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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2017.01449</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Perspective</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Repertoire of BALB/c Mice Natural Anti-Carbohydrate Antibodies: Mice vs. Humans Difference, and Otherness of Individual Animals</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Bello-Gil</surname> <given-names>Daniel</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="cor1">&#x0002A;</xref>
<uri xlink:href="http://frontiersin.org/people/u/427228"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Khasbiullina</surname> <given-names>Nailya</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://frontiersin.org/people/u/490725"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Shilova</surname> <given-names>Nadezhda</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://frontiersin.org/people/u/445069"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Bovin</surname> <given-names>Nicolai</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://frontiersin.org/people/u/427657"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Ma&#x000F1;ez</surname> <given-names>Rafael</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="corresp" rid="cor1">&#x0002A;</xref>
<uri xlink:href="http://frontiersin.org/people/u/427658"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Infectious Pathology and Transplantation Division, Bellvitge Biomedical Research Institute (IDIBELL)</institution>, <addr-line>Hospitalet de Llobregat</addr-line>, <country>Spain</country></aff>
<aff id="aff2"><sup>2</sup><institution>Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences</institution>, <addr-line>Moscow</addr-line>, <country>Russia</country></aff>
<aff id="aff3"><sup>3</sup><institution>Intensive Care Department, Bellvitge University Hospital</institution>, <addr-line>Hospitalet de Llobregat</addr-line>, <country>Spain</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Victoriano Mulero, Universidad de Murcia, Spain</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Peter Isaac Lobo, University of Virginia, United States; Harry W. Schroeder, University of Alabama at Birmingham, United States</p></fn>
<corresp content-type="corresp" id="cor1">&#x0002A;Correspondence: Daniel Bello-Gil, <email>dbello&#x00040;idibell.cat</email>; Rafael Ma&#x000F1;ez, <email>rmanez&#x00040;bellvitgehospital.cat</email></corresp>
<fn fn-type="other" id="fn001"><p>Specialty section: This article was submitted to Comparative Immunology, a section of the journal Frontiers in Immunology</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>06</day>
<month>11</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>8</volume>
<elocation-id>1449</elocation-id>
<history>
<date date-type="received">
<day>15</day>
<month>06</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>17</day>
<month>10</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2017 Bello-Gil, Khasbiullina, Shilova, Bovin and Ma&#x000F1;ez.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Bello-Gil, Khasbiullina, Shilova, Bovin and Ma&#x000F1;ez</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>One of the most common genetic backgrounds for mice used as a model to investigate human diseases is the inbred BALB/c strain. This work is aimed to characterize the pattern of natural anti-carbohydrate antibodies present in the serum of 20 BALB/c mice by printed glycan array technology and to compare their binding specificities with that of human natural anti-carbohydrate antibodies. Natural antibodies (NAbs) from the serum of BALB/c mice interacted with 71 glycans from a library of 419 different carbohydrate structures. However, only seven of these glycans were recognized by the serum of all the animals studied, and other five glycans by at least 80% of mice. The pattern of the 12 glycans mostly recognized by the circulating antibodies of BALB/c mice differed significantly from that observed with natural anti-carbohydrate antibodies in humans. This lack of identical repertoires of natural anti-carbohydrate antibodies between individual inbred mice, and between mice and humans, should be taken into consideration when mouse models are intended to be used for investigation of NAbs in biomedical research.</p>
</abstract>
<kwd-group>
<kwd>printed glycan array technology</kwd>
<kwd>glycochips</kwd>
<kwd>BALB/c</kwd>
<kwd>humans</kwd>
<kwd>natural antibodies repertoire</kwd>
</kwd-group>
<counts>
<fig-count count="2"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="42"/>
<page-count count="7"/>
<word-count count="4954"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1" sec-type="introduction">
<title>Introduction</title>
