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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Genet.</journal-id>
<journal-title>Frontiers in Genetics</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Genet.</abbrev-journal-title>
<issn pub-type="epub">1664-8021</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">1502921</article-id>
<article-id pub-id-type="doi">10.3389/fgene.2025.1502921</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Genetics</subject>
<subj-group>
<subject>Systematic Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Comprehensive systematic review and meta-analysis of the TGF-&#x3b2;1 T869C gene polymorphism and autoimmune disease susceptibility</article-title>
<alt-title alt-title-type="left-running-head">Zhu et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fgene.2025.1502921">10.3389/fgene.2025.1502921</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zhu</surname>
<given-names>Yawen</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/2837719/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/investigation/"/>
<role content-type="https://credit.niso.org/contributor-roles/project-administration/"/>
<role content-type="https://credit.niso.org/contributor-roles/software/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Qian</surname>
<given-names>Ai</given-names>
</name>
<role content-type="https://credit.niso.org/contributor-roles/investigation/"/>
<role content-type="https://credit.niso.org/contributor-roles/software/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Cheng</surname>
<given-names>Yuanyuan</given-names>
</name>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/investigation/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Ming</given-names>
</name>
<role content-type="https://credit.niso.org/contributor-roles/data-curation/"/>
<role content-type="https://credit.niso.org/contributor-roles/methodology/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Huang</surname>
<given-names>Chuanbing</given-names>
</name>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1663947/overview"/>
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<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
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</contrib-group>
<aff>
<institution>The First Affiliated Hospital of Anhui University of Chinese Medicine</institution>, <addr-line>Hefei</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/498350/overview">Jordi P&#xe9;rez-Tur</ext-link>, Spanish National Research Council (CSIC), Spain</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/509227/overview">Sailu Yellaboina</ext-link>, CR Rao Advanced Institute of Mathematics, Statistics and Computer Science, India</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2046757/overview">Ashwin Kotnis</ext-link>, All India Institute of Medical Sciences, Bhopal, India</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Chuanbing Huang, <email>chuanbinh@163.com</email>
</corresp>
</author-notes>
<pub-date pub-type="epub">
<day>20</day>
<month>02</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>16</volume>
<elocation-id>1502921</elocation-id>
<history>
<date date-type="received">
<day>27</day>
<month>09</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>07</day>
<month>01</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Zhu, Qian, Cheng, Li and Huang.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Zhu, Qian, Cheng, Li and Huang</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<sec>
<title>Objective</title>
<p>Autoimmune diseases (ADs) result from an aberrant immune response, in which the body mistakenly targets its own tissues. The association between TGF-&#x3b2;1 gene polymorphisms and risk of developing autoimmune diseases remains to be established. This meta-analysis aimed to reassess the relationship between TGF-&#x3b2;1 T869C gene polymorphisms and susceptibility to autoimmune diseases.</p>
</sec>
<sec>
<title>Methods</title>
<p>We conducted a comprehensive search of seven electronic databases for case-control studies investigating the TGF-&#x3b2;1 T869C polymorphism in relation to autoimmune diseases, including rheumatoid arthritis, systemic lupus erythematosus, systemic sclerosis, Sj&#xf6;gren&#x2019;s syndrome, and juvenile idiopathic arthritis. The search encompassed publications published up to June 2024. Studies were categorized by ethnicity into three groups: Asian, Caucasian, and mixed-ethnicity groups. Five different genetic models were assessed, and the quality of the included studies was evaluated using the Newcastle-Ottawa Scale (NOS). Statistical analyses were performed using Stata 14.0, by calculating the odds ratio (OR) and 95% confidence interval (CI).</p>
</sec>
<sec>
<title>Results</title>
<p>A total of 32 case-control studies (31 articles), comprising 4,304 cases and 4,664 controls, were included in this meta-analysis. The overall analysis indicated no significant association between TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to autoimmune diseases. However, subgroup analyses based on race and disease status revealed significant associations. Ethnic subgroup analysis showed that the TGF-&#x3b2;1 T869C allele model (T vs C: OR &#x3d; 1.422, 95% CI &#x3d; 1.109&#x2013;1.824, P &#x3d; 0.006), homozygous model (TT vs CC: OR &#x3d; 1.923, 95% CI &#x3d; 1.232&#x2013;3.004, P &#x3d; 0.004), and dominant model (TT &#x2b; TC vs CC: OR &#x3d; 1.599, 95% CI &#x3d; 1.164&#x2013;2.196, P &#x3d; 0.004) were associated with autoimmune disease susceptibility in Asians. In the disease subgroup analysis, the results showed that the TGF-&#x3b2;1 T869C allele model (T vs C: OR &#x3d; 1.468, 95% CI &#x3d; 1.210&#x2013;1.781, P &#x3d; 0.000), recessive model (TT vs TC &#x2b; CC: OR &#x3d; 1.418, 95% CI &#x3d; 1.097&#x2013;1.832, P &#x3d; 0.008), dominant model (TT &#x2b; TC vs CC: OR &#x3d; 1.747, 95% CI &#x3d; 1.330&#x2013;2.295, P &#x3d; 0.000), homozygous model (TT vs CC: OR &#x3d; 1.937, 95% CI &#x3d; 1.373&#x2013;2.734, P &#x3d; 0.000), and heterozygous model (TC vs CC: OR &#x3d; 1.555, 95% CI &#x3d; 1.199&#x2013;2.016, P &#x3d; 0.001) were associated with rheumatoid arthritis susceptibility.</p>
</sec>
<sec>
<title>Conclusion</title>
<p>The findings of this meta-analysis suggest that carrying the T allele of the TGF-&#x3b2;1 T869C polymorphism increases the risk of autoimmune diseases in Asian populations. Moreover, individuals carrying the T allele are at higher risk of developing rheumatoid arthritis.</p>
</sec>
</abstract>
<kwd-group>
<kwd>autoimmune disease</kwd>
<kwd>meta-analysis</kwd>
<kwd>polymorphism</kwd>
<kwd>transforming growth factor-&#x3b2;1</kwd>
<kwd>susceptibility</kwd>
</kwd-group>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Genetics of Common and Rare Diseases</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Autoimmune diseases (ADs) are a class of conditions characterized by immune system dysfunction leading to tissue and organ damage (<xref ref-type="bibr" rid="B32">Rose, 2016</xref>). These diseases are broadly categorized into organ-specific autoimmune diseases and systemic autoimmune diseases. Systemic autoimmune diseases such as rheumatoid arthritis, systemic lupus erythematosus, Sj&#xf6;gren&#x2019;s syndrome, and systemic sclerosis are widespread and pose significant health risks (<xref ref-type="bibr" rid="B41">Vargas-Uricoechea, 2023</xref>). Autoimmune diseases affect approximately 10% of the global population and their prevalence is increasing (<xref ref-type="bibr" rid="B5">Cao et al., 2023</xref>).</p>
