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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Hum. Neurosci.</journal-id>
<journal-title>Frontiers in Human Neuroscience</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Hum. Neurosci.</abbrev-journal-title>
<issn pub-type="epub">1662-5161</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fnhum.2017.00626</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Neuroscience</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Aberrant Functional Network Connectivity as a Biomarker of Generalized Anxiety Disorder</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Qiao</surname> <given-names>Jianping</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/182132/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Li</surname> <given-names>Anning</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Cao</surname> <given-names>Chongfeng</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Wang</surname> <given-names>Zhishun</given-names></name>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/192999/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Sun</surname> <given-names>Jiande</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Xu</surname> <given-names>Guangrun</given-names></name>
<xref ref-type="aff" rid="aff8"><sup>8</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x002A;</sup></xref>
</contrib></contrib-group>
<aff id="aff1"><sup>1</sup><institution>School of Physics and Electronics, Shandong Normal University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, Shandong Normal University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>Institute of Data Science and Technology, Shandong Normal University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Radiology, Qilu Hospital of Shandong University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<aff id="aff5"><sup>5</sup><institution>Department of Emergency, Jinan Central Hospital Affiliated to Shandong University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<aff id="aff6"><sup>6</sup><institution>Department of Psychiatry, Columbia University</institution>, <addr-line>New York, NY</addr-line>, <country>United States</country></aff>
<aff id="aff7"><sup>7</sup><institution>School of Information Science and Engineering, Shandong Normal University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<aff id="aff8"><sup>8</sup><institution>Department of Neurology, Qilu Hospital of Shandong University</institution>, <addr-line>Jinan</addr-line>, <country>China</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: <italic>Jussi Tohka, University of Eastern Finland, Finland</italic></p></fn>
<fn fn-type="edited-by"><p>Reviewed by: <italic>Feng Liu, Tianjin Medical University General Hospital, China; Xu Lei, Southwest University, China</italic></p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x002A;Correspondence: <italic>Guangrun Xu, <email>xuguangrun@163.com</email></italic></p></fn>
<fn fn-type="other" id="fn002"><p><sup>&#x2020;</sup><italic>These authors have contributed equally to this work.</italic></p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>19</day>
<month>12</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>11</volume>
<elocation-id>626</elocation-id>
<history>
<date date-type="received">
<day>29</day>
<month>08</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>08</day>
<month>12</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2017 Qiao, Li, Cao, Wang, Sun and Xu.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Qiao, Li, Cao, Wang, Sun and Xu</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Neural disruptions during emotion regulation are common of generalized anxiety disorder (GAD). Identifying distinct functional and effective connectivity patterns in GAD may provide biomarkers for their diagnoses. This study aims to investigate the differences of features of brain network connectivity between GAD patients and healthy controls (HC), and to assess whether those differences can serve as biomarkers to distinguish GAD from controls. Independent component analysis (ICA) with hierarchical partner matching (HPM-ICA) was conducted on resting-state functional magnetic resonance imaging data collected from 20 GAD patients with medicine-free and 20 matched HC, identifying nine highly reproducible and significantly different functional brain connectivity patterns across diagnostic groups. We then utilized Granger causality (GC) to study the effective connectivity between the regions that identified by HPM-ICA. The linear discriminant analysis was finally used to distinguish GAD from controls with these measures of neural connectivity. The GAD patients showed stronger functional connectivity in amygdala, insula, putamen, thalamus, and posterior cingulate cortex, but weaker in frontal and temporal cortex compared with controls. Besides, the effective connectivity in GAD was decreased from the cortex to amygdala and basal ganglia. Applying the ICA and GC features to the classifier led to a classification accuracy of 87.5%, with a sensitivity of 90.0% and a specificity of 85.0%. These findings suggest that the presence of emotion dysregulation circuits may contribute to the pathophysiology of GAD, and these aberrant brain features may serve as robust brain biomarkers for GAD.</p>
</abstract>
<kwd-group>
<kwd>generalized anxiety disorder</kwd>
<kwd>brain connectivity</kwd>
<kwd>independent component analysis</kwd>
<kwd>Granger causality</kwd>
<kwd>classification</kwd>
</kwd-group>
<contract-num rid="cn001">61603225</contract-num>
<contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="65"/>
<page-count count="10"/>
<word-count count="0"/>
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</article-meta>
</front>
<body>
<sec><title>Introduction</title>
