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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Genet.</journal-id>
<journal-title>Frontiers in Genetics</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Genet.</abbrev-journal-title>
<issn pub-type="epub">1664-8021</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
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<article-meta>
<article-id pub-id-type="publisher-id">1199549</article-id>
<article-id pub-id-type="doi">10.3389/fgene.2023.1199549</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Genetics</subject>
<subj-group>
<subject>Systematic Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>A meta-analysis of the pooled impact of <italic>CYP7A1</italic> single nucleotide polymorphisms on serum lipid responses to statins</article-title>
<alt-title alt-title-type="left-running-head">Lim et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fgene.2023.1199549">10.3389/fgene.2023.1199549</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Lim</surname>
<given-names>Megan Yu Cai</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2258393/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Tee</surname>
<given-names>Jia Rong</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Yau</surname>
<given-names>Wai-Ping</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1093355/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ho</surname>
<given-names>Han Kiat</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/198314/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Pharmacy</institution>, <institution>Faculty of Science</institution>, <institution>National University of Singapore</institution>, <addr-line>Singapore</addr-line>, <country>Singapore</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Mathematics</institution>, <institution>Faculty of Science</institution>, <institution>National University of Singapore</institution>, <addr-line>Singapore</addr-line>, <country>Singapore</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/682502/overview">Yaya Kassogue</ext-link>, Universit&#x00E9; des Sciences, des Techniques et des Technologies de Bamako, Mali</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2272169/overview">Tazzite Amal</ext-link>, University of Hassan II Casablanca, Morocco</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/566016/overview">Ramc&#xe9;s Falf&#xe1;n-Valencia</ext-link>, National Institute of Respiratory Diseases-Mexico (INER), Mexico</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Megan Yu Cai Lim, <email>limyucai.megan@gmail.com</email>
</corresp>
</author-notes>
<pub-date pub-type="epub">
<day>09</day>
<month>06</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1199549</elocation-id>
<history>
<date date-type="received">
<day>03</day>
<month>04</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>31</day>
<month>05</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Lim, Tee, Yau and Ho.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Lim, Tee, Yau and Ho</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>
<bold>Background and Aims</bold>: Various publications suggested that there is an association between <italic>CYP7A1</italic> single nucleotide polymorphisms (SNP) and a reduced response to statin therapy, but the results were inconsistent. This study aimed to collectively review these publications to appraise the effect of statins on cholesterol control in carriers of <italic>CYP7A1</italic> variant alleles.</p>
<p>
<bold>Methods:</bold> PUBMED, Cochrane and EMBASE were searched systematically to identify reported studies on the lipid responses to statin treatment between carriers of the variant allele <italic>versus</italic> the non-variant allele of <italic>CYP7A1</italic> SNPs. The change from baseline in lipid responses for all included studies were calculated using weighted mean differences (WMD) (with 95% confidence interval (CI)). A meta-analysis was conducted to pool results using either the random-effects model or the fixed effects model.</p>
<p>
<bold>Results:</bold> A total of 6 publications comprising of 1,686 subjects for the assessment of total cholesterol, LDL-C and HDL-C and 1,156 subjects for the assessment of triglycerides were included in the meta-analyses. Subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (&#x2212;204 A/C (rs3808607), &#x2212;278 A/C (rs3808607) and rs8192875) had a greater reduction in total cholesterol (overall WMD -0.17, 95% CI -0.29, &#x2212;0.06) and LDL-C levels (overall WMD -0.16, 95% CI -0.26, &#x2212;0.05) as compared with subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs when administered a statin.</p>
<p>
<bold>Conclusion:</bold> The presence of variant allele of <italic>CYP7A1</italic> SNPs may result in suboptimal control of total cholesterol and LDL-C levels as compared with individuals who do not carry the variant allele, when administered an equivalent dose of statin.</p>
</abstract>
<kwd-group>
<kwd>pharmacogenomics</kwd>
<kwd>CYP7A1</kwd>
<kwd>single nucleotide polymorphisms</kwd>
<kwd>statins</kwd>
<kwd>lipid response</kwd>
</kwd-group>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Pharmacogenetics and Pharmacogenomics</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Good cholesterol control is vital to keep cardiovascular diseases at bay and ensure normal functioning of essential cellular processes in the body. In the human body, cholesterol is either taken up from dietary sources or predominantly synthesized <italic>de novo</italic> in the liver. (<xref ref-type="bibr" rid="B15">Lecerf and de Lorgeril, 2011</xref>). Excess cholesterol is subsequently removed via conversion into bile acids, where the process is regulated by the rate-limiting enzyme, cholesterol 7&#x3b1;-hydroxylase (<italic>CYP7A1</italic>). (<xref ref-type="bibr" rid="B22">Pandak et al., 2001</xref>). In conditions where cholesterol levels require drug interventions to achieve control, 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase inhibitors, i.e., statins, are the cornerstone therapy. (<xref ref-type="bibr" rid="B7">Crismaru et al., 2020</xref>).</p>