<p>The etiology of ADs is primarily attributed to a combination of genetic predispositions and environmental factors. Among the various factors involved in the pathogenesis of autoimmune diseases, cytokines have garnered considerable attention. Transforming growth factor &#x3b2;1 (TGF-&#x3b2;1) is a key cytokine predominantly expressed by immune cells such as lymphocytes, macrophages, and dendritic cells (<xref ref-type="bibr" rid="B2">Aoki et al., 2005</xref>). It has been reported that the TGF-&#x3b2;1 T869C (rs1982073) gene polymorphism is a potential risk factor for various autoimmune diseases, including rheumatoid arthritis, systemic lupus erythematosus, and systemic sclerosis (<xref ref-type="bibr" rid="B11">Hussein et al., 2014</xref>; <xref ref-type="bibr" rid="B7">G&#xf3;mez-Bernal et al., 2022</xref>; <xref ref-type="bibr" rid="B44">Xie et al., 2022</xref>; <xref ref-type="bibr" rid="B47">Zhang et al., 2020</xref>). However, due to discrepancies in experimental data, some studies have found no significant association between TGF-&#x3b2;1 and ADs.</p>
<p>Before 2023, numerous meta-analyses investigated the association between the TGF-&#x3b2;1 promoter T869C polymorphism and the risk of autoimmune diseases. However, these studies frequently faced limitations, including small sample sizes, extended time gaps between analyses, and narrow focus on one or two autoimmune conditions. To address these challenges, the current study sought to include a broader range of autoimmune diseases and incorporate the latest literature, offering a more comprehensive evaluation of the potential connection between the TGF-&#x3b2;1 promoter T869C polymorphism and susceptibility to autoimmune disorders.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>2 Materials and methods</title>
<sec id="s2-1">
<title>2.1 Literature inclusion criteria</title>
<p>The studies included in this analysis were selected based on the following criteria: (i) Study Design: Only case-control studies were considered; (ii) Focus: Studies that evaluated the association between the TGF-&#x3b2;1 T869C polymorphism and susceptibility to autoimmune diseases, specifically rheumatoid arthritis, systemic lupus erythematosus, or systemic sclerosis; (iii) Data Requirements: Studies must provide the genotype frequency distribution for both case and control groups; (iv) Quality Control: The genotype distribution in the control group must adhere to Hardy-Weinberg Equilibrium (HWE).</p>
</sec>
<sec id="s2-2">
<title>2.2 Literature exclusion criteria</title>
<p>The following publications were excluded: case reports, review papers, conference abstracts, and similar non-original research articles.</p>
</sec>
<sec id="s2-3">
<title>2.3 Literature retrieval method</title>
<p>The meta-analysis followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. A comprehensive search was conducted to identify case-control studies that examined the association between TGF-&#x3b2;1 and autoimmune diseases, including rheumatoid arthritis, systemic lupus erythematosus, systemic sclerosis, Sj&#xf6;gren&#x2019;s syndrome, and juvenile idiopathic arthritis. The databases searched included PubMed, CNKI, VIP Database, Embase, Web of Science, Wanfang Database, and SCOPUS, covering publications from the inception of each database through June 2024.</p>
<p>For example, the search strategy in PubMed used the following terms: ((((((((Transforming Growth Factor &#x3b2;1 [MeSH Terms]) OR (TGF &#x3b2;1 [Title/Abstract])) OR (TGF-&#x3b2;1 [Title/Abstract])) OR (transforming growth factor beta1 [Title/Abstract])))) AND (((((((((systemic sclerosis [MeSH Terms]) OR (scleroderma [Title/Abstract])) OR (SSC [Title/Abstract]))) OR (((rheumatoid arthritis [MeSH Terms]) OR (RA [Title/Abstract])))) OR (((systemic lupus erythematosus [MeSH Terms]) OR (SLE [Title/Abstract])))) OR (((Juvenile idiopathic arthritis [MeSH Terms]) OR (JIA [Title/Abstract])))) OR (((Sj&#xf6;gren syndrome [MeSH Terms]) OR (SS [Title/Abstract])))))) AND ((((((((single nucleotide [Title/Abstract])) OR (SNP [Title/Abstract])) OR (polymorphism [Title/Abstract])) OR (mutation [Title/Abstract])) OR (variation [Title/Abstract])) OR (variant [Title/Abstract])) OR (polymorphisms [Title/Abstract]))).</p>
</sec>
<sec id="s2-4">
<title>2.4 Literature extraction and quality assessment</title>
<p>Two researchers, Zhu Yawen and Cheng Yuanyuan, independently extracted relevant data from the articles based on the inclusion and exclusion criteria. The extracted information included the first author, year of publication, type of disease, ethnicity, and number of participants in both the case and control groups. In cases of disagreement between the two researchers, a third researcher, Qian Ai, was consulted to make a final decision. The quality of the included studies was assessed using the Newcastle-Ottawa Scale (NOS), which scores studies from 0 to 9 points. Studies with a score greater than six were considered of high quality (<xref ref-type="bibr" rid="B24">Mirzakhani et al., 2020</xref>).</p>
</sec>
<sec id="s2-5">
<title>2.5 Statistical analysis</title>
<p>Statistical analyses were performed using STATA 14.0 to assess the association between the TGF-&#x3b2;1 T869C gene polymorphism and autoimmune diseases. The effect size was expressed as odds ratios (OR) with 95% confidence intervals (CI). The analysis focused on five autoimmune diseases: rheumatoid arthritis, systemic lupus erythematosus, systemic sclerosis, Sj&#xf6;gren&#x2019;s syndrome, and juvenile idiopathic arthritis.</p>
<p>The chi-square test was used to evaluate Hardy-Weinberg Equilibrium (HWE) in each control group. If heterogeneity among studies was indicated by a p-value of less than 0.05, a random-effects model was applied; otherwise, a fixed-effects model was used. The analysis included various genetic models: recessive (TT vs. TC &#x2b; CC), dominant (TT &#x2b; TC vs. CC), allele (T vs. C), homozygous (TT vs. CC), and heterozygous (TC vs. CC). Subgroup analysis was conducted when the number of studies was allowed. Publication bias was assessed using the Begg&#x2019;s and Egger&#x2019;s tests.</p>
</sec>
</sec>
<sec id="s3">
<title>3 Research results</title>
<sec id="s3-1">
<title>3.1 Literature retrieval</title>
<p>A preliminary search identified 326 published papers (<xref ref-type="fig" rid="F1">Figure 1</xref>). After removing duplicates, 108 papers remained for the next screening phase. Based on a review of the titles and abstracts, 37 articles met the inclusion criteria and were selected for further analysis. After conducting Hardy-Weinberg Equilibrium (HWE) analysis, 31 articles (32 studies) were included in this meta-analysis, comprising 4,304 patients with autoimmune diseases and 4,664 healthy controls (<xref ref-type="table" rid="T1">Table 1</xref>). The studies included 14 focused on Asian populations, 13 on Caucasian populations, and 5 on mixed ethnic groups. The disease-specific studies included 7 studies on systemic sclerosis, 6 on systemic lupus erythematosus, 17 on rheumatoid arthritis, and one each on Sj&#xf6;gren&#x2019;s syndrome and juvenile idiopathic arthritis.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Schematic diagram of the literature screening process.</p>
</caption>
<graphic xlink:href="fgene-16-1502921-g001.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Basic information on included studies.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="center">Number</th>
<th align="center">Author</th>
<th align="center">Year</th>
<th align="center">Country</th>
<th align="center">Racial</th>
<th align="center">Disease number</th>
<th align="center">Control number</th>
<th align="center">Disease</th>
<th align="center">Nos</th>