<p>Antibody repertoire has marked the success and perpetuity of species. There is a group of circulating antibodies known as natural antibodies (NAbs) present in blood at early life without any previous immunogenic challenge (<xref ref-type="bibr" rid="B1">1</xref>, <xref ref-type="bibr" rid="B2">2</xref>). NAbs are spontaneously produced primarily by B-1 cells and their levels, and antigen affinities, remain almost constant during lifetime (<xref ref-type="bibr" rid="B3">3</xref>). NAbs (mostly IgM) are encoded by their genes in germline configuration by B cells, which have not been subjected to somatic hypermutation and affinity maturation (<xref ref-type="bibr" rid="B4">4</xref>). In fact, at least 80% of the serum IgM, in healthy conditions, is produced by this way (<xref ref-type="bibr" rid="B5">5</xref>). Little is known about factors involved in the regulation of composition of circulating NAbs. Its origin, repertoire, and physiological role are still controversial and an issue of continued debate (<xref ref-type="bibr" rid="B6">6</xref>).</p>
<p>The most expanded origin hypothesis suggests that stimulation of B-1 lymphocytes is produced by exposition to microbiota antigens (<xref ref-type="bibr" rid="B7">7</xref>). NAbs were highlighted by the discovery in the early twentieth century of the ABO antigen system in human blood. After that, a large group of NAbs has been described in humans, which include other alloantibodies related to blood group antigens (Rh, Lewis, etc.), xenoantibodies, and antibodies that target tumor-associated antigens (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B8">8</xref>). In general, NAbs show a polyreactive binding as they react to similar epitopes on a variety of molecular entities (<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B10">10</xref>). The maintenance of immune homeostasis through the defense against foreign invaders and own damaged/apoptotic cells, and the housekeeping removal of cellular debris or metabolite clearance, are functions attributed to NAbs (<xref ref-type="bibr" rid="B10">10</xref>, <xref ref-type="bibr" rid="B11">11</xref>). Most of these antibodies target carbohydrate structures, and have been reported to play protective, but also pathogenic roles, in both autoimmune and inflammatory diseases (<xref ref-type="bibr" rid="B12">12</xref>, <xref ref-type="bibr" rid="B13">13</xref>). Therefore, an understanding of the composition and function of the glycan-reactive NAb repertoire in a healthy condition continues being an issue of paramount importance (<xref ref-type="bibr" rid="B13">13</xref>).</p>
<p>The Printed Glycan Array (PGA) technology has a high sensitivity and offers the possibility to analyze hundreds of different glycan antigens to explore circulating natural anti-carbohydrate antibodies in different species (<xref ref-type="bibr" rid="B8">8</xref>, <xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B15">15</xref>). This allows the minimization of one of the major problems associated with the analysis of anti-carbohydrate antibodies; the cross-reactivity of a particular antibody with different glycans (<xref ref-type="bibr" rid="B16">16</xref>). Mice and specifically the BALB/c strain is one of the animal species more often used as a model of human diseases in both cancer and immunology research (<xref ref-type="bibr" rid="B17">17</xref>). Although there are previous reports regarding global analysis of the natural antibody repertoire (<xref ref-type="bibr" rid="B18">18</xref>&#x02013;<xref ref-type="bibr" rid="B20">20</xref>), little is known about the exact specificities targeted by natural anti-carbohydrate antibodies in these animals, and which of them are shared with humans. The study presented by Dai et al. (<xref ref-type="bibr" rid="B20">20</xref>) is limited to a reduced number of glycan moieties, including four representative carbohydrate structures: homo-polysaccharides of 1,4-linked-<sc>d</sc>-galactopyranosyluronic acids, 1,6-glucan (dextran), 1,3-mannan and &#x003B2;-glucan. From these glycan structures, mannan was not recognized by serum Abs from any of the mouse and rat strains examined and some variability regarding of glycan recognition among mice strains under examination was reported. Despite this, the authors concluded that IgM reactivity repertoires against glycan antigens in rodents are practically homogeneous within inbred strains and largely conserved in the species.</p>
<p>The present work is aimed to describe the natural anti-carbohydrate antibody repertoire of BALB/c mice by PGA, using a library of 419 different fully characterized glycan structures, and to compare their binding specificities with that of human natural anti-carbohydrate antibodies.</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec id="S2-1">
<title>Ethics Statement</title>
<p>Animals were handled in strict accordance with good animal practice as defined by the relevant local animal welfare bodies. All animal procedures were supervised and approved by Bellvitge Biomedical Research Institute (IDIBELL) ethics committee for animal experimentation and the Catalonia Government. The care and handling of the animals were conformed to the Guide for the Care and Use of Laboratory Animals published by the US National Institutes of Health (NIH Publication no. 85-23 revised 1996) and the European Agreement on Vertebrate Animal Protection for Experimental Use (86/609).</p>
