<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article article-type="research-article" dtd-version="2.3" xml:lang="EN" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Genet.</journal-id>
<journal-title>Frontiers in Genetics</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Genet.</abbrev-journal-title>
<issn pub-type="epub">1664-8021</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">754198</article-id>
<article-id pub-id-type="doi">10.3389/fgene.2021.754198</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Genetics</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Early Life Stress Alters Gene Expression and Cytoarchitecture in the Prefrontal Cortex Leading to Social Impairment and Increased Anxiety</article-title>
<alt-title alt-title-type="left-running-head">Usui et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">ELS on Sociality and Anxiety</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Usui</surname>
<given-names>Noriyoshi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1198989/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ono</surname>
<given-names>Yuta</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Aramaki</surname>
<given-names>Ryoko</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Berto</surname>
<given-names>Stefano</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/289539/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Konopka</surname>
<given-names>Genevieve</given-names>
</name>
<xref ref-type="aff" rid="aff7">
<sup>7</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/36209/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Matsuzaki</surname>
<given-names>Hideo</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<xref ref-type="aff" rid="aff8">
<sup>8</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1284202/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shimada</surname>
<given-names>Shoichi</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<label>
<sup>1</sup>
</label>Department of Neuroscience and Cell Biology, Graduate School of Medicine, Osaka University, <addr-line>Suita</addr-line>, <country>Japan</country>
</aff>
<aff id="aff2">
<label>
<sup>2</sup>
</label>United Graduate School of Child Development, Osaka University, <addr-line>Suita</addr-line>, <country>Japan</country>
</aff>
<aff id="aff3">
<label>
<sup>3</sup>
</label>Global Center for Medical Engineering and Informatics, Osaka University, <addr-line>Suita</addr-line>, <country>Japan</country>
</aff>
<aff id="aff4">
<label>
<sup>4</sup>
</label>Addiction Research Unit, Osaka Psychiatric Research Center, Osaka Psychiatric Medical Center, <addr-line>Osaka</addr-line>, <country>Japan</country>
</aff>
<aff id="aff5">
<label>
<sup>5</sup>
</label>Division of Development of Mental Functions, Research Center for Child Mental Development, University of Fukui, <addr-line>Fukui</addr-line>, <country>Japan</country>
</aff>
<aff id="aff6">
<label>
<sup>6</sup>
</label>Department of Neuroscience, Medical University of South Carolina, <addr-line>Charleston</addr-line>, <addr-line>SC</addr-line>, <country>United&#x20;States</country>
</aff>
<aff id="aff7">
<label>
<sup>7</sup>
</label>Department of Neuroscience, University of Texas Southwestern Medical Center, <addr-line>Dallas</addr-line>, <addr-line>TX</addr-line>, <country>United&#x20;States</country>
</aff>
<aff id="aff8">
<label>
<sup>8</sup>