<p>Generalized anxiety disorder (GAD) is one of the most common mental disorders characterized by excessive anxiety and worry that is not focused on a specific situation or object. The GAD is highly prevalent in the general population. Patients with GAD often suffer from a variety of anxiety-related physical symptoms like difficulty concentrating, irritability, muscle tension, and disturbed sleep which impair their quality of life and social functioning (<xref ref-type="bibr" rid="B47">Paulus and Stein, 2010</xref>; <xref ref-type="bibr" rid="B34">Liu et al., 2015b</xref>; <xref ref-type="bibr" rid="B27">Li Y. et al., 2016</xref>; <xref ref-type="bibr" rid="B4">Buff et al., 2017</xref>; <xref ref-type="bibr" rid="B43">Moon and Jeong, 2017</xref>). To improve the level of both basic GAD research and its clinical diagnosis, it is essential to understand the pathophysiological mechanisms of GAD and explore a valid and objective biomarker to distinguish patients with GAD from HC.</p>
<p>Previous brain imaging studies have revealed neural differences in GAD compared with HC in brain areas associated with the emotion dysregulation, cognitive deficits, and/or reward processing, which may be important in the pathophysiology of GAD. Individuals with GAD exhibited over-engagement of amygdala and inferior frontal gyrus during the viewing of negative images on an emotion regulation task, compared to HC (<xref ref-type="bibr" rid="B17">Fitzgerald et al., 2017</xref>). A reduced correlation between prediction error and activity within the ventromedial prefrontal cortex and striatum of GAD was shown on a decision making task, lead to their decision-making deficits, and excessive worry about everyday problems (<xref ref-type="bibr" rid="B63">White et al., 2017</xref>). Another task-based functional magnetic resonance imaging (fMRI) study has reported significantly higher activity in the hippocampus during the delayed-response working memory (WM) task for GAD patients, suggesting that neural activation patterns in patients with GAD are changed by the effect of neutral and anxiety-inducing distractors during a delayed response WM task (<xref ref-type="bibr" rid="B42">Moon and Jeong, 2015</xref>). In addition, larger volumes in amygdala (<xref ref-type="bibr" rid="B11">De Bellis et al., 2000</xref>; <xref ref-type="bibr" rid="B53">Schienle et al., 2011</xref>), putamen (<xref ref-type="bibr" rid="B28">Liao et al., 2013</xref>, <xref ref-type="bibr" rid="B29">2014a</xref>), and altered gray matter volumes in the thalamus, hippocampus, insula, posterior cingulate, and superior temporal gyrus (STG) in GAD patients were reported in the structure magnetic resonance imaging (sMRI) studies (<xref ref-type="bibr" rid="B12">De Bellis et al., 2002</xref>; <xref ref-type="bibr" rid="B58">Strawn et al., 2013</xref>; <xref ref-type="bibr" rid="B43">Moon and Jeong, 2017</xref>). Diffusion tensor imaging (DTI) has shown that the GAD patients have increased fractional anisotropy (FA) in the amygdala (<xref ref-type="bibr" rid="B65">Zhang et al., 2013</xref>) and postcentral gyrus (<xref ref-type="bibr" rid="B64">Zhang et al., 2011</xref>), while reduced FA in bilateral uncinate fasciculus, body of corpus callosum, inferior fronto-occipital fasciculus, inferior longitudinal fasciculus, and corona radiate (<xref ref-type="bibr" rid="B30">Liao et al., 2014b</xref>; <xref ref-type="bibr" rid="B61">Wang et al., 2016</xref>).</p>
<p>Resting-state fMRI has been widely used to study the mechanism of brain function, especially in the clinical study, due to simple operation, no task stimulation, as well as the stable and reliable results. Resting-state fMRI studies have reported decreased functional connectivity (FC) between amygdala and prefrontal cortex in adults (<xref ref-type="bibr" rid="B15">Etkin et al., 2009</xref>; <xref ref-type="bibr" rid="B24">Hilbert et al., 2014</xref>) and the dysconnectivity has been considered as a longitudinal biomarker of symptom changes in GAD (<xref ref-type="bibr" rid="B36">Makovac et al., 2016</xref>). Adolescents with GAD exhibited disruptions in amygdala-based intrinsic FC networks that included regions in medial prefrontal cortex, insula, and cerebellum (<xref ref-type="bibr" rid="B52">Roy et al., 2013</xref>). The increased FC between the amygdala and the temporal pole was also revealed in GAD compared to HC in both eyes-open and eyes-closed resting-state fMRI (<xref ref-type="bibr" rid="B26">Li W. et al., 2016</xref>). The set of studies supports the brain structure abnormality and the functional deficit in GAD patients, suggesting that the neural system-related emotion regulation is dysfunctional. However, whether and how the brain neural alterations differ in individuals with GAD remains unclear.</p>
<p>Machine learning techniques have played an important role in exploring the brain differences between patients with anxiety disorder and HC. Recently, one study has employed resting-state functional MRI data to investigate multivariate classification of social anxiety disorder by using whole-brain FC (<xref ref-type="bibr" rid="B33">Liu et al., 2015a</xref>). Neural face processing in the fear network and gray matter volume alterations over the whole brain were also used to separate anxiety disorder from controls (<xref ref-type="bibr" rid="B18">Frick et al., 2014</xref>). These studies demonstrated that FC and structural alterations had good diagnostic potential for anxiety disorder which may be used as a complementary tool in clinical diagnosis.</p>
<p>Independent component analysis (ICA) is a multivariate method for blind source separation which has been widely applied for analyzing neuroimaging data (<xref ref-type="bibr" rid="B5">Calhoun et al., 2009</xref>). As a data-driven approach, ICA can be used to identify brain networks in resting-state fMRI without using a priori information of the source signals. Each independent component (IC) provides a grouping of brain regions that share the same pattern.</p>