</sec>
<sec id="S2-2">
<title>BALB/c Mice</title>
<p>BALB/c mice 10-week-old (Harlan, France), 13 female and 7 male, were maintained in separated cages at IDIBELL animal facility (specific pathogen free, SPF) under controlled conditions of temperature (21&#x02009;&#x000B1;&#x02009;1&#x000B0;C), humidity (55&#x02009;&#x000B1;&#x02009;5%), cycles of light/dark of 12/12&#x02009;h, and with food and water given <italic>ad libitum</italic>.</p>
</sec>
<sec id="S2-3">
<title>Serum Collection and Processing</title>
<p>Mice blood extraction was made without the need of anesthesia by submandibular bleeding (<xref ref-type="bibr" rid="B21">21</xref>). Serum was collected by mild centrifugation (10&#x02009;min, 1,200&#x02009;<italic>g</italic> at 4&#x000B0;C) and stored at &#x02212;80&#x000B0;C for further analysis. The human serum was collected from 11 human healthy donors, processed and stored under similar condition by Semiotik LLC.</p>
</sec>
<sec id="S2-4">
<title>Glycan Array Analysis</title>
<p>Glycochips were prepared by Semiotik LLC (Moscow, Russia) from 419 different synthetic amine-functionalized glycans, using <italic>N</italic>-hydroxysuccinimide-derivatized glass slides (slide H, Schott-Nexterion, Mainz, Germany), as described in Ref. (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B15">15</xref>). The glycan library included blood group antigens and some of the most frequently occurring terminal oligosaccharides, as well as core motifs of mammalian <italic>N</italic>- and <italic>O</italic>-linked glycoproteins and glycolipids, tumor-associated carbohydrate antigens, and polysaccharides from pathogenic bacteria. Synthetic glycan structures (&#x0003E;95% purity) are structurally the same as natural ones. Structures and NMR data of polysaccharides and related references are in <uri xlink:href="http://csdb.glycoscience.ru/bacterial">http://csdb.glycoscience.ru/bacterial</uri> (Zelinsky Institute of Organic chemistry, Moscow, Russia). All glycans were printed in six replicates. After printing, glycochips were incubated in an incubation chamber for 15&#x02009;min at 25&#x000B0;C with PBS plus 0.1% (v/v) Tween-20 (buffer 3) (Sigma-Aldrich, St. Louis, MO, USA), and the buffer was then carefully removed from the microchip surface using Whatman<sup>&#x000AE;</sup> filter paper (Sigma-Aldrich, St. Louis, MO, USA). BALB/c mouse sera were diluted (1:15) in PBS plus 1% (w/v) bovine serum albumin (BSA; Sigma-Aldrich, St. Louis, MO, USA) and 1% (v/v) Tween-20 (buffer 1). Diluted serum was spread over the slide surface and incubated with agitation (30&#x02009;rpm) at 37&#x000B0;C for 1.5&#x02009;h. After a round of washing steps with buffer 3, buffer 4 (PBS with 0.001% v/v Tween-20), and distilled water (Milli-Q grade), the glycochips were drained by mild centrifugation (1&#x02009;min, 175&#x02009;<italic>g</italic>, Eppendorf, Hamburg, Germany). The glycochips were then incubated for 1&#x02009;h at 37&#x000B0;C (30&#x02009;rpm) with goat anti-mouse IgG&#x02009;&#x0002B;&#x02009;IgM (H&#x02009;&#x0002B;&#x02009;L) conjugated to biotin (Thermo Fisher Scientific, Waltham, MA, USA) and diluted 200-fold in PBS plus 1% BSA and 0.1% Tween-20 (buffer 2). The unbound fraction was removed by repeating the same round of washing steps. Glass slides were incubated in darkness at 25&#x000B0;C for 45&#x02009;min (30&#x02009;rpm) with streptavidin labeled with Cy5 dye (GE Healthcare, Little Chalfont, Buckinghamshire, UK) and diluted 1:500 in buffer 2. After another round of washing, the glycochips were dried by airflow in darkness. Finally, the glycochips were scanned using a ScanArray GX Plus scanner (PerkinElmer, Waltham, MA, USA) with a laser (excitation wavelength of 633&#x02009;nm). All data analysis was performed with the ScanArray<sup>&#x000AE;</sup> Express Microarray Analysis System (PerkinElmer, Waltham, MA, USA). The binding results were expressed in relative fluorescence units (RFU) as median&#x02009;&#x000B1;&#x02009;median absolute deviation (MAD). Interactive exploration of multidimensional data (heat mapping and clustering analysis) was performed with the Hierarchical Clustering Explorer application developed by the University of Maryland, MD, USA.<xref ref-type="fn" rid="fn1"><sup>1</sup></xref></p>
</sec>
</sec>
<sec id="S3">
<title>Results</title>
