylori</italic> infection-induced gastric neoplasia was confirmed in animal models (<xref ref-type="bibr" rid="B92">92</xref>).</p>
<p>Upon sensing pathogenic <italic>H. pylori</italic>, cellular pattern recognition receptors (PRRs) induce intracellular signaling pathways in the innate immune response. TLRs and NOD1 are common PRRs involved in activation of the NF-&#x003BA;B signaling pathway (<xref ref-type="bibr" rid="B93">93</xref>). It was reported that infection with <italic>H. pylori</italic> strain 26695 increased NF-&#x003BA;B activity and chemokine gene expression in HEK293 and gastric epithelial MKN45 cells transfected with TLR2 and TLR5 but not TLR4 (<xref ref-type="bibr" rid="B94">94</xref>). NOD1 specifically recognizes peptidoglycan (PGN) delivered by the <italic>H. pylori</italic> cag pathogenicity island. Experimental studies, both <italic>in vivo</italic> and <italic>in vitro</italic>, have indicated that NOD1 induces NF-&#x003BA;B activity in response to pathogenic <italic>H. pylori</italic>, which is implicated in gastric inflammation and malignant lesions (<xref ref-type="bibr" rid="B95">95</xref>, <xref ref-type="bibr" rid="B96">96</xref>). The virulence factor CagA has been identified to be responsible for the NF-&#x003BA;B-induced response subsequent to NOD1 activation (<xref ref-type="bibr" rid="B97">97</xref>).</p>
<p>Gastric chronic inflammation caused by the NF-&#x003BA;B pathway in response to <italic>H. pylori</italic> infection finally contributes to gastric carcinogenesis through accumulated DNA damage and abnormal cell polarity and proliferation. <italic>H. pylori</italic> infection induces DNA damage to exert genotoxic effects (<xref ref-type="bibr" rid="B98">98</xref>). Hartung et al. reported that the induction of DNA double-strand breaks (DSBs) is associated with activation of the NF-&#x003BA;B signaling pathway. DSBs were greatly reduced in AGS cells treated with p65/RelA RNAi or an NF-&#x003BA;B inhibitor. Similarly, the loss of &#x003B2;1 integrin resulted in decreased DSBs and inhibited IL-8 secretion after infection with <italic>H. pylori</italic>. Intriguingly, <italic>H. pylori</italic>-induced DNA damage can promote NF-&#x003BA;B target gene transactivation and host cell survival (<xref ref-type="bibr" rid="B99">99</xref>).</p>
<p>Moreover, NF-&#x003BA;B drives cell proliferation, which promotes metaplastic hyperplasia and neoplasia in the stomach. <italic>H. pylori</italic> infection has been shown to induce the activity of NF-&#x003BA;B and AP-1, which in turn promotes the expression of oncogenes (&#x003B2;-catenin, c-myc) and mediates the hyperproliferation of gastric cells (<xref ref-type="bibr" rid="B100">100</xref>). DARPP-32 has been identified as a transcriptional target gene of the NF-&#x003BA;B pathway that is significantly upregulated following <italic>H. pylori</italic> infection. Consequently, induction of DARPP-32 counteracted <italic>H. pylori</italic>-induced cell death and promoted gastric cell survival through the activation of AKT (<xref ref-type="bibr" rid="B101">101</xref>). Small RNAs such as miRNA-223-3p have been documented to link NF-&#x003BA;B, cellular proliferation and gastric carcinogenesis (<xref ref-type="bibr" rid="B102">102</xref>). As a result, <italic>H. pylori</italic> infection rapidly leads to activation of the NF-&#x003BA;B pathway, which triggers various molecular mechanisms to affect gastric neoplastic lesions.</p>
<p>In addition to <italic>H. pylori</italic>, several other microorganisms exhibit distinct functions in the GI tract. Many probiotics have been shown to inhibit the development of gastric diseases. Hwang et al. reported that <italic>Lactobacillus casei</italic> (<italic>L. casei</italic>) extract suppressed the NF-&#x003BA;B pathway by decreasing the expression of NF-&#x003BA;B p65 and I&#x003BA;B, which in turn induced apoptosis and inhibited the growth of gastric cancer cells (<xref ref-type="bibr" rid="B103">103</xref>). Infection with the non-<italic>pylori Helicobacter</italic> species <italic>H. felis</italic> links the IKK&#x003B2;/NF-&#x003BA;B pathway to gastric inflammation and tumorigenesis. Shibata et al. generated mice in which IKK&#x003B2; was conditionally deleted in gastric epithelial cells and myeloid cells to determine the role of IKK&#x003B2;/NF-&#x003BA;B signaling in <italic>H. felis</italic> infection-associated gastric neoplasia. They found that deletion of IKK&#x003B2; in gastric epithelial cells resulted in increased apoptosis, the accumulation of ROS and DNA damage, severe inflammation and more rapid progression to gastric preneoplasia (<xref ref-type="bibr" rid="B104">104</xref>).</p>
</sec>
</sec>
<sec id="s5">
<title>Modulation of the NF-&#x003BA;B Signaling Pathway by the Intestinal Microbiota in CRC</title>
<sec>
<title><italic>F. nucleatum</italic> and the NF-&#x003BA;B Signaling Pathway</title>
<p>Multiple studies over the past few years have definitively addressed the carcinogenic properties of <italic>F. nucleatum</italic> in the initiation and development of CRC. It has become clear that <italic>F. nucleatum</italic> infection modulates the NF-&#x003BA;B signaling pathway, targeting downstream genes that regulate various cellular processes, such as the inflammatory response, cell proliferation, and cell migration, and finally affecting tumorigenesis (<xref ref-type="bibr" rid="B105">105</xref>&#x02013;<xref ref-type="bibr" rid="B107">107</xref>). In the APC<sup>Min/&#x0002B;</sup> mouse model, <italic>F. nucleatum</italic> treatment accelerated small intestinal and colonic tumorigenesis. Increased nuclear translocation of the p65 NF-&#x003BA;B subunit was observed in tumors (<xref ref-type="bibr" rid="B106">106</xref>). <italic>F. nucleatum</italic> infection can rapidly induce the host innate immune response, which activates the NF-&#x003BA;B signaling pathway. Several studies have shown that the common TLR4/MYD88 innate immune signaling pathway is activated following <italic>F. nucleatum</italic> infection in CRC cells (<xref ref-type="bibr" rid="B75">75</xref>). Yang et al. found that infection with <italic>F. nucleatum</italic> significantly activated the TLR4/MyD88 pathway to upregulate the activity of NF-&#x003BA;B p65 and p50 in HCT116 CRC cells. Then, miR-21, an oncogenic target miRNA in cancer, was found to be increased by <italic>F. nucleatum</italic> through binding to NF-&#x003BA;B, which thereby promoted cell survival and invasion. Inhibition of NF-&#x003BA;B impaired <italic>F. nucleatum</italic>-induced CRC cell proliferation and cell invasion. Hyperactivation of NF-&#x003BA;B was found in CRC tissues with high amounts of <italic>F. nucleatum</italic> (<xref ref-type="bibr" rid="B107">107</xref>). NLRX1 is a member of the NLR family that plays an important role in host innate immunity. NLRX1 was shown to negatively modulate inflammatory cytokine IL-8 expression via the transcriptional factor NF-&#x003BA;B in response to <italic>F. nucleatum</italic> infection (<xref ref-type="bibr" rid="B108">108</xref>). Additionally, induction of NF-&#x003BA;B by <italic>F. nucleatum</italic> infection facilitated ROS generation and production of the proinflammatory cytokines TNF-&#x003B1; and IL-1&#x003B2; (<xref ref-type="bibr" rid="B109">109</xref>).</p>
<p>Ulcerative colitis (UC) is a major type of IBD and a known risk factor for CRC (<xref ref-type="bibr" rid="B108">108</xref>). <italic>F. nucleatum</italic> was more highly enriched in human UC tissues than in normal tissues. Mechanistically, experimental studies from cells and animal models have shown that <italic>F. nucleatum</italic> infection activates the canonical NF-&#x003BA;B pathway through increasing phosphorylation levels of the NF-&#x003BA;B subunits p65 and I&#x003BA;B-&#x003B1;. The intestinal epithelial barrier marker ZO-1, a downstream target gene of the NF-&#x003BA;B pathway, was significantly decreased following <italic>F. nucleatum</italic> infection. Furthermore, pretreatment with human anti-IL-17F antibody attenuated <italic>F. nucleatum</italic>-induced NF-&#x003BA;B activity and intestinal inflammation, which suggests that <italic>F. nucleatum</italic> activates the NF-&#x003BA;B pathway via IL-17F (<xref ref-type="bibr" rid="B110">110</xref>). In addition, <italic>F. nucleatum</italic> was found to be more abundant in the patients with Crohn&#x00027;s diseases, which is another common type of IBD<italic>. F. nucleatum</italic> infection could promote intestinal mucosal barrier destruction during the development of Crohn&#x00027;s diseases (<xref ref-type="bibr" rid="B111">111</xref>). <italic>F. nucleatum</italic> is a heterogeneous species with five proposed subspecies <italic>(ssp.)</italic>, i.e., <italic>ssp. animalis, ssp. fusiforme, ssp. nucleatum, ssp. polymorphum</italic>, and <italic>ssp. vincentii</italic>, which show the pathogenic differences. Among the five subspecies, <italic>ssp. fusiforme</italic> and <italic>ssp. vincentii</italic> are more frequently associated with health while <italic>ssp. nucleatum</italic> associated with diseases (<xref ref-type="bibr" rid="B112">112</xref>, <xref ref-type="bibr" rid="B113">113</xref>). Adherence and invasion are essential mechanisms for antimicrobial host defense mechanism and induction of inflammatory response. The invasiveness of <italic>F. nucleatum</italic> varies widely among different strains, and has been shown as directly related to IBD disease status (<xref ref-type="bibr" rid="B114">114</xref>).</p>
</sec>
<sec>
<title><italic>E. coli</italic> and the NF-&#x003BA;B Signaling Pathway</title>
<p><italic>E. coli</italic> is one of the most common bacterial species that colonizes the human GI tract. Numerous studies have identified <italic>E. coli</italic> as a risk factor for the development of Crohn&#x00027;s disease, ulcerative colitis, and CRC. Enteropathogenic and enterohemorrhagic <italic>E. coli</italic> use a type III secretion system (T3SS) to transport dozens of effector proteins into host cells; these effector proteins in turn manipulate the host inflammatory response through activation of the NF-&#x003BA;B pathway (<xref ref-type="bibr" rid="B115">115</xref>). This bacterial pathogen has developed various mechanisms to regulate the activation of NF-&#x003BA;B. Pallett et al. found that the highly conserved non-LEE (locus of enterocyte effacement)-encoded effector (NleF) is responsible for nuclear translocation of the NF-&#x003BA;B p65 subunit and IL-8 production (<xref ref-type="bibr" rid="B116">116</xref>). Sahu et al. reported that non-pathogenic <italic>E. coli</italic> has emerged as a tumor promoter that enhances oncogenicity through enrichment of the cancer stem cell population. Mechanistically, internalization of <italic>E. coli</italic> leads to the activation of NF-&#x003BA;B through increased phosphorylation of the NF-&#x003BA;B subunit RelA/p65 and IKK&#x003B1;, inactivation of I&#x003BA;B&#x003B1;, and induction of the Wnt/&#x003B2;-catenin pathway through the upregulation of &#x003B2;-catenin and its downstream genes. Then, NF-&#x003BA;B and Wnt/&#x003B2;-catenin synergistically promote tumorigenic stemness traits (<xref ref-type="bibr" rid="B117">117</xref>). In addition, high NF-&#x003BA;B expression has been demonstrated in <italic>E. coli</italic>-associated IBD patients. <italic>E. coli</italic> strains isolated from IBD patients were found to induce the NF-&#x003BA;B and TNF-&#x003B1; promoters in HT-29 human colonic cells (<xref ref-type="bibr" rid="B118">118</xref>). Karrasch et al. determined the role of the TLR/NF-&#x003BA;B signaling pathway in bacteria-induced colitis using animal models&#x02014;IL-10-deficient mice and NF-&#x003BA;B knock-in mice. As a result, coinfection with the commensal bacterial strain <italic>Enterococcus faecalis</italic> led to experimental colitis through activation of the TLR/NF-&#x003BA;B signaling pathway (<xref ref-type="bibr" rid="B119">119</xref>). Taken together, these results show that some <italic>E. coli</italic> strains, in which the NF-&#x003BA;B pathway induces chronic inflammation, play a crucial role in colorectal carcinogenesis.</p>
</sec>
<sec>
<title><italic>P. anaerobius</italic> and the NF-&#x003BA;B Signaling Pathway</title>
<p><italic>P. anaerobius</italic> is a gram-positive anaerobic bacterium that was recently identified to be especially enriched in the stool samples of CRC patients. Jun Yu et al. from the Chinese University of Hong Kong recently undertook research to determine the role of <italic>P. anaerobius</italic> and its molecular mechanism in colorectal carcinogenesis. <italic>P. anaerobius</italic> was found to induce the production of intracellular ROS through its interaction with TLR2 and TLR4. As a result, total cholesterol synthesis and the proliferation of intestinal epithelial cells were significantly enhanced (<xref ref-type="bibr" rid="B81">81</xref>). Similar to other bacteria, <italic>P. anaerobius</italic> adheres to the intestinal mucosa and encodes a virulence factor to induce the host immune response. Putative cell wall binding repeat 2 (PCWBR2), a <italic>P. anaerobius</italic> surface protein, interacts with the corresponding cell surface receptor integrin &#x003B1;2/&#x003B2;1. Subsequently, experimental data from CRC cells and <italic>APC</italic><sup><italic>Min</italic>/&#x0002B;</sup> mice indicated that <italic>P. anaerobius</italic> challenge activated the PI3K/AKT and NF-&#x003BA;B signaling pathways via phosphorylation of the AKT and p65 NF-&#x003BA;B subunits. As a result, <italic>P. anaerobius</italic> modulates the tumor immune microenvironment, including the expansion of myeloid-derived suppressor cells, tumor-associated macrophages and granulocytic tumor-associated neutrophils. Cell proliferation and the proinflammatory response were significantly increased by <italic>P. anaerobius</italic> infection, further accelerating colorectal tumorigenesis (<xref ref-type="bibr" rid="B120">120</xref>).</p>
</sec>
<sec>
<title>Enterotoxigenic <italic>B. fragilis</italic> and the NF-&#x003BA;B Signaling Pathway</title>