<th align="center">Hwe</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="center">No. 1</td>
<td align="center">
<xref ref-type="bibr" rid="B21">Lomeli-Nieto et al. (2022)</xref>
</td>
<td align="center">2022</td>
<td align="center">Mexico</td>
<td align="center">Mixed</td>
<td align="center">56</td>
<td align="center">120</td>
<td align="center">SSC</td>
<td align="center">7</td>
<td align="center">0.976</td>
</tr>
<tr>
<td align="center">No. 2</td>
<td align="center">
<xref ref-type="bibr" rid="B4">B&#xfc;y&#xfc;k et al. (2010)</xref>
</td>
<td align="center">2010</td>
<td align="center">Turkey</td>
<td align="center">Caucasian</td>
<td align="center">43</td>
<td align="center">75</td>
<td align="center">SSC</td>
<td align="center">8</td>
<td align="center">0.224</td>
</tr>
<tr>
<td align="center">No. 3</td>
<td align="center">
<xref ref-type="bibr" rid="B37">Sugiura et al. (2003)</xref>
</td>
<td align="center">2003</td>
<td align="center">Japan</td>
<td align="center">Asia</td>
<td align="center">87</td>
<td align="center">110</td>
<td align="center">SSC</td>
<td align="center">8</td>
<td align="center">0.952</td>
</tr>
<tr>
<td align="center">No. 4</td>
<td align="center">
<xref ref-type="bibr" rid="B17">Lee et al. (2004)</xref>
</td>
<td align="center">2003</td>
<td align="center">South Korea</td>
<td align="center">Asia</td>
<td align="center">61</td>
<td align="center">148</td>
<td align="center">SSC</td>
<td align="center">8</td>
<td align="center">0.886</td>
</tr>
<tr>
<td align="center">No. 5</td>
<td align="center">
<xref ref-type="bibr" rid="B48">Zhou et al. (2000)</xref>
</td>
<td align="center">2000</td>
<td align="center">America</td>
<td align="center">Mixed</td>
<td align="center">19</td>
<td align="center">76</td>
<td align="center">SSC</td>
<td align="center">8</td>
<td align="center">1</td>
</tr>
<tr>
<td align="center">No. 6</td>
<td align="center">
<xref ref-type="bibr" rid="B3">Beretta et al. (2008)</xref>
</td>
<td align="center">2008</td>
<td align="center">Italy</td>
<td align="center">Caucasian</td>
<td align="center">242</td>
<td align="center">242</td>
<td align="center">SSC</td>
<td align="center">8</td>
<td align="center">1</td>
</tr>
<tr>
<td align="center">No. 7</td>
<td align="center">
<xref ref-type="bibr" rid="B26">Ohtsuka et al. (2002)</xref>
</td>
<td align="center">2002</td>
<td align="center">Japan</td>
<td align="center">Asia</td>
<td align="center">59</td>
<td align="center">110</td>
<td align="center">SSC</td>
<td align="center">8</td>
<td align="center">0.93</td>
</tr>
<tr>
<td align="center">No. 8</td>
<td align="center">
<xref ref-type="bibr" rid="B28">Paradowska-Gorycka et al. (2019)</xref>
</td>
<td align="center">2019</td>
<td align="center">Polish</td>
<td align="center">Caucasian</td>
<td align="center">216</td>
<td align="center">552</td>
<td align="center">SLE</td>
<td align="center">8</td>
<td align="center">0.68</td>
</tr>
<tr>
<td align="center">No. 9</td>
<td align="center">
<xref ref-type="bibr" rid="B42">Wang B. et al. (2007)</xref>
</td>
<td align="center">2007</td>
<td align="center">Japan</td>
<td align="center">Asia</td>
<td align="center">196</td>
<td align="center">106</td>
<td align="center">SLE</td>
<td align="center">8</td>
<td align="center">0.536</td>
</tr>
<tr>
<td align="center">No. 10</td>
<td align="center">
<xref ref-type="bibr" rid="B34">Sayed et al. (2014)</xref>
</td>
<td align="center">2014</td>
<td align="center">Egypt</td>
<td align="center">Caucasian</td>
<td align="center">56</td>
<td align="center">40</td>
<td align="center">SLE</td>
<td align="center">7</td>
<td align="center">0.998</td>
</tr>
<tr>
<td align="center">No. 11</td>
<td align="center">
<xref ref-type="bibr" rid="B36">Stadtlober et al. (2021)</xref>
</td>
<td align="center">2021</td>
<td align="center">Brazil</td>
<td align="center">Mixed</td>
<td align="center">203</td>
<td align="center">165</td>
<td align="center">SLE</td>
<td align="center">9</td>
<td align="center">0.315</td>
</tr>
<tr>
<td align="center">No. 12</td>
<td align="center">
<xref ref-type="bibr" rid="B22">Lu et al. (2004)</xref>
</td>
<td align="center">2004</td>
<td align="center">China</td>
<td align="center">Asia</td>
<td align="center">138</td>
<td align="center">182</td>
<td align="center">SLE</td>
<td align="center">7</td>
<td align="center">0.574</td>
</tr>
<tr>
<td align="center">No. 13</td>
<td align="center">
<xref ref-type="bibr" rid="B9">Guarnizo-Zuccardi et al. (2007)</xref>
</td>
<td align="center">2007</td>
<td align="center">Columbia</td>
<td align="center">Mixed</td>
<td align="center">120</td>
<td align="center">102</td>
<td align="center">SLE</td>
<td align="center">7</td>
<td align="center">0.15</td>
</tr>
<tr>
<td align="center">No. 14</td>
<td align="center">
<xref ref-type="bibr" rid="B1">Alayli et al. (2009)</xref>
</td>
<td align="center">2009</td>
<td align="center">Turkey</td>
<td align="center">Caucasian</td>
<td align="center">131</td>
<td align="center">133</td>
<td align="center">RA</td>
<td align="center">9</td>
<td align="center">0.999</td>
</tr>
<tr>
<td align="center">No. 15</td>
<td align="center">
<xref ref-type="bibr" rid="B11">Hussein et al. (2014)</xref>
</td>
<td align="center">2014</td>
<td align="center">Egypt</td>
<td align="center">Caucasian</td>
<td align="center">160</td>
<td align="center">168</td>
<td align="center">RA</td>
<td align="center">7</td>
<td align="center">0.358</td>
</tr>
<tr>
<td align="center">No. 16</td>
<td align="center">
<xref ref-type="bibr" rid="B13">Kim et al. (2004)</xref>
</td>
<td align="center">2004</td>
<td align="center">South Korea</td>
<td align="center">Asia</td>
<td align="center">143</td>
<td align="center">148</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.337</td>
</tr>
<tr>
<td align="center">No. 17</td>
<td align="center">
<xref ref-type="bibr" rid="B27">Panoulas et al. (2009)</xref>
</td>
<td align="center">2009</td>
<td align="center">England</td>
<td align="center">Caucasian</td>
<td align="center">395</td>
<td align="center">401</td>
<td align="center">RA</td>
<td align="center">9</td>
<td align="center">1</td>
</tr>
<tr>
<td align="center">No. 18</td>
<td align="center">
<xref ref-type="bibr" rid="B29">Patel et al. (2020)</xref>
</td>
<td align="center">2020</td>
<td align="center">North India</td>
<td align="center">Asia</td>
<td align="center">76</td>
<td align="center">87</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.984</td>
</tr>
<tr>
<td align="center">No. 19</td>
<td align="center">
<xref ref-type="bibr" rid="B30">Pokorny et al. (2003)</xref>
</td>
<td align="center">2003</td>
<td align="center">New Zeeland</td>
<td align="center">Caucasian</td>
<td align="center">117</td>
<td align="center">140</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.809</td>
</tr>
<tr>
<td align="center">No. 20</td>
<td align="center">
<xref ref-type="bibr" rid="B33">Saad et al. (2015)</xref>
</td>
<td align="center">2015</td>
<td align="center">Egypt</td>
<td align="center">Caucasian</td>
<td align="center">105</td>
<td align="center">80</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.246</td>
</tr>
<tr>
<td align="center">No. 21</td>
<td align="center">
<xref ref-type="bibr" rid="B35">Shaker et al. (2016)</xref>
</td>
<td align="center">2016</td>
<td align="center">Egypt</td>
<td align="center">Caucasian</td>
<td align="center">104</td>
<td align="center">90</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.232</td>
</tr>
<tr>
<td align="center">No. 22</td>
<td align="center">
<xref ref-type="bibr" rid="B38">Sugiura et al. (2002)</xref>
</td>
<td align="center">2002</td>
<td align="center">Japan</td>
<td align="center">Asia</td>
<td align="center">155</td>
<td align="center">110</td>
