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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Genet.</journal-id>
<journal-title>Frontiers in Genetics</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Genet.</abbrev-journal-title>
<issn pub-type="epub">1664-8021</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">858653</article-id>
<article-id pub-id-type="doi">10.3389/fgene.2022.858653</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Genetics</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The Causal Relationship Between Blood Lipids and Systemic Lupus Erythematosus Risk: A Bidirectional Two-Sample Mendelian Randomization Study</article-title>
<alt-title alt-title-type="left-running-head">Wang et al.</alt-title>
<alt-title alt-title-type="right-running-head">Blood Lipids and Systemic Lupus Erythematosus Risk</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Wang</surname>
<given-names>Mingzhu</given-names>
</name>
<xref ref-type="fn" rid="FN1">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1642186/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Huang</surname>
<given-names>Shuo</given-names>
</name>
<xref ref-type="fn" rid="FN1">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1492859/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Lin</surname>
<given-names>Xiaoying</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/848817/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wen</surname>
<given-names>Chengping</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/581849/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>He</surname>
<given-names>Zhixing</given-names>
</name>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/611354/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Huang</surname>
<given-names>Lin</given-names>
</name>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/723729/overview"/>
</contrib>
</contrib-group>
<aff>
<institution>College of Basic Medical Science</institution>, <institution>Institute of Basic Research in Clinical Medicine</institution>, <institution>Zhejiang Chinese Medical University</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/625041/overview">Hai-Feng Pan</ext-link>, Anhui Medical University, China</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1653481/overview">Wenchao Li</ext-link>, Shandong Provincial Hospital for Skin Diseases, China</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/708513/overview">Estibaliz Jarauta</ext-link>, University of Zaragoza, Spain</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Zhixing He, <email>hzx2015@zcmu.edu.cn</email>; Lin Huang, <email>huanglin@zcmu.edu.cn</email>
</corresp>
<fn fn-type="equal" id="FN1">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this work</p>
</fn>
<fn fn-type="other">
<p>This article was submitted to Statistical Genetics and Methodology, a section of the journal Frontiers in Genetics</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>13</day>
<month>04</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>13</volume>
<elocation-id>858653</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>01</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>28</day>
<month>03</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Wang, Huang, Lin, Wen, He and Huang.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Wang, Huang, Lin, Wen, He and Huang</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>
<bold>Background:</bold> Although observational studies have demonstrated that blood lipids were associated with systemic lupus erythematosus (SLE), the causality of this association remains elusive as traditional observational studies were prone to confounding and reverse causality biases. Here, this study attempted to reveal the potential causal link between SLE and the levels of four blood lipids (HDL cholesterol, LDL cholesterol, TG, and TC).</p>
<p>
<bold>Methods:</bold> Bidirectional two-sample Mendelian randomization (MR) was employed to explore the unconfounded causal associations between the four blood lipids and SLE. In addition, regression-based Multivariate MR (MVMR) to quantify the possible mediation effects of blood lipids on SLE. After a rigorous evaluation of the quality of studies, the single-nucleotide polymorphisms (SNPs) associated with the four blood lipids were selected from the Global Lipids Genetic Consortium (GLGC) consisted of 188,577 individuals of European ancestry, and the SNPs related to SLE were selected from a large-scale genome-wide association study (GWAS) database named IEU GWAS. Subsequently, MR analyses were conducted with inverse-variance weighted (IVW), weighted median, weighted mode, simple mode, and MR-Egger regression. Sensitivity analyses were performed to verify whether heterogeneity and pleiotropy led to bias in the MR results.</p>