<p>At present, there are many methods to measure the effective connectivity such as structural equation model (SEM), dynamic causal model, and Granger causality (GC). The SEM and dynamic causal model does not contain time information, which also need to select interaction region in advance. A mistake on the model assumption will lead to a wrong result. GC overcomes these limitations effectively. GC analysis is very consistent with the actual situation because it does not require any prior knowledge and considers the effect of the time on the results (<xref ref-type="bibr" rid="B37">Marinazzo et al., 2011</xref>; <xref ref-type="bibr" rid="B7">Cohen Kadosh et al., 2016</xref>).</p>
<p>The aim of the current study was to examine whether brain functional and effective connectivity networks differ in GAD. We applied the ICA with hierarchical partner matching (HPM-ICA) to assess the brain FC networks. The causal influence between the IC was estimated by utilizing GC method. The machine learning was finally used to distinguish the GAD from HC by combining the features of functional and effective connectivity brain networks. We hypothesized that we would detect brain connectivity differences in GAD within the cortical&#x2013;subcortical neural systems that support emotion dysregulation and these feature patterns could be served as biomarkers for GAD.</p>
</sec>
<sec id="s1" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec><title>Participants</title>
<p>Twenty participants with GAD who met the criteria for DSM-IV (13 females, 7 males, mean age 41.5 &#x00B1; 10.7 years, range 30&#x2013;50 years) were recruited from the psychological outpatient clinic at the Qilu Hospital of Shandong University. Twenty group matched by age and sex HC (13 females, 7 males, mean age 40.1 &#x00B1; 9.8 years, range 30&#x2013;49 years) were recruited by public advertisement to take part in the study. All GAD participants had been diagnosed by a licensed psychiatrist before enrolment. All participants were right-handed, native Chinese speakers. Exclusion criteria were: age younger than 18 years, lifetime history of increased intracranial pressure, seizure disorder, stroke, brain tumor, multiple sclerosis or brain surgery, cognitive impairment, history of substance-use disorder, an active autoimmune, endocrine, vascular disorder affecting the brain, any unstable cardiac disease, hypertension, and severe renal, liver insufficiency. All patients and controls were medication free for at least 1 month before enrolment. The safety screening form and informed consent form were approved by the Institutional Review Board of Qilu Hospital of Shandong University. We obtained written informed consent from all participants.</p>
<p>Psychiatric diagnoses were assessed using the Structured Clinical Interview for DSM-IV (SCID-I). We evaluated anxiety severity on the day of MRI scan using the assessment of the Hamilton Rating Scale for Anxiety (<xref ref-type="bibr" rid="B21">Hamilton, 1959</xref>; <xref ref-type="bibr" rid="B13">Deshpande et al., 2010</xref>). Anxiety severity ranged from mild to severe, with an average severity of 19.10 &#x00B1; 5.68 for GAD. The average HAMA score of HC is 0.65 &#x00B1; 0.77. The Hamilton Rating Scale for Depression (HAMD) (<xref ref-type="bibr" rid="B22">Hamilton, 1967</xref>) was also administered. The mean HAMD score of GAD is 7.86 &#x00B1; 3.22 and the mean HAMD score of HC is 0.71 &#x00B1; 0.90. All participants were informed of the safety and eligibility criteria for fMRI scanning: no neurological conditions and no implanted ferrous metal.</p>
</sec>
<sec><title>Image Acquisition</title>
<p>Images were acquired on a Siemens Verio 3.0 Tesla MRI scanner (Siemens, Erlangen, Germany) using a 32-channel head coil at the Qilu Hospital of Shandong University. We used earplugs to reduce scanner noise and restraining foam pads to reduce head motion. Participants were instructed to rest with their eyes closed but not to fall asleep during scanning. When the scanning process was completed, we asked all the participants whether they were asleep during scanning. In addition, the participants had involuntary movement of body if they were asleep, leading to the motion artifact of fMRI data. The two rules controlled the participants who fall asleep during scanning were excluded in this study. Resting-state fMRI data were acquired using a single-shot gradient-echo planar imaging (EPI) sequence. Thirty-six contiguous axial slices were acquired along the AC&#x2013;PC plane, with a 64 &#x00D7; 64 matrix and 20 cm field of view (voxel size = 3.4375 &#x00D7; 3.4375 &#x00D7; 3.0 mm<sup>3</sup>, repetition time = 2000 ms, echo time = 30 ms, flip angle = 90 degrees, slice thickness = 3 mm). The sequence took 8 min, resulting in a total of 240 volumes.</p>
</sec>
<sec><title>Image Analysis</title>
<sec><title>HPM-ICA-Based Functional Connectivity</title>
<p>Firstly, we preprocessed the resting-state fMRI images by using SPM12 (Welcome Department of Imaging Neuroscience, London, United Kingdom) that was run under MATLAB. The functional scans were slice timing-corrected, spatially realigned to the first scan to correct for head movements, normalized to the Montreal Neurological Institute (MNI) coordinate system and spatially smoothed using an isotropic 8 mm full-width at half-maximum (FWHM) Gaussian kernel.</p>
<p>Secondly, we applied the ICA with HPM-ICA, which we proposed and published previously (<xref ref-type="bibr" rid="B62">Wang et al., 2011</xref>; <xref ref-type="bibr" rid="B50">Qiao et al., 2015</xref>, <xref ref-type="bibr" rid="B49">2017</xref>), to the preprocessed fMRI data to estimate the brain FC networks. In this method, we used ICA to generate <italic>N</italic> ICs for each participant and then used partner matching to match these components across the participants, yielding clusters of components that matched across participants. For each of these clusters, we ran one-sample <italic>t</italic>-tests to generate cluster maps. The main limitation of simple partner matching is that it assumes a fixed number <italic>N</italic> of IC, but that number is not known <italic>a priori</italic>, and it may even vary across participants. We therefore used a hierarchical approach that includes a second level of partner matching. In this second level, we used various numbers of components (from 20 to 120 with increments of 10). For each of these sets of component numbers, we performed the first-level partner matching to generate the cluster maps. We then applied partner matching again across these cluster maps (the second level), to determine which clusters mapped across sets containing differing numbers of components. This hierarchical procedure yielded clusters of clusters. For each cluster of clusters, we then selected the cluster that had the highest Cronbach&#x2019;s alpha for further analyses. In this way, we identified eight reproducible clusters across all the participants.</p>