</label>Life Science Innovation Center, University of Fukui, <addr-line>Fukui</addr-line>, <country>Japan</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/40063/overview">Silvia Pellegrini</ext-link>, University of Pisa, Italy</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/16426/overview">Bryan Kolb</ext-link>, University of Lethbridge, Canada</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/72363/overview">David G. Ashbrook</ext-link>, University of Tennessee Health Science Center (UTHSC), United&#x20;States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Noriyoshi Usui, <email>usui@anat1.med.osaka-u.ac.jp</email>
</corresp>
<fn fn-type="equal" id="fn1">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this&#x20;work</p>
</fn>
<fn fn-type="other">
<p>This article was submitted to Neurogenomics, a section of the journal Frontiers in Genetics</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>02</day>
<month>11</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>12</volume>
<elocation-id>754198</elocation-id>
<history>
<date date-type="received">
<day>06</day>
<month>08</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>11</day>
<month>10</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Usui, Ono, Aramaki, Berto, Konopka, Matsuzaki and Shimada.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Usui, Ono, Aramaki, Berto, Konopka, Matsuzaki and Shimada</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Early life stress (ELS), such as abuse, neglect, and maltreatment, exhibits a strong impact on the brain and mental development of children. However, it is not fully understood how ELS affects social behaviors and social-associated behaviors as well as developing prefrontal cortex (PFC). In this study, we performed social isolation on weaned pre-adolescent mice until adolescence and investigated these behaviors and PFC characteristics in adolescent mice. We found the ELS induced social impairments in social novelty, social interaction, and social preference in adolescent mice. We also observed increases of anxiety-like behaviors in ELS mice. In histological analysis, we found a reduced number of neurons and an increased number of microglia in the PFC of ELS mice. To identify the gene associated with behavioral and histological features, we analyzed transcriptome in the PFC of ELS mice and identified 15 differentially expressed genes involved in transcriptional regulation, stress, and synaptic signaling. Our study demonstrates that ELS influences social behaviors, anxiety-like behaviors through cytoarchitectural and transcriptomic alterations in the PFC of adolescent&#x20;mice.</p>
</abstract>
<kwd-group>
<kwd>early life stress</kwd>
<kwd>social isolation</kwd>
<kwd>social behavior</kwd>
<kwd>anxiety</kwd>
<kwd>prefrontal cortex</kwd>
<kwd>transcriptome</kwd>
</kwd-group>
<contract-num rid="cn001">18K14814 20K06872</contract-num>
<contract-sponsor id="cn001">Japan Society for the Promotion of Science<named-content content-type="fundref-id">10.13039/501100001691</named-content>
</contract-sponsor>
<contract-sponsor id="cn002">Takeda Science Foundation<named-content content-type="fundref-id">10.13039/100007449</named-content>
</contract-sponsor>
<contract-sponsor id="cn003">SENSHIN Medical Research Foundation<named-content content-type="fundref-id">10.13039/501100008667</named-content>
</contract-sponsor>
<contract-sponsor id="cn004">Osaka Medical Research Foundation for Intractable Diseases<named-content content-type="fundref-id">10.13039/501100008665</named-content>
</contract-sponsor>