<p>However, inter-individual differences in serum lipid responses to statin treatment have been frequently reported, of which genetics is one important intrinsic factor that contribute to these differences. There is increasing evidence to show that <italic>CYP7A1</italic> is highly polymorphic and patients harbouring <italic>CYP7A1</italic> polymorphisms, such as &#x2212;204 A/C (rs3808607), &#x2212;278 A/C (rs3808607) and rs8192875), experienced differential lipid lowering responses to statins. (<xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B13">Jiang et al., 2012</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B20">Na Liu et al., 2020</xref>).</p>
<p>Multiple studies have shown that there is an association between <italic>CYP7A1</italic> polymorphisms and a reduced response to statin therapy, where homozygous carriers of the variant allele that encode for the reduced expression of <italic>CYP7A1</italic> experienced less than desirable cholesterol control when administered the same dose of statin as non-carriers. (<xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B13">Jiang et al., 2012</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B20">Na Liu et al., 2020</xref>). The implication is that over time, such patients who are resistant to therapy may be subjected to a higher statin dose or polypharmacy, or experience poor cholesterol control, consequently leading to intolerable toxicities, risk of drug-drug interactions and disease progression. Because of this, there has been increasing research interest in identifying and studying functional <italic>CYP7A1</italic> single nucleotide polymorphisms (SNPs) and their impact across different populations.</p>
<p>While there is an increasing number of studies looking into this, the sample sizes of the individual studies were small, and results were inconsistent. Hence, this systematic review and meta-analysis aimed to pool the relevant studies together to provide a larger sample size for enhanced statistical power so as to ascertain any small but relevant effects of <italic>CYP7A1</italic> SNPs on the cholesterol lowering response to statins.</p>
<p>In this review, we aimed to answer the following research question: In individuals receiving statin treatment, do <italic>CYP7A1</italic> SNPs affect the serum lipid responses to the treatment? Specifically, we are interested in comparing the lipid response outcomes to statin treatment between carriers of the variant allele <italic>versus</italic> the non-variant allele of <italic>CYP7A1</italic> SNPs.</p>
</sec>
<sec sec-type="methods" id="s2">
<title>2 Methods</title>
<sec id="s2-1">
<title>2.1 Literature search strategy</title>
<p>This systematic review was performed based on the Preferred Reporting Items for Systematic Reviews and Meta-analyses (PRISMA) guidelines. (<xref ref-type="bibr" rid="B17">Liberati et al., 2009</xref>). Medical and health sciences databases, specifically PUBMED, Cochrane and EMBASE, were used for the literature search. The literature search strategy used was adapted to suit the search framework of different databases. The search strategy for PUBMED, Cochrane and EMBASE are appended for replicability purposes (<xref ref-type="sec" rid="s11">Supplementary Tables S1,S2,S3</xref>). The references of included studies were searched to identify additional relevant articles. Two independent reviewers were engaged through each phase of review and throughout the entire review process, and were responsible for the screening of study titles, reviewing of abstracts and collection of data from the full text of each report.</p>
</sec>
<sec id="s2-2">
<title>2.2 Study selection criteria</title>
<p>Reports of any study design that investigated the impact of genotypes of a <italic>CYP7A1</italic> SNP on lipid responses to a statin and published in English were included in the systematic review, without date restrictions. Studies were included if they were conducted in human participants, with neither age restrictions nor confining the indication for statin use to a specific disease. For this systematic review, we did not confine the inclusion criteria to a specific genetic model for the analysis of the association between the outcome parameters and the genotypes, but the goodness-of-fit of the genotypes to the Hardy-Weinberg equilibrium were assessed. We also did not confine the inclusion criteria to a specific intensity of statin therapy, although the intensity of statin therapy was recorded and described in accordance to American College of Cardiology (ACC) and American Heart Association (AHA) lipid guidelines. According to the ACC/AHA guidelines, statins are broadly classified into three levels: high-intensity (at least 50% reduction in LDL), moderate-intensity (30%&#x2013;49% reduction in LDL) and low-intensity (less than 30% reduction in LDL) (<xref ref-type="sec" rid="s11">Supplementary Table S4</xref>). (<xref ref-type="bibr" rid="B27">Scott et al., 2018</xref>; <xref ref-type="bibr" rid="B9">Donna K Arnett et al., 2019</xref>). We did not restrict the studies to a specific genotyping method for the <italic>CYP7A1</italic> SNPs. Pre-clinical studies, review papers and studies with insufficient data for analyses were excluded.</p>
</sec>
<sec id="s2-3">
<title>2.2 Outcomes of interest</title>
<p>The outcomes of interest were the treatment effects of statins on lipid parameters (namely, total cholesterol, low density lipoprotein cholesterol (LDL-C), high density lipoprotein cholesterol (HDL-C) and triglycerides (TG)) between carriers and non-carriers of <italic>CYP7A1</italic> SNPs.</p>
</sec>
<sec id="s2-4">
<title>2.3 Data extraction and management</title>