<td align="center">RA</td>
<td align="center">9</td>
<td align="center">0.952</td>
</tr>
<tr>
<td align="center">No. 23</td>
<td align="center">
<xref ref-type="bibr" rid="B39">Sun et al. (2019)</xref>
</td>
<td align="center">2019</td>
<td align="center">China</td>
<td align="center">Asia</td>
<td align="center">150</td>
<td align="center">150</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.81</td>
</tr>
<tr>
<td align="center">No. 24</td>
<td align="center">
<xref ref-type="bibr" rid="B10">Hassan et al. (2022)</xref>
</td>
<td align="center">2022</td>
<td align="center">Egypt</td>
<td align="center">Caucasian</td>
<td align="center">30</td>
<td align="center">30</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.47</td>
</tr>
<tr>
<td align="center">No. 25</td>
<td align="center">
<xref ref-type="bibr" rid="B43">Wang Y. P. et al. (2007)</xref>
</td>
<td align="center">2007</td>
<td align="center">China</td>
<td align="center">Asia</td>
<td align="center">105</td>
<td align="center">110</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.827</td>
</tr>
<tr>
<td align="center">No. 26</td>
<td align="center">
<xref ref-type="bibr" rid="B20">Li (2011)</xref>
</td>
<td align="center">2011</td>
<td align="center">China</td>
<td align="center">Asia</td>
<td align="center">112</td>
<td align="center">201</td>
<td align="center">RA</td>
<td align="center">9</td>
<td align="center">0.817</td>
</tr>
<tr>
<td align="center">No. 27</td>
<td align="center">
<xref ref-type="bibr" rid="B50">Zhu et al. (2006)</xref>
</td>
<td align="center">2006</td>
<td align="center">China</td>
<td align="center">Asia</td>
<td align="center">76</td>
<td align="center">100</td>
<td align="center">RA</td>
<td align="center">9</td>
<td align="center">0.908</td>
</tr>
<tr>
<td align="center">No. 28</td>
<td align="center">
<xref ref-type="bibr" rid="B12">Iriyoda et al. (2020)</xref>
</td>
<td align="center">2020</td>
<td align="center">Brazil</td>
<td align="center">Mixed</td>
<td align="center">262</td>
<td align="center">168</td>
<td align="center">RA</td>
<td align="center">9</td>
<td align="center">0.694</td>
</tr>
<tr>
<td align="center">No. 29</td>
<td align="center">
<xref ref-type="bibr" rid="B14">Kobayashi et al. (2009)</xref>
</td>
<td align="center">2015</td>
<td align="center">Japan</td>
<td align="center">Asia</td>
<td align="center">137</td>
<td align="center">117</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.811</td>
</tr>
<tr>
<td align="center">No. 30</td>
<td align="center">
<xref ref-type="bibr" rid="B14">Kobayashi et al. (2009)</xref>
</td>
<td align="center">2015</td>
<td align="center">Japan</td>
<td align="center">Asia</td>
<td align="center">137</td>
<td align="center">108</td>
<td align="center">RA</td>
<td align="center">8</td>
<td align="center">0.846</td>
</tr>
<tr>
<td align="center">No. 31</td>
<td align="center">
<xref ref-type="bibr" rid="B8">Gottenberg et al. (2004)</xref>
</td>
<td align="center">2004</td>
<td align="center">French</td>
<td align="center">Caucasian</td>
<td align="center">128</td>
<td align="center">88</td>
<td align="center">SS</td>
<td align="center">8</td>
<td align="center">0.47</td>
</tr>
<tr>
<td align="center">No. 32</td>
<td align="center">
<xref ref-type="bibr" rid="B25">Oen et al. (2005)</xref>
</td>
<td align="center">2005</td>
<td align="center">Canada</td>
<td align="center">Caucasian</td>
<td align="center">149</td>
<td align="center">92</td>
<td align="center">JIA</td>
<td align="center">7</td>
<td align="center">0.43</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s3-2">
<title>3.2 Meta-analysis of TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to autoimmune diseases</title>
<p>
<xref ref-type="table" rid="T2">Table 2</xref> presents a summary of the meta-analysis findings regarding the potential association between TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to autoimmune diseases. Because of the heterogeneity observed across all five genetic models, a random effects model was used for the analysis. The findings show no significant association between the TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to autoimmune diseases (T vs. C: OR &#x3d; 1.163, 95% CI &#x3d; 1.010-1.339, P &#x3d; 0.036; TT vs. CC: OR &#x3d; 1.398, 95% CI &#x3d; 1.074-1.820, P &#x3d; 0.013; TT vs. TC &#x2b; CC: OR &#x3d; 1.156, 95% CI &#x3d; 0.966-1.382, P &#x3d; 0.113; TT &#x2b; TC vs. CC: OR &#x3d; 1.219, 95% CI &#x3d; 0.998-1.504, P &#x3d; 0.065; TC vs CC: OR &#x3d; 1.151, 95% CI &#x3d; 0.950-1.395, P &#x3d; 0.151).</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Meta-analysis results of TGF-&#x3b2;1 T869C and autoimmune diseases.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th rowspan="2" align="center">rs1982073</th>
<th rowspan="2" align="center">Comparison</th>
<th rowspan="2" align="center">No.of studies</th>
<th colspan="3" align="center">Test of association</th>
<th rowspan="2" align="center">Model</th>
<th colspan="3" align="center">Test of heterogeneity</th>
<th colspan="2" align="center">Publication bias</th>
</tr>
<tr>
<th align="center">OR</th>
<th align="center">95% CI</th>
<th align="center">P Value</th>
<th align="center">Q</th>
<th align="center">P Value</th>
<th align="center">I2 (%)</th>
<th align="center">P begg</th>
<th align="center">P egger</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td rowspan="5" align="center">Overall</td>
<td align="center">TT versus CC CT</td>
<td align="center">32</td>
<td align="center">1.156</td>
<td align="center">0.966&#x2013;1.382</td>
<td align="center">0.113</td>
<td align="center">R</td>
<td align="center">93.32</td>
<td align="center">0.000</td>
<td align="center">66.8</td>
<td align="center">0.593</td>
<td align="center">0.265</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">32</td>
<td align="center">1.219</td>
<td align="center">0.988&#x2013;1.504</td>
<td align="center">0.065</td>
<td align="center">R</td>
<td align="center">112.37</td>
<td align="center">0.000</td>
<td align="center">72.4</td>
<td align="center">0.808</td>
<td align="center">0.464</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">32</td>
<td align="center">1.163</td>
<td align="center">1.010&#x2013;1.339</td>
<td align="center">0.036</td>
<td align="center">R</td>
<td align="center">149.82</td>
<td align="center">0.000</td>
<td align="center">79.3</td>
<td align="center">0.277</td>
<td align="center">0.187</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">32</td>
<td align="center">1.398</td>
<td align="center">1.074&#x2013;1.820</td>
<td align="center">0.013</td>
<td align="center">R</td>
<td align="center">123.41</td>
<td align="center">0.000</td>
<td align="center">74.9</td>
<td align="center">0.178</td>
<td align="center">0.214</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">32</td>
<td align="center">1.151</td>
<td align="center">0.950&#x2013;1.395</td>
<td align="center">0.151</td>
<td align="center">R</td>
<td align="center">82.81</td>
<td align="center">0.000</td>
<td align="center">62.6</td>
<td align="center">0.987</td>
<td align="center">0.767</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s3-3">
<title>3.3 Racial asian meta-analysis of TGF-&#x3b2;1 T869C gene polymorphism</title>