<p>
<bold>Results:</bold> Bidirectional two-sample MR results demonstrated that there was no significant causal association between SLE and the four blood lipids (When setting SLE as outcome, HDL cholesterol and SLE, IVW OR: 1.32, 95% CI: 1.05&#x223c;1.66, <italic>p</italic> &#x3d; 1.78E-02; LDL cholesterol and SLE, IVW OR: 1.26, 95% CI: 1.04&#x223c;1.53, <italic>p</italic> &#x3d; 2.04E-02; TG and SLE, IVW OR: 1.04, 95% CI: 0.71&#x223c;1.51, <italic>p</italic> &#x3d; 8.44E-01; TC and SLE, IVW OR: 1.07, 95% CI: 0.89&#x223c;1.29, <italic>p</italic> &#x3d; 4.42E-01; When setting SLE as exposure, SLE and HDL cholesterol, IVW OR: 1.00, 95% CI: 0.99&#x223c;1.01, <italic>p</italic> &#x3d; 9.51E-01; SLE and LDL cholesterol, IVW OR: 0.99, 95% CI: 0.98&#x223c;1.00, <italic>p</italic> &#x3d; 3.14E-01; SLE and TG, IVW OR: 0.99, 95% CI: 0.98&#x223c;1.00, <italic>p</italic> &#x3d; 1.30E-02; SLE and TC, IVW OR: 0.99, 95% CI: 0.98&#x223c;1.00, <italic>p</italic> &#x3d; 1.56E-01). Our MVMR analysis also provided little evidence that genetically determined lipid traits were significantly associated with the risk of SLE (HDL cholesterol and SLE, <italic>p</italic> &#x3d; 9.63E-02; LDL cholesterol and SLE, <italic>p</italic> &#x3d; 9.63E-02; TG and SLE, <italic>p</italic> &#x3d; 8.44E-01; TC and SLE, <italic>p</italic> &#x3d; 4.42E-01).</p>
<p>
<bold>Conclusion:</bold> In conclusion, these data provide evidence that genetic changes in lipid traits are not significantly associated with SLE risk in the European population.</p>
</abstract>
<kwd-group>
<kwd>systemic lupus erythematosus</kwd>
<kwd>mendelian randomization</kwd>
<kwd>blood lipids</kwd>
<kwd>high density lipoprotein</kwd>
<kwd>low density lipoprotein</kwd>
<kwd>triglycerides</kwd>
<kwd>total cholesterol</kwd>
</kwd-group>
<contract-num rid="cn001">LY21H270006 82074217 81973829</contract-num>
<contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Systemic lupus erythematosus (SLE), a chronic inflammatory autoimmune disease, is characterized by the formation of autoantibodies and deposition of immune complexes. The clinical manifestations of SLE are diverse and involve multiple organs including the skin, kidneys, and joints, and undergo a chronic or recurrence and remission course (<xref ref-type="bibr" rid="B9">Fanouriakis et al., 2021</xref>).</p>
<p>Dyslipidemia is a risk factor for many diseases, such as cardiovascular disease (CVD), metabolic syndrome, and obesity (<xref ref-type="bibr" rid="B18">Palano et al., 2021</xref>; <xref ref-type="bibr" rid="B2">Alsayed et al., 2022</xref>; <xref ref-type="bibr" rid="B26">Subramanian, 2022</xref>). Dyslipidemia is mainly reflected by the abnormalities in low-density lipoprotein (LDL) cholesterol, high-density lipoprotein (HDL) cholesterol, triglycerides (TG), and total cholesterol (TC). In SLE patients, TC, TG, LDL cholesterol, and apolipoprotein B are usually increased, while HDL cholesterol is decreased. The above-mentioned abnormal indices are correlated with SLE disease activity (<xref ref-type="bibr" rid="B27">Szab&#xf3; et al., 2017</xref>). Accumulating evidence indicated that SLE patients are prone to suffer from CVD (<xref ref-type="bibr" rid="B27">Szab&#xf3; et al., 2017</xref>; <xref ref-type="bibr" rid="B28">Tektonidou et al., 2017</xref>). In addition, premature atherosclerosis might contribute to the high mortality of SLE patients.</p>
<p>Previous research had shown that blood lipids might be considered as a new element contributing to subclinical atherosclerosis in SLE patients. LDL in patients with active SLE has a stronger atherogenic effect on endothelial cells compared with the inactive or remission phase (<xref ref-type="bibr" rid="B21">Rodr&#xed;guez-Calvo et al., 2020</xref>). Evidence suggested that high-density lipoprotein might be a new target for reducing the risk of CVD in SLE patients. Elevated levels of oxidized dysfunctional HDL and impaired cholesterol efflux were associated with atherosclerosis in SLE (<xref ref-type="bibr" rid="B22">Ronda et al., 2014</xref>; <xref ref-type="bibr" rid="B25">Smith et al., 2014</xref>). The alterations in composition and antioxidant activity induced by systemic inflammation might reduce the anti-atherosclerotic effect of HDL, leading to increased cardiovascular risk in