<p>A data extraction form by means of a Microsoft Excel checklist with a standardized format was used to retrieve the relevant information from the individual studies. The key data items recorded included study design, study duration, ethnicity, country, type and location of SNP, allelic and genotype status and frequencies, patient demographics, information related to treatment such as the dose, frequency and type of statins used, as well as information related to outcomes such as change from baseline lipid values or values of pre- and post-intervention lipid parameters if the former is not available.</p>
<p>In order to allow quantification of the primary outcome measure, the means of baseline lipid values, post administration lipid values, change from baseline lipid values, as well as standard deviations of baseline, endpoint and change from baseline, should be reported in the selected studies. If only means and standard deviations of baseline and post-administration lipid values are provided, the mean and standard deviation of the change in lipid values were calculated using the following equations:<disp-formula id="equ1">
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</disp-formula>where &#x2018;r&#x2019; refers to the correlation coefficient that describes how the baseline and endpoint scores change in relation to each other within a group of participants. A value of 0.5 was assumed for &#x2018;r&#x2019;, and as the choice of 0.5 was arbitrary, the robustness of the study results was validated by imputing 0 and 0.8 in sensitivity analyses. (<xref ref-type="bibr" rid="B10">Fu, 2015</xref>).</p>
</sec>
<sec id="s2-5">
<title>2.4 Statistical analysis</title>
<p>The outcomes of interest were the treatment effects of statins on lipid parameters (namely, total cholesterol, low density lipoprotein cholesterol (LDL-C), high density lipoprotein cholesterol (HDL-C) and triglycerides (TG)) between carriers and non-carriers of <italic>CYP7A1</italic> SNPs. The treatment effects of statins ascertained through the change from baseline in lipid parameters (namely, total cholesterol, LDL-C, HDL-C and triglycerides) were meta-analysed and calculated as weighted mean differences (WMD) (with 95% CI). (<xref ref-type="bibr" rid="B11">Higgins JPT et al., 2022</xref>). Stratified analyses were also conducted based on ethnicity (White persons and non-White persons), SNP and the duration of statin treatment. As there is currently no consensus on a cut-off for treatment duration, the duration of statin treatment was stratified into two categories, namely, therapy of less than 12 weeks and therapy of at least 12 weeks. The Chi-square test and I<sup>2</sup> statistic were employed to determine the statistical heterogeneity, where significant heterogeneity was deemed to be present if I<sup>2</sup> was &#x3e;40% and <italic>p</italic>-value was &#x3c;0.10. When either condition for statistical heterogeneity was not met, the fixed-effects model was used for meta-analyses. Otherwise, a random-effects model was used to account for heterogeneity among studies. All meta-analyses were performed using Review Manager (RevMan), Version 5.4 (The Cochrane Collaboration, 2020).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>3 Results</title>
<sec id="s3-1">
<title>3.1 Included studies and study characteristics</title>
<p>A thorough electronic literature search identified 54 unique journal articles. From which, studies that were either animal studies, review papers, meta-analysis, unavailability of full text or deemed irrelevant to the topic were excluded (<xref ref-type="fig" rid="F1">Figure 1</xref>). A total of 11 studies were included after screening of titles and abstracts. Upon a comprehensive review of the article contents, a total of 6 studies were further excluded due to insufficient data for meta-analysis. One additional study was identified to be relevant to the topic in the process of the detailed review, which resulted in a total of 6 articles being included in the systematic review and analysis. The included studies were published between 2005 and 2021 (<xref ref-type="table" rid="T1">Table 1</xref>) (<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>; <xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>). Two of these studies were cohort studies, 2 were secondary analyses of randomized controlled trials and 2 were cross-sectional studies (<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>; <xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>). A total of 1,686 subjects were included for the assessment of total cholesterol, LDL-C and HDL-C, while a total of 1,156 subjects were included for the assessment of triglycerides in the analysis. Five studies ((<xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>)) were conducted with atorvastatin and 1 study ((<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>)) was conducted with pravastatin, with a moderate (LDL-C lowering of 30%&#x2013;49%) to high (LDL-C lowering of &#x2265;50%) dose intensity administered in all studies. In terms of study duration, 3 studies ((<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>; <xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>)) had a treatment duration of at least 12 weeks and 3 studies ((<xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>)) had a treatment duration of less than 12 weeks. Across the different SNPs analysed across the meta-analysis, 538 subjects carried the &#x2212;204 A&#x3e;C polymorphism, 342 subjects carried the &#x2212;278 A&#x3e;C polymorphism and 9 subjects carried the rs8192875 polymorphism. We noted that genotyping of <italic>CYP7A1</italic> SNPs in the studies was mostly carried by polymerase chain reaction (PCR) - based methods such as the PCR - restriction fragment length polymorphism (PCR-RFLP) method, with further validation by DNA sequencing (<xref ref-type="table" rid="T1">Table 1</xref>). (<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>; <xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Flow chart depicting the study selection process.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g001.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Characteristics of included studies (n &#x3d; 6).</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="center">References, year</th>