<contract-sponsor id="cn005">Uehara Memorial Foundation<named-content content-type="fundref-id">10.13039/100008732</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>The environment is a crucial factor for providing optimal growth and health conditions for children, including social, cognitive, or immune system-related aspects (<xref ref-type="bibr" rid="B17">Ferguson et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B46">Sonuga-Barke et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B11">Consiglio and Brodin, 2020</xref>; <xref ref-type="bibr" rid="B27">Mackes et&#x20;al., 2020</xref>). Particularly, childhood environments have great impacts on the brain architecture, synaptic plasticity, and mental development (<xref ref-type="bibr" rid="B52">Takesian and Hensch, 2013</xref>; <xref ref-type="bibr" rid="B31">Miguel et&#x20;al., 2019</xref>).</p>
<p>For example, adverse childhood environments and experiences such as abuse, neglect, and maltreatment have profound effects on the brain and mental development, and constitutes major risk factors for brain structural changes and adult psychopathology (<xref ref-type="bibr" rid="B54">Teicher et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B21">Jaffee, 2017</xref>). Human brain imaging studies have reported that maltreatment reduces specific brain region volumes such as anterior cingulate cortex, ventromedial and dorsomedial PFC, hippocampus, and striatum, and these brain regions are highly involved in emotional control and the reward system (<xref ref-type="bibr" rid="B9">Chugani et&#x20;al., 2001</xref>; <xref ref-type="bibr" rid="B10">Cohen et&#x20;al., 2006</xref>; <xref ref-type="bibr" rid="B16">Edmiston et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B13">Dannlowski et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B53">Teicher et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B22">Kelly et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B54">Teicher et&#x20;al., 2016</xref>). Importantly, specific brain regions are affected by specific types of abuse, neglect or maltreatment. Exposure to harsh corporal punishment caused a reduced gray matter volume in the prefrontal cortex of young adults (<xref ref-type="bibr" rid="B57">Tomoda et&#x20;al., 2009</xref>). In addition, exposure to parental verbal aggression in childhood reduced fractional anisotropy in the arcuate fasciculus, and affected the development of the auditory association cortex involved in language processing (<xref ref-type="bibr" rid="B56">Tomoda et&#x20;al., 2011</xref>). The child brain development has plasticity, and the effects of the childhood environments and experiences lead to structural and functional changes in the brain, as well as behavioral alterations.</p>
<p>Social isolation, social defeat stress, and electric shock are widely used as animal models to reproduce ELS and traumatic experiences in childhood (<xref ref-type="bibr" rid="B44">Sch&#xf6;ner et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B5">Aspesi and Pinna, 2019</xref>; <xref ref-type="bibr" rid="B38">Pinna, 2019</xref>). A previous study of animal models reported that socially isolated mice during postnatal days (P) 21&#x2013;35 displayed reduced sociality, working memory, and myelination in the PFC (<xref ref-type="bibr" rid="B28">Makinodan et&#x20;al., 2012</xref>). In addition, reduced synapses and endogenous excitatory subtypes of the layer 5 pyramidal neurons were reported in the PFC of mice socially isolated for the same period (<xref ref-type="bibr" rid="B65">Yamamuro et&#x20;al., 2018</xref>). We have also reported that social isolation during P21&#x2013;53 induced the alteration of gut microbiota in mice (<xref ref-type="bibr" rid="B61">Usui et&#x20;al., 2021b</xref>). These studies indicate that social isolation causes a lack of social experience and isolation stress, resulting in serious impacts on both PFC architecture and physical health. However, it is not fully understood how ELS affects various social behaviors and its-associated behaviors as well as transcriptome in the PFC of stressed individuals.</p>