<p>Finally, group-level statistical analysis was applied to detect random effects of group difference in FC between GAD and HC. We entered the <italic>z</italic>-score maps of the eight clusters of ICs into a second-level factorial analysis, covarying for age and sex. All the statistical contrasts were corrected for multiple comparisons to <italic>p</italic> &#x003C; 0.01 by enforcing a minimum cluster extent of 30 voxels. The main idea of the cluster extent threshold method is to model the entire imaging volume, assume an individual voxel type I error, smooth the volume with a Gaussian kernel, and then count the number of voxel clusters of each size. After a number of iterations, a probability associated with each cluster extent is calculated, and the cluster extent threshold yielding the desired correction for multiple comparisons can be enforced (<xref ref-type="bibr" rid="B56">Slotnick et al., 2003</xref>; <xref ref-type="bibr" rid="B55">Slotnick, 2017</xref>). The cluster size was obtained by using custom software written in MATLAB (<xref ref-type="bibr" rid="B56">Slotnick et al., 2003</xref>). We ran 10,000 Monte Carlo simulations based on individual voxel. In a single simulation, we smoothed the activation map by using a three-dimensional 8-mm FWHM Gaussian kernel. The Pearson&#x2019;s correlation analysis was also performed in GAD patients to investigate the correlation between the anxiety severity (HAMA score) and brain connectivity.</p>
</sec>
<sec><title>Granger Causality-Based Effective Connectivity</title>
<p>Granger causality was applied to estimate the effective connectivity or causal influences between the IC that were identified using the HPM-ICA method. The time courses of these components were used to compute GC indices (GCIs) between them. We then used two-sample <italic>t</italic>-tests to detect group difference in GCIs between GAD and HC.</p>
</sec>
<sec><title>Feature Selection and Classification</title>
<p>A feature selection technique is often performed before classification to avoid the curse of dimensionality and enhance generalization of the classifier. The central premise when using feature selection is that the data contain some features that are either redundant or irrelevant, and can thus be removed without incurring much loss of information. In this study the functional and effective connectivity were considered together to serve as features and two-sample <italic>t</italic>-tests were performed to determine the features that showed differences between the GAD and HC. Features with significant differences (<italic>p</italic> &#x003C; 0.05, uncorrected) between the two groups of training set were selected. We used two classifiers to distinguish GAD from HC which were the maximum uncertainty linear discriminant analysis (MLDA) classifier (<xref ref-type="bibr" rid="B9">Dai et al., 2012</xref>) and a kernel support vector machine (SVM) in which a Gaussian kernel with width of 0.5 was used. A leave-one-out cross-validation (LOOCV) strategy was used to evaluate the performance of a classifier. The feature selection was carried out only on the training set of each LOOCV fold which avoided the introduction of bias.</p>
<p>We also assessed the classification contribution of each feature in the MLDA classifier by using the coefficients of the discrimination hyperplane which measured the weights of the features. The selected features were consistent in each iteration of LOOCV, but feature weights were based on a slightly different subset of the data. Therefore, the final feature weights were the average across all folds of LOOCV.</p>
</sec>
</sec></sec>
<sec><title>Results</title>
<sec><title>Reproducible Independent Components</title>
<p>We applied HPM-ICA to identify eight clusters of IC that were significantly reproducible in their spatial patterns across GAD and control participants. The general linear model in SPM was used to perform a one-sample <italic>t</italic>-test on each of the eight clusters to generate eight random-effect IC maps that represented statistically significant FC (<bold>Figure <xref ref-type="fig" rid="F1">1</xref></bold>). Then we compared the eight ICs of GAD and HC in a second-level, random-effects analysis. We generated eight masks from all GAD and HC corresponding to each IC or resting-state network (RSN) from one-sample <italic>t</italic>-tests results. The group comparisons were restricted or masked to the voxels within corresponding resting-state networks masks (<xref ref-type="bibr" rid="B57">Sorg et al., 2007</xref>; <xref ref-type="bibr" rid="B40">Mohammadi et al., 2009</xref>; <xref ref-type="bibr" rid="B31">Liao et al., 2010</xref>). Compared with controls, GAD showed significantly stronger connectivity in the left amygdala, right insula, right putamen, right posterior cingulate cortex (PCC), right thalamus, while weaker FC in the left middle frontal gyrus (MFG), right superior frontal gyrus (SFG), and left middle temporal gyrus (MTG) (<bold>Table <xref ref-type="table" rid="T1">1</xref></bold> and <bold>Figure <xref ref-type="fig" rid="F1">1</xref></bold>). The anxiety severity (HAMA score) had a significant positive correlation with the FC in the left amygdala in GAD participants (<italic>r</italic> = 0.80, <italic>p</italic> &#x003C; 0.001) (<bold>Figure <xref ref-type="fig" rid="F2">2</xref></bold>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Comparisons of FC between