SLE patients (<xref ref-type="bibr" rid="B10">Ga&#xe1;l et al., 2016</xref>). Besides, impaired cholesterol efflux ability was significantly associated with vascular inflammation, suggesting that treatment to improve HDL function might have a significant cardioprotective effect on SLE (<xref ref-type="bibr" rid="B6">Carlucci et al., 2018</xref>). Moreover, SLE patients might produce anti-lipoprotein lipase during flares, leading to decreased lipolysis and accumulation of TG-rich lipoproteins, which in turn lead to dyslipidemia that could exacerbate lupus (<xref ref-type="bibr" rid="B3">Bazarbashi and Miller, 2022</xref>; <xref ref-type="bibr" rid="B31">Ward et al., 2022</xref>). During the inactive or in remission phase, SLE patients still assume hypertriglyceridemia (<xref ref-type="bibr" rid="B8">Fanlo-Maresma et al., 2020</xref>). However, a research had shown that blood lipids might be considered as a new element contributing to subclinical atherosclerosis in SLE patients, whereas the relationship was not correlated with lipid concentration. Furthermore, a clinical study indicated that cardioprotective and atherogenic lipoproteins were not associated with subclinical atherosclerosis in SLE patients (<xref ref-type="bibr" rid="B13">Kiani et al., 2015</xref>). Therefore, the mechanism leading to premature atherosclerosis and vascular damage in SLE has not been sufficiently elucidated. Whether dyslipidemia affects SLE is still unknown. Consequently, the relationship between the blood lipids and SLE remains to be fully elucidated.</p>
<p>Mendelian randomization (MR) is a genetic epidemiology approach that assesses the casual association between outcomes and exposures (<xref ref-type="bibr" rid="B15">Li et al., 2020</xref>). MR study can get rid of the disturbance from confounders and reverse causation for employing the genetic variants as instrumental variables (IVs). As we all know, genetic variants are randomly assorted in meiosis, while disease occurs after meiosis. This classification method is consistent with the randomization of participants to experimental and control groups in randomized controlled trials. Compared with traditional observational studies, MR analysis can overcome confounding factors, loss of follow-up, time-consuming and other difficulties in conventional studies. Hence, MR analysis is more reliable and convincing.</p>
<p>To explore the potential causal associations between the four blood lipids and the risk of SLE, this study conducted a bidirectional two-sample MR approach by using genome-wide association study (GWAS) data from the Global Lipids Genetic Consortium (GLGC) and IEU GWAS database. The multivariable MR analysis was employed to assess the independent effects of lipids-related traits.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and Methods</title>
<sec id="s2-1">
<title>Genome-Wide Association Study Datasets</title>
<p>The four blood lipids GWAS summary statistics consisted of 188,577 individuals of European ancestry were obtained from the GLGC (<xref ref-type="bibr" rid="B32">Willer et al., 2013</xref>) (<ext-link ext-link-type="uri" xlink:href="http://csg.sph.umich.edu/willer/public/lipids2013/">http://csg.sph.umich.edu/willer/public/lipids2013/</ext-link>). SLE GWASs (5,201 cases and 9,066 controls) were obtained from the IEU GWAS database, a publicly available database (<ext-link ext-link-type="uri" xlink:href="https://gwas.mrcieu.ac.uk/datasets/">https://gwas.mrcieu.ac.uk/datasets/</ext-link>).</p>
</sec>
<sec id="s2-2">
<title>Generation of Genetic Instruments</title>
<p>SNPs associated with each type of blood lipid were selected as IVs (<italic>p</italic> &#x3c; 5 &#xd7; 10<sup>&#x2013;8</sup>). Since smoking and drinking were associated with the risk of SLE, the selected SNPs suggestively related to the two above traits were removed by searching on the PhenoScanner V2 website (<ext-link ext-link-type="uri" xlink:href="http://www.phenoscanner.medschl.cam.ac.uk/">http://www.phenoscanner.medschl.cam.ac.uk/</ext-link>). We clumped the instrumental variables (<italic>r</italic>
<sup>2</sup> &#x3c; 0.01, windows size &#x3d; 5000&#xa0;kb) to remove the SNPs with strong linkage disequilibrium (LD), since these may cause biased results. The palindromic SNPs with a minor allele frequency (MAF) of&#x3c;0.01 were excluded from the above instrument SNPs. Additionally, we selected SNPs related to SLE and applied the same method to explore whether SLE influenced HDL cholesterol, LDL cholesterol, TG, and TC. We calculated the <italic>F</italic> statistic to assess whether there was a weak instrumental bias. If the <italic>F</italic> statistic was greater than 10, it was considered that the association was strong enough so that could avoid weak instrument bias (<xref ref-type="bibr" rid="B5">Burgess et al., 2016</xref>).</p>