<p>To address these questions, we performed social isolation on weaned pre-adolescent mice until adolescence for analyzing the impacts of ELS. In this study, we investigated various social behaviors (interaction, novelty, and preference), anxiety-like behaviors as well as cytoarchitecture and gene expressions by RNA sequencing (RNA-seq) of the PFC in adolescent ELS&#x20;mice.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and Methods</title>
<sec id="s2-1">
<title>Mice</title>
<p>Wild-type C57BL/6N (Japan SLC Inc., Shizuoka, Japan) mouse was used. Mice were housed in the barrier facilities of University of Fukui under 50% humidity and a 12:12&#xa0;h light:dark cycle (8:00 to 20:00) and given free access to water and food. Social isolation-induced ELS was performed as described previously (<xref ref-type="bibr" rid="B61">Usui et&#x20;al., 2021b</xref>). Briefly, the used experimental and control mice came from the litters of the same mother. For ELS (<italic>via</italic> social isolation), male mice were individually housed using a filter cap (&#x23;CL-4150, CLEA Japan, Inc., Tokyo, Japan) immediately after the weaning at P21 until P50. For controls, 4 male mice were co-housed in the same cage without filter cap. Mice behaviors were assessed from P50 and kept in each housing condition until dissection at P67. A total of 39 mice were used in this study, using littermates that gave birth to 6 or more at a time. The number of mice used in each experiment is shown in corresponding figure legend. All procedures were performed according to the ARRIVE guidelines and relevant official guidelines under the approval (&#x23;27-010) of the Animal Research Committee of the University of Fukui. All behavioral tests were performed between 10am and 5pm. Experimenters blind to housing information performed all behavioral&#x20;tests.</p>
</sec>
<sec id="s2-2">
<title>Three-Chamber Social Interaction Test</title>
<p>Three-chamber social interaction test was performed as described previously (<xref ref-type="bibr" rid="B61">Usui et&#x20;al., 2021b</xref>). Sociability and social novelty behaviors were assessed using a three-chamber box (W610 &#xd7; D400 &#xd7; H220&#xa0;mm) with an infrared video camera system (O&#x2019;Hara &#x26; Co., Ltd, Tokyo, Japan) at P53 after collecting fecal samples. For the first trial, empty wired cages were placed into both chambers for habituation. For the second trial, a stranger male mouse (mouse A) was placed into a wired cage of the right chamber to examine the sociability. For the third trial, mouse A was kept in the same wired cage as a familiar mouse, and a novel stranger male mouse (mouse B) was placed into a wired cage of the left chamber to examine the social novelty. Each trial was examined for 5&#xa0;min after which the interactions with the targets were scored using an infrared video camera system (O&#x2019;Hara &#x26; Co., Ltd, Tokyo, Japan).</p>
</sec>
<sec id="s2-3">
<title>Social Interaction Test</title>
<p>Two mice were placed in the diagonal corners of a novel chamber (W480 &#xd7; D480 &#xd7; H330&#xa0;mm) and allowed to examine the social interactions for 10&#xa0;min. Time spent in social interaction was measured and tracked by digital counters with infrared sensors (SCANET MV-40, MELQUEST Ltd., Toyama, Japan).</p>
</sec>
<sec id="s2-4">
<title>Social Preference Test</title>