<p>To avoid potentially confounding differences in genetic backgrounds, BALB/c mice were taken from inbred SPF populations (Harlan, France). The repertoire of circulating natural anti-carbohydrate antibodies was studied by PGA technology using a library of 419 different glycan structures. Although a previous study (<xref ref-type="bibr" rid="B22">22</xref>) showed that in normal mouse sera IgM can bind the F(ab&#x02032;)<sub>2</sub> of natural IgG autoantibodies, thus the dilution of normal serum decreases such IgM anti-IgG autoantibodies and unmasks these natural IgG autoantibodies, we have demonstrated that this dilution dependent effect is not present in our test system (<xref ref-type="bibr" rid="B15">15</xref>). Hence, we have used diluted sera (1:15) in all PGA determinations. In the case of mice due to the constraint in the serum amount, IgG and IgM anti-carbohydrate antibodies were simultaneously determined. Structural identity of polysaccharides was confirmed by NMR (deposited in <uri xlink:href="http://csdb.glycoscience.ru/bacterial">http://csdb.glycoscience.ru/bacterial</uri>). All carbohydrates used in the PGA structurally were the same as natural ones. However, density in the slide, length of spacer or type of carrier (protein or another polymer, peptide, etc.) can influence their activity. Therefore, their presentation on the array is quite possibly far from natural presentation (<xref ref-type="bibr" rid="B23">23</xref>, <xref ref-type="bibr" rid="B24">24</xref>). Nevertheless, this constraint of our <italic>in vitro</italic> approach had no impact on the main objective of our work because both sets of PGA determinations (humans and mice) were carried out using the same glycan library and conditions; hence, were similarly affected.</p>
<p>The data resulting from PGA experiments have been deposited in <italic>NCBI GEO Database</italic> (<xref ref-type="bibr" rid="B25">25</xref>) with the name &#x0201C;Repertoire of BALB/c mice natural anti-carbohydrate antibodies,&#x0201D; and are accessible through GEO Series accession number GSE97151.<xref ref-type="fn" rid="fn2"><sup>2</sup></xref></p>
<p>In the PGA, we considered values above 4,000 RFU as a positive signal of antibody binding (this value is &#x0007E;10% of the top glycans RFU), which were expressed as the median&#x02009;&#x000B1;&#x02009;median absolute deviation (MAD) (Table S1 in Supplementary Material). The majority of printed glycans were not targeted by any natural antibody present in the serum of BALB/c mice (Figure <xref ref-type="fig" rid="F1">1</xref>, in blue), and 71 carbohydrates (Figure <xref ref-type="fig" rid="F1">1</xref>, in red) demonstrated &#x02265;4,000 RFU in the PGA (see NCBI GEO Database: GSE97151). The top rank glycans included 12 with median signal intensities of bound antibodies &#x02265;10,000 RFU (Table <xref ref-type="table" rid="T1">1</xref>). Seven of them were recognized by serum antibodies from all the mice involved in the study, while other five glycans were targeted by serum samples of at least 80% of animals (Table <xref ref-type="table" rid="T1">1</xref>). Sulfated glycans comprised 50% of the high-binding glycans and &#x003B2;Gal-terminated oligosaccharides 25%. About gender, we did not observe marked differences between male and female in the majority of top rank glycans listed in Table <xref ref-type="table" rid="T1">1</xref>.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>BALB/c mice showed different repertoire of natural circulating anti-carbohydrate antibodies. Mouse (<italic>n</italic>&#x02009;&#x0003D;&#x02009;20) serum (1:15) was incubated with chips printed with 419 glycans. Chips were scanned using a ScanArray GX Plus reader and data were analyzed with the ScanArray<sup>&#x000AE;</sup> Express Microarray Analysis System (PerkinElmer). The binding results for IgM&#x02009;&#x0002B;&#x02009;IgG were expressed in relative fluorescence units (RFU) as median&#x02009;&#x000B1;&#x02009;median absolute deviation (MAD). In the heat map, blue and white colors represent binding signals, in RFU, lower than 4,000 (background); red color signals &#x02265;4,000 RFU (positive binding). F, female; M, male.</p></caption>
<graphic xlink:href="fimmu-08-01449-g001.tif"/>
</fig>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Specificity of carbohydrates targeting natural antibodies in BALB/c mice.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Glycan ID (&#x00023;)</th>
<th valign="top" align="left">Structure</th>
<th valign="top" align="left">Common name</th>
<th valign="top" align="center" colspan="2">Median and MAD as RFU</th>
<th valign="top" align="center">Number of mice showing RFU &#x02265;4,000 (%)</th>
<th valign="top" align="center" colspan="2">Number of human donors showing RFU &#x02265;4,000 (%)<hr/></th>
</tr>
<tr>
<th valign="top" align="center"/>
<th valign="top" align="center"/>
<th valign="top" align="center"/>
<th valign="top" align="center"/>
<th valign="top" align="center"/>
<th valign="top" align="center"/>
<th valign="top" align="center">IgM</th>
<th valign="top" align="center">IgG</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">060</td>
<td align="left" valign="top">6-O-Su-Gal&#x003B2;-sp<xref ref-type="table-fn" rid="tfn1"><sup>a</sup></xref></td>
<td align="center" valign="top"/>
<td align="center" valign="top">61,113</td>
<td align="center" valign="top">1,156</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">271</td>
<td align="left" valign="top">Gal&#x003B2;1-6Gal&#x003B2;1-4Glc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">53,622</td>
<td align="center" valign="top">1,934</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">55</td>
<td align="center" valign="top">27</td>
</tr>
<tr>
<td align="left" valign="top">802</td>