</sec>
<sec id="s2-3">
<title>Removal of Horizontal Pleiotropy</title>
<p>MR-Pleiotropy RESidual Sum and Outlier (MR-PRESSO), a method for employing detection and correction of outliers, evaluated the potential horizontal pleiotropy. MR-PRESSO consisted of three components, including MR-PRESSO global test, MR-PRESSO outlier test and MR-PRESSO distortion test (<xref ref-type="bibr" rid="B29">Verbanck et al., 2018</xref>). We applied the MR-PRESSO goal test to detect the overall horizontal pleiotropy. The SNPs with <italic>p</italic> value less than 0.05 were removed as outlier instruments. Repeated the process until the global test was nonsignificant (<italic>p</italic> &#x3e; 0.05). The remaining SNPs were utilized as eligible IVs to conduct the subsequent MR analysis.</p>
</sec>
<sec id="s2-4">
<title>Bidirectional Two-Sample MR Analysis</title>
<p>Bidirectional two-sample MR methods were employed to verify the causative effect between SLE and four types of blood lipids.</p>
<p>Bonferroni-adjusted the results of <italic>p</italic> &#x3c; 0.05/4 &#x3d; 0.0125, which corrected the four lipid traits tested and were considered to be statistically significant. The inverse variance weighted method (IVW), the primary analyses random-effects, similar to a meta-analysis method to combine the causal effects of individual SNPs. Meanwhile, MR-Egger regression, weighted median, weighted mode, and simple mode were also used to validate the results. When blood lipid levels were considered as exposure, the effect was estimated as the odds ratio (OR) and 95% confidence intervals (CIs) of SLE risk for each SD increase in the genetically predicted lipid level. When SLE risk was treated as exposure, the resulting estimates represented the standard deviation (SD) change in lipid levels for per increase in genetic susceptibility to SLE.</p>
</sec>
<sec id="s2-5">
<title>Multivariate MR Analysis</title>
<p>To evaluate the independent influence of the traits related to the four lipids, we performed the multivariable MR analysis. The way to obtain the multivariable MR estimate was utilized an IVW method. <italic>p</italic> &#x3c; 0.05 for this way was considered suggestive for the potential causal association.</p>
</sec>
<sec id="s2-6">
<title>Sensitivity Analysis</title>
<p>To rule out possible violation of the MR assumptions, multiple sensitivity analyses were performed to verify whether heterogeneity and pleiotropy of the genetic instruments have existed. Pleiotropy was the phenomenon that a single locus affects multiple phenotypes. Horizontal pleiotropy might invalidate the results of MR analysis. We used the MR-Egger regression to detect pleiotropy. The intercept term in MR-Egger regression showed no statistical difference compared with 0 (<italic>p</italic> &#x3e; 0.05), indicating the absence of horizontal pleiotropy. Heterogeneity was quantified by Cochran Q statistic. Assuming strong heterogeneity among IVs, we used a random effects model to estimate the effect size of MR. In addition, to avoid horizontal pleiotropy caused by a single SNP, we conducted leave-one-out sensitivity analysis which was performed by sequentially discarding one SNP at a time.</p>
<p>All statistical analyses were performed by using the TwoSampleMR package (version 0.5.6) in R (version 4.0.5) (<xref ref-type="bibr" rid="B11">Gibran et al., 2018</xref>).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<p>When setting SLE as the outcome, our study selected 63 HDL cholesterol, 32 LDL cholesterol, 30&#xa0;TG and 43&#xa0;TC genome-wide significant variants (<italic>p</italic> &#x3c; 5 &#xd7; 10<sup>&#x2013;8</sup>) as the independent IVs (<italic>r</italic>
<sup>2</sup> &#x3c; 0.01). For these IVs, the <italic>F</italic>-statistics &#x3e; 10 indicated that there was little chance of weak instrument variable bias (<xref ref-type="bibr" rid="B5">Burgess et al., 2016</xref>). Detailed information for the four exposure (LDL cholesterol, HDL cholesterol, TG and TC) was listed in <xref ref-type="sec" rid="s11">Supplementary Sheet S1</xref>. Based on the results of MR-PRESSO, the outlier instrumental variables have been removed. Summary statistics for the four blood lipids were shown in <xref ref-type="fig" rid="F1">Figure 1</xref>. None of the selected SNPs were associated with smoking or drinking.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Results of the methods of MR analysis conducted to examine the relationship between blood lipids and SLE risk.</p>