<p>To gain a deeper understanding of the relationship between TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to autoimmune diseases, an ethnic subgroup analysis was conducted. Quantitative analysis of 32 eligible studies identified three distinct ethnic groups: Asians (14 studies), Caucasians (13 studies), and mixed ethnic groups (5 studies). Racial analysis indicated a significant association between TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to autoimmune diseases in the Asian population (<xref ref-type="table" rid="T3">Table 3</xref>). The results for the Asian subgroup are as follows: TT vs. TC &#x2b; CC: OR &#x3d; 1.540, 95% CI &#x3d; 1.099&#x2013;2.157, P &#x3d; 0.012 &#x3c; 0.01; TT &#x2b; TC vs. CC: OR &#x3d; 1.599, 95% CI &#x3d; 1.164&#x2013;2.196, P &#x3d; 0.004 &#x3c; 0.01; T vs. C: OR &#x3d; 1.422, 95% CI &#x3d; 1.109&#x2013;1.824, P &#x3d; 0.006 &#x3c; 0.01; TT vs. CC: OR &#x3d; 1.923, 95% CI &#x3d; 1.232&#x2013;3.004, P &#x3d; 0.004 &#x3c; 0.01; TC vs. CC: OR &#x3d; 1.383, 95% CI &#x3d; 1.074&#x2013;1.782, P &#x3d; 0.012 &#x3c; 0.01. These findings highlight a significant association between the TGF-&#x3b2;1 T869C polymorphism and susceptibility to autoimmune disease in the Asian population. However, no significant association was observed between Caucasian and mixed-race populations. A forest plot for the Asian group, using the recessive genetic model as an example, is illustrated in <xref ref-type="fig" rid="F2">Figure 2</xref>.</p>
<table-wrap id="T3" position="float">
<label>TABLE 3</label>
<caption>
<p>Ethnic subgroup analysis of TGF-&#x3b2;1 T869C and autoimmune diseases.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th rowspan="2" align="center">rs1982073</th>
<th rowspan="2" align="center">Comparison</th>
<th rowspan="2" align="center">No.of studies</th>
<th colspan="3" align="center">Test of association</th>
<th rowspan="2" align="center">Model</th>
<th colspan="3" align="center">Test of heterogeneity</th>
<th colspan="2" align="center">Publication bias</th>
</tr>
<tr>
<th align="center">OR</th>
<th align="center">95% CI</th>
<th align="center">P Value</th>
<th align="center">Q</th>
<th align="center">P Value</th>
<th align="center">I2 (%)</th>
<th align="center">P begg</th>
<th align="center">P egger</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td rowspan="5" align="center">Asian</td>
<td align="center">TT versus CC CT</td>
<td align="center">14</td>
<td align="center">1.540</td>
<td align="center">1.099&#x2013;2.157</td>
<td align="center">0.012</td>
<td align="center">R</td>
<td align="center">54.06</td>
<td align="center">0.000</td>
<td align="center">76.0</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">14</td>
<td align="center">1.599</td>
<td align="center">1.164&#x2013;2.196</td>
<td align="center">0.004</td>
<td align="center">R</td>
<td align="center">49.18</td>
<td align="center">0.000</td>
<td align="center">73.6</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">14</td>
<td align="center">1.422</td>
<td align="center">1.109&#x2013;1.824</td>
<td align="center">0.006</td>
<td align="center">R</td>
<td align="center">82.74</td>
<td align="center">0.000</td>
<td align="center">84.3</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">14</td>
<td align="center">1.923</td>
<td align="center">1.232&#x2013;3.004</td>
<td align="center">0.004</td>
<td align="center">R</td>
<td align="center">62.09</td>
<td align="center">0.000</td>
<td align="center">79.1</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">14</td>
<td align="center">1.383</td>
<td align="center">1.074&#x2013;1.782</td>
<td align="center">0.012</td>
<td align="center">R</td>
<td align="center">27.48</td>
<td align="center">0.011</td>
<td align="center">52.7</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td rowspan="5" align="center">Mixed</td>
<td align="center">TT versus CC CT</td>
<td align="center">5</td>
<td align="center">0.947</td>
<td align="center">0.732&#x2013;1.224</td>
<td align="center">0.676</td>
<td align="center">F</td>
<td align="center">4.68</td>
<td align="center">0.322</td>
<td align="center">14.5</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">5</td>
<td align="center">0.744</td>
<td align="center">0.562&#x2013;0.986</td>
<td align="center">0.039</td>
<td align="center">F</td>
<td align="center">7.37</td>
<td align="center">0.117</td>
<td align="center">45.8</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">5</td>
<td align="center">0.888</td>
<td align="center">0.756&#x2013;1.043</td>
<td align="center">0.146</td>
<td align="center">F</td>
<td align="center">7.67</td>
<td align="center">0.105</td>
<td align="center">47.8</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">5</td>
<td align="center">0.892</td>
<td align="center">0.400&#x2013;1.992</td>
<td align="center">0.781</td>
<td align="center">R</td>
<td align="center">19.70</td>
<td align="center">0.001</td>
<td align="center">79.7</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">5</td>
<td align="center">0.747</td>
<td align="center">0.557&#x2013;1.003</td>
<td align="center">0.052</td>
<td align="center">F</td>
<td align="center">5.92</td>
<td align="center">0.206</td>
<td align="center">32.4</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td rowspan="5" align="center">Caucasian</td>
<td align="center">TT versus CC CT</td>
<td align="center">13</td>
<td align="center">0.947</td>
<td align="center">0.824&#x2013;1.089</td>
<td align="center">0.444</td>
<td align="center">F</td>
<td align="center">18.14</td>
<td align="center">0.111</td>
<td align="center">33.9</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">13</td>
<td align="center">1.101</td>
<td align="center">0.820&#x2013;1.478</td>
<td align="center">0.523</td>
<td align="center">R</td>
<td align="center">33.82</td>
<td align="center">0.001</td>
<td align="center">64.5</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">13</td>
<td align="center">1.043</td>
<td align="center">0.892&#x2013;1.220</td>
<td align="center">0.598</td>
<td align="center">R</td>
<td align="center">29.93</td>
<td align="center">0.003</td>
<td align="center">59.9</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">13</td>
<td align="center">1.125</td>
<td align="center">0.833&#x2013;1.518</td>
<td align="center">0.443</td>
<td align="center">R</td>
<td align="center">26.48</td>
<td align="center">0.009</td>
<td align="center">54.7</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">13</td>
<td align="center">1.114</td>
<td align="center">0.803&#x2013;1.547</td>
<td align="center">0.517</td>
<td align="center">R</td>
<td align="center">36.98</td>
<td align="center">0.000</td>
<td align="center">67.5</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Forest map of Asian recessive gene model.</p>
</caption>
<graphic xlink:href="fgene-16-1502921-g002.tif"/>
</fig>
</sec>
<sec id="s3-4">
<title>3.4 Disease-specific subgroup analysis of TGF-&#x3b2;1 T869C gene polymorphism</title>
<p>The association between TGF-&#x3b2;1 T869C gene polymorphism and specific autoimmune diseases, including rheumatoid arthritis (RA), systemic lupus erythematosus (SLE), and systemic sclerosis (SSC), was assessed using disease-specific subgroup analysis. The analysis included 17 studies on RA, 7 on SLE, and 6 on SSC, as shown in <xref ref-type="table" rid="T4">Table 4</xref>. In the case of rheumatoid arthritis, all five genetic models revealed a significant correlation: TT vs. TC &#x2b; CC: OR &#x3d; 1.418, 95% CI &#x3d; 1.097&#x2013;1.832, P &#x3d; 0.008 &#x3c; 0.01; TT &#x2b; TC vs. CC: OR &#x3d; 1.747, 95% CI &#x3d; 1.330&#x2013;2.295, P &#x3d; 0.000 &#x3c; 0.01; T vs. C: OR &#x3d; 1.468, 95% CI &#x3d; 1.210&#x2013;1.781, P &#x3d; 0.001 &#x3c; 0.01; TT vs. CC: OR &#x3d; 1.937, 95% CI &#x3d; 1.373&#x2013;2.734, P &#x3d; 0.001 &#x3c; 0.01; TC vs. CC: OR &#x3d; 1.555, 95% CI &#x3d; 1.199&#x2013;2.016, P &#x3d; 0.001 &#x3c; 0.01. However, no significant association was observed between TGF-&#x3b2;1 T869C gene polymorphism and susceptibility to SLE or SSC. A forest plot for the RA subgroup, illustrating the recessive genetic model, is shown in <xref ref-type="fig" rid="F3">Figure 3</xref>.</p>