GAD and HC. The first three columns display the random-effect group activity maps detected from the GAD. The first column is a coronal view, the second is a sagittal view, and the third is an axial view. The second three columns display the group activity maps detected from the HC. Each row displays one group activity map generated by applying a one-sample <italic>t</italic>-test to one of the eight clusters of IC. Any two group activity maps within the same row across the first three and second three columns are significantly similar to one another in their spatial configurations. The last three columns display <italic>t</italic>-contrast maps comparing the group activity maps from the GAD and control participants. The images show that FC was greater in GAD compared with HC participants in the amygdala, insular, putamen, thalamus, and posterior cingulate cortex (PCC) (shown in red), but their FC was weaker in the middle frontal gyrus (MFG), Superior frontal gyrus (SFG), and MTG (shown in blue).</p></caption>
<graphic xlink:href="fnhum-11-00626-g001.tif"/>
</fig>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Regional locations and significant comparisons of the independent component maps between GAD and healthy controls.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Brain areas</th>
<th valign="top" align="center" colspan="2">Location<hr/></th>
<th valign="top" align="center" colspan="3">Peak location<hr/></th>
<th valign="top" align="center"><italic>T-</italic>statistic</th>
</tr>
<tr>
<td valign="top" align="left"></td>
<th valign="top" align="center">Side</th>
<th valign="top" align="center">BA</th>
<th valign="top" align="center"><italic>x</italic></th>
<th valign="top" align="center"><italic>y</italic></th>
<th valign="top" align="center"><italic>z</italic></th>
<td valign="top" align="center"></td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="7"><bold>GAD vs. HC (positive)</bold></td></tr>
<tr>
<td valign="top" align="left">Amygdala</td>
<td valign="top" align="center">L</td>
<td valign="top" align="center">NA</td>
<td valign="top" align="center">&#x2013;24</td>
<td valign="top" align="center">&#x2013;4</td>
<td valign="top" align="center">&#x2013;19</td>
<td valign="top" align="center">+2.94</td>
</tr>
<tr>
<td valign="top" align="left">Insula</td>
<td valign="top" align="center">R</td>
<td valign="top" align="center">16</td>
<td valign="top" align="center">46</td>
<td valign="top" align="center">&#x2013;1</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">+2.72</td>
</tr>
<tr>
<td valign="top" align="left">Putamen</td>
<td valign="top" align="center">R</td>
<td valign="top" align="center">NA</td>
<td valign="top" align="center">26</td>
<td valign="top" align="center">8</td>
<td valign="top" align="center">7</td>
<td valign="top" align="center">+2.65</td>
</tr>
<tr>
<td valign="top" align="left">Thalamus</td>
<td valign="top" align="center">R</td>
<td valign="top" align="center">NA</td>
<td valign="top" align="center">17</td>
<td valign="top" align="center">&#x2013;18</td>
<td valign="top" align="center">13</td>
<td valign="top" align="center">+2.34</td>
</tr>
<tr>
<td valign="top" align="left">Posterior cingulate cortex (PCC)</td>
<td valign="top" align="center">R</td>
<td valign="top" align="center">23</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">&#x2013;40</td>
<td valign="top" align="center">13</td>
<td valign="top" align="center">+3.19</td>
</tr>
<tr>
<td valign="top" align="left" colspan="7"><bold>GAD vs. HC (negative)</bold></td></tr>
<tr>
<td valign="top" align="left">Middle frontal gyrus (MFG)</td>
<td valign="top" align="center">L</td>
<td valign="top" align="center">9</td>
<td valign="top" align="center">&#x2013;27</td>
<td valign="top" align="center">13</td>
<td valign="top" align="center">60</td>
<td valign="top" align="center">&#x2013;3.23</td>
</tr>
<tr>
<td valign="top" align="left">Superior frontal gyrus (SFG)</td>
<td valign="top" align="center">R</td>
<td valign="top" align="center">8</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">53</td>
<td valign="top" align="center">6</td>
<td valign="top" align="center">&#x2013;2.97</td>
</tr>
<tr>
<td valign="top" align="left">Middle temporal gyrus (MTG)</td>
<td valign="top" align="center">L</td>
<td valign="top" align="center">21</td>
<td valign="top" align="center">&#x2013;48</td>
<td valign="top" align="center">&#x2013;56</td>
<td valign="top" align="center">13</td>
<td valign="top" align="center">&#x2013;3.06</td></tr>
</tbody></table>
<table-wrap-foot>
<attrib><italic>All coordinates are in the MNI ICBM152 space. NA, not applicable.</italic></attrib>
</table-wrap-foot>
</table-wrap>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Correlation of <italic>z</italic>-score for blood-oxygen-level-dependent (BOLD) activity, an fMRI index of neural activity, in the IC from the left amygdala with the severity of anxiety in GAD (<italic>z</italic>-transformed total score in the measures). BOLD correlated with symptom severity, indicating that greater neural activity accompanied greater severe symptoms across GAD participants.</p></caption>
<graphic xlink:href="fnhum-11-00626-g002.tif"/>
</fig>
</sec>
<sec><title>Granger Causality Interactions</title>
<p>We used GCIs to assess the effective connectivity between the IC involved in emotion dysregulation brain networks, including amygdala, insula, putamen, thalamus, PCC, MFG, SFG, and MTG. Basal ganglia are involved in many neuronal pathways including emotional, motivational, associative, and cognitive functions. The striatum (caudate nucleus, putamen, and nucleus accumbens) receive inputs from all cortical areas (top-down) and, throughout the thalamus, project principally to frontal lobe areas (bottom-up) (<xref ref-type="bibr" rid="B23">Herrero et al., 2002</xref>). Therefore, two types of causality indices were produced: the connectivity from region A to B (top-down), the connectivity from region A to B through region C, where C indicated activity in the thalamus when assessing causal influences from the basal ganglia to the cortices (bottom-up) (<xref ref-type="bibr" rid="B62">Wang et al., 2011</xref>). The effective connectivity was weaker in GAD than in HC in connections from the MFG to amygdala, from MTG to amygdala, from the MFG to putamen, and from the putamen to SFG via the thalamus (<bold>Table <xref ref-type="table" rid="T2">2</xref></bold> and <bold>Figure <xref ref-type="fig" rid="F3">3</xref></bold>).</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Comparisons of statistically significant GCIs of the interregional connections of the reproducible IC.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left"></td>