<th align="center">Study design</th>
<th align="center">No. of subjects (AA/AB &#x2b; BB)<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</th>
<th align="center">Mean age (aa/AB/BB)<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</th>
<th align="center">Gender (AA/AB &#x2b; BB)<xref ref-type="table-fn" rid="Tfn1">
<sup>a</sup>
</xref>
</th>
<th align="center">Single nucleotide polymorphism studied</th>
<th align="center">Genotyping method</th>
<th align="center">Drug used</th>
<th align="center">Duration of treatment</th>
<th align="center">Ethnicity</th>
<th colspan="2" align="center">Background disease condition</th>
<th align="center">Outcome measures</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="center">Kajinami et al., 2005 (<xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>)</td>
<td align="center">Secondary analyses of a randomized controlled trial</td>
<td align="center">96/228</td>
<td align="center">Male: 56 &#xb1; 12/57 &#xb1; 11/53 &#xb1; 11; Female: 61 &#xb1; 12/61 &#xb1; 10/58 &#xb1; 11</td>
<td align="center">Male: 59/136 Female: 37/92</td>
<td align="center">&#x2212;204 A&#x3e;C (rs3808607)</td>
<td align="center">Polymerase chain reaction&#x2014;restriction fragment length polymorphism (PCR-RFLP)</td>
<td align="center">Atorvastatin 10&#xa0;mg once daily</td>
<td align="center">52 weeks</td>
<td colspan="2" align="center">Mostly Caucasians (92%)</td>
<td align="center">Primary hypercholesterolemia</td>
<td align="center">Total cholesterol, LDL-C<xref ref-type="table-fn" rid="Tfn2">
<sup>b</sup>
</xref>, HDL-C<xref ref-type="table-fn" rid="Tfn3">
<sup>c</sup>
</xref>, triglycerides</td>
</tr>
<tr>
<td align="center">Hofman et al., 2005 (<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>)</td>
<td align="center">Secondary analyses of a randomized controlled trial</td>
<td align="center">155/208</td>
<td align="center">57 &#xb1; 8/56 &#xb1; 8/56 &#xb1; 8</td>
<td align="center">All males</td>
<td align="center">&#x2212;278 A&#x3e;C (rs3808607)</td>
<td align="center">PCR-RFLP and PCR followed by use of sequence detection system</td>
<td align="center">Pravastatin 40&#xa0;mg once daily</td>
<td align="center">96 weeks</td>
<td colspan="2" align="center">Caucasians</td>
<td align="center">Coronary Artery Disease</td>
<td align="center">Total cholesterol, LDL-C<xref ref-type="table-fn" rid="Tfn2">
<sup>b</sup>
</xref>, HDL-C<xref ref-type="table-fn" rid="Tfn3">
<sup>c</sup>
</xref>, triglycerides</td>
</tr>
<tr>
<td align="center">Poduri et al., 2010 (<xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>)</td>
<td align="center">Cross-sectional study</td>
<td align="center">&#x2212;204 A&#x3e;C: 116/149&#x2013;278 A&#x3e;C: 131/134</td>
<td align="center">47.52 &#xb1; 7.7<xref ref-type="table-fn" rid="Tfn4">
<sup>d</sup>
</xref>
</td>
<td align="center">Male: 222<xref ref-type="table-fn" rid="Tfn4">
<sup>d</sup>
</xref> Female: 43<xref ref-type="table-fn" rid="Tfn4">
<sup>d</sup>
</xref>
</td>
<td align="center">&#x2212;204 A&#x3e;C, &#x2212;278 A&#x3e;C (rs3808607)</td>
<td align="center">PCR-RFLP, further validated by random DNA sequencing</td>
<td align="center">Atorvastatin 20&#xa0;mg once daily</td>
<td align="center">6 weeks</td>
<td colspan="2" align="center">Indian</td>
<td align="center">Coronary Artery Disease</td>
<td align="center">Total cholesterol, LDL-C<xref ref-type="table-fn" rid="Tfn2">
<sup>b</sup>
</xref>, HDL-C<xref ref-type="table-fn" rid="Tfn3">
<sup>c</sup>
</xref>
</td>
</tr>
<tr>
<td align="center">Wei et al., 2011 (<xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>)</td>
<td align="center">Cohort study</td>
<td align="center">55/126</td>
<td align="center">53 &#xb1; 8.04/54 &#xb1; 7.77/57 &#xb1; 8.30</td>
<td align="center">All males</td>
<td align="center">&#x2212;204 A&#x3e;C (rs3808607)</td>
<td align="center">PCR-RFLP</td>
<td align="center">Atorvastatin 20&#xa0;mg once daily</td>
<td align="center">4 weeks</td>
<td colspan="2" align="center">Chinese</td>
<td align="center">Hyperlipidaemia</td>
<td align="center">Total cholesterol, LDL-C<xref ref-type="table-fn" rid="Tfn2">
<sup>b</sup>
</xref>, HDL-C<xref ref-type="table-fn" rid="Tfn3">
<sup>c</sup>
</xref>, triglycerides</td>
</tr>
<tr>
<td align="center">Liu et al., 2017 (<xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>)</td>
<td align="center">Cohort study</td>
<td align="center">162/9</td>
<td align="center">59.46 &#xb1; 8.21/57.22 &#xb1; 2.19/Nil</td>
<td align="center">Male: 118/5 Female: 42/4</td>
<td align="center">rs8192875</td>
<td align="center">iPLEX assay in conjunction with the MassARRAY platform</td>
<td align="center">Routine&#x2014;Less than atorvastatin 20&#xa0;mg once daily Intensive - atorvastatin 80&#xa0;mg once daily for 2&#xa0;days before and 40&#xa0;mg/day for 28 days after procedure</td>
<td align="center">30 days</td>
<td colspan="2" align="center">Chinese</td>
<td align="center">Non-ST Elevation Myocardial Infarction (NSTEMI)/Stable angina pectoris</td>
<td align="center">Total cholesterol, LDL-C<xref ref-type="table-fn" rid="Tfn2">
<sup>b</sup>
</xref>, HDL-C<xref ref-type="table-fn" rid="Tfn3">
<sup>c</sup>
</xref>, triglycerides</td>
</tr>
<tr>
<td align="center">Abed et al., 2021 (<xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>)</td>
<td align="center">Cross-sectional study</td>
<td align="center">82/35</td>
<td align="center">54.04 &#xb1; 9.71<xref ref-type="table-fn" rid="Tfn4">
<sup>d</sup>
</xref>
</td>
<td align="center">Male: 69<xref ref-type="table-fn" rid="Tfn4">
<sup>d</sup>
</xref> Female: 48<xref ref-type="table-fn" rid="Tfn4">
<sup>d</sup>
</xref>
</td>
<td align="center">&#x2212;204 A&#x3e;C (rs3808607)</td>
<td align="center">PCR-RFLP</td>
<td align="center">Atorvastatin 20&#xa0;mg once daily</td>