<p>Enterotoxigenic <italic>B. fragilis</italic>, but not non-toxigenic <italic>B. fragilis</italic>, is associated with the development of intestinal diseases, such as human inflammatory diarrhea and colorectal carcinogenesis. Enterotoxigenic <italic>B. fragilis</italic> targets intestinal epithelial cells by producing <italic>BFT</italic>. As a result, cells develop molecular mechanisms to activate the NF-&#x003BA;B signaling pathway. To explore the role of BFT in enterotoxigenic <italic>B. fragilis</italic>-triggered tumorigenesis. Chung et al. constructed Apc<sup>Min</sup> mice colonized with an enterotoxigenic B. fragilis strain possessing an in-frame chromosomal deletion of <italic>bft</italic> gene. The results showed that <italic>B. fragilis</italic> stimulated intracellular IL-17 secretion to activate the NF-&#x003BA;B pathway, which in turn induced the expression of chemokines (CXCL1, CXCL2, and CXCL5) that collectively contributed to colonic carcinogenesis (<xref ref-type="bibr" rid="B121">121</xref>, <xref ref-type="bibr" rid="B122">122</xref>). The cytokine IL-8, a key downstream target gene of NF-&#x003BA;B, was also significantly increased in intestinal epithelial cells treated with active enterotoxigenic <italic>B. fragilis</italic> (<xref ref-type="bibr" rid="B123">123</xref>). The &#x003B2;-catenin and GSK3&#x003B2; cellular signaling pathways are involved in NF-&#x003BA;B activity and IL-8 expression in <italic>B. fragilis</italic>-infected cells (<xref ref-type="bibr" rid="B124">124</xref>). Host tissues recruit inflammatory cells to induce sustained inflammation through activation of the NF-&#x003BA;B signaling pathway in pathological processes and increase the risk of CRC through aberrant regulation of other cellular processes, such as cell proliferation and angiogenesis.</p>
</sec>
</sec>
<sec id="s6">
<title>Concluding Remarks</title>
<p>The gastrointestinal microbiota plays an important role in maintaining host physiological processes. Aberration of the microbiota might ultimately result in various diseases such as metabolic, cardiovascular, immune, mental, and gastrointestinal diseases or even cancer. The causal relationship between gastrointestinal cancer and the microbiota has been gradually validated. Indeed, multiple studies suggest that utilizing the microbiota, especially specific bacteria, may provide novel microbial biomarkers for prevention, diagnosis and treatment. Currently, some clinical trials based on these microbes (e.g., <italic>F. nucleatum</italic>)are ongoing. Moreover, the activated NF-&#x003BA;B signaling pathway is considered an important line of defense against microbial pathogens. Abnormal and sustained activation of NF-&#x003BA;B signaling contributes to malignant transformation from inflammation to cancer. Therefore, selectively targeting molecules of the NF-&#x003BA;B signaling pathway to block the association between pathogens and NF-&#x003BA;B shows therapeutic potential and benefit in cancer treatment. For example, specific NF-&#x003BA;B inhibitors targeting the IKK complex have shown promise as anticancer therapeutics (<xref ref-type="bibr" rid="B12">12</xref>). However, beyond the involvement of NF-&#x003BA;B, the relationship between the microbiota and gastrointestinal carcinogenesis is very complex. Moving forward, there is a need to explore and more deeply understand the underlying mechanisms that link the microbiota and host response.</p>
<p>In addition, molecular pathological epidemiology (MPE) that investigate the interactive effect of some specific molecular features and environmental factors on disease prognosis and clinical outcome has been widely applied to cancer research (<xref ref-type="bibr" rid="B125">125</xref>, <xref ref-type="bibr" rid="B126">126</xref>). The host genetic, diet, lifestyle and other environmental factors, which have been closely linked with gut microbiota, are critical for the prevention of gastrointestinal cancer. Modifications of the western lifestyles such as high fat diet that resulting in overweight or obesity could substantially reduce the CRC incidence (<xref ref-type="bibr" rid="B127">127</xref>). Eating less salted or pickled foods is considered to be important for prevention of GC (<xref ref-type="bibr" rid="B128">128</xref>). This promising direction may help to gain new insights into the pathogenic process, prevention and treatment of gastrointestinal cancer.</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>NLi, CP, and NLu discussed the contents. NLi, CP, and YO wrote and edited this manuscript. NLi supervised and oversaw the manuscript. All authors read and approved the final manuscript.</p>
</sec>
<sec id="s8">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
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<back>
<ref-list>
<title>References</title>
<ref id="B1">
<label>1.</label>
<citation citation-type="journal"><person-group person-group-type="author"><collab>Global Burden of Disease Cancer Collaboration</collab> <name><surname>Fitzmaurice</surname> <given-names>C</given-names></name> <name><surname>Allen</surname> <given-names>C</given-names></name> <name><surname>Barber</surname> <given-names>RM</given-names></name> <name><surname>Barregard</surname> <given-names>L</given-names></name> <name><surname>Bhutta</surname> <given-names>ZA</given-names></name> <etal/></person-group>. <article-title>Global, regional, and national cancer incidence, mortality, years of life lost, years lived with disability, and disability-adjusted life-years for 32 cancer groups, 1990 to 2015: a systematic analysis for the global burden of disease study</article-title>. <source>JAMA Oncol</source>. (<year>2017</year>) <volume>3</volume>:<fpage>524</fpage>&#x02013;<lpage>48</lpage>. <pub-id pub-id-type="doi">10.1001/jamaoncol.2016.5688</pub-id><pub-id pub-id-type="pmid">27918777</pub-id></citation></ref>
<ref id="B2">
<label>2.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bray</surname> <given-names>F</given-names></name> <name><surname>Ferlay</surname> <given-names>J</given-names></name> <name><surname>Soerjomataram</surname> <given-names>I</given-names></name> <name><surname>Siegel</surname> <given-names>RL</given-names></name> <name><surname>Torre</surname> <given-names>LA</given-names></name> <name><surname>Jemal</surname> <given-names>A</given-names></name></person-group>. <article-title>Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries</article-title>. <source>CA Cancer J Clin</source>. (<year>2018</year>) <volume>68</volume>:<fpage>394</fpage>&#x02013;<lpage>424</lpage>. <pub-id pub-id-type="doi">10.3322/caac.21492</pub-id><pub-id pub-id-type="pmid">30207593</pub-id></citation></ref>
<ref id="B3">
<label>3.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hansford</surname> <given-names>S</given-names></name> <name><surname>Kaurah</surname> <given-names>P</given-names></name> <name><surname>Li-Chang</surname> <given-names>H</given-names></name> <name><surname>Woo</surname> <given-names>M</given-names></name> <name><surname>Senz</surname> <given-names>J</given-names></name> <name><surname>Pinheiro</surname> <given-names>H</given-names></name> <etal/></person-group>. <article-title>Hereditary diffuse gastric cancer syndrome: CDH1 mutations and beyond</article-title>. <source>JAMA Oncol</source>. (<year>2015</year>) <volume>1</volume>:<fpage>23</fpage>&#x02013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.1001/jamaoncol.2014.168</pub-id><pub-id pub-id-type="pmid">26182300</pub-id></citation></ref>
<ref id="B4">
<label>4.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>L</given-names></name> <name><surname>Theodoropoulos</surname> <given-names>PC</given-names></name> <name><surname>Eskiocak</surname> <given-names>U</given-names></name> <name><surname>Wang</surname> <given-names>W</given-names></name> <name><surname>Moon</surname> <given-names>YA</given-names></name> <name><surname>Posner</surname> <given-names>B</given-names></name> <etal/></person-group>. <article-title>Selective targeting of mutant adenomatous polyposis coli (APC) in colorectal cancer</article-title>. <source>Sci Transl Med</source>. (<year>2016</year>) <volume>8</volume>:<fpage>361ra140</fpage>. <pub-id pub-id-type="doi">10.1126/scitranslmed.aaf8127</pub-id><pub-id pub-id-type="pmid">27798265</pub-id></citation></ref>
<ref id="B5">
<label>5.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sender</surname> <given-names>R</given-names></name> <name><surname>Fuchs</surname> <given-names>S</given-names></name> <name><surname>Milo</surname> <given-names>R</given-names></name></person-group>. <article-title>Revised estimates for the number of human and bacteria cells in the body</article-title>. <source>PLoS Biol</source>. (<year>2016</year>) <volume>14</volume>:<fpage>e1002533</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pbio.1002533</pub-id><pub-id pub-id-type="pmid">27541692</pub-id></citation></ref>
<ref id="B6">
<label>6.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thursby</surname> <given-names>E</given-names></name> <name><surname>Juge</surname> <given-names>N</given-names></name></person-group>. <article-title>Introduction to the human gut microbiota</article-title>. <source>Biochem J</source>. (<year>2017</year>) <volume>474</volume>:<fpage>1823</fpage>&#x02013;<lpage>36</lpage>. <pub-id pub-id-type="doi">10.1042/BCJ20160510</pub-id><pub-id pub-id-type="pmid">28512250</pub-id></citation></ref>
<ref id="B7">
<label>7.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Valdes</surname> <given-names>AM</given-names></name> <name><surname>Walter</surname> <given-names>J</given-names></name> <name><surname>Segal</surname> <given-names>E</given-names></name> <name><surname>Spector</surname> <given-names>TD</given-names></name></person-group>. <article-title>Role of the gut microbiota in nutrition and health</article-title>. <source>BMJ</source>. (<year>2018</year>) <volume>361</volume>:<fpage>k2179</fpage>. <pub-id pub-id-type="doi">10.1136/bmj.k2179</pub-id><pub-id pub-id-type="pmid">29899036</pub-id></citation></ref>
<ref id="B8">
<label>8.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kahrstrom</surname> <given-names>CT</given-names></name> <name><surname>Pariente</surname> <given-names>N</given-names></name> <name><surname>Weiss</surname> <given-names>U</given-names></name></person-group>. <article-title>Intestinal microbiota in health and disease</article-title>. <source>Nature</source>. (<year>2016</year>) <volume>535</volume>:<fpage>47</fpage>. <pub-id pub-id-type="doi">10.1038/535047a</pub-id><pub-id pub-id-type="pmid">27383978</pub-id></citation></ref>
<ref id="B9">
<label>9.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wroblewski</surname> <given-names>LE</given-names></name> <name><surname>Peek</surname> <given-names>RM</given-names> <suffix>Jr</suffix></name> <name><surname>Coburn</surname> <given-names>LA</given-names></name></person-group>. <article-title>The role of the microbiome in gastrointestinal cancer</article-title>. <source>Gastroenterol Clin North Am</source>. (<year>2016</year>) <volume>45</volume>:<fpage>543</fpage>&#x02013;<lpage>56</lpage>. <pub-id pub-id-type="doi">10.1016/j.gtc.2016.04.010</pub-id><pub-id pub-id-type="pmid">27546848</pub-id></citation></ref>
<ref id="B10">
<label>10.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wong</surname> <given-names>SH</given-names></name> <name><surname>Yu</surname> <given-names>J</given-names></name></person-group>. <article-title>Gut microbiota in colorectal cancer: mechanisms of action and clinical applications</article-title>. <source>Nat Rev Gastroenterol Hepatol</source>. (<year>2019</year>) <volume>16</volume>:<fpage>690</fpage>&#x02013;<lpage>704</lpage>. <pub-id pub-id-type="doi">10.1038/s41575-019-0209-8</pub-id><pub-id pub-id-type="pmid">31554963</pub-id></citation></ref>
<ref id="B11">
<label>11.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ng</surname> <given-names>C</given-names></name> <name><surname>Li</surname> <given-names>H</given-names></name> <name><surname>Wu</surname> <given-names>WKK</given-names></name> <name><surname>Wong</surname> <given-names>SH</given-names></name> <name><surname>Yu</surname> <given-names>J</given-names></name></person-group>. <article-title>Genomics and metagenomics of colorectal cancer</article-title>. <source>J Gastrointest Oncol</source>. (<year>2019</year>) <volume>10</volume>:<fpage>1164</fpage>&#x02013;<lpage>70</lpage>. <pub-id pub-id-type="doi">10.21037/jgo.2019.06.04</pub-id><pub-id pub-id-type="pmid">31949936</pub-id></citation></ref>
<ref id="B12">
<label>12.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rahman</surname> <given-names>MM</given-names></name> <name><surname>McFadden</surname> <given-names>G</given-names></name></person-group>. <article-title>Modulation of NF-&#x003BA;B signalling by microbial pathogens</article-title>. <source>Nat Rev Microbiol</source>. (<year>2011</year>) <volume>9</volume>:<fpage>291</fpage>&#x02013;<lpage>306</lpage>. <pub-id pub-id-type="doi">10.1038/nrmicro2539</pub-id><pub-id pub-id-type="pmid">21383764</pub-id></citation></ref>
<ref id="B13">
<label>13.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Taniguchi</surname> <given-names>K</given-names></name> <name><surname>Karin</surname> <given-names>M</given-names></name></person-group>. <article-title>NF-&#x003BA;B, inflammation, immunity and cancer: coming of age</article-title>. <source>Nat Rev Immunol</source>. (<year>2018</year>) <volume>18</volume>:<fpage>309</fpage>&#x02013;<lpage>24</lpage>. <pub-id pub-id-type="doi">10.1038/nri.2017.142</pub-id><pub-id pub-id-type="pmid">29379212</pub-id></citation></ref>
<ref id="B14">
<label>14.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>T</given-names></name> <name><surname>Zhang</surname> <given-names>L</given-names></name> <name><surname>Joo</surname> <given-names>D</given-names></name> <name><surname>Sun</surname> <given-names>SC</given-names></name></person-group>. <article-title>NF-&#x003BA;B signaling in inflammation</article-title>. <source>Signal Transduct Target Ther</source>. (<year>2017</year>) <volume>2</volume>:<fpage>17023</fpage>. <pub-id pub-id-type="doi">10.1038/sigtrans.2017.23</pub-id></citation></ref>
<ref id="B15">
<label>15.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Napetschnig</surname> <given-names>J</given-names></name> <name><surname>Wu</surname> <given-names>H</given-names></name></person-group>. <article-title>Molecular basis of NF-&#x003BA;B signaling</article-title>. <source>Annu Rev Biophys</source>. (<year>2013</year>) <volume>42</volume>:<fpage>443</fpage>&#x02013;<lpage>68</lpage>. <pub-id pub-id-type="doi">10.1146/annurev-biophys-083012-130338</pub-id><pub-id pub-id-type="pmid">23495970</pub-id></citation></ref>