<th valign="top" align="center">GAD</th>
<th valign="top" align="center">HC</th>
<th valign="top" align="center">GAD vs. HC</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">MFG &#x2192; Amygdala</td>
<td valign="top" align="center">0.125 &#x00B1; 0.054, <italic>p</italic> = 4.95<italic>E</italic>-08</td>
<td valign="top" align="center">0.225 &#x00B1; 0.108, <italic>p</italic> = 1.50<italic>E</italic>-03</td>
<td valign="top" align="left"><italic>t</italic> = -3.084, <italic>p</italic> = 5.40<italic>E</italic>-03</td>
</tr>
<tr>
<td valign="top" align="left">SFG &#x2192; Amygdala</td>
<td valign="top" align="center">0.120 &#x00B1; 0.063, <italic>p</italic> = 7.48<italic>E</italic>-07</td>
<td valign="top" align="center">0.224 &#x00B1; 0.108, <italic>p</italic> = 1.60<italic>E</italic>-03</td>
<td valign="top" align="left"><italic>t</italic> = -2.953, <italic>p</italic> = 7.40<italic>E</italic>-03</td>
</tr>
<tr>
<td valign="top" align="left">MTG &#x2192; Amygdala</td>
<td valign="top" align="center">0.061 &#x00B1; 0.046, <italic>p</italic> = 5.14<italic>E</italic>-05</td>
<td valign="top" align="center">0.141 &#x00B1; 0.147, <italic>p</italic> = 4.36<italic>E</italic>-02</td>
<td valign="top" align="left"><italic>t</italic> = -2.094, <italic>p</italic> = 4.80<italic>E</italic>-02</td>
</tr>
<tr>
<td valign="top" align="left">Amygdala &#x2192; Insula</td>
<td valign="top" align="center">0.071 &#x00B1; 0.049, <italic>p</italic> = 2.50<italic>E</italic>-05</td>
<td valign="top" align="center">0.021 &#x00B1; 0.013, <italic>p</italic> = 6.60<italic>E</italic>-03</td>
<td valign="top" align="left"><italic>t</italic> = 2.589, <italic>p</italic> = 1.68<italic>E</italic>-02</td>
</tr>
<tr>
<td valign="top" align="left">MFG &#x2192; Putamen</td>
<td valign="top" align="center">0.039 &#x00B1; 0.023, <italic>p</italic> = 3.19<italic>E</italic>-06</td>
<td valign="top" align="center">0.083 &#x00B1; 0.055, <italic>p</italic> = 7.20<italic>E</italic>-03</td>
<td valign="top" align="left"><italic>t</italic> = -2.853, <italic>p</italic> = 9.30<italic>E</italic>-03</td>
</tr>
<tr>
<td valign="top" align="left">SFG &#x2192; Putamen</td>
<td valign="top" align="center">0.031 &#x00B1; 0.034, <italic>p</italic> = 1.80<italic>E</italic>-03</td>
<td valign="top" align="center">0.067 &#x00B1; 0.032, <italic>p</italic> = 1.50<italic>E</italic>-03</td>
<td valign="top" align="left"><italic>t</italic> = -2.320, <italic>p</italic> = 3.00<italic>E</italic>-02</td>
</tr>
<tr>
<td valign="top" align="left">MFG &#x2192; Thalamus</td>
<td valign="top" align="center">0.187 &#x00B1; 0.060, <italic>p</italic> = 7.51<italic>E</italic>-10</td>
<td valign="top" align="center">0.276 &#x00B1; 0.144, <italic>p</italic> = 2.30<italic>E</italic>-03</td>
<td valign="top" align="left"><italic>t</italic> = -2.173, <italic>p</italic> = 4.08<italic>E</italic>-02</td>
</tr>
<tr>
<td valign="top" align="left">Putamen &#x2192; PCC via Thalamus</td>
<td valign="top" align="center">0.017 &#x00B1; 0.028, <italic>p</italic> = 2.45<italic>E</italic>-02</td>
<td valign="top" align="center">0.066 &#x00B1; 0.086, <italic>p</italic> = 9.01<italic>E</italic>-02</td>
<td valign="top" align="left"><italic>t</italic> = -2.144, <italic>p</italic> = 4.33<italic>E</italic>-02</td>
</tr>
<tr>
<td valign="top" align="left">Putamen &#x2192; SFG via Thalamus</td>
<td valign="top" align="center">0.027 &#x00B1; 0.027, <italic>p</italic> = 8.97<italic>E</italic>-04</td>
<td valign="top" align="center">0.084 &#x00B1; 0.073, <italic>p</italic> = 2.35<italic>E</italic>-02</td>
<td valign="top" align="left"><italic>t</italic> = -2.807, <italic>p</italic> = 1.03<italic>E</italic>-02</td></tr>
</tbody></table>
<table-wrap-foot>
<attrib><italic>The data in each cell in the second and third columns represent the mean &#x00B1; std of the GCIs. We used two-sample <italic>t</italic>-test to compare the GCIs of GAD and HC, yielding the significance test statistics in the fourth column (<italic>p</italic> &#x003C; 0.05, uncorrected). Thalamus <italic>X</italic> &#x2192;<italic>Y</italic> represents the connectivity between <italic>X</italic> and <italic>Y</italic> via the thalamus.</italic></attrib>
</table-wrap-foot>
</table-wrap>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p>Brain circuit that involved in emotion dysregulation in GAD. The image shows the significant interregional causal connections as estimated by the Granger causality index (GCI) and the comparison of GCIs between the GAD and HC. Yellow lines represent causal influences from region <italic>X</italic> to the region <italic>Y</italic>. Green lines represent causal influence from region <italic>X</italic> to region <italic>Y</italic> via the thalamus. The arrowhead shows the direction of each causal influence. The <italic>t</italic>-score means the group difference in GCIs between GAD and HC. Only significant connections are shown. Abbreviations: AMYG, amygdala; INS, insula; PUT, putamen; THA, thalamus; PCC, posterior cingulate cortex; MFG, middle frontal gyrus; SFG, superior frontal gyrus; MTG, middle temporal gyrus.</p></caption>
<graphic xlink:href="fnhum-11-00626-g003.tif"/>
</fig>
</sec>
<sec><title>Machine Learning</title>