<td align="left" valign="top">Gal&#x003B2;1-3GalNAc(fur)&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">51,348</td>
<td align="center" valign="top">2,324</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">9</td>
</tr>
<tr>
<td align="left" valign="top">176</td>
<td align="left" valign="top">3-O-Su-Gal&#x003B2;1-4(6-O-Su)Glc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">43,008</td>
<td align="center" valign="top">9,342</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">9</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">166</td>
<td align="left" valign="top">GlcA&#x003B2;1-6Gal&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">39,105</td>
<td align="center" valign="top">2,993</td>
<td align="center" valign="top">85</td>
<td align="center" valign="top">18</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">150</td>
<td align="left" valign="top">3-O-Su-Gal&#x003B2;1-3GalNAc&#x003B1;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">37,943</td>
<td align="center" valign="top">3,232</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">18</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">437</td>
<td align="left" valign="top">GalNAc&#x003B1;1-3(Fuc&#x003B1;1-2)Gal&#x003B2;1-3GalNAc&#x003B2;-sp</td>
<td align="left" valign="top">A(type 4)</td>
<td align="center" valign="top">33,886</td>
<td align="center" valign="top">3,193</td>
<td align="center" valign="top">90</td>
<td align="center" valign="top">45</td>
<td align="center" valign="top">45</td>
</tr>
<tr>
<td align="left" valign="top">125</td>
<td align="left" valign="top">6-Bn-Gal&#x003B2;1-4GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">32,674</td>
<td align="center" valign="top">5,389</td>
<td align="center" valign="top">95</td>
<td align="center" valign="top">0</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">154</td>
<td align="left" valign="top">3-O-Su-Gal&#x003B2;1-3GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">32,651</td>
<td align="center" valign="top">3,954</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">64</td>
<td align="center" valign="top">36</td>
</tr>
<tr>
<td align="left" valign="top">177</td>
<td align="left" valign="top">3-O-Su-Gal&#x003B2;1-4(6-O-Su)GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">32,496</td>
<td align="center" valign="top">7,215</td>
<td align="center" valign="top">100</td>
<td align="center" valign="top">9</td>
<td align="center" valign="top">9</td>
</tr>
<tr>
<td align="left" valign="top">287</td>
<td align="left" valign="top">3-O-Su-Gal&#x003B2;1-3(Fuc&#x003B1;1-4)GlcNAc&#x003B2;-sp</td>
<td align="left" valign="top">SuLe<xref ref-type="table-fn" rid="tfn1"><sup>a</sup></xref></td>
<td align="center" valign="top">20,063</td>
<td align="center" valign="top">4,962</td>
<td align="center" valign="top">95</td>
<td align="center" valign="top">0</td>
<td align="center" valign="top">9</td>
</tr>
<tr>
<td align="left" valign="top">234</td>
<td align="left" valign="top">Gal&#x003B2;1-4(Fuc&#x003B1;1-3)GlcNAc&#x003B2;-sp</td>
<td align="left" valign="top">Le<sup>x</sup></td>
<td align="center" valign="top">13,573</td>
<td align="center" valign="top">2,635</td>
<td align="center" valign="top">80</td>
<td align="center" valign="top">0</td>
<td align="center" valign="top">0</td>
</tr>
</tbody>
</table>
<table-wrap-foot><p><italic>List of glycans with binding signals above 4,000 relative fluorescence units (RFU) in at least 80% of examined mice (<italic>n</italic>&#x02009;&#x0003D;&#x02009;20). Comparison with human data (<italic>n</italic>&#x02009;&#x0003D;&#x02009;11). The data obtained by Semiotik LLC, Russia, in the same conditions</italic>.</p>
<fn id="tfn1"><p><italic><sup>a</sup>sp means aminoethyl, aminoprolyl, or glycyl spacer</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<p>Most of the circulating anti-glycan antibodies found in mice were not widely represented in the human sera, as the number of human donors showing signals &#x02265;4,000 RFU in the PGA was limited or absent for the major part of these top rank glycan structures (Table <xref ref-type="table" rid="T1">1</xref>). Concomitantly, the high level circulating anti-glycan antibodies found in humans (Table <xref ref-type="table" rid="T2">2</xref>) were poorly represented among the animals assessed. Additionally, humans showed, like mice, significant variability between individuals in the level and diversity of circulating anti-glycan antibodies (Figure <xref ref-type="fig" rid="F2">2</xref>; Table S2 in Supplementary Material).</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Specificity of carbohydrates targeting natural antibodies in humans.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left" rowspan="2">Glycan ID (&#x00023;)</th>
<th valign="top" align="left" rowspan="2">Structure</th>
<th valign="top" align="left" rowspan="2">Common name</th>
<th valign="top" align="center" colspan="2">Number of human donors showing RFU &#x02265;4,000 (%)<hr/></th>
<th valign="top" align="center" rowspan="2">Number of mice showing RFU &#x02265;4,000 (%)</th>
</tr>
<tr>