<ref id="B16">
<label>16.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hoesel</surname> <given-names>B</given-names></name> <name><surname>Schmid</surname> <given-names>JA</given-names></name></person-group>. <article-title>The complexity of NF-&#x003BA;B signaling in inflammation and cancer</article-title>. <source>Mol Cancer</source>. (<year>2013</year>) <volume>12</volume>:<fpage>86</fpage>. <pub-id pub-id-type="doi">10.1186/1476-4598-12-86</pub-id><pub-id pub-id-type="pmid">23915189</pub-id></citation></ref>
<ref id="B17">
<label>17.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Israel</surname> <given-names>A</given-names></name></person-group>. <article-title>The IKK complex, a central regulator of NF-&#x003BA;B activation</article-title>. <source>Cold Spring Harb Perspect Biol</source>. (<year>2010</year>) <volume>2</volume>:<fpage>a000158</fpage>. <pub-id pub-id-type="doi">10.1101/cshperspect.a000158</pub-id><pub-id pub-id-type="pmid">20300203</pub-id></citation></ref>
<ref id="B18">
<label>18.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Winston</surname> <given-names>JT</given-names></name> <name><surname>Strack</surname> <given-names>P</given-names></name> <name><surname>Beer-Romero</surname> <given-names>P</given-names></name> <name><surname>Chu</surname> <given-names>CY</given-names></name> <name><surname>Elledge</surname> <given-names>SJ</given-names></name> <name><surname>Harper</surname> <given-names>JW</given-names></name></person-group>. <article-title>The SCFbeta-TRCP-ubiquitin ligase complex associates specifically with phosphorylated destruction motifs in I&#x003BA;Balpha and beta-catenin and stimulates I&#x003BA;Balpha ubiquitination <italic>in vitro</italic></article-title>. <source>Genes Dev</source>. (<year>1999</year>) <volume>13</volume>:<fpage>270</fpage>&#x02013;<lpage>83</lpage>. <pub-id pub-id-type="doi">10.1101/gad.13.3.270</pub-id><pub-id pub-id-type="pmid">9990852</pub-id></citation></ref>
<ref id="B19">
<label>19.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brown</surname> <given-names>K</given-names></name> <name><surname>Gerstberger</surname> <given-names>S</given-names></name> <name><surname>Carlson</surname> <given-names>L</given-names></name> <name><surname>Franzoso</surname> <given-names>G</given-names></name> <name><surname>Siebenlist</surname> <given-names>U</given-names></name></person-group>. <article-title>Control of I &#x003BA; B-alpha proteolysis by site-specific, signal-induced phosphorylation</article-title>. <source>Science</source>. (<year>1995</year>) <volume>267</volume>:<fpage>1485</fpage>&#x02013;<lpage>8</lpage>. <pub-id pub-id-type="doi">10.1126/science.7878466</pub-id><pub-id pub-id-type="pmid">7878466</pub-id></citation></ref>
<ref id="B20">
<label>20.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Oeckinghaus</surname> <given-names>A</given-names></name> <name><surname>Hayden</surname> <given-names>MS</given-names></name> <name><surname>Ghosh</surname> <given-names>S</given-names></name></person-group>. <article-title>Crosstalk in NF-&#x003BA;B signaling pathways</article-title>. <source>Nat Immunol</source>. (<year>2011</year>) <volume>12</volume>:<fpage>695</fpage>&#x02013;<lpage>708</lpage>. <pub-id pub-id-type="doi">10.1038/ni.2065</pub-id><pub-id pub-id-type="pmid">21772278</pub-id></citation></ref>
<ref id="B21">
<label>21.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cildir</surname> <given-names>G</given-names></name> <name><surname>Low</surname> <given-names>KC</given-names></name> <name><surname>Tergaonkar</surname> <given-names>V</given-names></name></person-group>. <article-title>Non-canonical NF-&#x003BA;B signaling in health and disease</article-title>. <source>Trends Mol Med</source>. (<year>2016</year>) <volume>22</volume>:<fpage>414</fpage>&#x02013;<lpage>29</lpage>. <pub-id pub-id-type="doi">10.1016/j.molmed.2016.03.002</pub-id><pub-id pub-id-type="pmid">27068135</pub-id></citation></ref>
<ref id="B22">
<label>22.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Senftleben</surname> <given-names>U</given-names></name> <name><surname>Cao</surname> <given-names>Y</given-names></name> <name><surname>Xiao</surname> <given-names>G</given-names></name> <name><surname>Greten</surname> <given-names>FR</given-names></name> <name><surname>Krahn</surname> <given-names>G</given-names></name> <name><surname>Bonizzi</surname> <given-names>G</given-names></name> <etal/></person-group>. <article-title>Activation by IKKalpha of a second, evolutionary conserved, NF-&#x003BA; B signaling pathway</article-title>. <source>Science</source>. (<year>2001</year>) <volume>293</volume>:<fpage>1495</fpage>&#x02013;<lpage>9</lpage>. <pub-id pub-id-type="doi">10.1126/science.1062677</pub-id><pub-id pub-id-type="pmid">11520989</pub-id></citation></ref>
<ref id="B23">
<label>23.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Maruyama</surname> <given-names>T</given-names></name> <name><surname>Fukushima</surname> <given-names>H</given-names></name> <name><surname>Nakao</surname> <given-names>K</given-names></name> <name><surname>Shin</surname> <given-names>M</given-names></name> <name><surname>Yasuda</surname> <given-names>H</given-names></name> <name><surname>Weih</surname> <given-names>F</given-names></name> <etal/></person-group>. <article-title>Processing of the NF-&#x003BA; B2 precursor p100 to p52 is critical for RANKL-induced osteoclast differentiation</article-title>. <source>J Bone Miner Res</source>. (<year>2010</year>) <volume>25</volume>:<fpage>1058</fpage>&#x02013;<lpage>67</lpage>. <pub-id pub-id-type="doi">10.1359/jbmr.091032</pub-id><pub-id pub-id-type="pmid">19874202</pub-id></citation></ref>
<ref id="B24">
<label>24.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sun</surname> <given-names>SC</given-names></name></person-group>. <article-title>The non-canonical NF-&#x003BA;B pathway in immunity and inflammation</article-title>. <source>Nat Rev Immunol</source>. (<year>2017</year>) <volume>17</volume>:<fpage>545</fpage>&#x02013;<lpage>58</lpage>. <pub-id pub-id-type="doi">10.1038/nri.2017.52</pub-id><pub-id pub-id-type="pmid">28580957</pub-id></citation></ref>
<ref id="B25">
<label>25.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sun</surname> <given-names>SC</given-names></name></person-group>. <article-title>The non-canonical NF-&#x003BA;B pathway</article-title>. <source>Immunol Rev</source>. (<year>2012</year>) <volume>246</volume>:<fpage>125</fpage>&#x02013;<lpage>40</lpage>. <pub-id pub-id-type="doi">10.1111/j.1600-065X.2011.01088.x</pub-id></citation></ref>
<ref id="B26">
<label>26.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Li</surname> <given-names>C</given-names></name> <name><surname>Wang</surname> <given-names>S</given-names></name> <name><surname>He</surname> <given-names>J</given-names></name></person-group>. <article-title>The two NF-&#x003BA;B pathways regulating bacterial and WSSV infection of shrimp</article-title>. <source>Front Immunol</source>. (<year>2019</year>) <volume>10</volume>:<fpage>1785</fpage>. <pub-id pub-id-type="doi">10.3389/fimmu.2019.01785</pub-id><pub-id pub-id-type="pmid">31417561</pub-id></citation></ref>
<ref id="B27">
<label>27.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hayden</surname> <given-names>MS</given-names></name> <name><surname>Ghosh</surname> <given-names>S</given-names></name></person-group>. <article-title>NF-&#x003BA;B in immunobiology</article-title>. <source>Cell Res</source>. (<year>2011</year>) <volume>21</volume>:<fpage>223</fpage>&#x02013;<lpage>44</lpage>. <pub-id pub-id-type="doi">10.1038/cr.2011.13</pub-id><pub-id pub-id-type="pmid">21243012</pub-id></citation></ref>
<ref id="B28">
<label>28.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ganesan</surname> <given-names>S</given-names></name> <name><surname>Aggarwal</surname> <given-names>K</given-names></name> <name><surname>Paquette</surname> <given-names>N</given-names></name> <name><surname>Silverman</surname> <given-names>N</given-names></name></person-group>. <article-title>NF-&#x003BA;B/Rel proteins and the humoral immune responses of Drosophila melanogaster</article-title>. <source>Curr Top Microbiol Immunol</source>. (<year>2011</year>) <volume>349</volume>:<fpage>25</fpage>&#x02013;<lpage>60</lpage>. <pub-id pub-id-type="doi">10.1007/82_2010_107</pub-id><pub-id pub-id-type="pmid">20852987</pub-id></citation></ref>
<ref id="B29">
<label>29.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>DiDonato</surname> <given-names>JA</given-names></name> <name><surname>Mercurio</surname> <given-names>F</given-names></name> <name><surname>Karin</surname> <given-names>M</given-names></name></person-group>. <article-title>NF-&#x003BA;B and the link between inflammation and cancer</article-title>. <source>Immunol Rev</source>. (<year>2012</year>) <volume>246</volume>:<fpage>379</fpage>&#x02013;<lpage>400</lpage>. <pub-id pub-id-type="doi">10.1111/j.1600-065X.2012.01099.x</pub-id><pub-id pub-id-type="pmid">22435567</pub-id></citation></ref>
<ref id="B30">
<label>30.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhai</surname> <given-names>Z</given-names></name> <name><surname>Boquete</surname> <given-names>JP</given-names></name> <name><surname>Lemaitre</surname> <given-names>B</given-names></name></person-group>. <article-title>Cell-specific Imd-NF-&#x003BA;B responses enable simultaneous antibacterial immunity and intestinal epithelial cell shedding upon bacterial infection</article-title>. <source>Immunity</source>. (<year>2018</year>) <volume>48</volume>:<fpage>897</fpage>&#x02013;<lpage>910.e897</lpage>. <pub-id pub-id-type="doi">10.1016/j.immuni.2018.04.010</pub-id><pub-id pub-id-type="pmid">29752064</pub-id></citation></ref>
<ref id="B31">
<label>31.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>Q</given-names></name> <name><surname>Lenardo</surname> <given-names>MJ</given-names></name> <name><surname>Baltimore</surname> <given-names>D</given-names></name></person-group>. <article-title>30 years of NF-&#x003BA;B: a blossoming of relevance to human pathobiology</article-title>. <source>Cell.</source> (<year>2017</year>) <volume>168</volume>:<fpage>37</fpage>&#x02013;<lpage>57</lpage>. <pub-id pub-id-type="doi">10.1016/j.cell.2016.12.012</pub-id><pub-id pub-id-type="pmid">28086098</pub-id></citation></ref>
<ref id="B32">
<label>32.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xia</surname> <given-names>Y</given-names></name> <name><surname>Shen</surname> <given-names>S</given-names></name> <name><surname>Verma</surname> <given-names>IM</given-names></name></person-group>. <article-title>NF-&#x003BA;B, an active player in human cancers</article-title>. <source>Cancer Immunol Res</source>. (<year>2014</year>) <volume>2</volume>:<fpage>823</fpage>&#x02013;<lpage>30</lpage>. <pub-id pub-id-type="doi">10.1158/2326-6066.CIR-14-0112</pub-id><pub-id pub-id-type="pmid">25187272</pub-id></citation></ref>
<ref id="B33">
<label>33.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dai</surname> <given-names>W</given-names></name> <name><surname>Wu</surname> <given-names>J</given-names></name> <name><surname>Wang</surname> <given-names>D</given-names></name> <name><surname>Wang</surname> <given-names>J</given-names></name></person-group>. <article-title>Cancer gene therapy by NF-&#x003BA;B-activated cancer cell-specific expression of CRISPR/Cas9 targeting telomeres</article-title>. <source>Gene Ther.</source> (<year>2020</year>). <pub-id pub-id-type="doi">10.1038/s41434-020-0128-x</pub-id><pub-id pub-id-type="pmid">32034293</pub-id>. [Epub ahead of print].</citation></ref>
<ref id="B34">
<label>34.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Inoue</surname> <given-names>S</given-names></name> <name><surname>Ide</surname> <given-names>H</given-names></name> <name><surname>Mizushima</surname> <given-names>T</given-names></name> <name><surname>Jiang</surname> <given-names>G</given-names></name> <name><surname>Netto</surname> <given-names>GJ</given-names></name> <name><surname>Gotoh</surname> <given-names>M</given-names></name> <etal/></person-group>. <article-title>Nuclear factor-&#x003BA;B promotes urothelial tumorigenesis and cancer progression via cooperation with androgen receptor signaling</article-title>. <source>Mol Cancer Ther</source>. (<year>2018</year>) <volume>17</volume>:<fpage>1303</fpage>&#x02013;<lpage>14</lpage>. <pub-id pub-id-type="doi">10.1158/1535-7163.MCT-17-0786</pub-id><pub-id pub-id-type="pmid">29592878</pub-id></citation></ref>
<ref id="B35">
<label>35.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname> <given-names>JR</given-names></name> <name><surname>Xu</surname> <given-names>GM</given-names></name> <name><surname>Shi</surname> <given-names>XM</given-names></name> <name><surname>Zhang</surname> <given-names>GJ</given-names></name></person-group>. <article-title>Low temperature plasma promoting fibroblast proliferation by activating the NF-&#x003BA;B pathway and increasing cyclinD1 expression</article-title>. <source>Sci Rep</source>. (<year>2017</year>) <volume>7</volume>:<fpage>11698</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-017-12043-w</pub-id><pub-id pub-id-type="pmid">28916796</pub-id></citation></ref>
<ref id="B36">
<label>36.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Buchholz</surname> <given-names>TA</given-names></name> <name><surname>Garg</surname> <given-names>AK</given-names></name> <name><surname>Chakravarti</surname> <given-names>N</given-names></name> <name><surname>Aggarwal</surname> <given-names>BB</given-names></name> <name><surname>Esteva</surname> <given-names>FJ</given-names></name> <name><surname>Kuerer</surname> <given-names>HM</given-names></name> <etal/></person-group>. <article-title>The nuclear transcription factor &#x003BA;B/bcl-2 pathway correlates with pathologic complete response to doxorubicin-based neoadjuvant chemotherapy in human breast cancer</article-title>. <source>Clin Cancer Res</source>. (<year>2005</year>) <volume>11</volume>:<fpage>8398</fpage>&#x02013;<lpage>402</lpage>. <pub-id pub-id-type="doi">10.1158/1078-0432.CCR-05-0885</pub-id><pub-id pub-id-type="pmid">16322301</pub-id></citation></ref>
<ref id="B37">