<p>Mice were placed in one of the corners of a novel chamber (W480 &#xd7; D480 &#xd7; H330&#xa0;mm) and allowed to examine the social preference for 10&#xa0;min. A stranger male mouse was placed into a wired cage (80 &#xd7; 80&#xa0;mm) of the center of arena to examine the social preference. Time spent around the wired cage area (250 &#xd7; 250&#xa0;mm) and locomotor activity were measured and tracked by digital counters with infrared sensors (SCANET MV-40, MELQUEST Ltd., Toyama, Japan).</p>
</sec>
<sec id="s2-5">
<title>Light-Dark Box Test</title>
<p>Mice were placed in the dark room of a light -dark box (W300 &#xd7; D150 &#xd7; H150&#xa0;mm) and allowed to freely explore for 10&#xa0;min. Time spent in each box (W150 &#xd7; D150 &#xd7; H150&#xa0;mm), transition, and locomotor activity were measured and tracked by digital counters with infrared sensors (SCANET MV-40, MELQUEST Ltd., Toyama, Japan).</p>
</sec>
<sec id="s2-6">
<title>Open Field Test</title>
<p>Mice were placed in one of the corners of a novel chamber (W480 &#xd7; D480 &#xd7; H330&#xa0;mm) and allowed to freely explore for 120&#xa0;min. Time spent in the center of arena (80 &#xd7; 80&#xa0;mm) and locomotor activity were measured and tracked by digital counters with infrared sensors (SCANET MV-40, MELQUEST Ltd., Toyama, Japan).</p>
</sec>
<sec id="s2-7">
<title>Marble-Burying Test</title>
<p>Marble-burying test was performed as described previously (<xref ref-type="bibr" rid="B59">Usui et&#x20;al., 2021a</xref>). Mice were placed in the corner of a novel home cage evenly placed eighteen marbles and allowed to freely explore for 20&#xa0;min. After 20&#xa0;min, the number of marbles buried was recorded. A marble was defined as buried when less than one-third of the marble was visible.</p>
</sec>
<sec id="s2-8">
<title>Immunohistochemistry</title>
<p>Immunohistochemistry was performed as described previously (<xref ref-type="bibr" rid="B59">Usui et&#x20;al., 2021a</xref>). The mouse brain was fixed with 4% PFA in PBS overnight at 4&#xb0;C, cryoprotected in 30% sucrose in PBS overnight at 4&#xb0;C, and then embedded in Tissue-Tek O.C.T. Compound (&#x23;4583; Sakura Finetek Japan Co., Ltd., Osaka, Japan) for cryosectioning. Cryosections (20&#xa0;&#x3bc;m thick) were placed in PBS and then permeabilized in PBS-T for 30&#xa0;min at room temperature. Blocking was performed using 10% goat serum and 1% BSA in PBS-T for 1&#xa0;h at room temperature. Sections were stained with the following established primary antibodies overnight at 4&#xb0;C: mouse monoclonal anti-NeuN (1:200, &#x23;MAB377, Millipore, Billerica, MA), rabbit polyclonal anti-Iba1 (1:1000, &#x23;019-19741, FUJIFILM Wako pure chemical corporation, Osaka, Japan). Sections were washed three times with PBS-T, incubated with species-specific antibodies conjugated to Alexa Fluor 488 (1:2,000; Invitrogen, Carlsbad, CA, United&#x20;States) for 1&#xa0;h at room temperature, and then washed 3&#x20;times with PBS-T. Cover glasses were mounted with Fluoromount/Plus (&#x23;K048; Diagnostic BioSystems, Pleasanton, CA, United&#x20;States) or ProLong Diamond Antifade Mountant with DAPI (&#x23;P-36931 or &#x23;P36971, Thermo Fisher Scientific, Waltham, MA, United&#x20;States) for nuclear staining. DAPI (&#x23;11034-56; Nacalai Tesque, Kyoto, Japan) was also used to stain nuclei. Images were collected using an all-in-one fluorescence microscope (BZ-X700, KEYENCE Corporation). Immunopositive cells in the PFC (cingulate and prelimbic cortical regions) were manually quantified within the area (4.8 &#xd7; 10<sup>5</sup>&#xa0;&#x3bc;m) at bregma 1.98 to 1.78 by an experimenter blind to housing information.</p>