</caption>
<graphic xlink:href="fgene-13-858653-g001.tif"/>
</fig>
<p>The four blood lipids were not causally associated with SLE (For HDL cholesterol, IVW OR 1.32, 95% CI 1.05&#x2013;1.66, <italic>p</italic> &#x3d; 0.018; For LDL cholesterol, IVW OR 1.26, 95%CI 1.04&#x2013;1.53, <italic>p</italic> &#x3d; 0.020; For TG, IVW OR 1.04, 95% CI 0.71&#x2013;1.51, <italic>p</italic> &#x3d; 0.844; For TC, IVW OR 1.07, 95% CI 0.89&#x2013;1.29, <italic>p</italic> &#x3d; 0.442) (<xref ref-type="fig" rid="F1">Figures 1</xref>, <xref ref-type="fig" rid="F2">2</xref> and <xref ref-type="sec" rid="s11">Supplementary Figure S1</xref>
<bold>)</bold>.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Scatter plots for MR analysis of the causal effect of blood lipids on SLE risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
<graphic xlink:href="fgene-13-858653-g002.tif"/>
</fig>
<p>Next, we conducted Cochran Q statistic to detect heterogeneity. There were significant heterogeneities in LDL cholesterol (I<sup>2</sup> &#x3d; 0.410, <italic>p</italic> &#x3c; 0.05), HDL cholesterol (I<sup>2</sup> &#x3d; 0.241, <italic>p</italic> &#x3c; 0.05), TG (I<sup>2</sup> &#x3d; 0.510, <italic>p</italic> &#x3c; 0.05) and TC (I<sup>2</sup> &#x3d; 0.424, <italic>p</italic> &#x3c; 0.05) (<xref ref-type="table" rid="T1">Table 1</xref>). We used a random effects model to estimate the MR effect size. The MR-Egger method suggested that there was no evidence of horizontal pleiotropy in LDL cholesterol (egger intercept &#x3d; &#x2212;0.003, <italic>p</italic> &#x3d; 0.767), HDL cholesterol (egger intercept &#x3d; 0.015, <italic>p</italic> &#x3d; 0.253), TG (egger intercept &#x3d; 0.017, <italic>p</italic> &#x3d; 0.144) and TC (egger intercept &#x3d; &#x2212;0.022, <italic>p</italic> &#x3d; 0.297). The plots of the leave-one-out analysis revealed that no single SNP was driving the causal link between blood lipids and SLE (<xref ref-type="sec" rid="s11">Supplementary Figure S2</xref>). The funnel plots were shown in <xref ref-type="sec" rid="s11">Supplementary Figure S3</xref>.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Heterogeneity and horizontal pleiotropy analyses between SLE and blood lipids.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th colspan="1" align="left">Exposure traits</th>
<th colspan="3" align="center">Heterogeneity</th>
<th colspan="2" align="center">Horizontal pleiotropy</th>
</tr>
<tr>
<th rowspan="2" align="left"/>
<th colspan="3" align="center">Cochran Q statistic</th>
<th colspan="2" align="center">MR-Egger</th>
</tr>
<tr>
<th align="center">IVW Q</th>
<th align="center">IVW <italic>I</italic>
<sup>
<italic>2</italic>
</sup>
</th>
<th align="center">IVW <italic>p</italic>
</th>
<th align="center">egger intercept</th>
<th align="center">
<italic>p</italic>
</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Low-density lipoprotein cholesterol</td>
<td align="char" char=".">126.96358</td>
<td align="char" char=".">0.47229</td>
<td align="char" char=".">0.00001</td>
<td align="char" char=".">0.00519</td>
<td align="char" char=".">0.68388</td>
</tr>
<tr>
<td align="left">High-density lipoprotein cholesterol</td>
<td align="char" char=".">57.68903</td>
<td align="char" char=".">0.41063</td>
<td align="char" char=".">0.00681</td>
<td align="char" char=".">0.00300</td>
<td align="char" char=".">0.75304</td>
</tr>
<tr>
<td align="left">Triglycerides</td>
<td align="char" char=".">59.15360</td>
<td align="char" char=".">0.50975</td>
<td align="char" char=".">0.00079</td>
<td align="char" char=".">0.01683</td>
<td align="char" char=".">0.14399</td>
</tr>
<tr>
<td align="left">Total cholesterol</td>
<td align="char" char=".">72.93434</td>
<td align="char" char=".">0.42414</td>
<td align="char" char=".">0.00216</td>
<td align="char" char=".">&#x2212;0.02234</td>
<td align="char" char=".">0.29687</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>When setting SLE as exposure, we incorporated 20, 19, 17, and 15 independent and significant IVs, respectively to clarify the causal effects of SLE on HDL cholesterol, LDL cholesterol, TC and TG (<xref ref-type="sec" rid="s11">Supplementary Sheet S2</xref>; <xref ref-type="fig" rid="F3">Figure 3</xref>
<bold>)</bold>. There was no evidence suggesting that an increased risk of SLE with changes in the risk of LDL cholesterol, HDL cholesterol, TC or TG based on the different MR methods <bold>(</bold>