<td align="center">12 weeks</td>
<td colspan="2" align="left">Jordanian</td>
<td align="center">Type 2 Diabetes Mellitus</td>
<td align="center">Total cholesterol, LDL-C<xref ref-type="table-fn" rid="Tfn2">
<sup>b</sup>
</xref>, HDL-C<xref ref-type="table-fn" rid="Tfn3">
<sup>c</sup>
</xref>, triglycerides</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="Tfn1">
<label>
<sup>a</sup>
</label>
<p>AA, refers to the non-carriers of a CYP7A1 SNP, while AB, and BB, refers to carriers of a CYP7A1 SNP.</p>
</fn>
<fn id="Tfn2">
<label>
<sup>b</sup>
</label>
<p>LDL-C, low-density lipoprotein cholesterol.</p>
</fn>
<fn id="Tfn3">
<label>
<sup>c</sup>
</label>
<p>HDL-C, high-density lipoprotein cholesterol.</p>
</fn>
<fn id="Tfn4">
<label>
<sup>d</sup>
</label>
<p>Demographics were not stratified by genotype; only overall information was present.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s3-2">
<title>3.2 Outcomes of interest</title>
<sec id="s3-2-1">
<title>3.2.1 Treatment effect of statins on total cholesterol</title>
<p>Subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (A allele of rs3808607 and G allele of rs8192875) had a significantly greater reduction in total cholesterol levels as compared with subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs (C allele of rs3808607 and A allele of rs8192875) when administered a statin (overall WMD -0.17, 95% CI -0.29, &#x2212;0.06) (<xref ref-type="fig" rid="F2">Figure 2</xref>). Subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (A allele of rs3808607 and G allele of rs8192875) and had received at least 12 weeks of statin therapy had a significantly greater reduction in total cholesterol levels as compared with subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs (C allele of rs3808607 and A allele of rs8192875) (WMD -0.16, 95% CI -0.27, &#x2212;0.06) (<xref ref-type="fig" rid="F2">Figure 2</xref>). However, there was no significant difference in reduction of total cholesterol levels among those receiving less than 12 weeks of therapy (WMD -0.21, 95% CI -0.44, 0.02) (<xref ref-type="fig" rid="F2">Figure 2</xref>). Similarly, the ethnicity of the subjects did not have a significant impact on the reduction of total cholesterol levels among the Non-White persons (WMD -0.18, 95% CI -0.37, 0.01) and White persons (WMD -0.14, 95% CI -0.30, 0.02), respectively (<xref ref-type="fig" rid="F3">Figure 3</xref>). When stratified by <italic>CYP7A1</italic> SNP, statistically significant reductions in total cholesterol levels of subjects who were non-carriers of a <italic>CYP7A1</italic> SNP were observed among those with <italic>CYP7A1</italic> -204A/C (WMD -0.15, 95% CI -0.29, &#x2212;0.01) and rs8192875 (WMD -0.51, 95% CI -0.79, &#x2212;0.23) but not among those with <italic>CYP7A1</italic> -278A/C (WMD -0.12, 95% CI -0.24, 0.01) (<xref ref-type="fig" rid="F4">Figure 4</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Mean difference in total cholesterol lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a random-effects model, stratified by treatment duration.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g002.tif"/>
</fig>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Mean difference in total cholesterol lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a random-effects model, stratified by ethnicity.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g003.tif"/>
</fig>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Mean difference in total cholesterol lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a random-effects model, stratified by CYP7A1 SNP.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g004.tif"/>
</fig>
</sec>
<sec id="s3-2-2">
<title>3.2.2 Treatment effect of statins on LDL-C</title>
<p>Subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (A allele of rs3808607 and G allele of rs8192875) had a significantly greater reduction in LDL-C levels as compared with subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs (C allele of rs3808607 and A allele of rs8192875) when administered a statin (overall WMD -0.16, 95% CI -0.26, &#x2212;0.05) (<xref ref-type="fig" rid="F5">Figure 5</xref>). Similar to the analyses on total cholesterol, subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (A allele of rs3808607 and G allele of rs8192875) and had received at least 12 weeks of statin therapy had a significantly greater reduction in LDL-C levels as compared to subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs (C allele of rs3808607 and A allele of rs8192875) (WMD -0.15, 95% CI -0.24, &#x2212;0.06) (<xref ref-type="fig" rid="F5">Figure 5</xref>). However, there was no significant difference in reduction of total cholesterol levels among those receiving less than 12 weeks of therapy (WMD -0.18, 95% CI -0.40, 0.04) (<xref ref-type="fig" rid="F5">Figure 5</xref>). When stratified by ethnicity, there was no significant difference in reduction of LDL-C levels among Non-White persons (WMD -0.16, 95% CI -0.35, 0.02) and White persons (WMD -0.12, 95% CI -0.26, 0.02), respectively (<xref ref-type="fig" rid="F6">Figure 6</xref>). When stratified by <italic>CYP7A1</italic> SNP, statistically significant reductions in LDL-C levels of subjects who were non-carriers of a <italic>CYP7A1</italic> SNP were observed among those with <italic>CYP7A1</italic> -204A/C (WMD -0.13, 95% CI -0.24, &#x2212;0.03) and rs8192875 (WMD -0.55, 95% CI -0.83, &#x2212;0.27) but not among those with CYP7A1 -278A/C (WMD -0.08, 95% CI -0.20, 0.04) (<xref ref-type="fig" rid="F7">Figure 7</xref>).</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Mean difference in LDL-C lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a random-effects model, stratified by treatment duration.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g005.tif"/>
</fig>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Mean difference in LDL-C lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a random-effects model, stratified by ethnicity.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g006.tif"/>