</sec>
<sec id="s2-9">
<title>RNA-Sequencing</title>
<p>RNA-seq was performed as a service by Bioengineering Lab. Co., Ltd. (Kanagawa, Japan). Briefly, total RNA was extracted with the AllPrep DNA/RNA Mini Kit (&#x23;80204, Qiagen, Hilden, Germany) according to the manufacturer&#x2019;s instruction. RNA integrity number (RIN) of total RNA was quantified by Agilent 2100 Bioanalyzer using Agilent RNA 6000 Pico Kit (&#x23;5067-1513, Agilent, Santa Clara, CA). Total RNA with RIN values of &#x2265;8.8 were used for RNA-seq library preparation. mRNA was purified from 500&#xa0;ng total RNA by KAPA mRNA Capture Kit (&#x23;KK8440, Kapa Biosystems, Boston, MA), and subjected to cDNA library making (fragmentation, first and second strand syntheses, adenylation, ligation and amplification) using KAPA Stranded mRNA-Seq Kit (&#x23;KK8400, Kapa Biosystems, Boston, MA) according to the manufacturer&#x2019;s instruction. cDNA library quality was quantified by 2100 Bioanalyzer using Agilent High Sensitivity DNA Kit (&#x23;5067-4626, Agilent, Santa Clara, CA). Library was sequenced as 151&#x20;bp paired-end on Illumina NextSeq&#x20;500.</p>
</sec>
<sec id="s2-10">
<title>RNA-Seq Data Analysis</title>
<p>RNA-seq data analysis was performed as described previously (<xref ref-type="bibr" rid="B58">Usui et&#x20;al., 2017a</xref>). Raw reads were first filtered for quality and trimmed for adapters using FASQC (<ext-link ext-link-type="uri" xlink:href="http://www.bioinformatics.babraham.ac.uk/projects/fastqc">http://www.bioinformatics.babraham.ac.uk/projects/fastqc</ext-link>) and Trimmomatic (<xref ref-type="bibr" rid="B8">Bolger et&#x20;al., 2014</xref>). Filtered reads were then aligned to the mouse genome mm10 (<ext-link ext-link-type="uri" xlink:href="https://genome.ucsc.edu">https://genome.ucsc.edu</ext-link>) using STAR v2.5.2b (<xref ref-type="bibr" rid="B14">Dobin et&#x20;al., 2013</xref>) allowing three mismatches. Uniquely mapped reads (bam flag NH:i:1) were used to obtain the gene counts using HTSeq package (<xref ref-type="bibr" rid="B3">Anders et&#x20;al., 2015</xref>), and the read counts were normalized to the CPM (counts per million) implemented in the edgeR package (<xref ref-type="bibr" rid="B42">Robinson et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B30">McCarthy et&#x20;al., 2012</xref>). For further analysis, we performed a sample-specific CPM filtering considering genes with CPM values of 1 in all replicates for treatments or controls. DESeq (<xref ref-type="bibr" rid="B2">Anders and Huber, 2010</xref>; <xref ref-type="bibr" rid="B26">Love et&#x20;al., 2014</xref>) was then used to detect the differentially expressed genes (DEGs). We applied a filter of FDR (adjusted <italic>p</italic>-value) of &#x3c;0.05 and absolute log fold change of &#x3e;0.3 to identify significantly changed genes. Gene ontology (GO) analysis with the significant DEGs was carried out using ToppGene (<ext-link ext-link-type="uri" xlink:href="https://toppgene.cchmc.org">https://toppgene.cchmc.org</ext-link>), and these GO terms were consolidated using REVIGO (<xref ref-type="bibr" rid="B50">Supek et&#x20;al., 2011</xref>). The list of autism spectrum disorder (ASD) genes was derived from the SFARI database (1010 genes; <ext-link ext-link-type="uri" xlink:href="https://gene.sfari.org/database/human-gene">https://gene.sfari.org/database/human-gene</ext-link>). The NCBI Gene Expression Omnibus (GEO) accession number for the RNA-seq data reported in this manuscript is GSE180055 (token: ivureikyjdwthuf).</p>
</sec>
<sec id="s2-11">