<table-wrap id="T4" position="float">
<label>TABLE 4</label>
<caption>
<p>TGF-&#x3b2;1 T869C and autoimmune diseases disease grouping analysis.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th rowspan="2" align="center">Diseases</th>
<th rowspan="2" align="center">Comparison</th>
<th rowspan="2" align="left">No.of studies</th>
<th colspan="3" align="center">Test of association</th>
<th rowspan="2" align="center">Model</th>
<th colspan="3" align="center">Test of heterogeneity</th>
</tr>
<tr>
<th align="center">OR</th>
<th align="center">95% CI</th>
<th align="center">P Value</th>
<th align="center">Q</th>
<th align="center">P</th>
<th align="center">I2 (%)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td rowspan="5" align="center">SSC</td>
<td align="center">TT versus CC CT</td>
<td align="center">7</td>
<td align="center">0.879</td>
<td align="center">0.593&#x2013;1.303</td>
<td align="center">0.520</td>
<td align="center">R</td>
<td align="center">12.47</td>
<td align="center">0.052</td>
<td align="center">51.9</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">7</td>
<td align="center">0.804</td>
<td align="center">0.559&#x2013;1.154</td>
<td align="center">0.237</td>
<td align="center">R</td>
<td align="center">11.43</td>
<td align="center">0.076</td>
<td align="center">47.5</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">7</td>
<td align="center">0.869</td>
<td align="center">0.664&#x2013;1.138</td>
<td align="center">0.307</td>
<td align="center">R</td>
<td align="center">16.03</td>
<td align="center">0.014</td>
<td align="center">62.6</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">7</td>
<td align="center">0.739</td>
<td align="center">0.426&#x2013;1.281</td>
<td align="center">0.281</td>
<td align="center">R</td>
<td align="center">16.4</td>
<td align="center">0.012</td>
<td align="center">63.4</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">7</td>
<td align="center">0.869</td>
<td align="center">0.667&#x2013;1.132</td>
<td align="center">0.297</td>
<td align="center">F</td>
<td align="center">7.5</td>
<td align="center">0.277</td>
<td align="center">20.0</td>
</tr>
<tr>
<td rowspan="5" align="center">SLE</td>
<td align="center">TT versus CC CT</td>
<td align="center">6</td>
<td align="center">0.914</td>
<td align="center">0.736&#x2013;1.136</td>
<td align="center">0.418</td>
<td align="center">F</td>
<td align="center">6.41</td>
<td align="center">0.268</td>
<td align="center">22.1</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">6</td>
<td align="center">0.900</td>
<td align="center">0.715&#x2013;1.132</td>
<td align="center">0.366</td>
<td align="center">F</td>
<td align="center">5.61</td>
<td align="center">0.346</td>
<td align="center">10.9</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">6</td>
<td align="center">0.932</td>
<td align="center">0.816&#x2013;1.066</td>
<td align="center">0.304</td>
<td align="center">F</td>
<td align="center">5.93</td>
<td align="center">0.313</td>
<td align="center">15.7</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">6</td>
<td align="center">1.479</td>
<td align="center">0.895&#x2013;2.444</td>
<td align="center">0.127</td>
<td align="center">R</td>
<td align="center">15.74</td>
<td align="center">0.008</td>
<td align="center">68.2</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">6</td>
<td align="center">0.914</td>
<td align="center">0.719&#x2013;1.162</td>
<td align="center">0.464</td>
<td align="center">F</td>
<td align="center">5.81</td>
<td align="center">0.326</td>
<td align="center">13.9</td>
</tr>
<tr>
<td rowspan="5" align="center">RA</td>
<td align="center">TT versus CC CT</td>
<td align="center">17</td>
<td align="center">1.418</td>
<td align="center">1.097&#x2013;1.832</td>
<td align="center">0.008</td>
<td align="center">R</td>
<td align="center">57.82</td>
<td align="center">0</td>
<td align="center">72.3</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">17</td>
<td align="center">1.747</td>
<td align="center">1.330&#x2013;2.295</td>
<td align="center">0.000</td>
<td align="center">R</td>
<td align="center">54.33</td>
<td align="center">0</td>
<td align="center">70.5</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">17</td>
<td align="center">1.468</td>
<td align="center">1.210&#x2013;1.781</td>
<td align="center">0.000</td>
<td align="center">R</td>
<td align="center">82.24</td>
<td align="center">0</td>
<td align="center">80.5</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">17</td>
<td align="center">1.937</td>
<td align="center">1.373&#x2013;2.734</td>
<td align="center">0.000</td>
<td align="center">R</td>
<td align="center">61.14</td>
<td align="center">0</td>
<td align="center">73.8</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">17</td>
<td align="center">1.555</td>
<td align="center">1.199&#x2013;2.016</td>
<td align="center">0.001</td>
<td align="center">R</td>
<td align="center">43.26</td>
<td align="center">0</td>
<td align="center">63.0</td>
</tr>
<tr>
<td rowspan="5" align="center">SS</td>
<td align="center">TT versus CC CT</td>
<td align="center">1</td>
<td align="center">1.104</td>
<td align="center">0.608&#x2013;2.006</td>
<td align="center">0.745</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">1</td>
<td align="center">0.676</td>
<td align="center">0.333&#x2013;1.372</td>
<td align="center">0.278</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">1</td>
<td align="center">0.910</td>
<td align="center">0.618&#x2013;1.338</td>
<td align="center">0.631</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">1</td>
<td align="center">0.780</td>
<td align="center">0.345&#x2013;1.762</td>
<td align="center">0.550</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">1</td>
<td align="center">0.622</td>
<td align="center">0.296&#x2013;1.309</td>
<td align="center">0.211</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td rowspan="5" align="center">JIA</td>
<td align="center">TT versus CC CT</td>
<td align="center">1</td>
<td align="center">0.570</td>
<td align="center">0.323&#x2013;1.005</td>
<td align="center">0.052</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT TC versus CC</td>
<td align="center">1</td>
<td align="center">0.356</td>
<td align="center">0.168&#x2013;0.756</td>
<td align="center">0.007</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">T versus C</td>
<td align="center">1</td>
<td align="center">0.584</td>
<td align="center">0.401&#x2013;0.850</td>
<td align="center">0.005</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TT versus CC</td>
<td align="center">1</td>
<td align="center">0.287</td>
<td align="center">0.124&#x2013;0.666</td>
<td align="center">0.004</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
<tr>
<td align="center">TC versus CC</td>
<td align="center">1</td>
<td align="center">0.403</td>
<td align="center">0.184&#x2013;0.882</td>
<td align="center">0.023</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
<td align="center">-</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Forest map of RA recessive gene model.</p>
</caption>
<graphic xlink:href="fgene-16-1502921-g003.tif"/>
</fig>
</sec>
<sec id="s3-5">
<title>3.5 Sensitivity analysis and publication bias assessment</title>
<p>The sensitivity analysis demonstrated that the odds ratios (OR) and 95% confidence intervals (CI) for the comparisons TT &#x2b; TC vs. CC, TT vs. TC &#x2b; CC, T vs. C, TT vs. CC, and TC vs. CC remained consistent. This indicates that the results were statistically robust, as illustrated in <xref ref-type="fig" rid="F4">Figure 4</xref>.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Sensitivity analysis of TGF-&#x3b2;1 T869C polymorphism.</p>