</fig>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Mean difference in LDL-C lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a random-effects model, stratified by CYP7A1 SNP.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g007.tif"/>
</fig>
</sec>
<sec id="s3-2-3">
<title>3.2.3 Treatment effect of statins on HDL-C</title>
<p>There was no differential impact of statins on HDL-C levels between subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (A allele of rs3808607 and G allele of rs8192875) and subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs (C allele of rs3808607 and A allele of rs8192875) (WMD 0.01, 95% CI -0.01, 0.03) overall (<xref ref-type="fig" rid="F8">Figure 8</xref>). Similar results were observed when stratified by duration of therapy (less than 12 weeks of therapy: WMD -0.00, 95% CI -0.04, 0.03; at least 12 weeks of therapy: WMD 0.01, 95% CI -0.01, 0.04) (<xref ref-type="fig" rid="F8">Figure 8</xref>), by ethnicity of the subjects (Non-White persons: WMD 0.00, 95% CI -0.03, 0.03; White persons: WMD 0.01, 95% CI -0.02, 0.05) (<xref ref-type="fig" rid="F9">Figure 9</xref>) or by SNP (<italic>CYP7A1</italic> -204A/C: WMD 0.02, 95% CI -0.02, 0.05; <italic>CYP7A1</italic> -278A/C: WMD -0.00, 95% CI -0.04, 0.04; rs8192875: WMD -0.05, 95% CI -0.21, 0.10) (<xref ref-type="fig" rid="F10">Figure 10</xref>).</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>Mean difference in HDL-C improvement response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a fixed-effects model, stratified by treatment duration.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g008.tif"/>
</fig>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>Mean difference in HDL-C improvement response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a fixed-effects model, stratified by ethnicity.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g009.tif"/>
</fig>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption>
<p>Mean difference in HDL-C improvement response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a fixed-effects model, stratified by CYP7A1 SNP.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g010.tif"/>
</fig>
</sec>
<sec id="s3-2-4">
<title>3.2.4 Treatment effect of statins on triglycerides</title>
<p>Similarly, the treatment effect of statins on triglyceride levels was not significantly different between subjects who were non-carriers of a <italic>CYP7A1</italic> SNP (A allele of rs3808607 and G allele of rs8192875) and subjects who borne the variant allele of <italic>CYP7A1</italic> SNPs (C allele of rs3808607 and A allele of rs8192875) (WMD -0.02, 95% CI -0.10, 0.06) overall (<xref ref-type="fig" rid="F11">Figure 11</xref>). There was also no differential impact of statins on triglyceride levels between carriers and non-carriers of <italic>CYP7A1</italic> SNPs when stratified by duration of therapy (less than 12 weeks of therapy: WMD -0.01, 95% CI -0.11, 0.10; at least 12 weeks of therapy: WMD -0.03, 95% CI -0.16, 0.09) (<xref ref-type="fig" rid="F11">Figure 11</xref>), by ethnicity (Non-White persons: WMD -0.01, 95% CI -0.11, 0.10; White persons: WMD -0.03, 95% CI -0.17, 0.11) (<xref ref-type="fig" rid="F12">Figure 12</xref>) or by SNP (<italic>CYP7A1</italic> -204A/C: WMD -0.01, 95% CI -0.11, 0.09; <italic>CYP7A1</italic> -278A/C: WMD -0.03, 95% CI -0.17, 0.11; rs8192875: WMD 0.11, 95% CI -0.43, 0.65) (<xref ref-type="fig" rid="F13">Figure 13</xref>).</p>
<fig id="F11" position="float">
<label>FIGURE 11</label>
<caption>
<p>Mean difference in triglycerides lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a fixed-effects model, stratified by treatment duration.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g011.tif"/>
</fig>
<fig id="F12" position="float">
<label>FIGURE 12</label>
<caption>
<p>Mean difference in triglycerides lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a fixed-effects model, stratified by ethnicity.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g012.tif"/>
</fig>
<fig id="F13" position="float">
<label>FIGURE 13</label>
<caption>
<p>Mean difference in triglycerides lowering response to statins between carriers (AB &#x2b; BB) <italic>versus</italic> non-carriers (AA) of CYP7A1 SNPs using a fixed-effects model, stratified by CYP7A1 SNP.</p>
</caption>
<graphic xlink:href="fgene-14-1199549-g013.tif"/>
</fig>
</sec>
<sec id="s3-2-5">
<title>3.2.5 Sensitivity analyses</title>
<p>When the correlation coefficient was arbitrarily imputed with &#x2018;0&#x2032;and &#x2018;0.8&#x2032;, results remained consistent with the overall trends observed in the primary analyses when a correlation coefficient of &#x2018;0.5&#x2032;was used, demonstrating robustness in the results obtained (<xref ref-type="sec" rid="s11">Supplementary Figures S1-S8</xref>).</p>
</sec>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>4 Discussion</title>
<p>This meta-analysis serves as an update to a previously published review that meta-analysed the results from 3 studies to evaluate the impact of one specific <italic>CYP7A1</italic> SNP, i.e., &#x2212;204 A/C, on the treatment effects of statins on total cholesterol, LDL-C, HDL-C and triglycerides (<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>; <xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B16">Li et al., 2014</xref>). It is an important verification of earlier trends by analysing a more recent and larger data set. To the best of our knowledge, this is the first meta-analysis that pooled relevant studies without restricting to a specific <italic>CYP7A1</italic> SNP. This not only allows us to amass a larger sample size for better statistical power and more precise point estimates, but also provides us with insights on how these <italic>CYP7A1</italic> SNPs can collectively affect lipid outcomes in subjects with or without the variant allele who were administered a statin. Additionally, we expanded our scope of review to look into the effect of treatment duration on the lipid parameters through a stratified analysis, which was not explored in an existing review (<xref ref-type="bibr" rid="B16">Li et al., 2014</xref>).</p>