<label>37.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ji</surname> <given-names>Z</given-names></name> <name><surname>He</surname> <given-names>L</given-names></name> <name><surname>Regev</surname> <given-names>A</given-names></name> <name><surname>Struhl</surname> <given-names>K</given-names></name></person-group>. <article-title>Inflammatory regulatory network mediated by the joint action of NF-kB, STAT3, and AP-1 factors is involved in many human cancers</article-title>. <source>Proc Natl Acad Sci USA</source>. (<year>2019</year>) <volume>116</volume>:<fpage>9453</fpage>&#x02013;<lpage>62</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1821068116</pub-id><pub-id pub-id-type="pmid">30910960</pub-id></citation></ref>
<ref id="B38">
<label>38.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Marshall</surname> <given-names>BJ</given-names></name> <name><surname>Warren</surname> <given-names>JR</given-names></name></person-group>. <article-title>Unidentified curved bacilli in the stomach of patients with gastritis and peptic ulceration</article-title>. <source>Lancet</source>. (<year>1984</year>) <volume>1</volume>:<fpage>1311</fpage>&#x02013;<lpage>5</lpage>. <pub-id pub-id-type="doi">10.1016/S0140-6736(84)91816-6</pub-id><pub-id pub-id-type="pmid">6145023</pub-id></citation></ref>
<ref id="B39">
<label>39.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jones</surname> <given-names>MD</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Zamble</surname> <given-names>DB</given-names></name></person-group>. <article-title>Acid-responsive activity of the Helicobacter pylori metalloregulator NikR</article-title>. <source>Proc Natl Acad Sci USA</source>. (<year>2018</year>) <volume>115</volume>:<fpage>8966</fpage>&#x02013;<lpage>71</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1808393115</pub-id><pub-id pub-id-type="pmid">30126985</pub-id></citation></ref>
<ref id="B40">
<label>40.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hooi</surname> <given-names>JKY</given-names></name> <name><surname>Lai</surname> <given-names>WY</given-names></name> <name><surname>Ng</surname> <given-names>WK</given-names></name> <name><surname>Suen</surname> <given-names>MMY</given-names></name> <name><surname>Underwood</surname> <given-names>FE</given-names></name> <name><surname>Tanyingoh</surname> <given-names>D</given-names></name> <etal/></person-group>. <article-title>Global prevalence of helicobacter pylori infection: systematic review and meta-analysis</article-title>. <source>Gastroenterology</source>. (<year>2017</year>) <volume>153</volume>:<fpage>420</fpage>&#x02013;<lpage>9</lpage>. <pub-id pub-id-type="doi">10.1053/j.gastro.2017.04.022</pub-id><pub-id pub-id-type="pmid">28456631</pub-id></citation></ref>
<ref id="B41">
<label>41.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Correa</surname> <given-names>P</given-names></name> <name><surname>Piazuelo</surname> <given-names>MB</given-names></name></person-group>. <article-title>Helicobacter pylori infection and gastric adenocarcinoma</article-title>. <source>US Gastroenterol Hepatol Rev</source>. (<year>2011</year>) <volume>7</volume>:<fpage>59</fpage>&#x02013;<lpage>64</lpage>. <pub-id pub-id-type="pmid">21857882</pub-id></citation></ref>
<ref id="B42">
<label>42.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Li</surname> <given-names>WQ</given-names></name> <name><surname>Zhang</surname> <given-names>JY</given-names></name> <name><surname>Ma</surname> <given-names>JL</given-names></name> <name><surname>Li</surname> <given-names>ZX</given-names></name> <name><surname>Zhang</surname> <given-names>L</given-names></name> <name><surname>Zhang</surname> <given-names>Y</given-names></name> <etal/></person-group>. <article-title>Effects of Helicobacter pylori treatment and vitamin and garlic supplementation on gastric cancer incidence and mortality: follow-up of a randomized intervention trial</article-title>. <source>BMJ</source>. (<year>2019</year>) <volume>366</volume>:<fpage>l5016</fpage>. <pub-id pub-id-type="doi">10.1136/bmj.l5016</pub-id><pub-id pub-id-type="pmid">31511230</pub-id></citation></ref>
<ref id="B43">
<label>43.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Leung</surname> <given-names>WK</given-names></name> <name><surname>Wong</surname> <given-names>IOL</given-names></name> <name><surname>Cheung</surname> <given-names>KS</given-names></name> <name><surname>Yeung</surname> <given-names>KF</given-names></name> <name><surname>Chan</surname> <given-names>EW</given-names></name> <name><surname>Wong</surname> <given-names>AYS</given-names></name> <etal/></person-group>. <article-title>Effects of helicobacter pylori treatment on incidence of gastric cancer in older individuals</article-title>. <source>Gastroenterology</source>. (<year>2018</year>) <volume>155</volume>:<fpage>67</fpage>&#x02013;<lpage>75</lpage>. <pub-id pub-id-type="doi">10.1053/j.gastro.2018.03.028</pub-id><pub-id pub-id-type="pmid">29550592</pub-id></citation></ref>
<ref id="B44">
<label>44.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Choi</surname> <given-names>IJ</given-names></name> <name><surname>Kook</surname> <given-names>MC</given-names></name> <name><surname>Kim</surname> <given-names>YI</given-names></name> <name><surname>Cho</surname> <given-names>SJ</given-names></name> <name><surname>Lee</surname> <given-names>JY</given-names></name> <name><surname>Kim</surname> <given-names>CG</given-names></name> <etal/></person-group>. <article-title>Helicobacter pylori therapy for the prevention of metachronous gastric cancer</article-title>. <source>N Engl J Med</source>. (<year>2018</year>) <volume>378</volume>:<fpage>1085</fpage>&#x02013;<lpage>95</lpage>. <pub-id pub-id-type="doi">10.1056/NEJMoa1708423</pub-id><pub-id pub-id-type="pmid">29562147</pub-id></citation></ref>
<ref id="B45">
<label>45.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Choi</surname> <given-names>IJ</given-names></name> <name><surname>Kim</surname> <given-names>CG</given-names></name> <name><surname>Lee</surname> <given-names>JY</given-names></name> <name><surname>Kim</surname> <given-names>YI</given-names></name> <name><surname>Kook</surname> <given-names>MC</given-names></name> <name><surname>Park</surname> <given-names>B</given-names></name> <etal/></person-group>. <article-title>Family history of gastric cancer and helicobacter pylori treatment</article-title>. <source>N Engl J Med</source>. (<year>2020</year>) <volume>382</volume>:<fpage>427</fpage>&#x02013;<lpage>36</lpage>. <pub-id pub-id-type="doi">10.1056/NEJMoa1909666</pub-id></citation></ref>
<ref id="B46">
<label>46.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Holcombe</surname> <given-names>C</given-names></name></person-group>. <article-title>Helicobacter pylori: the African enigma</article-title>. <source>Gut</source>. (<year>1992</year>) <volume>33</volume>:<fpage>429</fpage>&#x02013;<lpage>31</lpage>. <pub-id pub-id-type="doi">10.1136/gut.33.4.429</pub-id><pub-id pub-id-type="pmid">1582581</pub-id></citation></ref>
<ref id="B47">
<label>47.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Peng</surname> <given-names>C</given-names></name> <name><surname>Li</surname> <given-names>NS</given-names></name> <name><surname>Hu</surname> <given-names>Y</given-names></name> <name><surname>Lu</surname> <given-names>NH</given-names></name></person-group>. <article-title>Impact factors that modulate gastric cancer risk in Helicobacter pylori-infected rodent models</article-title>. <source>Helicobacter</source>. (<year>2019</year>) <volume>24</volume>:<fpage>e12580</fpage>. <pub-id pub-id-type="doi">10.1111/hel.12580</pub-id><pub-id pub-id-type="pmid">30950162</pub-id></citation></ref>
<ref id="B48">
<label>48.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hatakeyama</surname> <given-names>M</given-names></name></person-group>. <article-title>Helicobacter pylori CagA and gastric cancer: a paradigm for hit-and-run carcinogenesis</article-title>. <source>Cell Host Microbe</source>. (<year>2014</year>) <volume>15</volume>:<fpage>306</fpage>&#x02013;<lpage>16</lpage>. <pub-id pub-id-type="doi">10.1016/j.chom.2014.02.008</pub-id><pub-id pub-id-type="pmid">24629337</pub-id></citation></ref>
<ref id="B49">
<label>49.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brandt</surname> <given-names>S</given-names></name> <name><surname>Kwok</surname> <given-names>T</given-names></name> <name><surname>Hartig</surname> <given-names>R</given-names></name> <name><surname>Konig</surname> <given-names>W</given-names></name> <name><surname>Backert</surname> <given-names>S</given-names></name></person-group>. <article-title>NF-&#x003BA;B activation and potentiation of proinflammatory responses by the Helicobacter pylori CagA protein</article-title>. <source>Proc Natl Acad Sci USA</source>. (<year>2005</year>) <volume>102</volume>:<fpage>9300</fpage>&#x02013;<lpage>5</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.0409873102</pub-id><pub-id pub-id-type="pmid">15972330</pub-id></citation></ref>
<ref id="B50">
<label>50.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>McClain</surname> <given-names>MS</given-names></name> <name><surname>Beckett</surname> <given-names>AC</given-names></name> <name><surname>Cover</surname> <given-names>TL</given-names></name></person-group>. <article-title>Helicobacter pylori vacuolating toxin and gastric cancer</article-title>. <source>Toxins (Basel)</source>. (<year>2017</year>) <volume>9</volume>:<fpage>316</fpage>. <pub-id pub-id-type="doi">10.3390/toxins9100316</pub-id><pub-id pub-id-type="pmid">29023421</pub-id></citation></ref>
<ref id="B51">
<label>51.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>El-Omar</surname> <given-names>EM</given-names></name> <name><surname>Rabkin</surname> <given-names>CS</given-names></name> <name><surname>Gammon</surname> <given-names>MD</given-names></name> <name><surname>Vaughan</surname> <given-names>TL</given-names></name> <name><surname>Risch</surname> <given-names>HA</given-names></name> <name><surname>Schoenberg</surname> <given-names>JB</given-names></name> <etal/></person-group>. <article-title>Increased risk of noncardia gastric cancer associated with proinflammatory cytokine gene polymorphisms</article-title>. <source>Gastroenterology</source>. (<year>2003</year>) <volume>124</volume>:<fpage>1193</fpage>&#x02013;<lpage>201</lpage>. <pub-id pub-id-type="doi">10.1016/S0016-5085(03)00157-4</pub-id><pub-id pub-id-type="pmid">12730860</pub-id></citation></ref>
<ref id="B52">
<label>52.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ames</surname> <given-names>NJ</given-names></name> <name><surname>Ranucci</surname> <given-names>A</given-names></name> <name><surname>Moriyama</surname> <given-names>B</given-names></name> <name><surname>Wallen</surname> <given-names>GR</given-names></name></person-group>. <article-title>The human microbiome and understanding the 16S rRNA gene in translational nursing science</article-title>. <source>Nurs Res</source>. (<year>2017</year>) <volume>66</volume>:<fpage>184</fpage>&#x02013;<lpage>97</lpage>. <pub-id pub-id-type="doi">10.1097/NNR.0000000000000212</pub-id><pub-id pub-id-type="pmid">28252578</pub-id></citation></ref>
<ref id="B53">
<label>53.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Noto</surname> <given-names>JM</given-names></name> <name><surname>Peek</surname> <given-names>RM</given-names> <suffix>Jr</suffix></name></person-group>. <article-title>The gastric microbiome, its interaction with Helicobacter pylori, and its potential role in the progression to stomach cancer</article-title>. <source>PLoS Pathog.</source> (<year>2017</year>) <volume>13</volume>:<fpage>e1006573</fpage>. <pub-id pub-id-type="doi">10.1371/journal.ppat.1006573</pub-id><pub-id pub-id-type="pmid">28982167</pub-id></citation></ref>
<ref id="B54">
<label>54.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ferreira</surname> <given-names>RM</given-names></name> <name><surname>Pereira-Marques</surname> <given-names>J</given-names></name> <name><surname>Pinto-Ribeiro</surname> <given-names>I</given-names></name> <name><surname>Costa</surname> <given-names>JL</given-names></name> <name><surname>Carneiro</surname> <given-names>F</given-names></name> <name><surname>Machado</surname> <given-names>JC</given-names></name> <etal/></person-group>. <article-title>Gastric microbial community profiling reveals a dysbiotic cancer-associated microbiota</article-title>. <source>Gut</source>. (<year>2018</year>) <volume>67</volume>:<fpage>226</fpage>&#x02013;<lpage>36</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2017-314205</pub-id><pub-id pub-id-type="pmid">29102920</pub-id></citation></ref>
<ref id="B55">
<label>55.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Coker</surname> <given-names>OO</given-names></name> <name><surname>Dai</surname> <given-names>Z</given-names></name> <name><surname>Nie</surname> <given-names>Y</given-names></name> <name><surname>Zhao</surname> <given-names>G</given-names></name> <name><surname>Cao</surname> <given-names>L</given-names></name> <name><surname>Nakatsu</surname> <given-names>G</given-names></name> <etal/></person-group>. <article-title>Mucosal microbiome dysbiosis in gastric carcinogenesis</article-title>. <source>Gut</source>. (<year>2018</year>) <volume>67</volume>:<fpage>1024</fpage>&#x02013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2017-314281</pub-id><pub-id pub-id-type="pmid">28765474</pub-id></citation></ref>
<ref id="B56">
<label>56.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Burkitt</surname> <given-names>MD</given-names></name> <name><surname>Duckworth</surname> <given-names>CA</given-names></name> <name><surname>Williams</surname> <given-names>JM</given-names></name> <name><surname>Pritchard</surname> <given-names>DM</given-names></name></person-group>. <article-title>Helicobacter pylori-induced gastric pathology: insights from <italic>in vivo</italic> and <italic>ex vivo</italic> models</article-title>. <source>Dis Model Mech</source>. (<year>2017</year>) <volume>10</volume>:<fpage>89</fpage>&#x02013;<lpage>104</lpage>. <pub-id pub-id-type="doi">10.1242/dmm.027649</pub-id><pub-id pub-id-type="pmid">28151409</pub-id></citation></ref>
<ref id="B57">