<p>We performed MLDA classifier with ICs and GCIs features, achieving a classification accuracy of 87.5%, with a sensitivity of 90.0% and a specificity of 85.0%. The weights of the features were shown in <bold>Figure <xref ref-type="fig" rid="F4">4</xref></bold>. It can be seen that the connectivity in MFG, MTG, and amygdala made the largest classification contributions. We also performed kernel SVM to classify the GAD and HC, yielding an average accuracy of 92.5% with the LOOCV method. As the linear discriminant analysis does not work well when features are not linearly separable, the kernel SVM performs better than MLDA classifier by projecting features into a higher dimensional space where mapping features exhibit linear patterns.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Feature weights in the classification.</p></caption>
<graphic xlink:href="fnhum-11-00626-g004.tif"/>
</fig>
</sec>
</sec>
<sec><title>Discussion</title>
<p>In the present study, we applied HPM-ICA and GC methods on resting-state fMRI data to investigate the intrinsic differences in functional and effective connectivity between GAD and HC. Machine learning was then used to assess if these brain features can serve as biomarkers for GAD. We found that GAD subjects showed stronger FC in the amygdala, insula, putamen, PCC, and thalamus, while weaker FC in the prefrontal cortex and MTG. GC influences were generally weaker in GAD than in controls in connections from the prefrontal cortex to amygdala and subcortical regions. The results indicated that abnormal functional and effective connectivity in emotion-related brain networks was related to the generic risk of GAD, which makes it a potential endophenotype for GAD.</p>
<p>The amygdala plays a primary role in the processing of emotional reactions in humans and other animals (<xref ref-type="bibr" rid="B10">Davis and Whalen, 2001</xref>; <xref ref-type="bibr" rid="B60">Tye et al., 2011</xref>; <xref ref-type="bibr" rid="B51">Qin et al., 2014</xref>; <xref ref-type="bibr" rid="B1">Adhikari et al., 2015</xref>). The amygdala is the core of the coordination of autonomic and fear response (<xref ref-type="bibr" rid="B54">Shin and Liberzon, 2010</xref>). When the threat from outside is perceived, the amygdala is activated and projects the information into the cortex or subcortical nuclei to control arousal and autonomic responses. The amygdala may integrate all the information and then respond to the threat to activate fear circuit, leading to faster breathing, heart rate, and high blood pressure (<xref ref-type="bibr" rid="B32">Linares et al., 2012</xref>). Therefore, the amygdala is essential for the pathophysiology of anxiety disorders. The hyperactivation of the amygdala is reported in most anxiety disorders (<xref ref-type="bibr" rid="B16">Etkin and Wager, 2007</xref>; <xref ref-type="bibr" rid="B32">Linares et al., 2012</xref>; <xref ref-type="bibr" rid="B27">Li Y. et al., 2016</xref>). Consistent with previous studies, we identified that GAD patients exhibit increased FC in amygdala compared with HC, indicating that the sensitivity of the amygdala may be involved in the development of anxiety disorders.</p>
<p>The insula is marked as an important component of salience network (<xref ref-type="bibr" rid="B39">Menon and Uddin, 2010</xref>; <xref ref-type="bibr" rid="B47">Paulus and Stein, 2010</xref>; <xref ref-type="bibr" rid="B6">Cauda et al., 2011</xref>; <xref ref-type="bibr" rid="B32">Linares et al., 2012</xref>; <xref ref-type="bibr" rid="B44">Nieuwenhuys, 2012</xref>; <xref ref-type="bibr" rid="B45">Pannekoek et al., 2013</xref>; <xref ref-type="bibr" rid="B48">Peterson et al., 2014</xref>). The salience network is responsible for monitoring the individual internal and external conflicts and errors, and transmitting them to the frontoparietal control network to solve the conflict or reduce errors. Our results showed increased FC in insula, as well as increased effective connectivity from amygdala to insula, in the GAD group compared with the HC group, consistent with previous resting state (<xref ref-type="bibr" rid="B52">Roy et al., 2013</xref>) and task-related studies (<xref ref-type="bibr" rid="B38">Mcclure et al., 2007</xref>). The increased brain connectivity of insula in GAD may lead to lower thresholds for individual adaptation to the environment. That is, it is easier for GAD than HC to regard the neutral or non-conflict stimulus as threatening stimulus, resulting in the abnormal activation of anxiety circuit.</p>
<p>The GAD patients exhibited decreased connectivity between the prefrontal cortex and amygdala, which replicates previous neuroimaging findings (<xref ref-type="bibr" rid="B41">Monk et al., 2008</xref>; <xref ref-type="bibr" rid="B15">Etkin et al., 2009</xref>; <xref ref-type="bibr" rid="B52">Roy et al., 2013</xref>; <xref ref-type="bibr" rid="B24">Hilbert et al., 2014</xref>; <xref ref-type="bibr" rid="B36">Makovac et al., 2016</xref>). The prefrontal cortex is responsible for the cognitive control. Reduced connectivity of the prefrontal cortex in GAD patients has been associated with the top-down emotional dysregulation and attention deficit, which may be closely related to anxiety symptoms and anxiety characteristics. The decreased modulation function of the prefrontal cortex to amygdala may result in the abnormal continuous activation of the fear loop. Therefore, the cognitive impairment in GAD patients may lead to the clinical symptoms such as persistent anxiety and worry.</p>
<p>We also found decreased connectivity between the MTG and the amygdala in GAD patients compared with HC. Evidence has shown that the medial temporal lobe and its interactions with the amygdala are critically implicated in enhancing memory for intrinsically threatening stimuli (<xref ref-type="bibr" rid="B25">Labar and Cabeza, 2006</xref>). Moreover, emotionally arousing stimuli exert their beneficial effect on episodic memory by enhancing activity in both the amygdala and the medial temporal lobe memory system in the human brain (<xref ref-type="bibr" rid="B14">Dolcos et al., 2004</xref>). In addition, changes in heart rate variability over time were reported as positively correlated with the FC between amygdala and MTG in GAD (<xref ref-type="bibr" rid="B36">Makovac et al., 2016</xref>). Taken together, impairments in connectivity in the MTG-associated memory retrieval and attention brain network may be related to the difficult extinction of fear conditioning, leading to the continuous worry, anxiety, and apprehension for GAD patients.</p>