<p>A total of 6 studies comprising 1,686 subjects for the assessment of total cholesterol, LDL-C and HDL-C, and 1,156 subjects for the assessment of triglycerides were included in this meta-analysis. The study findings showed that subjects who were non-carriers of a <italic>CYP7A1</italic> SNP had a statistically significantly greater reduction in total cholesterol and LDL-C levels as compared to their counterparts who borne the variant allele of <italic>CYP7A1</italic> SNPs when administered a statin, irrespective of the duration of therapy. This implied that patients who carry the variant allele of <italic>CYP7A1</italic> SNPs are at risk of a reduced treatment efficacy when administered an equivalent dose of statin as compared to patients who do not carry the variant allele. Consequentially, these patients might require a higher than necessary statin dose to achieve a similar reduction in total cholesterol and LDL-C levels, and be predisposed to the detrimental side effects of statins such as rhabdomyolysis. (<xref ref-type="bibr" rid="B21">Noyes et al., 2021</xref>). One possible explanation for the observed differences in reduction of total cholesterol and LDL-C levels could be that there is a reduced expression of <italic>CYP7A1</italic> in subjects who borne a variant allele of a <italic>CYP7A1</italic> SNP, which in turn reduces the metabolism of cholesterol to bile acids in the liver thereby leading to accumulation of cholesterol. (<xref ref-type="bibr" rid="B29">Wang et al., 2018</xref>; <xref ref-type="bibr" rid="B5">Chiang and Ferrell, 2020</xref>). A reduced expression of <italic>CYP7A1</italic> may also downregulate LDL-receptor activity leading to reduced catabolism of LDL-C. (<xref ref-type="bibr" rid="B24">Pullinger et al., 2002</xref>). Our study results are also congruent with the previously published meta-analysis where subjects who were non-carriers of a <italic>CYP7A1</italic> SNP were shown to have a greater reduction in total cholesterol (MD -2.56, 95% CI -4.49, &#x2212;0.63, <italic>p</italic> &#x3d; 0.009; n &#x3d; 3) and LDL-C levels (MD -0.33, 95% CI -0.26, 1.41, <italic>p</italic> &#x3d; 0.71; n &#x3d; 3) as compared to their counterparts who borne a variant allele of <italic>CYP7A1</italic> -204 A&#x3e;C (<xref ref-type="bibr" rid="B16">Li et al., 2014</xref>). While the previously published meta-analysis did not establish a significant difference in LDL-C levels between carriers and non-carriers of <italic>CYP7A1</italic> -204A/C when administered a statin, our study reported a significant difference in reduction of LDL-C levels in favour of non-carriers of <italic>CYP7A1</italic> -204A/C.</p>
<p>There is, however, insufficient evidence to suggest that the presence of variant allele of <italic>CYP7A1</italic> SNPs had a significant effect on the reduction of triglycerides levels or improvement in HDL-C levels when subjects were administered a statin. This is in contrast to the previously published meta-analysis where subjects who were non-carriers of a <italic>CYP7A1</italic> SNP had a greater reduction in triglycerides (MD -1.92, 95% CI -7.48, 3.63, <italic>p</italic> &#x3d; 0.64; n &#x3d; 2) and a greater increase in HDL-C levels (MD -0.39, 95% CI -1.13, 0.35, <italic>p</italic> &#x3d; 0.30; n &#x3d; 3) as compared to their counterparts who borne a variant allele of a <italic>CYP7A1</italic> SNP (<xref ref-type="bibr" rid="B16">Li et al., 2014</xref>). One plausible explanation for the lack of a significant effect on HDL-C could be that statins generally have a mild effect on HDL-C, which resulted in minimal change from baseline across all subjects and consequentially, negligible differences between subjects with the homozygous dominant genotype and variant allele genotype. This is not surprising as statins are known to have a modest effect on HDL-C and other pharmacologic agents (e.g., niacin and fibrates) in place of statins are routinely used in practice to improve HDL-C levels (<xref ref-type="bibr" rid="B4">Chapman, 2004</xref>; <xref ref-type="bibr" rid="B26">Schachter, 2004</xref>; <xref ref-type="bibr" rid="B25">RobertOh, 2007</xref>; <xref ref-type="bibr" rid="B2">Amit and Khera, 2013</xref>; <xref ref-type="bibr" rid="B23">Parhofer KG and Laufs, 2019</xref>). Further, <italic>CYP7A1</italic> is not a key enzyme involved in the regulation of triglycerides levels, and therefore perturbation of its bioactivity via genetic polymorphism may not exhibit direct impact on triglycerides metabolism.</p>
<p>We were also able to learn from the study results that a longer treatment duration with statins (at least 12 weeks), at this juncture, has a favourable impact on total cholesterol and LDL-C levels in subjects who were non-carriers of a <italic>CYP7A1</italic> SNP as compared to subjects with the variant allele of the <italic>CYP7A1</italic> SNPs. This also reflects the clinical significance of <italic>CYP7A1</italic> genotype in the long term management of cholesterol, which is a more plausible scenario than as an acute treatment. However, duration of therapy did not have a significant impact on HDL-C and triglycerides levels. Future studies, if available, can be conducted to further elucidate the association between study duration and treatment effect of statins on all four lipid parameters in subjects with or without the variant allele of the <italic>CYP7A1</italic> SNPs.</p>