<xref ref-type="sec" rid="s11">Supplementary Figures S4, S5</xref>
<bold>)</bold>. We used MR-Egger regression to assess horizontal pleiotropy, and the results demonstrated that pleiotropy was unlikely to bias the causal relationship of HDL cholesterol (<italic>p &#x3d;</italic> 0.253), LDL cholesterol (<italic>p</italic> &#x3d; 0.766), TC(<italic>p</italic> &#x3d; 0.144) and TG (<italic>p</italic> &#x3d; 0.297) with SLE (<xref ref-type="table" rid="T2">Table 2</xref>). No horizontal pleiotropy was detected in this part.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Results of the methods of MR analysis conducted to examine the relationship between SLE and blood lipids risk.</p>
</caption>
<graphic xlink:href="fgene-13-858653-g003.tif"/>
</fig>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Heterogeneity and horizontal pleiotropy analyses between SLE and blood lipids.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th rowspan="3" align="left">Outcome</th>
<th colspan="3" align="center">Heterogeneity</th>
<th colspan="2" align="center">Horizontal pleiotropy</th>
</tr>
<tr>
<th colspan="3" align="center">Cochran Q statistic</th>
<th colspan="2" align="center">MR-Egger</th>
</tr>
<tr>
<th align="center">IVW Q</th>
<th align="center">IVW <italic>I</italic>
<sup>2</sup>
</th>
<th align="center">IVW <italic>P</italic>
</th>
<th align="center">egger intercept</th>
<th align="center">
<italic>P</italic>
</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">High-density lipoprotein cholesterol</td>
<td align="char" char=".">34.84156</td>
<td align="char" char=".">0.31716</td>
<td align="char" char=".">0.04737</td>
<td align="char" char=".">0.01523</td>
<td align="char" char=".">0.25299</td>
</tr>
<tr>
<td align="left">Low-density lipoprotein cholesterol</td>
<td align="char" char=".">57.68903</td>
<td align="char" char=".">0.39727</td>
<td align="char" char=".">0.00681</td>
<td align="char" char=".">&#x2212;0.00289</td>
<td align="char" char=".">0.76609</td>
</tr>
<tr>
<td align="left">Triglycerides</td>
<td align="char" char=".">59.15360</td>
<td align="char" char=".">0.04511</td>
<td align="char" char=".">0.00079</td>
<td align="char" char=".">0.01683</td>
<td align="char" char=".">0.14399</td>
</tr>
<tr>
<td align="left">Total cholesterol</td>
<td align="char" char=".">72.93434</td>
<td align="char" char=".">&#x2212;0.33610</td>
<td align="char" char=".">0.00216</td>
<td align="char" char=".">&#x2212;0.02234</td>
<td align="char" char=".">0.29687</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Cochran Q-value indicated that there was heterogeneity between the IVs extracted from HDL cholesterol, LDL cholesterol, TC and TG determined with the MR-Egger methods (For HDL cholesterol, <italic>I</italic>
<sup>
<italic>2</italic>
</sup> &#x3d; 0.317, <italic>p</italic> &#x3d; 0.047; For LDL cholesterol, <italic>I</italic>
<sup>
<italic>2</italic>
</sup> &#x3d; 0.397, <italic>p</italic> &#x3d; 0.007; For TG, <italic>I</italic>
<sup>
<italic>2</italic>
</sup> &#x3d; 0.045, <italic>p</italic> &#x3d; 0.001; For TC, <italic>I</italic>
<sup>
<italic>2</italic>
</sup> &#x3d; &#x2212;0.336, <italic>p</italic> &#x3d; 0.002), so we used a random effects model to estimate the MR effect size (<xref ref-type="fig" rid="F3">Figure 3</xref>). Due to a single SNP based on the principle that dropping one SNP at a time sequentially, leave-one-out analysis that can avoid horizontal pleiotropy was performed (<xref ref-type="sec" rid="s11">Supplementary Figure S6</xref>). Forest plots and funnel plots are presented in <xref ref-type="sec" rid="s11">Supplementary Figures S5, S7</xref>.</p>
<p>Given correlation among lipid-related characteristics, we conducted the multivariable MR analysis. The result indicated that there was no causal relationship between lipids and SLE (<xref ref-type="table" rid="T3">Table 3</xref>; <xref ref-type="sec" rid="s11">Supplementary Sheet S3</xref>). With mutual adjustment for HDL cholesterol, LDL cholesterol, TG and TC, the association between LDL cholesterol and risk of SLE was no-significance (OR 1.51, 95% CI 0.48&#x2013;4.69, <italic>p</italic> &#x3d; 0.48). Also, the result showed that genetically predicted HDL cholesterol, TG and TC were not associated with risk of SLE (<xref ref-type="table" rid="T3">Table 3</xref>).</p>
<table-wrap id="T3" position="float">
<label>TABLE 3</label>
<caption>
<p>Multivariable MR analysis between SLE and blood lipids.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Exposure</th>
<th align="center">Outcome</th>