<p>We found robust and reproducible increased connectivity in thalamus in patients with GAD, which is the central core in cortical&#x2013;subcortical neurocircuitry. The thalamus is an important relay station for sensory information transmission and has widely spread functional connections with cortical and subcortical areas in the brain. Previous neuroimaging studies have suggested that the thalamus plays an important role not only in the filtering of sensory information, but also involved in the process of senior cognition and emotion regulation (<xref ref-type="bibr" rid="B23">Herrero et al., 2002</xref>; <xref ref-type="bibr" rid="B2">Boatman and Kim, 2006</xref>; <xref ref-type="bibr" rid="B20">Haber and Calzavara, 2009</xref>). Previous findings indicate elevated activity in the thalamus in GAD patients relative to HC during directed threat imagery (<xref ref-type="bibr" rid="B4">Buff et al., 2017</xref>). Furthermore, increased connectivity between amygdala and thalamus was predicted by the amplified physiological responses to the induction (<xref ref-type="bibr" rid="B36">Makovac et al., 2016</xref>). Thus, abnormal connectivity of the thalamus may cause sensory information filtering disorder and excessive alertness in GAD patients.</p>
<p>The putamen showed the expected pattern of increased FC in GAD patients compared with HC. Previous studies have observed increased amygdala FC with the putamen (<xref ref-type="bibr" rid="B35">Liu et al., 2015c</xref>) and significantly larger gray matter volume of the putamen in GAD patients compared to HC (<xref ref-type="bibr" rid="B28">Liao et al., 2013</xref>). Adolescents with GAD showed putamen hyperactivation in response to valence decisions (<xref ref-type="bibr" rid="B19">Guyer et al., 2012</xref>). The main function of the putamen is to regulate movements and influence various types of learning. Alterations in the putamen might be associated with somatic anxiety symptoms of GAD.</p>
<p>Additionally, we found increased connectivity in PCC which is the central core of the default mode network (DMN). The DMN is most commonly shown to be active during passive rest and mind-wandering (<xref ref-type="bibr" rid="B3">Buckner et al., 2008</xref>). A previous fMRI study identified the increased FC within DMN associated with both anxiety and depression and the connectivity was positively correlated with anxiety and depression scores (<xref ref-type="bibr" rid="B8">Coutinho et al., 2016</xref>). Several studies have shown that intrinsic activity within PCC is altered and associated with worry in anxiety disorders (<xref ref-type="bibr" rid="B46">Paulesu et al., 2010</xref>; <xref ref-type="bibr" rid="B59">Sylvester et al., 2012</xref>; <xref ref-type="bibr" rid="B36">Makovac et al., 2016</xref>). Increased connectivity in PCC within the DMN in GAD patients indicated the enhancement of the processing and collection of the surrounding information which may be responsible for the tension and worry of GAD even in the resting state.</p>
<p>Lastly, high classification accuracy with features of altered connectivity in amygdala, insula, prefrontal cortex, temporal cortex, thalamus, and putamen could across verify that pathological change of these regions may be the neural substrates underlying the occurrence of GAD. To our knowledge, this is the first study to show that GAD can be accurately classified from HC based on functional resting-state biomarkers. In addition, the future work will focus on how to improve the classification performance by larger sample size and incorporating information from different imaging modalities.</p>
<p>The current study has several limitations. First, the <italic>t</italic>-test-based feature selection method was used in this study which does not take into account interactions between multiple features and spatial patterns. However, applications of <italic>t</italic>-tests in feature selection are computationally fast and easy to implement and scale well to high dimensional data. Therefore, they are able to select a small subset of relevant features from the original high-dimensional feature set. Second, we used data-driven-based analysis in this study which may lead to an incomplete biomarker set of GAD. Further study is needed to combine the ROI-based analysis and multivariate feature selection methods to find more complete and robust biomarkers of GAD.</p>
</sec>
<sec><title>Ethics Statement</title>
<p>This study was carried out in accordance with the recommendations of DSM-IV, the Institutional Review Board of Qilu Hospital of Shandong University with written informed consent from all subjects. All subjects gave written informed consent in accordance with the Declaration of Helsinki. The protocol was approved by the Institutional Review Board of Qilu Hospital of Shandong University.</p>
</sec>
<sec><title>Author Contributions</title>
<p>Conceived and designed the experiments: JQ, AL, and GX. Performed the experiments: JQ, AL, and GX. Analyzed the data: JQ, ZW, and JS. Contributed reagents/materials/analysis tools: JQ and ZW. Wrote the paper: JQ, ZW, CC, and GX.</p>
</sec>
<sec><title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> This work was supported by the National Natural Science Foundation of China (61603225), Natural Science Foundation of Shandong Province (ZR2016FQ04), China Postdoctoral Science Foundation (2016M602182), Key Research and Development Foundation of Shandong Province (2016GGX101009), Natural Science Foundation of Shandong Province (ZR2014FM012), Shandong Provincial Key Research and Development Plan (2017CXGC1504), and Natural Science Foundation for Distinguished Young Scholars of Shandong Province (JQ201718).</p>
</fn>
</fn-group>
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