<p>We highlighted earlier that a previously published meta-analysis focused on one specific <italic>CYP7A1</italic> SNP, i.e., &#x2212;204 A/C, while our meta-analysis was conducted on all relevant studies without restricting to a specific <italic>CYP7A1</italic> SNP. Specifically, the studies included in our meta-analysis looked into the <italic>CYP7A1</italic> SNPs rs3808607 and rs8192875. The <italic>CYP7A1</italic> SNP, rs3808607, is located in the promoter regions, while rs8192875 is located on the fourth exon of the gene and is associated with an amino acid change from aspartic acid to asparagine. It is known that the promoter region of the <italic>CYP7A1</italic> gene contains multiple functional binding sites for liver-enriched transcription factors. (<xref ref-type="bibr" rid="B19">Molowa DT et al., 1992</xref>; <xref ref-type="bibr" rid="B6">Cooper et al., 1997</xref>; <xref ref-type="bibr" rid="B8">Deng et al., 2017</xref>). It is therefore possible that a polymorphism in this region can inhibit the binding of transcription factors thereby decreasing transcription and resulting in a reduced expression of the <italic>CYP7A1</italic> enzyme. It is also suggested in literature that <italic>CYP7A1</italic> expression can possibly be modulated by two interacting regulatory SNPs, specifically an enhancer SNP and promoter SNP, adding weight to our perspective that it is meaningful to examine the pooled impact of <italic>CYP7A1</italic> SNPs on lipid outcomes. (<xref ref-type="bibr" rid="B29">Wang et al., 2018</xref>). As for exonal SNPs, they have the ability to replace the amino acid that encodes a protein and potentially alter the amino acid sequence such that protein structures and functions are impacted. (<xref ref-type="bibr" rid="B8">Deng et al., 2017</xref>). Therefore, by including studies without restricting to a specific <italic>CYP7A1</italic> SNP to the meta-analysis, we not only can increase the sample size for a meaningful statistical analysis but can also better appreciate how these <italic>CYP7A1</italic> SNPs can collectively affect the lipid outcomes in subjects with or without the variant allele of the <italic>CYP7A1</italic> SNPs who were administered a statin.</p>
<p>Nonetheless, our study has the following potential limitations that should be taken into consideration when interpreting the study results. Firstly, we were not able to assess the impact of statin intensity on the lipid outcomes between the two groups of subjects as a majority of the included studies used a moderate-intensity statin. Future studies can be conducted using either low or high doses of statins to allow a more holistic assessment of the impact of a differential statin dose. Secondly, we were also not able to assess the impact of different statins on the lipid outcomes. A total of 5 out of 6 studies ((<xref ref-type="bibr" rid="B14">Kajinami et al., 2005</xref>; <xref ref-type="bibr" rid="B3">Aruna Poduri et al., 2010</xref>; <xref ref-type="bibr" rid="B30">Wei et al., 2011</xref>; <xref ref-type="bibr" rid="B18">Liu et al., 2017</xref>; <xref ref-type="bibr" rid="B1">Abed et al., 2021</xref>) used atorvastatin, while the remaining study ((<xref ref-type="bibr" rid="B12">Hofman MK et al., 2005</xref>)) used pravastatin. Considering different statins have different chemical structures which in turn affect their pharmacokinetic-pharmacodynamic properties and potentially efficacy and safety profiles, conducting future studies with a diverse range of statins will aid in providing more comprehensive and meaningful results (<xref ref-type="bibr" rid="B26">Schachter, 2004</xref>). Future research should be conducted to shed light on the impact of different statins and statin doses on the lipid outcomes in subjects with or without variant allele of <italic>CYP7A1</italic> SNPs. Thirdly, many non-genetic extrinsic factors, such as comorbidities and comedications, can interact with the genotypes resulting in a phenomenon known as phenoconversion. (<xref ref-type="bibr" rid="B28">Shah and Smith, 2015</xref>). Phenoconversion converts genotypic extensive metabolisers (EMs) into phenotypic poor metabolizers (PMs) of drugs, thereby modifying patients&#x2019; clinical response and can significantly impact the interpretation of genotype-focused studies. (<xref ref-type="bibr" rid="B28">Shah and Smith, 2015</xref>). It will be prudent to consider patients&#x2019; clinical features and medical history when considering the impact of <italic>CYP7A1</italic> SNPs on their lipid outcomes with the administration of statins.</p>
</sec>
<sec sec-type="conclusion" id="s5">
<title>5 Conclusion</title>
<p>Our meta-analysis showed that the presence of variant alleles of CYP7A1 SNPs can result in a smaller reduction in total cholesterol and LDL-C levels as compared with individuals who do not carry the variant allele, when administered an equivalent dose of statin. There was, however, no significant impact of variant alleles of <italic>CYP7A1</italic> SNPs on triglycerides and HDL-C levels when subjects were administered an equivalent dose of statin. Taken together, the exact pharmacogenetic relevance of CYP7A1 SNPs to statin therapy awaits wider clinical association and mechanistic investigation.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s6">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7">
<title>Author contributions</title>
<p>ML conceived and designed the systematic review and meta-analysis. ML and JT were responsible for the screening of study titles, reviewing of abstracts and collection of data from the full text of each report. W-PY and HH provided conceptual and technical guidance for all aspects of the review and analysis. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s8">
<title>Funding</title>
<p>This research was funded by the MOE Tier 1 Funding A-0004635-00-00&#x2014;Microplastics.</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11">
<title>Supplementary material</title>
<p>The supplementary material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fgene.2023.1199549/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fgene.2023.1199549/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Table1.DOCX" id="SM1" mimetype="application/DOCX" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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