<label>57.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lertpiriyapong</surname> <given-names>K</given-names></name> <name><surname>Whary</surname> <given-names>MT</given-names></name> <name><surname>Muthupalani</surname> <given-names>S</given-names></name> <name><surname>Lofgren</surname> <given-names>JL</given-names></name> <name><surname>Gamazon</surname> <given-names>ER</given-names></name> <name><surname>Feng</surname> <given-names>Y</given-names></name> <etal/></person-group>. <article-title>Gastric colonisation with a restricted commensal microbiota replicates the promotion of neoplastic lesions by diverse intestinal microbiota in the Helicobacter pylori INS-GAS mouse model of gastric carcinogenesis</article-title>. <source>Gut</source>. (<year>2014</year>) <volume>63</volume>:<fpage>54</fpage>&#x02013;<lpage>63</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2013-305178</pub-id><pub-id pub-id-type="pmid">23812323</pub-id></citation></ref>
<ref id="B58">
<label>58.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Espinoza</surname> <given-names>JL</given-names></name> <name><surname>Matsumoto</surname> <given-names>A</given-names></name> <name><surname>Tanaka</surname> <given-names>H</given-names></name> <name><surname>Matsumura</surname> <given-names>I</given-names></name></person-group>. <article-title>Gastric microbiota: an emerging player in Helicobacter pylori-induced gastric malignancies</article-title>. <source>Cancer Lett</source>. (<year>2018</year>) <volume>414</volume>:<fpage>147</fpage>&#x02013;<lpage>52</lpage>. <pub-id pub-id-type="doi">10.1016/j.canlet.2017.11.009</pub-id><pub-id pub-id-type="pmid">29138097</pub-id></citation></ref>
<ref id="B59">
<label>59.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pharoah</surname> <given-names>PD</given-names></name> <name><surname>Guilford</surname> <given-names>P</given-names></name> <name><surname>Caldas</surname> <given-names>C</given-names></name> <collab>International Gastric Cancer Linkage C</collab></person-group>. <article-title>Incidence of gastric cancer and breast cancer in CDH1 (E-cadherin) mutation carriers from hereditary diffuse gastric cancer families</article-title>. <source>Gastroenterology</source>. (<year>2001</year>) <volume>121</volume>:<fpage>1348</fpage>&#x02013;<lpage>53</lpage>. <pub-id pub-id-type="doi">10.1053/gast.2001.29611</pub-id><pub-id pub-id-type="pmid">11729114</pub-id></citation></ref>
<ref id="B60">
<label>60.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yang</surname> <given-names>P</given-names></name> <name><surname>Zhou</surname> <given-names>Y</given-names></name> <name><surname>Chen</surname> <given-names>B</given-names></name> <name><surname>Wan</surname> <given-names>HW</given-names></name> <name><surname>Jia</surname> <given-names>GQ</given-names></name> <name><surname>Bai</surname> <given-names>HL</given-names></name> <etal/></person-group>. <article-title>Overweight, obesity and gastric cancer risk: results from a meta-analysis of cohort studies</article-title>. <source>Eur J Cancer</source>. (<year>2009</year>) <volume>45</volume>:<fpage>2867</fpage>&#x02013;<lpage>73</lpage>. <pub-id pub-id-type="doi">10.1016/j.ejca.2009.04.019</pub-id><pub-id pub-id-type="pmid">19427197</pub-id></citation></ref>
<ref id="B61">
<label>61.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>He</surname> <given-names>C</given-names></name> <name><surname>Cheng</surname> <given-names>D</given-names></name> <name><surname>Peng</surname> <given-names>C</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Zhu</surname> <given-names>Y</given-names></name> <name><surname>Lu</surname> <given-names>N</given-names></name></person-group>. <article-title>High-fat diet induces dysbiosis of gastric microbiota prior to gut microbiota in association with metabolic disorders in mice</article-title>. <source>Front Microbiol</source>. (<year>2018</year>) <volume>9</volume>:<fpage>639</fpage>. <pub-id pub-id-type="doi">10.3389/fmicb.2018.00639</pub-id><pub-id pub-id-type="pmid">29686654</pub-id></citation></ref>
<ref id="B62">
<label>62.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Arita</surname> <given-names>S</given-names></name> <name><surname>Inagaki-Ohara</surname> <given-names>K</given-names></name></person-group>. <article-title>High-fat-diet-induced modulations of leptin signaling and gastric microbiota drive precancerous lesions in the stomach</article-title>. <source>Nutrition</source>. (<year>2019</year>) <volume>67&#x02013;68</volume>:<fpage>110556</fpage>. <pub-id pub-id-type="doi">10.1016/j.nut.2019.110556</pub-id><pub-id pub-id-type="pmid">31554603</pub-id></citation></ref>
<ref id="B63">
<label>63.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kho</surname> <given-names>ZY</given-names></name> <name><surname>Lal</surname> <given-names>SK</given-names></name></person-group>. <article-title>The human gut microbiome - a potential controller of wellness and disease</article-title>. <source>Front Microbiol</source>. (<year>2018</year>) <volume>9</volume>:<fpage>1835</fpage>. <pub-id pub-id-type="doi">10.3389/fmicb.2018.01835</pub-id><pub-id pub-id-type="pmid">30154767</pub-id></citation></ref>
<ref id="B64">
<label>64.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cani</surname> <given-names>PD</given-names></name></person-group>. <article-title>Human gut microbiome: hopes, threats and promises</article-title>. <source>Gut</source>. (<year>2018</year>) <volume>67</volume>:<fpage>1716</fpage>&#x02013;<lpage>25</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2018-316723</pub-id><pub-id pub-id-type="pmid">29934437</pub-id></citation></ref>
<ref id="B65">
<label>65.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rawla</surname> <given-names>P</given-names></name> <name><surname>Sunkara</surname> <given-names>T</given-names></name> <name><surname>Barsouk</surname> <given-names>A</given-names></name></person-group>. <article-title>Epidemiology of colorectal cancer: incidence, mortality, survival, and risk factors</article-title>. <source>Prz Gastroenterol</source>. (<year>2019</year>) <volume>14</volume>:<fpage>89</fpage>&#x02013;<lpage>103</lpage>. <pub-id pub-id-type="doi">10.5114/pg.2018.81072</pub-id><pub-id pub-id-type="pmid">31616522</pub-id></citation></ref>
<ref id="B66">
<label>66.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wong</surname> <given-names>SH</given-names></name> <name><surname>Zhao</surname> <given-names>L</given-names></name> <name><surname>Zhang</surname> <given-names>X</given-names></name> <name><surname>Nakatsu</surname> <given-names>G</given-names></name> <name><surname>Han</surname> <given-names>J</given-names></name> <name><surname>Xu</surname> <given-names>W</given-names></name> <etal/></person-group>. <article-title>Gavage of fecal samples from patients with colorectal cancer promotes intestinal carcinogenesis in germ-free and conventional mice</article-title>. <source>Gastroenterology.</source> (<year>2017</year>) <volume>153</volume>:<fpage>1621</fpage>&#x02013;<lpage>33.e6</lpage>. <pub-id pub-id-type="doi">10.1053/j.gastro.2017.08.022</pub-id><pub-id pub-id-type="pmid">28823860</pub-id></citation></ref>
<ref id="B67">
<label>67.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname> <given-names>T</given-names></name> <name><surname>Cai</surname> <given-names>G</given-names></name> <name><surname>Qiu</surname> <given-names>Y</given-names></name> <name><surname>Fei</surname> <given-names>N</given-names></name> <name><surname>Zhang</surname> <given-names>M</given-names></name> <name><surname>Pang</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers</article-title>. <source>ISME J</source>. (<year>2012</year>) <volume>6</volume>:<fpage>320</fpage>&#x02013;<lpage>9</lpage>. <pub-id pub-id-type="doi">10.1038/ismej.2011.109</pub-id></citation></ref>
<ref id="B68">
<label>68.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ahn</surname> <given-names>J</given-names></name> <name><surname>Sinha</surname> <given-names>R</given-names></name> <name><surname>Pei</surname> <given-names>Z</given-names></name> <name><surname>Dominianni</surname> <given-names>C</given-names></name> <name><surname>Wu</surname> <given-names>J</given-names></name> <name><surname>Shi</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Human gut microbiome and risk for colorectal cancer</article-title>. <source>J Natl Cancer Inst</source>. (<year>2013</year>) <volume>105</volume>:<fpage>1907</fpage>&#x02013;<lpage>11</lpage>. <pub-id pub-id-type="doi">10.1093/jnci/djt300</pub-id><pub-id pub-id-type="pmid">24316595</pub-id></citation></ref>
<ref id="B69">
<label>69.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yu</surname> <given-names>J</given-names></name> <name><surname>Feng</surname> <given-names>Q</given-names></name> <name><surname>Wong</surname> <given-names>SH</given-names></name> <name><surname>Zhang</surname> <given-names>D</given-names></name> <name><surname>Liang</surname> <given-names>QY</given-names></name> <name><surname>Qin</surname> <given-names>Y</given-names></name> <etal/></person-group>. <article-title>Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer</article-title>. <source>Gut</source>. (<year>2017</year>) <volume>66</volume>:<fpage>70</fpage>&#x02013;<lpage>8</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2015-309800</pub-id><pub-id pub-id-type="pmid">26408641</pub-id></citation></ref>
<ref id="B70">
<label>70.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hibberd</surname> <given-names>AA</given-names></name> <name><surname>Lyra</surname> <given-names>A</given-names></name> <name><surname>Ouwehand</surname> <given-names>AC</given-names></name> <name><surname>Rolny</surname> <given-names>P</given-names></name> <name><surname>Lindegren</surname> <given-names>H</given-names></name> <name><surname>Cedgard</surname> <given-names>L</given-names></name> <etal/></person-group>. <article-title>Intestinal microbiota is altered in patients with colon cancer and modified by probiotic intervention</article-title>. <source>BMJ Open Gastroenterol</source>. (<year>2017</year>) <volume>4</volume>:<fpage>e000145</fpage>. <pub-id pub-id-type="doi">10.1136/bmjgast-2017-000145</pub-id><pub-id pub-id-type="pmid">28944067</pub-id></citation></ref>
<ref id="B71">
<label>71.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nakatsu</surname> <given-names>G</given-names></name> <name><surname>Li</surname> <given-names>X</given-names></name> <name><surname>Zhou</surname> <given-names>H</given-names></name> <name><surname>Sheng</surname> <given-names>J</given-names></name> <name><surname>Wong</surname> <given-names>SH</given-names></name> <name><surname>Wu</surname> <given-names>WK</given-names></name> <etal/></person-group>. <article-title>Gut mucosal microbiome across stages of colorectal carcinogenesis</article-title>. <source>Nat Commun</source>. (<year>2015</year>) <volume>6</volume>:<fpage>8727</fpage>. <pub-id pub-id-type="doi">10.1038/ncomms9727</pub-id><pub-id pub-id-type="pmid">26515465</pub-id></citation></ref>
<ref id="B72">
<label>72.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Warren</surname> <given-names>RL</given-names></name> <name><surname>Freeman</surname> <given-names>DJ</given-names></name> <name><surname>Pleasance</surname> <given-names>S</given-names></name> <name><surname>Watson</surname> <given-names>P</given-names></name> <name><surname>Moore</surname> <given-names>RA</given-names></name> <name><surname>Cochrane</surname> <given-names>K</given-names></name> <etal/></person-group>. <article-title>Co-occurrence of anaerobic bacteria in colorectal carcinomas</article-title>. <source>Microbiome</source>. (<year>2013</year>) <volume>1</volume>:<fpage>16</fpage>. <pub-id pub-id-type="doi">10.1186/2049-2618-1-16</pub-id><pub-id pub-id-type="pmid">24450771</pub-id></citation></ref>
<ref id="B73">
<label>73.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mima</surname> <given-names>K</given-names></name> <name><surname>Nishihara</surname> <given-names>R</given-names></name> <name><surname>Qian</surname> <given-names>ZR</given-names></name> <name><surname>Cao</surname> <given-names>Y</given-names></name> <name><surname>Sukawa</surname> <given-names>Y</given-names></name> <name><surname>Nowak</surname> <given-names>JA</given-names></name> <etal/></person-group>. <article-title>Fusobacterium nucleatum in colorectal carcinoma tissue and patient prognosis</article-title>. <source>Gut</source>. (<year>2016</year>) <volume>65</volume>:<fpage>1973</fpage>&#x02013;<lpage>1980</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2015-310101</pub-id><pub-id pub-id-type="pmid">26311717</pub-id></citation></ref>
<ref id="B74">
<label>74.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brennan</surname> <given-names>CA</given-names></name> <name><surname>Garrett</surname> <given-names>WS</given-names></name></person-group>. <article-title>Fusobacterium nucleatum - symbiont, opportunist and oncobacterium</article-title>. <source>Nat Rev Microbiol</source>. (<year>2019</year>) <volume>17</volume>:<fpage>156</fpage>&#x02013;<lpage>66</lpage>. <pub-id pub-id-type="doi">10.1038/s41579-018-0129-6</pub-id><pub-id pub-id-type="pmid">30546113</pub-id></citation></ref>
<ref id="B75">
<label>75.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yu</surname> <given-names>T</given-names></name> <name><surname>Guo</surname> <given-names>F</given-names></name> <name><surname>Yu</surname> <given-names>Y</given-names></name> <name><surname>Sun</surname> <given-names>T</given-names></name> <name><surname>Ma</surname> <given-names>D</given-names></name> <name><surname>Han</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Fusobacterium nucleatum promotes chemoresistance to colorectal cancer by modulating autophagy</article-title>. <source>Cell</source>. (<year>2017</year>) <volume>170</volume>:<fpage>548</fpage>&#x02013;<lpage>63.e16</lpage>. <pub-id pub-id-type="doi">10.1016/j.cell.2017.07.008</pub-id><pub-id pub-id-type="pmid">28753429</pub-id></citation></ref>
<ref id="B76">
<label>76.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wassenaar</surname> <given-names>TM</given-names></name></person-group>. <article-title><italic>E. coli</italic> and colorectal cancer: a complex relationship that deserves a critical mindset</article-title>. <source>Crit Rev Microbiol</source>. (<year>2018</year>) <volume>44</volume>:<fpage>619</fpage>&#x02013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.1080/1040841X.2018.1481013</pub-id><pub-id pub-id-type="pmid">29909724</pub-id></citation></ref>
<ref id="B77">