<title>Quantitative Real-Time PCR</title>
<p>qPCR was performed as described previously (<xref ref-type="bibr" rid="B60">Usui et&#x20;al., 2017b</xref>). Total RNA was extracted from the mouse PFC using the miRNeasy Mini Kit (&#x23;217004; Qiagen, Hilden, Germany) according to the manufacturer&#x2019;s instructions. Single-stranded cDNA was prepared using DNaseI, Amplification grade (&#x23;18068015; Thermo Fisher Scientific) and SuperScript III First-Strand Synthesis SuperMix (&#x23;18080400; Thermo Fisher Scientific) and amplified by PCR according to the manufacturer&#x2019;s instructions. qRT-PCR was performed using PowerUp SYBR Green Master Mix (&#x23;A25742; Thermo Fisher Scientific) and a QuantStudio 7 Flex Real-Time PCR System (Thermo Fisher Scientific). Each biological sample had four technical replicates for qPCR, and the number of biological replicates for each experiment is indicated in each figure legend. <italic>18S</italic> rRNA was used as a reference for normalization. Data were analyzed by the &#x394;&#x394;Cq method using QuantStudio 7 Flex Real-Time PCR System software (Thermo Fisher Scientific). The following primers were used: <italic>18S rRNA</italic>, F-5&#x2032;-GAGGGAGCCTGAGAAACGG-3&#x2032;, R-5&#x2032;-GTCGGGAGTGGGTAATTTGC-3&#x2032;; <italic>mZbtb16</italic>, F-5&#x2032;-AGGGAGCTGTTCAGCAAGC-3&#x2032;, R-5&#x2032;-TCATCCCACTGTGCAGTTTC-3&#x2032;; <italic>mBanp</italic>, F-5&#x2032;-GTGGTTCAGATTGCAGTGGA-3&#x2032;, R-5&#x2032;-TCAAGGCAGGTTCATCATCA-3&#x2032;; <italic>mHif3a</italic>, F-5&#x2032;-GAGTGGAACCAGGTGGAAAA-3&#x2032;, R-5&#x2032;-TCTTGGTCACAGGGATGGAT-3&#x2032;; <italic>mNr4a1</italic>, F-5&#x2032;-CAATGCTTCGTGTCAGCACT-3&#x2032;, R-5&#x2032;-TGGCGCTTTTCTGTACTGTG-3&#x2032;; <italic>mPer2</italic>, F-5&#x2032;-GCGGTCACGTTTTCCACTAT-3&#x2032;, R-5&#x2032;-CTTGGGGAGAAGTCCACGTA-3&#x2032;; <italic>mFos</italic>, F-5&#x2032;-ATGGGCTCTCCTGTCAACAC-3&#x2032;, R-5&#x2032;-TGTCACCGTGGGGATAAAGT-3&#x2032;; <italic>mMcf2l</italic>, F-5&#x2032;-TGGCCCTAGAAGAAATGGTG-3&#x2032;, R-5&#x2032;-TTCTTCAGCTGCTCCTGGAT-3&#x2032;; <italic>mTsc22d3</italic>, F-5&#x2032;-GGTGGCCCTAGACAACAAGA-3&#x2032;, R-5&#x2032;-TCTTCTCAAGCAGCTCACGA-3&#x2032;; <italic>mLrfn2</italic>, F-5&#x2032;-GGTCAAGTGGTCTGTCAGCA-3&#x2032;, R-5&#x2032;-TAGCCAGTACGCACAAGTCG-3&#x2032;; <italic>mOsbpl3</italic>, F-5&#x2032;-GGAATACAGCGAGCTTCTGG-3&#x2032;, R-5&#x2032;-TGCATTCGTACGTTTCTCCA-3&#x2032;; <italic>mFkbp5</italic>, F-5&#x2032;-CCCCAATGCTGAGCTTATGT-3&#x2032;, R-5&#x2032;-TCCCTTCTCTTTCACGATGG-3&#x2032;; <italic>mSh2d3c</italic>, F-5&#x2032;-GGCGAAGCATTACCATGACT-3&#x2032;, R-5&#x2032;-TGGAGATCTGGGATCTGGTC-3&#x2032;; <italic>mArc</italic>, F-5&#x2032;-AGCCAGGAGAATGACACCAG-3&#x2032;, R-5&#x2032;-CCAGGCACCTCCTCTCTGTA-3&#x2032;; <italic>mNpas4</italic>, F-5&#x2032;-GGACTTGGCCACCTATGAAA-3&#x2032;, R-5&#x2032;-GCTCCACGTCTTGATGACAA-3&#x2032;; <italic>mCys1</italic>, F-5&#x2032;-CTACGCCTGCTGGATCAGTT-3&#x2032;, R-5&#x2032;-ACAGCTGTCTTCAGGGTTGC-3&#x2032;. Cycling conditions were 50&#xb0;C for 2&#xa0;min and 95&#xb0;C for 2&#xa0;min, followed by 40 cycles at 95&#xb0;C for 1&#xa0;s and 60&#xb0;C for 30&#xa0;s according to the manufacturer&#x2019;s instructions.</p>
</sec>
<sec id="s2-12">
<title>Statistical Analysis</title>
<p>All behavioral data are represented as the means of biologically independent experiments with&#x20;&#xb1; standard errors of the mean (SEM). The statistical analyses (independent samples <italic>t</italic>-test and Pearson&#x2019;s r) were performed using the GraphPad Prism 9 software. Asterisks indicate <italic>p</italic>-values (&#x2a;&#x2a;&#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.0001, &#x2a;&#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.001, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01, &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05) with <italic>p</italic>&#x20;&#x3c; 0.05 being considered as the threshold of statistical significance.</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec id="s3-1">