</caption>
<graphic xlink:href="fgene-16-1502921-g004.tif"/>
</fig>
<p>A funnel plot that showed no apparent asymmetry was constructed to assess publication bias. Additionally, both Begg&#x2019;s test and Egger&#x2019;s test were performed, and neither test provided evidence of publication bias (T vs. C: Begg&#x2019;s test, P &#x3d; 0.277; Egger&#x2019;s test, P &#x3d; 0.187), as shown in <xref ref-type="fig" rid="F5">Figure 5</xref>.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Begg funnel plot.</p>
</caption>
<graphic xlink:href="fgene-16-1502921-g005.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>4 Discussions</title>
<p>Autoimmune diseases are characterized by the immune system erroneously recognizing normal tissues and cells as foreign entities, leading to an aggressive immune response. Although the precise mechanisms underlying these conditions remain elusive, they are thought to result from a complex interplay between genetic predisposition, environmental influences, gender differences, and epigenetic modifications (<xref ref-type="bibr" rid="B18">Li et al., 2020</xref>; <xref ref-type="bibr" rid="B15">Kwiatkowska and Ma&#x15b;li&#x144;ska et al., 2020</xref>). Cytokines, a diverse group of small proteins, are central in driving autoimmune responses. Cytokines play a vital role in regulating and mediating immune system functions, and their signaling is essential for a range of biological processes, including cell development, tissue repair, aging, and immune responses (<xref ref-type="bibr" rid="B6">de Gruijter et al., 2022</xref>; <xref ref-type="bibr" rid="B16">Lau et al., 2021</xref>).</p>
<p>Transforming Growth Factor Beta (TGF-&#x3b2;) is a multifunctional cytokine belonging to a family of growth factors present in the extracellular matrix. Its primary function is to suppress immune cell activity and prevent excessive immune response (<xref ref-type="bibr" rid="B19">Li et al., 2006</xref>). The TGF-&#x3b2; family consists of several subtypes including TGF-&#x3b2;1, TGF-&#x3b2;2, and TGF-&#x3b2;3. Among these, TGF-&#x3b2;1 plays a crucial role in the development of autoimmune diseases by inhibiting the activity of T cells, B cells, macrophages, and other immune cells (<xref ref-type="bibr" rid="B31">Prud&#x2019;homme and Piccirillo et al., 2000</xref>). Polymorphisms in TGF-&#x3b2;1 may theoretically affect its expression, potentially increasing the risk of autoimmune diseases. Research has indicated that TGF-&#x3b2;1 produced by regulatory T cells (Tregs) is essential for modulating allergic and autoimmune responses. However, a gradual reduction in TGF-&#x3b2;1 transcription within Tregs leads to a pronounced immune dysregulation (<xref ref-type="bibr" rid="B40">Turner et al., 2020</xref>). Additionally, various studies suggest a significant association between elevated TGF-&#x3b2; gene expression and autoimmune disease activity, underscoring its involvement in disease progression (<xref ref-type="bibr" rid="B45">Zaninoni et al., 2023</xref>). Currently, four primary genetic polymorphisms of TGF-&#x3b2;1 have been identified: 800G &#x3e; A, &#x2212;509C &#x3e; T, &#x2b;869T &#x3e; C, and &#x2b;915G/C. Among these, the TGF-&#x3b2;1 T869C polymorphism is the most extensively studied polymorphism in the TGF-&#x3b2;1 gene. Numerous studies have demonstrated an association between the T869C polymorphism and susceptibility to various autoimmune diseases such as rheumatoid arthritis, systemic lupus erythematosus, and systemic sclerosis. This polymorphism, located in the first exon of TGF-&#x3b2;1, involves an amino acid substitution from leucine (Leu) to proline (Pro), which may affect the function of the TGF-&#x3b2;1 signal peptide and its immune-modulating effects (<xref ref-type="bibr" rid="B38">Sugiura et al., 2002</xref>). The functional significance of this polymorphism in the regulation of TGF-&#x3b2;1 activity has been a central focus of research. Epidemiological evidence further indicates a strong correlation between the T869C polymorphism and the incidence of autoimmune diseases in Asian populations, underscoring the relevance of examining this polymorphism within this demographic. The objective of this study was to undertake a more comprehensive evaluation of the link between TGF-&#x3b2;1 T869C polymorphism and susceptibility to autoimmune diseases by encompassing a wider spectrum of autoimmune conditions and incorporating the latest literature. Investigating the T869C polymorphism not only facilitates comparison and analysis with previous research findings but may also uncover novel therapeutic targets and deepen our understanding of disease mechanisms. Consequently, based on the extensive research in the literature, biological importance, genetic significance, epidemiological data, consistency in study design, clinical relevance, innovation, the necessity of the study, and statistical power, this meta-analysis selected the T869C polymorphism as the focus of this research to explore the role of the TGF-&#x3b2;1 T869C genetic polymorphism in the development of autoimmune diseases, providing a basis for the development of diagnostics and treatments for autoimmune diseases.</p>
<p>Research findings suggest that in Asian populations, carriage of the T allele may confer a risk factor for autoimmune diseases, with individuals possessing this allele being more likely to develop rheumatoid arthritis (RA). Following the initial exploration by Alayli et al. on the association between the TGF-&#x3b2;1 T869C polymorphism and RA in a Turkish population, this polymorphism has garnered increasing attention in the context of autoimmune diseases, providing early evidence for a link between the TGF-&#x3b2;1 T869C polymorphism and an increased risk of RA, which laid the groundwork for subsequent studies (<xref ref-type="bibr" rid="B1">Alayli et al., 2009</xref>). Mattey et al. demonstrated that the TGF-&#x3b2;1 T869C polymorphism correlates with disease outcomes and mortality rates among patients with RA, underscoring the potential impact of the T allele on RA severity (<xref ref-type="bibr" rid="B23">Mattey et al., 2005</xref>). In the 2010s, Zhang L and colleagues published a meta-analysis encompassing 21 studies, identifying a potential association between the TGF-&#x3b2;1 T869C promoter polymorphism and RA, particularly within Asian populations (OR &#x3d; 0.81, P &#x3d; 0.003) (<xref ref-type="bibr" rid="B46">Zhang et al., 2013</xref>). This analysis provides compelling evidence supporting the connection between the TGF-&#x3b2;1 T869C polymorphism and increased autoimmune disease risk in Asians, corroborating previous findings and elucidating TGF-&#x3b2;1&#x2019;s pivotal role in immune response regulation and inflammation promotion. However, the study was not without its limitations, including the inclusion of studies that failed to exclude cases that did not conform to the Hardy-Weinberg equilibrium (HWE), indicating a need for further investigation. Building on this, Hussein et al. highlighted the possible link between the TGF-&#x3b2;1 T869C polymorphism and RA disease progression, whereas Saad et al. presented genetic evidence of associations between multiple polymorphisms, including TGF-&#x3b2;1 and RA. Shaker et al. reaffirmed the link between the TGF-&#x3b2;1 T869C polymorphism and RA susceptibility, with findings supported across a broad spectrum of Asian populations. Recently, Zhu et al. investigated the TGF-&#x3b2;1 mechanism in RA and revealed that TGF-&#x3b2;1 facilitates the migration and invasion of fibroblast-like synoviocytes via the TGF-&#x3b2;1/Smad signaling pathway (<xref ref-type="bibr" rid="B49">Zhu et al. 2019</xref>). Their results align with those of this meta-analysis, indicating that the T allele is a risk factor for RA in Asian populations. Furthermore, the T allele of TGF-&#x3b2;1 may be correlated with inflammatory activity, nodular disease, and adverse prognosis in patients with RA. Hassan et al. observed a link between the TGF-&#x3b2;1 T869C polymorphism and disease activity in Egyptian patients with RA, reinforcing the role of the T allele in RA pathogenesis. Collectively, these studies suggest that the TGF-&#x3b2;1 T869C polymorphism could serve as a predictive biomarker for RA and other autoimmune diseases, which is crucial for the early diagnosis and personalized treatment strategy development. While existing research has offered valuable insights, further investigation is essential to explore the interactions between the TGF-&#x3b2;1 T869C polymorphism and additional genetic and environmental factors as well as their impact on autoimmune disease development and progression.</p>