<label>77.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mirsepasi-Lauridsen</surname> <given-names>HC</given-names></name> <name><surname>Vallance</surname> <given-names>BA</given-names></name> <name><surname>Krogfelt</surname> <given-names>KA</given-names></name> <name><surname>Petersen</surname> <given-names>AM</given-names></name></person-group>. <article-title><italic>Escherichia coli</italic> pathobionts associated with inflammatory bowel disease</article-title>. <source>Clin Microbiol Rev</source>. (<year>2019</year>) <volume>32</volume>:<fpage>e00060</fpage>&#x02013;<lpage>18</lpage>. <pub-id pub-id-type="doi">10.1128/CMR.00060-18</pub-id><pub-id pub-id-type="pmid">30700431</pub-id></citation></ref>
<ref id="B78">
<label>78.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bonnet</surname> <given-names>M</given-names></name> <name><surname>Buc</surname> <given-names>E</given-names></name> <name><surname>Sauvanet</surname> <given-names>P</given-names></name> <name><surname>Darcha</surname> <given-names>C</given-names></name> <name><surname>Dubois</surname> <given-names>D</given-names></name> <name><surname>Pereira</surname> <given-names>B</given-names></name> <etal/></person-group>. <article-title>Colonization of the human gut by <italic>E. coli</italic> and colorectal cancer risk</article-title>. <source>Clin Cancer Res</source>. (<year>2014</year>) <volume>20</volume>:<fpage>859</fpage>&#x02013;<lpage>67</lpage>. <pub-id pub-id-type="doi">10.1158/1078-0432.CCR-13-1343</pub-id><pub-id pub-id-type="pmid">24334760</pub-id></citation></ref>
<ref id="B79">
<label>79.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cuevas-Ramos</surname> <given-names>G</given-names></name> <name><surname>Petit</surname> <given-names>CR</given-names></name> <name><surname>Marcq</surname> <given-names>I</given-names></name> <name><surname>Boury</surname> <given-names>M</given-names></name> <name><surname>Oswald</surname> <given-names>E</given-names></name> <name><surname>Nougayrede</surname> <given-names>JP</given-names></name></person-group>. <article-title>Escherichia coli induces DNA damage in vivo and triggers genomic instability in mammalian cells</article-title>. <source>Proc Natl Acad Sci USA</source>. (<year>2010</year>) <volume>107</volume>:<fpage>11537</fpage>&#x02013;<lpage>42</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1001261107</pub-id><pub-id pub-id-type="pmid">20534522</pub-id></citation></ref>
<ref id="B80">
<label>80.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pleguezuelos-Manzano</surname> <given-names>C</given-names></name> <name><surname>Puschhof</surname> <given-names>J</given-names></name> <name><surname>Huber</surname> <given-names>AR</given-names></name> <name><surname>van Hoeck</surname> <given-names>A</given-names></name> <name><surname>Wood</surname> <given-names>HM</given-names></name> <name><surname>Nomburg</surname> <given-names>J</given-names></name> <etal/></person-group>. <article-title>Mutational signature in colorectal cancer caused by genotoxic pks(&#x0002B;) <italic>E. coli</italic></article-title>. <source>Nature.</source> (<year>2020</year>) <volume>580</volume>:<fpage>269</fpage>&#x02013;<lpage>73</lpage>. <pub-id pub-id-type="doi">10.1038/s41586-020-2080-8</pub-id><pub-id pub-id-type="pmid">32106218</pub-id></citation></ref>
<ref id="B81">
<label>81.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tsoi</surname> <given-names>H</given-names></name> <name><surname>Chu</surname> <given-names>ESH</given-names></name> <name><surname>Zhang</surname> <given-names>X</given-names></name> <name><surname>Sheng</surname> <given-names>J</given-names></name> <name><surname>Nakatsu</surname> <given-names>G</given-names></name> <name><surname>Ng</surname> <given-names>SC</given-names></name> <etal/></person-group>. <article-title>Peptostreptococcus anaerobius induces intracellular cholesterol biosynthesis in colon cells to induce proliferation and causes dysplasia in mice</article-title>. <source>Gastroenterology</source>. (<year>2017</year>) <volume>152</volume>:<fpage>1419</fpage>&#x02013;<lpage>33.e5</lpage>. <pub-id pub-id-type="doi">10.1053/j.gastro.2017.01.009</pub-id><pub-id pub-id-type="pmid">28126350</pub-id></citation></ref>
<ref id="B82">
<label>82.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Boleij</surname> <given-names>A</given-names></name> <name><surname>Hechenbleikner</surname> <given-names>EM</given-names></name> <name><surname>Goodwin</surname> <given-names>AC</given-names></name> <name><surname>Badani</surname> <given-names>R</given-names></name> <name><surname>Stein</surname> <given-names>EM</given-names></name> <name><surname>Lazarev</surname> <given-names>MG</given-names></name> <etal/></person-group>. <article-title>The Bacteroides fragilis toxin gene is prevalent in the colon mucosa of colorectal cancer patients</article-title>. <source>Clin Infect Dis</source>. (<year>2015</year>) <volume>60</volume>:<fpage>208</fpage>&#x02013;<lpage>15</lpage>. <pub-id pub-id-type="doi">10.1093/cid/ciu787</pub-id><pub-id pub-id-type="pmid">25305284</pub-id></citation></ref>
<ref id="B83">
<label>83.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Li</surname> <given-names>J</given-names></name> <name><surname>Wang</surname> <given-names>R</given-names></name> <name><surname>Zhou</surname> <given-names>X</given-names></name> <name><surname>Wang</surname> <given-names>W</given-names></name> <name><surname>Gao</surname> <given-names>S</given-names></name> <name><surname>Mao</surname> <given-names>Y</given-names></name> <etal/></person-group>. <article-title>Genomic and transcriptomic profiling of carcinogenesis in patients with familial adenomatous polyposis</article-title>. <source>Gut.</source> (<year>2019</year>) <volume>69</volume>:<fpage>1283</fpage>&#x02013;<lpage>93</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2019-319438</pub-id><pub-id pub-id-type="pmid">31744909</pub-id></citation></ref>
<ref id="B84">
<label>84.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dejea</surname> <given-names>CM</given-names></name> <name><surname>Fathi</surname> <given-names>P</given-names></name> <name><surname>Craig</surname> <given-names>JM</given-names></name> <name><surname>Boleij</surname> <given-names>A</given-names></name> <name><surname>Taddese</surname> <given-names>R</given-names></name> <name><surname>Geis</surname> <given-names>AL</given-names></name> <etal/></person-group>. <article-title>Patients with familial adenomatous polyposis harbor colonic biofilms containing tumorigenic bacteria</article-title>. <source>Science</source>. (<year>2018</year>) <volume>359</volume>:<fpage>592</fpage>&#x02013;<lpage>7</lpage>. <pub-id pub-id-type="doi">10.1126/science.aah3648</pub-id><pub-id pub-id-type="pmid">29420293</pub-id></citation></ref>
<ref id="B85">
<label>85.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liang</surname> <given-names>S</given-names></name> <name><surname>Mao</surname> <given-names>Y</given-names></name> <name><surname>Liao</surname> <given-names>M</given-names></name> <name><surname>Xu</surname> <given-names>Y</given-names></name> <name><surname>Chen</surname> <given-names>Y</given-names></name> <name><surname>Huang</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>Gut microbiome associated with APC gene mutation in patients with intestinal adenomatous polyps</article-title>. <source>Int J Biol Sci</source>. (<year>2020</year>) <volume>16</volume>:<fpage>135</fpage>&#x02013;<lpage>46</lpage>. <pub-id pub-id-type="doi">10.7150/ijbs.37399</pub-id><pub-id pub-id-type="pmid">31892851</pub-id></citation></ref>
<ref id="B86">
<label>86.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>Y</given-names></name> <name><surname>Kang</surname> <given-names>C</given-names></name> <name><surname>Wang</surname> <given-names>XL</given-names></name> <name><surname>Zhou</surname> <given-names>M</given-names></name> <name><surname>Chen</surname> <given-names>MT</given-names></name> <name><surname>Zhu</surname> <given-names>XH</given-names></name> <etal/></person-group>. <article-title>Dietary factors modulate colonic tumorigenesis through the interaction of gut microbiota and host chloride channels</article-title>. <source>Mol Nutr Food Res</source>. (<year>2018</year>) <volume>62</volume>:<fpage>554</fpage>. <pub-id pub-id-type="doi">10.1002/mnfr.201700554</pub-id><pub-id pub-id-type="pmid">29331105</pub-id></citation></ref>
<ref id="B87">
<label>87.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Piazzi</surname> <given-names>G</given-names></name> <name><surname>Prossomariti</surname> <given-names>A</given-names></name> <name><surname>Baldassarre</surname> <given-names>M</given-names></name> <name><surname>Montagna</surname> <given-names>C</given-names></name> <name><surname>Vitaglione</surname> <given-names>P</given-names></name> <name><surname>Fogliano</surname> <given-names>V</given-names></name> <etal/></person-group>. <article-title>A mediterranean diet mix has chemopreventive effects in a murine model of colorectal cancer modulating apoptosis and the gut microbiota</article-title>. <source>Front Oncol</source>. (<year>2019</year>) <volume>9</volume>:<fpage>140</fpage>. <pub-id pub-id-type="doi">10.3389/fonc.2019.00140</pub-id><pub-id pub-id-type="pmid">30915275</pub-id></citation></ref>
<ref id="B88">
<label>88.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kusters</surname> <given-names>JG</given-names></name> <name><surname>van Vliet</surname> <given-names>AH</given-names></name> <name><surname>Kuipers</surname> <given-names>EJ</given-names></name></person-group>. <article-title>Pathogenesis of Helicobacter pylori infection</article-title>. <source>Clin Microbiol Rev</source>. (<year>2006</year>) <volume>19</volume>:<fpage>449</fpage>&#x02013;<lpage>90</lpage>. <pub-id pub-id-type="doi">10.1128/CMR.00054-05</pub-id></citation></ref>
<ref id="B89">
<label>89.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bontems</surname> <given-names>P</given-names></name> <name><surname>Aksoy</surname> <given-names>E</given-names></name> <name><surname>Burette</surname> <given-names>A</given-names></name> <name><surname>Segers</surname> <given-names>V</given-names></name> <name><surname>Deprez</surname> <given-names>C</given-names></name> <name><surname>Mascart</surname> <given-names>F</given-names></name> <etal/></person-group>. <article-title>NF-&#x003BA;B activation and severity of gastritis in Helicobacter pylori-infected children and adults</article-title>. <source>Helicobacter</source>. (<year>2014</year>) <volume>19</volume>:<fpage>157</fpage>&#x02013;<lpage>67</lpage>. <pub-id pub-id-type="doi">10.1111/hel.12118</pub-id><pub-id pub-id-type="pmid">24661597</pub-id></citation></ref>
<ref id="B90">
<label>90.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Keates</surname> <given-names>S</given-names></name> <name><surname>Hitti</surname> <given-names>YS</given-names></name> <name><surname>Upton</surname> <given-names>M</given-names></name> <name><surname>Kelly</surname> <given-names>CP</given-names></name></person-group>. <article-title>Helicobacter pylori infection activates NF-&#x003BA; B in gastric epithelial cells</article-title>. <source>Gastroenterology</source>. (<year>1997</year>) <volume>113</volume>:<fpage>1099</fpage>&#x02013;<lpage>109</lpage>. <pub-id pub-id-type="doi">10.1053/gast.1997.v113.pm9322504</pub-id><pub-id pub-id-type="pmid">9322504</pub-id></citation></ref>
<ref id="B91">
<label>91.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Luzza</surname> <given-names>F</given-names></name> <name><surname>Parrello</surname> <given-names>T</given-names></name> <name><surname>Monteleone</surname> <given-names>G</given-names></name> <name><surname>Sebkova</surname> <given-names>L</given-names></name> <name><surname>Romano</surname> <given-names>M</given-names></name> <name><surname>Zarrilli</surname> <given-names>R</given-names></name> <etal/></person-group>. <article-title>Up-regulation of IL-17 is associated with bioactive IL-8 expression in Helicobacter pylori-infected human gastric mucosa</article-title>. <source>J Immunol</source>. (<year>2000</year>) <volume>165</volume>:<fpage>5332</fpage>&#x02013;<lpage>7</lpage>. <pub-id pub-id-type="doi">10.4049/jimmunol.165.9.5332</pub-id><pub-id pub-id-type="pmid">11046068</pub-id></citation></ref>
<ref id="B92">
<label>92.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ferrero</surname> <given-names>RL</given-names></name> <name><surname>Ave</surname> <given-names>P</given-names></name> <name><surname>Ndiaye</surname> <given-names>D</given-names></name> <name><surname>Bambou</surname> <given-names>JC</given-names></name> <name><surname>Huerre</surname> <given-names>MR</given-names></name> <name><surname>Philpott</surname> <given-names>DJ</given-names></name> <etal/></person-group>. <article-title>NF-&#x003BA;B activation during acute Helicobacter pylori infection in mice</article-title>. <source>Infect Immun</source>. (<year>2008</year>) <volume>76</volume>:<fpage>551</fpage>&#x02013;<lpage>61</lpage>. <pub-id pub-id-type="doi">10.1128/IAI.01107-07</pub-id><pub-id pub-id-type="pmid">18070899</pub-id></citation></ref>
<ref id="B93">
<label>93.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hu</surname> <given-names>Y</given-names></name> <name><surname>Liu</surname> <given-names>JP</given-names></name> <name><surname>Zhu</surname> <given-names>Y</given-names></name> <name><surname>Lu</surname> <given-names>NH</given-names></name></person-group>. <article-title>The importance of toll-like receptors in NF-&#x003BA;B signaling pathway activation by helicobacter pylori infection and the regulators of this response</article-title>. <source>Helicobacter</source>. (<year>2016</year>) <volume>21</volume>:<fpage>428</fpage>&#x02013;<lpage>40</lpage>. <pub-id pub-id-type="doi">10.1111/hel.12292</pub-id><pub-id pub-id-type="pmid">26763943</pub-id></citation></ref>
<ref id="B94">
<label>94.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Smith</surname> <given-names>MF</given-names> <suffix>Jr</suffix></name> <name><surname>Mitchell</surname> <given-names>A</given-names></name> <name><surname>Li</surname> <given-names>G</given-names></name> <name><surname>Ding</surname> <given-names>S</given-names></name> <name><surname>Fitzmaurice</surname> <given-names>AM</given-names></name> <name><surname>Ryan</surname> <given-names>K</given-names></name> <etal/></person-group>. <article-title>Toll-like receptor (TLR) 2 and TLR5, but not TLR4, are required for Helicobacter pylori-induced NF-&#x003BA; B activation and chemokine expression by epithelial cells</article-title>. <source>J Biol Chem</source>. (<year>2003</year>) <volume>278</volume>:<fpage>32552</fpage>&#x02013;<lpage>60</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M305536200</pub-id><pub-id pub-id-type="pmid">12807870</pub-id></citation></ref>