<th valign="top" align="center">IgM</th>
<th valign="top" align="center">IgG</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">019</td>
<td align="left" valign="top">ManNAc&#x003B2;-sp<xref ref-type="table-fn" rid="tfn2"><sup>a</sup></xref></td>
<td align="center" valign="top"/>
<td align="center" valign="top">91</td>
<td align="center" valign="top">91</td>
<td align="center" valign="top">20</td>
</tr>
<tr>
<td align="left" valign="top">080</td>
<td align="left" valign="top">Gal&#x003B1;1-3GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">82</td>
<td align="center" valign="top">82</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">082</td>
<td align="left" valign="top">Gal&#x003B1;1-4GlcNAc&#x003B2;-sp</td>
<td align="left" valign="top">&#x003B1;LN</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">5</td>
</tr>
<tr>
<td align="left" valign="top">101</td>
<td align="left" valign="top">GalNAc&#x003B1;1-3GalNAc&#x003B2;-sp</td>
<td align="left" valign="top">Fs-2</td>
<td align="center" valign="top">82</td>
<td align="center" valign="top">91</td>
<td align="center" valign="top">5</td>
</tr>
<tr>
<td align="left" valign="top">149</td>
<td align="left" valign="top">GlcNAc&#x003B2;1-4(6-O-Su)GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">82</td>
<td align="center" valign="top">82</td>
<td align="center" valign="top">25</td>
</tr>
<tr>
<td align="left" valign="top">246</td>
<td align="left" valign="top">GlcNAc&#x003B2;1-2Gal&#x003B2;1-3GalNAc&#x003B1;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">91</td>
<td align="center" valign="top">82</td>
<td align="center" valign="top">0</td>
</tr>
<tr>
<td align="left" valign="top">256</td>
<td align="left" valign="top">GlcNAc&#x003B2;1-6(GlcNAc&#x003B2;1-4)GalNAc&#x003B1;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">91</td>
<td align="center" valign="top">91</td>
<td align="center" valign="top">40</td>
</tr>
<tr>
<td align="left" valign="top">278</td>
<td align="left" valign="top">GalNAc&#x003B1;1-3GalNAc&#x003B2;1-3Gal&#x003B2;-sp</td>
<td align="left" valign="top">Fs-3</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">82</td>
<td align="center" valign="top">n.d</td>
</tr>
<tr>
<td align="left" valign="top">375</td>
<td align="left" valign="top">Gal&#x003B1;1-4GlcNAc&#x003B2;1-3Gal&#x003B2;1-4GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">73</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">5</td>
</tr>
<tr>
<td align="left" valign="top">378</td>
<td align="left" valign="top">Gal&#x003B2;1-3GlcNAc&#x003B1;1-3Gal&#x003B2;1-4GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">82</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">45</td>
</tr>
<tr>
<td align="left" valign="top">399</td>
<td align="left" valign="top">Gal&#x003B2;1-3GlcNAc&#x003B1;1-3Gal&#x003B2;1-3GlcNAc&#x003B2;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">82</td>
<td align="center" valign="top">82</td>
<td align="center" valign="top">50</td>
</tr>
<tr>
<td align="left" valign="top">806</td>
<td align="left" valign="top">Gal&#x003B1;1-6Glc&#x003B1;-sp</td>
<td align="center" valign="top"/>
<td align="center" valign="top">82</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">20</td>
</tr>
<tr>
<td align="left" valign="top">808</td>
<td align="left" valign="top">Gal&#x003B1;1-6Glc&#x003B2;-sp</td>
<td align="left" valign="top">Melibiose</td>
<td align="center" valign="top">91</td>
<td align="center" valign="top">73</td>
<td align="center" valign="top">35</td>
</tr>
</tbody>
</table>
<table-wrap-foot><p><italic>List of glycans with binding signals above 4,000 relative fluorescence units (RFU) for both, IgM and IgG antibodies in at least 70% of human donors (<italic>n</italic>&#x02009;&#x0003D;&#x02009;11). Comparison with mice data (<italic>n</italic>&#x02009;&#x0003D;&#x02009;20). The data obtained by Semiotik LLC, Russia, in the same conditions</italic>.</p>
<fn id="tfn2"><p><italic><sup>a</sup>sp means aminoethyl, aminoprolyl, or glycyl spacer</italic>.</p></fn><p><italic>n.d, not determined</italic>.</p>
</table-wrap-foot>
</table-wrap>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Humans showed different repertoire of natural circulating anti-carbohydrate antibodies. Human (<italic>n</italic>&#x02009;&#x0003D;&#x02009;11) serum (1:15) was incubated with chips printed with 419 glycans. Chips were scanned using a ScanArray GX Plus reader and data were analyzed with the ScanArray<sup>&#x000AE;</sup> Express Microarray Analysis System (PerkinElmer). The binding results for IgM and IgG were expressed in relative fluorescence units (RFU) as median&#x02009;&#x000B1;&#x02009;median absolute deviation (MAD). In the heat map blue and white colors represent binding signals, in RFU, lower than 4,000 (background); red color signals &#x02265;4,000 RFU (positive binding).</p></caption>
<graphic xlink:href="fimmu-08-01449-g002.tif"/>
</fig>
</sec>
<sec id="S4" sec-type="discussion">
<title>Discussion</title>