<th align="center">No. of SNPs</th>
<th align="center">Beta</th>
<th align="center">SE</th>
<th align="center">
<italic>p</italic>-vaule</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">HDL cholesterol</td>
<td rowspan="4" align="center">Systemic lupus erythematosus</td>
<td align="center">75</td>
<td align="char" char=".">0.410</td>
<td align="char" char=".">0.579</td>
<td align="char" char=".">0.478</td>
</tr>
<tr>
<td align="left">LDL cholesterol</td>
<td align="center">64</td>
<td align="char" char=".">0.792</td>
<td align="char" char=".">1.102</td>
<td align="char" char=".">0.472</td>
</tr>
<tr>
<td align="left">Total cholesterol</td>
<td align="center">72</td>
<td align="char" char=".">&#x2212;1.071</td>
<td align="char" char=".">1.319</td>
<td align="char" char=".">0.417</td>
</tr>
<tr>
<td align="left">Triglycerides</td>
<td align="center">38</td>
<td align="char" char=".">0.410</td>
<td align="char" char=".">0.527</td>
<td align="char" char=".">0.436</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>It is well known that SLE patients had a high risk of suffering from CVD and atherosclerosis (AS) (<xref ref-type="bibr" rid="B30">Wang et al., 2022</xref>). Dyslipidemia was one of the typical hallmarks of AS and CVD, characterized by the elevated LDL cholesterol, TG and TC, and reduced HDL cholesterol. Dyslipidemia was observed at early diagnosis of lupus and correlated with the disease activity of SLE (<xref ref-type="bibr" rid="B27">Szabo et al., 2017</xref>; <xref ref-type="bibr" rid="B20">Robinson et al., 2022</xref>). This study aimed to illustrate the causal relationship between SLE and blood lipids (LDL cholesterol, HDL cholesterol, TG and TC) using two sample and multivariable MR analysis. However, no causal association was demonstrated between HDL cholesterol, LDL cholesterol, TG and TC and SLE after eliminating the complex confounding factors. Our MVMR analysis provided similar results, with no genetic evidence that lipid traits were significantly associated with SLE risk. Therefore, the summary of the above results found no causal relationship between dyslipidemia and SLE, excluding complex confounding factors. This demonstrated that these four lipids do not contribute to the risk of SLE at the genetic level excluding other factors.</p>
<p>In fact, the possible role of genetic characteristics in dyslipidemia and CVD has not been well defined in SLE patients. Recently, previous studies have indicated that the susceptibility of SLE patients to atherosclerosis and CVD was not entirely attributable to traditional risk factors, and chronic inflammatory state exists in patients with high disease activity and long disease course, which enlarge the incidence of cardiovascular events (<xref ref-type="bibr" rid="B24">Skaggs et al., 2012</xref>; <xref ref-type="bibr" rid="B12">Arvind et al., 2016</xref>). Inflammation and enhanced oxidative stress have been shown to be basic risk factors for the onset and progression of CVD (<xref ref-type="bibr" rid="B17">Mirmiran et al., 2022</xref>). The increase in CVD risk in SLE patients is not judged by traditional risk factors alone, and chronic inflammation may also play a role, such as elevated triglyceride-rich lipoprotein leading to low-grade inflammation (<xref ref-type="bibr" rid="B3">Bazarbashi and Miller, 2022</xref>); changes in composition and antioxidant activity reducing the anti-atherosclerotic effect of HDL which lead to increased cardiovascular risk in SLE patients (<xref ref-type="bibr" rid="B10">Gaal et al., 2016</xref>).</p>
<p>Consistent with this, a new clinical study indicated that anti-dsDNA positively might directly influence the development of CVD in SLE patients by modulating inflammation and clot-related molecules and regulating partially induced endothelial cell activation. In addition, inflammatory cascades may play an important role in the susceptibility of rheumatic diseases to cardiovascular disease. The mechanism may be elevated levels of oxidized lipids, such as oxidized LDL and pro-inflammatory HDL, leading to an inflammatory cascade that eventually leads to plaque formation (<xref ref-type="bibr" rid="B23">Sagar et al., 2020</xref>). Furthermore, a clinical study demonstrated that LDL in patients with active SLE has a stronger atherogenic effect on endothelial cells in the inactive or in remission phase compared with LDL in the same patients. It indicated that the relationship between SLE and lipids may also be related to the stage of SLE.</p>