<ref id="B95">
<label>95.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Suarez</surname> <given-names>G</given-names></name> <name><surname>Romero-Gallo</surname> <given-names>J</given-names></name> <name><surname>Piazuelo</surname> <given-names>MB</given-names></name> <name><surname>Wang</surname> <given-names>G</given-names></name> <name><surname>Maier</surname> <given-names>RJ</given-names></name> <name><surname>Forsberg</surname> <given-names>LS</given-names></name> <etal/></person-group>. <article-title>Modification of Helicobacter pylori peptidoglycan Enhances NOD1 activation and promotes cancer of the stomach</article-title>. <source>Cancer Res</source>. (<year>2015</year>) <volume>75</volume>:<fpage>1749</fpage>&#x02013;<lpage>59</lpage>. <pub-id pub-id-type="doi">10.1158/0008-5472.CAN-14-2291</pub-id><pub-id pub-id-type="pmid">25732381</pub-id></citation></ref>
<ref id="B96">
<label>96.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Viala</surname> <given-names>J</given-names></name> <name><surname>Chaput</surname> <given-names>C</given-names></name> <name><surname>Boneca</surname> <given-names>IG</given-names></name> <name><surname>Cardona</surname> <given-names>A</given-names></name> <name><surname>Girardin</surname> <given-names>SE</given-names></name> <name><surname>Moran</surname> <given-names>AP</given-names></name> <etal/></person-group>. <article-title>Nod1 responds to peptidoglycan delivered by the Helicobacter pylori cag pathogenicity island</article-title>. <source>Nat Immunol</source>. (<year>2004</year>) <volume>5</volume>:<fpage>1166</fpage>&#x02013;<lpage>74</lpage>. <pub-id pub-id-type="doi">10.1038/ni1131</pub-id><pub-id pub-id-type="pmid">15489856</pub-id></citation></ref>
<ref id="B97">
<label>97.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gall</surname> <given-names>A</given-names></name> <name><surname>Gaudet</surname> <given-names>RG</given-names></name> <name><surname>Gray-Owen</surname> <given-names>SD</given-names></name> <name><surname>Salama</surname> <given-names>NR</given-names></name></person-group>. <article-title>TIFA signaling in gastric epithelial cells initiates the cag Type 4 secretion system-dependent innate immune response to helicobacter pylori infection</article-title>. <source>mBio</source>. (<year>2017</year>) <volume>8</volume>:<fpage>e01168</fpage>&#x02013;<lpage>17</lpage>. <pub-id pub-id-type="doi">10.1128/mBio.01168-17</pub-id><pub-id pub-id-type="pmid">28811347</pub-id></citation></ref>
<ref id="B98">
<label>98.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Koeppel</surname> <given-names>M</given-names></name> <name><surname>Garcia-Alcalde</surname> <given-names>F</given-names></name> <name><surname>Glowinski</surname> <given-names>F</given-names></name> <name><surname>Schlaermann</surname> <given-names>P</given-names></name> <name><surname>Meyer</surname> <given-names>TF</given-names></name></person-group>. <article-title>Helicobacter pylori infection causes characteristic DNA damage patterns in human cells</article-title>. <source>Cell Rep</source>. (<year>2015</year>) <volume>11</volume>:<fpage>1703</fpage>&#x02013;<lpage>13</lpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2015.05.030</pub-id><pub-id pub-id-type="pmid">26074077</pub-id></citation></ref>
<ref id="B99">
<label>99.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hartung</surname> <given-names>ML</given-names></name> <name><surname>Gruber</surname> <given-names>DC</given-names></name> <name><surname>Koch</surname> <given-names>KN</given-names></name> <name><surname>Gruter</surname> <given-names>L</given-names></name> <name><surname>Rehrauer</surname> <given-names>H</given-names></name> <name><surname>Tegtmeyer</surname> <given-names>N</given-names></name> <etal/></person-group>. <article-title>H. pylori-induced DNA strand breaks are introduced by nucleotide excision repair endonucleases and promote NF-&#x003BA;B target gene expression</article-title>. <source>Cell Rep</source>. (<year>2015</year>) <volume>13</volume>:<fpage>70</fpage>&#x02013;<lpage>9</lpage>. <pub-id pub-id-type="doi">10.1016/j.celrep.2015.08.074</pub-id><pub-id pub-id-type="pmid">26411687</pub-id></citation></ref>
<ref id="B100">
<label>100.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Byun</surname> <given-names>E</given-names></name> <name><surname>Park</surname> <given-names>B</given-names></name> <name><surname>Lim</surname> <given-names>JW</given-names></name> <name><surname>Kim</surname> <given-names>H</given-names></name></person-group>. <article-title>Activation of NF-&#x003BA;B and AP-1 mediates hyperproliferation by inducing beta-Catenin and c-Myc in Helicobacter pylori-Infected gastric epithelial cells</article-title>. <source>Yonsei Med J</source>. (<year>2016</year>) <volume>57</volume>:<fpage>647</fpage>&#x02013;<lpage>51</lpage>. <pub-id pub-id-type="doi">10.3349/ymj.2016.57.3.647</pub-id><pub-id pub-id-type="pmid">26996564</pub-id></citation></ref>
<ref id="B101">
<label>101.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhu</surname> <given-names>S</given-names></name> <name><surname>Soutto</surname> <given-names>M</given-names></name> <name><surname>Chen</surname> <given-names>Z</given-names></name> <name><surname>Peng</surname> <given-names>D</given-names></name> <name><surname>Romero-Gallo</surname> <given-names>J</given-names></name> <name><surname>Krishna</surname> <given-names>US</given-names></name> <etal/></person-group>. <article-title>Helicobacter pylori-induced cell death is counteracted by NF-&#x003BA;B-mediated transcription of DARPP-32</article-title>. <source>Gut</source>. (<year>2017</year>) <volume>66</volume>:<fpage>761</fpage>&#x02013;<lpage>2</lpage>. <pub-id pub-id-type="doi">10.1136/gutjnl-2016-312141</pub-id><pub-id pub-id-type="pmid">27590997</pub-id></citation></ref>
<ref id="B102">
<label>102.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yang</surname> <given-names>F</given-names></name> <name><surname>Xu</surname> <given-names>Y</given-names></name> <name><surname>Liu</surname> <given-names>C</given-names></name> <name><surname>Ma</surname> <given-names>C</given-names></name> <name><surname>Zou</surname> <given-names>S</given-names></name> <name><surname>Xu</surname> <given-names>X</given-names></name> <etal/></person-group>. <article-title>NF-&#x003BA;B/miR-223-3p/ARID1A axis is involved in Helicobacter pylori CagA-induced gastric carcinogenesis and progression</article-title>. <source>Cell Death Dis</source>. (<year>2018</year>) <volume>9</volume>:<fpage>12</fpage>. <pub-id pub-id-type="doi">10.1038/s41419-017-0020-9</pub-id><pub-id pub-id-type="pmid">29317648</pub-id></citation></ref>
<ref id="B103">
<label>103.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hwang</surname> <given-names>JW</given-names></name> <name><surname>Baek</surname> <given-names>YM</given-names></name> <name><surname>Yang</surname> <given-names>KE</given-names></name> <name><surname>Yoo</surname> <given-names>HS</given-names></name> <name><surname>Cho</surname> <given-names>CK</given-names></name> <name><surname>Lee</surname> <given-names>YW</given-names></name> <etal/></person-group>. <article-title>Lactobacillus casei extract induces apoptosis in gastric cancer by inhibiting NF-&#x003BA;B and mTOR-mediated signaling</article-title>. <source>Integr Cancer Ther</source>. (<year>2013</year>) <volume>12</volume>:<fpage>165</fpage>&#x02013;<lpage>73</lpage>. <pub-id pub-id-type="doi">10.1177/1534735412442380</pub-id><pub-id pub-id-type="pmid">22505595</pub-id></citation></ref>
<ref id="B104">
<label>104.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shibata</surname> <given-names>W</given-names></name> <name><surname>Takaishi</surname> <given-names>S</given-names></name> <name><surname>Muthupalani</surname> <given-names>S</given-names></name> <name><surname>Pritchard</surname> <given-names>DM</given-names></name> <name><surname>Whary</surname> <given-names>MT</given-names></name> <name><surname>Rogers</surname> <given-names>AB</given-names></name> <etal/></person-group>. <article-title>Conditional deletion of I&#x003BA;B-kinase-beta accelerates helicobacter-dependent gastric apoptosis, proliferation, and preneoplasia</article-title>. <source>Gastroenterology</source>. (<year>2010</year>) <volume>138</volume>:<fpage>1022</fpage>&#x02013;<lpage>34.e1021&#x02013;10</lpage>. <pub-id pub-id-type="doi">10.1053/j.gastro.2009.11.054</pub-id><pub-id pub-id-type="pmid">19962981</pub-id></citation></ref>
<ref id="B105">
<label>105.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>S</given-names></name> <name><surname>Su</surname> <given-names>T</given-names></name> <name><surname>Zhang</surname> <given-names>Y</given-names></name> <name><surname>Lee</surname> <given-names>A</given-names></name> <name><surname>He</surname> <given-names>J</given-names></name> <name><surname>Ge</surname> <given-names>Q</given-names></name> <etal/></person-group>. <article-title>Fusobacterium nucleatum promotes colorectal cancer metastasis by modulating KRT7-AS/KRT7</article-title>. <source>Gut Microbes</source>. (<year>2020</year>) <volume>7</volume>:<fpage>1</fpage>&#x02013;<lpage>15</lpage>. <pub-id pub-id-type="doi">10.1080/19490976.2019.1695494</pub-id><pub-id pub-id-type="pmid">31910722</pub-id></citation></ref>
<ref id="B106">
<label>106.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kostic</surname> <given-names>AD</given-names></name> <name><surname>Chun</surname> <given-names>E</given-names></name> <name><surname>Robertson</surname> <given-names>L</given-names></name> <name><surname>Glickman</surname> <given-names>JN</given-names></name> <name><surname>Gallini</surname> <given-names>CA</given-names></name> <name><surname>Michaud</surname> <given-names>M</given-names></name> <etal/></person-group>. <article-title>Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment</article-title>. <source>Cell Host Microbe</source>. (<year>2013</year>) <volume>14</volume>:<fpage>207</fpage>&#x02013;<lpage>15</lpage>. <pub-id pub-id-type="doi">10.1016/j.chom.2013.07.007</pub-id><pub-id pub-id-type="pmid">23954159</pub-id></citation></ref>
<ref id="B107">
<label>107.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yang</surname> <given-names>Y</given-names></name> <name><surname>Weng</surname> <given-names>W</given-names></name> <name><surname>Peng</surname> <given-names>J</given-names></name> <name><surname>Hong</surname> <given-names>L</given-names></name> <name><surname>Yang</surname> <given-names>L</given-names></name> <name><surname>Toiyama</surname> <given-names>Y</given-names></name> <etal/></person-group>. <article-title>Fusobacterium nucleatum increases proliferation of colorectal cancer cells and tumor development in mice by activating toll-like receptor 4 signaling to nuclear factor-&#x003BA;B, and up-regulating expression of microRNA-21</article-title>. <source>Gastroenterology</source>. (<year>2017</year>) <volume>152</volume>:<fpage>851</fpage>&#x02013;<lpage>66.e24</lpage>. <pub-id pub-id-type="doi">10.1053/j.gastro.2016.11.018</pub-id><pub-id pub-id-type="pmid">27876571</pub-id></citation></ref>
<ref id="B108">
<label>108.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hung</surname> <given-names>SC</given-names></name> <name><surname>Huang</surname> <given-names>PR</given-names></name> <name><surname>Almeida-da-Silva</surname> <given-names>CLC</given-names></name> <name><surname>Atanasova</surname> <given-names>KR</given-names></name> <name><surname>Yilmaz</surname> <given-names>O</given-names></name> <name><surname>Ojcius</surname> <given-names>DM</given-names></name></person-group>. <article-title>NLRX1 modulates differentially NLRP3 inflammasome activation and NF-&#x003BA;B signaling during Fusobacterium nucleatum infection</article-title>. <source>Microbes Infect</source>. (<year>2018</year>) <volume>20</volume>:<fpage>615</fpage>&#x02013;<lpage>25</lpage>. <pub-id pub-id-type="doi">10.1016/j.micinf.2017.09.014</pub-id><pub-id pub-id-type="pmid">29024797</pub-id></citation></ref>
<ref id="B109">
<label>109.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kang</surname> <given-names>W</given-names></name> <name><surname>Jia</surname> <given-names>Z</given-names></name> <name><surname>Tang</surname> <given-names>D</given-names></name> <name><surname>Zhang</surname> <given-names>Z</given-names></name> <name><surname>Gao</surname> <given-names>H</given-names></name> <name><surname>He</surname> <given-names>K</given-names></name> <etal/></person-group>. <article-title>Fusobacterium nucleatum facilitates apoptosis, ros generation, and inflammatory cytokine production by activating AKT/MAPK and NF-&#x003BA;B signaling pathways in human gingival fibroblasts</article-title>. <source>Oxid Med Cell Longev</source>. (<year>2019</year>) <volume>2019</volume>:<fpage>1681972</fpage>. <pub-id pub-id-type="doi">10.1155/2019/1681972</pub-id><pub-id pub-id-type="pmid">31737164</pub-id></citation></ref>
<ref id="B110">
<label>110.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chen</surname> <given-names>Y</given-names></name> <name><surname>Chen</surname> <given-names>Y</given-names></name> <name><surname>Cao</surname> <given-names>P</given-names></name> <name><surname>Su</surname> <given-names>W</given-names></name> <name><surname>Zhan</surname> <given-names>N</given-names></name> <name><surname>Dong</surname> <given-names>W</given-names></name></person-group>. <article-title>Fusobacterium nucleatum facilitates ulcerative colitis through activating IL-17F signaling to NF-&#x003BA;B via the upregulation of CARD3 expression</article-title>. <source>J Pathol</source>. (<year>2020</year>) <volume>250</volume>:<fpage>170</fpage>&#x02013;<lpage>82</lpage>. <pub-id pub-id-type="doi">10.1002/path.5358</pub-id><pub-id pub-id-type="pmid">31610014</pub-id></citation></ref>
<ref id="B111">