<p>Murine and specifically BALB/c mice are among the most widely used inbred strains for animal experimentation to address almost every aspect of human health (<xref ref-type="bibr" rid="B17">17</xref>). This work demonstrates that genetically identical SPF mice should not be considered as &#x0201C;totally equivalents&#x0201D; from the immunological view as they present, despite some conservatism, different patterns of natural circulating anti-carbohydrate antibodies, which also differ dramatically from the conserved anti-carbohydrate antibody repertoire found in humans. Previous global analysis of natural antibody repertoires has revealed a marked conservation of reactivity patterns within inbred mouse strains (<xref ref-type="bibr" rid="B18">18</xref>&#x02013;<xref ref-type="bibr" rid="B20">20</xref>). However, some of these studies must be analyzed with caution due to the limited number of glycans assessed (<xref ref-type="bibr" rid="B20">20</xref>). This homogeneity among genetically identical animals was not observed in our study (<xref ref-type="bibr" rid="B25">25</xref>), and could be explained by the differences demonstrated in the analysis of the gut microbial population of inbred animals (<xref ref-type="bibr" rid="B26">26</xref>). If the production of natural anti-carbohydrate antibodies is triggered by the antigenic stimulation of microbiota, and this is different among inbred mice, fine specificity of these antibodies will not be identical.</p>
<p>There are also significant differences between mice and humans regarding the primary glycan specificities targeted by natural anti-carbohydrate antibodies. The discrepancy in repertoires is quite evident if top rank carbohydrates recognized by mice antibodies are directly compared with the top rank of circulating anti-glycan antibodies in humans (<xref ref-type="bibr" rid="B3">3</xref>). This disparity cannot be attributed to alloantibodies because in humans anti-blood group antibodies (like anti-A, anti-B, anti-Lewis) are not top rank immunoglobulins (<xref ref-type="bibr" rid="B3">3</xref>). The most intriguing appear to be the rather high level of anti-Le<sup>X</sup> in BALB/c mice. In humans, healthy donors never have antibodies to Le<sup>X</sup> epitope, Gal&#x003B2;1-4(Fuc&#x003B1;1-3)GlcNAc&#x003B2;, as well as to related so-called type 2 motif containing antigens (i.e., structures with Gal&#x003B2;1-4GlcNAc core) like Le<sup>Y</sup> and SiaLe<sup>X</sup>. The absence of these antibodies in humans is easy to explain: Le<sup>X</sup> termination is known as the structure of many glycoproteins and glycolipids of endothelial and blood group cells membrane. In contrast to humans, 80% of BALB/c mice demonstrated moderate levels of anti-Le<sup>X</sup> antibodies. The &#x0201C;moderate&#x0201D; means a level comparable or higher than, for example, titers of anti-A/B alloantibodies, or anti-&#x003B1;Gal xenoantibodies, which cause hemolytic reactions or organ rejection in humans. In mice, Le<sup>X</sup> is known as stage-specific embryonic antigen-III and plays a crucial role in neurogenesis, embryogenesis, and reproduction system (<xref ref-type="bibr" rid="B27">27</xref>, <xref ref-type="bibr" rid="B28">28</xref>). Why in BALB/c mice the antibodies coexist with cognate antigen without immunologic attack remains unclear. Notably, other mice strains (<xref ref-type="bibr" rid="B29">29</xref>) also found to have anti-Le<sup>X</sup> NAbs, with an apparent function to protect from Schistosoma parasites (<xref ref-type="bibr" rid="B30">30</xref>). Concurrently, top anti-glycan antibodies conserved among humans (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B8">8</xref>), such as GlcNAc&#x003B2;-terminated, GlcNAc&#x003B1;-terminated, Rha, Le<sup>C</sup>, Fs/A<sub>di</sub>, asialo-GM1, and Fuc&#x003B1;1-3(4)GlcNAc, are completely missing in mice, or, like in case of anti-blood group P<sub>1</sub> and P<sup>k</sup> trisaccharides, at very low level. Although we show with the glycan array that BALB/c and human IgM have different glycan binding specificities, these differences may not significantly alter the functional effect of human or mouse IgM on murine cells as shown in prior studies (<xref ref-type="bibr" rid="B31">31</xref>&#x02013;<xref ref-type="bibr" rid="B33">33</xref>).</p>
<p>The differences observed in the repertoire of anti-carbohydrate antibodies in genetically identical BALB/c mice, and between these mice and humans, also reflect the uncertainties about the functional role and origin of NAbs. Three hypotheses attempt to explain the development of these antibodies (<xref ref-type="bibr" rid="B6">6</xref>). The first suggests the specific stimulation by new antigens of the bacterial microbiota; the second is based on the response to endogenous degradation products of normal cells, not to neoantigens; and the third proposes that NAbs result from the exposure to molecular patterns. The latter are different conserved molecules located close to each other that can be divided into two groups: MAMPs, microorganism associated molecular patterns, composed of polysaccharides, and DAMPs, damage associated molecular patterns, constituted by proteins. In the case of