<p>In addition, the parameters related to increased cardiovascular risk were associated with the presence and titer of anti-dsDNA antibodies, and the relationship was independent of the other cardiovascular risk factors (<xref ref-type="bibr" rid="B19">Pati&#xf1;o-Trives et al., 2021</xref>). Certainly, glucocorticoid exposure may also play an important role in CVDs, for example, the high-dose of prednisolone promote carotid intima-media thickness progression in SLE (<xref ref-type="bibr" rid="B1">Ajeganova et al., 2020</xref>; <xref ref-type="bibr" rid="B14">Lengton et al., 2021</xref>). It is still noteworthy that the use of glucocorticoid in SLE should be deserved attention due to the side effects of glucocorticoid in the cardiovascular risk.</p>
<p>Some limitations of our analysis need to be considered. Firstly, the summary-level statistics did not allow us to conduct a hierarchical analysis of covariates adjusted by the original GWAS. Secondly, in our MR methods, linear regression models were performed to assume the relationship between blood lipids and SLE, because the summary statistics did not allow us to explore the non-linear association between blood lipids and SLE. While linearity could be viewed as a first-order approximation of any nonlinear relationship, the simple assumption of linearity is not always justified in practice (<xref ref-type="bibr" rid="B4">Thompson et al., 2014</xref>). Another notable weakness was that the findings may not be applicable to non-European ancestry populations, as the genetic IVs were extracted from GWAS database of European ancestry participants.</p>
</sec>
<sec sec-type="conclusion" id="s5">
<title>Conclusion</title>
<p>Taken together, the study suggested none of the lipid traits was associated with SLE risks. More work is needed to confirm the potential link between lipid properties and SLE risk.</p>
</sec>
</body>
<back>
<sec id="s6">
<title>Data Availability Statement</title>
<p>Publicly available datasets were analyzed in this study. This data can be found here: <ext-link ext-link-type="uri" xlink:href="http://csg.sph.umich.edu/willer/public/lipids2013/">http://csg.sph.umich.edu/willer/public/lipids2013/</ext-link> <ext-link ext-link-type="uri" xlink:href="https://gwas.mrcieu.ac.uk/datasets/">https://gwas.mrcieu.ac.uk/datasets/.</ext-link>
</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>LH and ZH conceived the idea and contributed to design the research. MW, SH, and XL assisted in performing the computations. MW and CW interpretation the data and drafted the manuscript. All authors contributed to the article and approved the final manuscript.</p>
</sec>
<sec id="s8">
<title>Funding</title>
<p>This work was supported by the Natural Science Foundation of Zhejiang Province (No. LY21H270006) and the National Natural Science Foundation of China (Nos 82074217 and 81973829).</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>We thank the investigators for sharing these data.</p>
</ack>
<sec id="s11">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fgene.2022.858653/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fgene.2022.858653/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material>
<label>Supplementary Figure S1</label>
<caption>
<p>Forest plots of the causal effect of blood lipids on SLE risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Figure S2</label>
<caption>
<p>MR leave&#x2212;one&#x2212;out sensitivity analysis for blood lipids on SLE risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Figure S3</label>
<caption>
<p>Funnel plots of the causal effect of blood lipids on SLE risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Figure S4</label>
<caption>
<p>Scatter plots of the causal effect of SLE on bloods risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Figure S5</label>
<caption>
<p>Forest plots of the causal effect of SLE lipids on bloods risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Figure S6</label>
<caption>
<p>MR leave&#x2212;one&#x2212;out sensitivity analysis for SLE on blood lipids risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. <bold>(D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Figure S7</label>
<caption>
<p>Funnel plots of the causal effect of SLE on blood lipids risk. <bold>(A)</bold> HDL cholesterol. <bold>(B)</bold> LDL cholesterol. <bold>(C)</bold> TC. (<bold>D)</bold> TG.</p>
</caption>
</supplementary-material>
<supplementary-material xlink:href="Image5.pdf" id="SM1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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</sec>
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