<label>111.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cao</surname> <given-names>P</given-names></name> <name><surname>Chen</surname> <given-names>Y</given-names></name> <name><surname>Chen</surname> <given-names>Y</given-names></name> <name><surname>Su</surname> <given-names>W</given-names></name> <name><surname>Zhan</surname> <given-names>N</given-names></name> <name><surname>Dong</surname> <given-names>W</given-names></name></person-group>. <article-title>Fusobacterium nucleatum activates endoplasmic reticulum stress to promote crohn&#x00027;s disease development via the upregulation of CARD3 expression</article-title>. <source>Front Pharmacol</source>. (<year>2020</year>) <volume>11</volume>:<fpage>106</fpage>. <pub-id pub-id-type="doi">10.3389/fphar.2020.00106</pub-id><pub-id pub-id-type="pmid">32153411</pub-id></citation></ref>
<ref id="B112">
<label>112.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lourenco</surname> <given-names>TG</given-names></name> <name><surname>Heller</surname> <given-names>D</given-names></name> <name><surname>Silva-Boghossian</surname> <given-names>CM</given-names></name> <name><surname>Cotton</surname> <given-names>SL</given-names></name> <name><surname>Paster</surname> <given-names>BJ</given-names></name> <name><surname>Colombo</surname> <given-names>AP</given-names></name></person-group>. <article-title>Microbial signature profiles of periodontally healthy and diseased patients</article-title>. <source>J Clin Periodontol</source>. (<year>2014</year>) <volume>41</volume>:<fpage>1027</fpage>&#x02013;<lpage>36</lpage>. <pub-id pub-id-type="doi">10.1111/jcpe.12302</pub-id><pub-id pub-id-type="pmid">25139407</pub-id></citation></ref>
<ref id="B113">
<label>113.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Han</surname> <given-names>YW</given-names></name></person-group>. <article-title>Fusobacterium nucleatum: a commensal-turned pathogen</article-title>. <source>Curr Opin Microbiol</source>. (<year>2015</year>) <volume>23</volume>:<fpage>141</fpage>&#x02013;<lpage>7</lpage>. <pub-id pub-id-type="doi">10.1016/j.mib.2014.11.013</pub-id><pub-id pub-id-type="pmid">25576662</pub-id></citation></ref>
<ref id="B114">
<label>114.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Strauss</surname> <given-names>J</given-names></name> <name><surname>Kaplan</surname> <given-names>GG</given-names></name> <name><surname>Beck</surname> <given-names>PL</given-names></name> <name><surname>Rioux</surname> <given-names>K</given-names></name> <name><surname>Panaccione</surname> <given-names>R</given-names></name> <name><surname>Devinney</surname> <given-names>R</given-names></name> <etal/></person-group>. <article-title>Invasive potential of gut mucosa-derived Fusobacterium nucleatum positively correlates with IBD status of the host</article-title>. <source>Inflamm Bowel Dis</source>. (<year>2011</year>) <volume>17</volume>:<fpage>1971</fpage>&#x02013;<lpage>8</lpage>. <pub-id pub-id-type="doi">10.1002/ibd.21606</pub-id><pub-id pub-id-type="pmid">21830275</pub-id></citation></ref>
<ref id="B115">
<label>115.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Litvak</surname> <given-names>Y</given-names></name> <name><surname>Sharon</surname> <given-names>S</given-names></name> <name><surname>Hyams</surname> <given-names>M</given-names></name> <name><surname>Zhang</surname> <given-names>L</given-names></name> <name><surname>Kobi</surname> <given-names>S</given-names></name> <name><surname>Katsowich</surname> <given-names>N</given-names></name> <etal/></person-group>. <article-title>Epithelial cells detect functional type III secretion system of enteropathogenic <italic>Escherichia coli</italic> through a novel NF-&#x003BA;B signaling pathway</article-title>. <source>PLoS Pathog</source>. (<year>2017</year>) <volume>13</volume>:<fpage>e1006472</fpage>. <pub-id pub-id-type="doi">10.1371/journal.ppat.1006472</pub-id><pub-id pub-id-type="pmid">28671993</pub-id></citation></ref>
<ref id="B116">
<label>116.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pallett</surname> <given-names>MA</given-names></name> <name><surname>Berger</surname> <given-names>CN</given-names></name> <name><surname>Pearson</surname> <given-names>JS</given-names></name> <name><surname>Hartland</surname> <given-names>EL</given-names></name> <name><surname>Frankel</surname> <given-names>G</given-names></name></person-group>. <article-title>The type III secretion effector NleF of enteropathogenic <italic>Escherichia coli</italic> activates NF-&#x003BA;B early during infection</article-title>. <source>Infect Immun</source>. (<year>2014</year>) <volume>82</volume>:<fpage>4878</fpage>&#x02013;<lpage>88</lpage>. <pub-id pub-id-type="doi">10.1128/IAI.02131-14</pub-id><pub-id pub-id-type="pmid">25183730</pub-id></citation></ref>
<ref id="B117">
<label>117.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sahu</surname> <given-names>U</given-names></name> <name><surname>Choudhury</surname> <given-names>A</given-names></name> <name><surname>Parvez</surname> <given-names>S</given-names></name> <name><surname>Biswas</surname> <given-names>S</given-names></name> <name><surname>Kar</surname> <given-names>S</given-names></name></person-group>. <article-title>Induction of intestinal stemness and tumorigenicity by aberrant internalization of commensal non-pathogenic <italic>E. coli</italic></article-title>. <source>Cell Death Dis</source>. (<year>2017</year>) <volume>8</volume>:<fpage>e2667</fpage>. <pub-id pub-id-type="doi">10.1038/cddis.2017.27</pub-id><pub-id pub-id-type="pmid">28300841</pub-id></citation></ref>
<ref id="B118">
<label>118.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>La Ferla</surname> <given-names>K</given-names></name> <name><surname>Seegert</surname> <given-names>D</given-names></name> <name><surname>Schreiber</surname> <given-names>S</given-names></name></person-group>. <article-title>Activation of NF-&#x003BA;B in intestinal epithelial cells by <italic>E. coli</italic> strains isolated from the colonic mucosa of IBD patients</article-title>. <source>Int J Colorectal Dis</source>. (<year>2004</year>) <volume>19</volume>:<fpage>334</fpage>&#x02013;<lpage>42</lpage>. <pub-id pub-id-type="doi">10.1007/s00384-004-0583-7</pub-id><pub-id pub-id-type="pmid">15103488</pub-id></citation></ref>
<ref id="B119">
<label>119.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Karrasch</surname> <given-names>T</given-names></name> <name><surname>Kim</surname> <given-names>JS</given-names></name> <name><surname>Muhlbauer</surname> <given-names>M</given-names></name> <name><surname>Magness</surname> <given-names>ST</given-names></name> <name><surname>Jobin</surname> <given-names>C</given-names></name></person-group>. <article-title>Gnotobiotic IL-10-/-;NF-&#x003BA; B(EGFP) mice reveal the critical role of TLR/NF-&#x003BA; B signaling in commensal bacteria-induced colitis</article-title>. <source>J Immunol</source>. (<year>2007</year>) <volume>178</volume>:<fpage>6522</fpage>&#x02013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.4049/jimmunol.178.10.6522</pub-id><pub-id pub-id-type="pmid">17475882</pub-id></citation></ref>
<ref id="B120">
<label>120.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Long</surname> <given-names>X</given-names></name> <name><surname>Wong</surname> <given-names>CC</given-names></name> <name><surname>Tong</surname> <given-names>L</given-names></name> <name><surname>Chu</surname> <given-names>ESH</given-names></name> <name><surname>Ho Szeto</surname> <given-names>C</given-names></name> <name><surname>Go</surname> <given-names>MYY</given-names></name> <etal/></person-group>. <article-title>Peptostreptococcus anaerobius promotes colorectal carcinogenesis and modulates tumour immunity</article-title>. <source>Nat Microbiol</source>. (<year>2019</year>) <volume>4</volume>:<fpage>2319</fpage>&#x02013;<lpage>30</lpage>. <pub-id pub-id-type="doi">10.1038/s41564-019-0541-3</pub-id><pub-id pub-id-type="pmid">31501538</pub-id></citation></ref>
<ref id="B121">
<label>121.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chung</surname> <given-names>L</given-names></name> <name><surname>Thiele Orberg</surname> <given-names>E</given-names></name> <name><surname>Geis</surname> <given-names>AL</given-names></name> <name><surname>Chan</surname> <given-names>JL</given-names></name> <name><surname>Fu</surname> <given-names>K</given-names></name> <name><surname>DeStefano Shields</surname> <given-names>CE</given-names></name> <etal/></person-group>. <article-title>Bacteroides fragilis toxin coordinates a pro-carcinogenic inflammatory cascade via targeting of colonic epithelial cells</article-title>. <source>Cell Host Microbe</source>. (<year>2018</year>) <volume>23</volume>:<fpage>421</fpage>. <pub-id pub-id-type="doi">10.1016/j.chom.2018.01.007</pub-id></citation></ref>
<ref id="B122">
<label>122.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kim</surname> <given-names>JM</given-names></name> <name><surname>Cho</surname> <given-names>SJ</given-names></name> <name><surname>Oh</surname> <given-names>YK</given-names></name> <name><surname>Jung</surname> <given-names>HY</given-names></name> <name><surname>Kim</surname> <given-names>YJ</given-names></name> <name><surname>Kim</surname> <given-names>N</given-names></name></person-group>. <article-title>Nuclear factor-&#x003BA; B activation pathway in intestinal epithelial cells is a major regulator of chemokine gene expression and neutrophil migration induced by Bacteroides fragilis enterotoxin</article-title>. <source>Clin Exp Immunol</source>. (<year>2002</year>) <volume>130</volume>:<fpage>59</fpage>&#x02013;<lpage>66</lpage>. <pub-id pub-id-type="doi">10.1046/j.1365-2249.2002.01921.x</pub-id><pub-id pub-id-type="pmid">12296854</pub-id></citation></ref>
<ref id="B123">
<label>123.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wu</surname> <given-names>S</given-names></name> <name><surname>Powell</surname> <given-names>J</given-names></name> <name><surname>Mathioudakis</surname> <given-names>N</given-names></name> <name><surname>Kane</surname> <given-names>S</given-names></name> <name><surname>Fernandez</surname> <given-names>E</given-names></name> <name><surname>Sears</surname> <given-names>CL</given-names></name></person-group>. <article-title>Bacteroides fragilis enterotoxin induces intestinal epithelial cell secretion of interleukin-8 through mitogen-activated protein kinases and a tyrosine kinase-regulated nuclear factor-&#x003BA;B pathway</article-title>. <source>Infect Immun</source>. (<year>2004</year>) <volume>72</volume>:<fpage>5832</fpage>&#x02013;<lpage>39</lpage>. <pub-id pub-id-type="doi">10.1128/IAI.72.10.5832-5839.2004</pub-id></citation></ref>
<ref id="B124">
<label>124.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jeon</surname> <given-names>JI</given-names></name> <name><surname>Ko</surname> <given-names>SH</given-names></name> <name><surname>Kim</surname> <given-names>JM</given-names></name></person-group>. <article-title>Intestinal epithelial cells exposed to bacteroides fragilis enterotoxin regulate NF-&#x003BA;B activation and inflammatory responses through beta-catenin expression</article-title>. <source>Infect Immun</source>. (<year>2019</year>) <volume>87</volume>:<fpage>e00312</fpage>&#x02013;<lpage>19</lpage>. <pub-id pub-id-type="doi">10.1128/IAI.00312-19</pub-id><pub-id pub-id-type="pmid">31451622</pub-id></citation></ref>
<ref id="B125">
<label>125.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ogino</surname> <given-names>S</given-names></name> <name><surname>Nowak</surname> <given-names>JA</given-names></name> <name><surname>Hamada</surname> <given-names>T</given-names></name> <name><surname>Milner</surname> <given-names>DA</given-names> <suffix>Jr</suffix></name> <name><surname>Nishihara</surname> <given-names>R</given-names></name></person-group>. <article-title>Insights into pathogenic interactions among environment, host, and tumor at the crossroads of molecular pathology and epidemiology</article-title>. <source>Annu Rev Pathol</source>. (<year>2019</year>) <volume>14</volume>:<fpage>83</fpage>&#x02013;<lpage>103</lpage>. <pub-id pub-id-type="doi">10.1146/annurev-pathmechdis-012418-012818</pub-id><pub-id pub-id-type="pmid">30125150</pub-id></citation></ref>
<ref id="B126">
<label>126.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hamada</surname> <given-names>T</given-names></name> <name><surname>Nowak</surname> <given-names>JA</given-names></name> <name><surname>Milner</surname> <given-names>DA</given-names> <suffix>Jr</suffix></name> <name><surname>Song</surname> <given-names>M</given-names></name> <name><surname>Ogino</surname> <given-names>S</given-names></name></person-group>. <article-title>Integration of microbiology, molecular pathology, and epidemiology: a new paradigm to explore the pathogenesis of microbiome-driven neoplasms</article-title>. <source>J Pathol</source>. (<year>2019</year>) <volume>247</volume>:<fpage>615</fpage>&#x02013;<lpage>28</lpage>. <pub-id pub-id-type="doi">10.1002/path.5236</pub-id><pub-id pub-id-type="pmid">30632609</pub-id></citation></ref>
<ref id="B127">
<label>127.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Keum</surname> <given-names>N</given-names></name> <name><surname>Giovannucci</surname> <given-names>E</given-names></name></person-group>. <article-title>Global burden of colorectal cancer: emerging trends, risk factors and prevention strategies</article-title>. <source>Nat Rev Gastroenterol Hepatol</source>. (<year>2019</year>) <volume>16</volume>:<fpage>713</fpage>&#x02013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.1038/s41575-019-0189-8</pub-id><pub-id pub-id-type="pmid">31455888</pub-id></citation></ref>
<ref id="B128">
<label>128.</label>
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ren</surname> <given-names>JS</given-names></name> <name><surname>Kamangar</surname> <given-names>F</given-names></name> <name><surname>Forman</surname> <given-names>D</given-names></name> <name><surname>Islami</surname> <given-names>F</given-names></name></person-group>. <article-title>Pickled food and risk of gastric cancer&#x02013;a systematic review and meta-analysis of English and Chinese literature</article-title>. <source>Cancer Epidemiol Biomarkers Prev</source>. (<year>2012</year>) <volume>21</volume>:<fpage>905</fpage>&#x02013;<lpage>15</lpage>. <pub-id pub-id-type="doi">10.1158/1055-9965.EPI-12-0202</pub-id><pub-id pub-id-type="pmid">22499775</pub-id></citation></ref>
</ref-list>
<fn-group>
<fn fn-type="financial-disclosure"><p><bold>Funding.</bold> This work was supported by the National Natural Science Foundation of China (81900500, 81670507, and 81870395), the Education Department of Jiangxi Province (GJJ180115) and Jiangxi Provincial Department of Science &#x00026; Technology (20192BAB215006).</p>
</fn>
</fn-group>
</back>
</article>