polysaccharides, human anti-glycan antibodies, including anti-A/B allo-agglutinins, antibodies to glycoprotein <italic>O</italic>-chain glycans Gal&#x003B2;1-3GalNAc&#x003B1; (TF) and GalNAc&#x003B1; (Tn), are risen due to contact of the newborn immune system with intestinal microbiota (<xref ref-type="bibr" rid="B34">34</xref>, <xref ref-type="bibr" rid="B35">35</xref>). Pivotal role in this phenomenon might play bacterial polysaccharides, structure of which mimics ABH blood groups (<xref ref-type="bibr" rid="B7">7</xref>, <xref ref-type="bibr" rid="B36">36</xref>), TF/Tn or other related mammalian glycans (<xref ref-type="bibr" rid="B37">37</xref>, <xref ref-type="bibr" rid="B38">38</xref>). From the moment of birth, the gastrointestinal tract and respiratory system in mammals are actively colonized by bacteria. About 103 species of non-pathogenic (commensal) bacteria form the basis of normal intestinal microbiota (<xref ref-type="bibr" rid="B39">39</xref>), although the total number of species is estimated to be greater. These bacteria possess millions of antigens, and they are capable to prime those B-1 lymphocytes which are genetically selected for the synthesis of NAbs (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B40">40</xref>). It was shown that up to 90% of the immunoglobulin-secreting cells of the normal mouse intestine produce natural Abs that are absent in germ-free mice (<xref ref-type="bibr" rid="B41">41</xref>, <xref ref-type="bibr" rid="B42">42</xref>). Thus, the appearance of a particular natural anti-carbohydrate antibody requires &#x0201C;two keys&#x0201D;&#x02014;the existence of B-1 cell gene and the priming with bacterial antigen (a mimotope of the cognate antigen). Bacteria are the best source for anti-carbohydrate antibody priming for two additional reasons: (1) appearance only after birth, (2) the need of toll-like receptors for recognition by B-1 cells; this mechanism excludes priming of B-1 cells with auto-antigens at the embryonic stage (<xref ref-type="bibr" rid="B6">6</xref>). Genetics of B-cells, as well as microbiotas of humans and mice are different, so it is not surprising that the resulting repertoires of NAbs are not similar. At the same time, since some of the NAbs (for instance, anti-A/B) play a similar physiologically active role, they are similar in different species.</p>
<p>In summary, the results presented here indicate that the repertoires of circulating natural anti-glycan antibodies in BALB/c mice appear to be not identical for genetically identical individual animals. Additionally, mice antibody repertoire shows significant differences to that present in humans, suggesting a caution when using mice as an animal model for investigation of human NAbs for biomedical studies.</p>
</sec>
<sec id="S5">
<title>Ethics Statement</title>
<p>Animals were handled in strict accordance with good animal practice as defined by the relevant local animal welfare bodies. All animal procedures were supervised and approved by Bellvitge Biomedical Research Institute (IDIBELL) ethics committee for animal experimentation and the Catalonia Government. The care and handling of the animals were conformed to the Guide for the Care and Use of Laboratory Animals published by the US National Institutes of Health (NIH Publication no. 85-23 revised 1996) and the European Agreement of Vertebrate Animal Protection for Experimental Use (86/609).</p>
</sec>
<sec id="S6" sec-type="author-contributor">
<title>Author Contributions</title>
<p>Contributions of the authors can be summarized as follows: performed the experiments: DB-G and NK. Analyzed the data: DB-G, NK, NS, NB, and RM. Contributed reagents/materials/analysis tools: NB and RM. Wrote the article: DB-G. Contributed with ideas: DB-G, NK, NS, NB, and RM.</p>
</sec>
<sec id="S7">
<title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<ack>
<p>This work was supported by &#x0201C;Fondo de Investigaciones Sanitarias&#x0201D; (FIS) grant PI13/01098 from Carlos III Health Institute, Spanish Ministry of Health. DB-G was benefited of a post-doctoral research position funded by the European Union Seventh Framework Programme (FP7/2007-2013) under the Grant Agreement 603049 (TRANSLINK). Work of NK, NS, and NB was supported by grant &#x00023;14-50-00131 of Russian Science Foundation. None of the sponsors were directly involved in the study. DB-G wants to express his gratitude to Laia Muxi, Marta Broto, and J. Pablo Salvador for excellent technical assistance, and Alexander Rakitko for assistance in statistical analysis.</p>
</ack>
<sec id="S8" sec-type="supplementary-material">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at <uri xlink:href="http://www.frontiersin.org/article/10.3389/fimmu.2017.01449/full&#x00023;supplementary-material">http://www.frontiersin.org/article/10.3389/fimmu.2017.01449/full&#x00023;supplementary-material</uri>.</p>
<supplementary-material xlink:href="data_sheet_1.pdf" id="SM1" mimetype="applicationn/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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