<p>This meta-analysis included 32 case&#x2013;control studies, including 4,304 cases and 4,664 controls, as documented in 31 articles. The objective of this study was to evaluate the correlation between the TGF-&#x3b2;1 T869C polymorphism and the propensity for autoimmune diseases. Both allele and homozygous models demonstrated significant associations with susceptibility to autoimmune diseases. An ethnic subgroup analysis revealed that across all genetic models, the TGF-&#x3b2;1 T869C polymorphism was markedly associated with autoimmune disease susceptibility in Asian populations, a finding not observed in Caucasian or mixed-race populations. To ascertain the reliability of the study, the researchers evaluated publication bias using both Egger&#x2019;s and Begg&#x2019;s tests in addition to performing a sensitivity analysis.</p>
<p>This meta-analysis had several limitations. It included only six studies on systemic lupus erythematosus, seven on systemic sclerosis, one on Sj&#xf6;gren&#x2019;s syndrome, and a single study on juvenile idiopathic arthritis. The limited number of studies and their inherent heterogeneity necessitate further verification to substantiate the correlation between TGF-&#x3b2;1 T869C polymorphism and autoimmune disease susceptibility. Autoimmune diseases are influenced by a multitude of factors, including genetics, sex, and environmental factors. Additionally, the absence of access to the original data in this study restricts the capacity for a more comprehensive analysis of the interactions between the TGF-&#x3b2;1 T869C polymorphism and environmental influences, lifestyle, and clinical manifestations. No predictive models have been established to account for potential confounding factors, such as sex, age, and environmental conditions. Future research should focus on gene-gene and gene-environment interactions to more effectively assess the relationship between the TGF-&#x3b2;1 T869C polymorphism and autoimmune disease susceptibility. Moreover, the study did not incorporate TGF-&#x3b2;1 levels in its data analysis, which precludes the elucidation of the relationship between TGF-&#x3b2;1 level variations and autoimmune diseases. While this study does not directly evaluate TGF-&#x3b2;1 levels, the existing literature indicates that fluctuations in TGF-&#x3b2;1 levels are associated with disease activity in rheumatoid arthritis (RA). TGF-&#x3b2;1, which plays a dual role in regulating immune responses and suppressing inflammation, may be associated with RA severity and progression. Asian populations, with their distinct genetic backgrounds and environmental exposures, may exhibit a unique relationship between TGF-&#x3b2;1 gene polymorphisms and RA susceptibility. Environmental factors, including infections, lifestyle, and dietary habits, may interact with genetic factors to collectively influence the expression and function of TGF-&#x3b2;1. This study underscores the importance of measuring TGF-&#x3b2;1 levels in future research, particularly in Asian patients with RA. Gaining insight into the relationship between TGF-&#x3b2;1 levels and the T allele could aid in uncovering the molecular mechanisms of RA and inform the development of novel treatment strategies. However, due to the constraints of this study&#x2019;s design and the data available, direct measurement data of TGF-&#x3b2;1 levels were not provided. This study primarily relies on genetic data, offering insights into the relationship between TGF-&#x3b2;1 gene polymorphisms and RA susceptibility.</p>
<p>In summary, despite certain limitations, the discovery of a significant association between the T allele of the TGF-&#x3b2;1 gene and susceptibility to disease in Asian patients with rheumatoid arthritis (RA) is a noteworthy finding that merits further investigation. This meta-analysis, examining the link between the TGF-&#x3b2;1 T869C polymorphism and autoimmune disease susceptibility across 32 studies (31 articles), substantially expands the scope of previous meta-analyses, thereby bolstering the statistical strength of the collective analysis. Within this dataset, 17 studies specifically addressed rheumatoid arthritis, offering more robust evidence to affirm the connection between the TGF-&#x3b2;1 T869C polymorphism and RA susceptibility. Consequently, the meta-analysis concluded that individuals carrying the T allele might be at an elevated risk of developing autoimmune diseases, particularly RA, in Asian populations. The heightened risk of RA development among patients with the T allele underscores the need for additional research on this genetic correlation.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s5">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec sec-type="author-contributions" id="s6">
<title>Author contributions</title>
<p>YZ: Conceptualization, Investigation, Project administration, Software, Writing&#x2013;original draft, Writing&#x2013;review and editing. AQ: Investigation, Software, Writing&#x2013;original draft. YC: Conceptualization, Investigation, Writing&#x2013;original draft. ML: Data curation, Methodology, Writing&#x2013;review and editing. CH: Formal Analysis, Methodology, Supervision, Writing&#x2013;review and editing.</p>
</sec>
<sec sec-type="funding-information" id="s7">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work was supported by the National Natural Science Foundation of China [Project No. 82104782] and Collaborative Innovation Project of Universities in Anhui Province, China [Project No. GXXT-2021-085]; Special Project for the Institute of Modernisation of Xin&#x2019;an Medicine and Traditional Chinese Medicine, Great Health Research Institute [Project No. 2023CXMMTCM004]; Anhui Province Clinical Medical Research Translation Special Project [Project No. 202304295107020114]. This work was supported by the First Affiliated Hospital of Anhui University of Chinese Medicine.</p>
</sec>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
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<title>Generative AI statement</title>
<p>The author(s) declare that no Generative AI was used in the creation of this manuscript.</p>
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<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fgene.2024.1502921/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fgene.2024.1502921/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Table1.docx" id="SM1" mimetype="application/docx" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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