<title>ELS Caused Adolescent Social Impairments</title>
<p>To investigate the influence of ELS on behaviors, cytoarchitecture, and transcriptome in the PFC of adolescent mice, we performed social isolation immediately after the weaning (<xref ref-type="fig" rid="F1">Figure&#x20;1A</xref>). After the social isolation period (P21&#x2013;P50), we found that there was no difference in the weight between controls and ELS mice (control &#x3d; 26.89&#x20;&#xb1; 0.34, ELS &#x3d; 27.55&#x20;&#xb1; 0.45, 95 %Cl &#x3d; &#x2212;0.4800 to 1.786, <italic>p</italic>&#x20;&#x3d; 0.25) (<xref ref-type="fig" rid="F1">Figure&#x20;1B</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Experimental scheme. <bold>(A)</bold> Experimental design and time course of early life stress (ELS). In ELS mice, male mice were individually housed after the weaning at postnatal days 21 (P21) until P50. In control mice, 4 male mice were co-housed in the same cage after the weaning at P21. Mouse behaviors, brain, and gene expression were analyzed at P50 and P67, respectively. <bold>(B)</bold> No significant difference in the weight after social isolation. Data are presented as means (&#xb1;SEM), unpaired <italic>t</italic>-test, <italic>n</italic>&#x20;&#x3d; 15&#x2013;16/condition. CTL, control mice; ELS, early life stressed mice.</p>
</caption>
<graphic xlink:href="fgene-12-754198-g001.tif"/>
</fig>
<p>We examined social behaviors by multiple evaluation tests. In the sociability trial of three-chamber social interaction test, control and ELS mice interacted with a social target (stranger 1) in approach (controls: empty &#x3d; 3.00&#x20;&#xb1; 0.43, stranger 1&#x20;&#x3d; 6.19&#x20;&#xb1; 0.44, 95 %Cl &#x3d; 1.934 to 4.441, <italic>p</italic>&#x20;&#x3c; 0.0001; ELS mice: empty &#x3d; 2.47&#x20;&#xb1; 0.64, stranger 1&#x20;&#x3d; 4.20&#x20;&#xb1; 0.42, 95 %Cl &#x3d; 0.1712 to 3.295, <italic>p</italic>&#x20;&#x3d; 0.0309) (<xref ref-type="fig" rid="F2">Figures 2A,B</xref>), distance (controls: empty &#x3d; 47.08&#x20;&#xb1; 9.68, stranger 1&#x20;&#x3d; 233.50&#x20;&#xb1; 21.56, 95 %Cl &#x3d; 138.2 to 234.7, <italic>p</italic>&#x20;&#x3c; 0.0001; ELS mice: empty &#x3d; 47.18&#x20;&#xb1; 11.98, stranger 1&#x20;&#x3d; 146.10&#x20;&#xb1; 23.30, 95 %Cl &#x3d; 45.22 to 152.6, <italic>p</italic>&#x20;&#x3d; 0.0008) (<xref ref-type="fig" rid="F2">Figures 2E,F</xref>), and time (controls: empty &#x3d; 27.09&#x20;&#xb1; 5.97, stranger 1&#x20;&#x3d; 153.20&#x20;&#xb1; 11.92, 95 %Cl &#x3d; 98.90 to 153.4, <italic>p</italic>&#x20;&#x3c; 0.0001; ELS mice: empty &#x3d; 24.17&#x20;&#xb1; 6.79, stranger 1&#x20;&#x3d; 125.60&#x20;&#xb1; 18.37, 95 %Cl &#x3d; 61.27 to 141.5, <italic>p</italic>&#x20;&#x3c; 0.0001) (<xref ref-type="fig" rid="F2">Figures 2I,J</xref>). However, ELS mice showed fewer interactions compared with control mice (approach: 95 %Cl &#x3d; &#x2212;3.230 to &#x2212;0.7452, <italic>p</italic>&#x20;&#x3d; 0.0028; distance: 95 %Cl &#x3d; &#x2212;152.3 to &#x2212;22.63, <italic>p</italic>&#x20;&#x3d; 0.0099; time: 95 %Cl &#x3d; &#x2212;71.89 to 16.58, <italic>p</italic>&#x20;&#x3d; 0.21) (<xref ref-type="sec" rid="s11">Supplementary Figure S1</xref>), indicating the reduction of sociability in ELS mice. In the social novelty trial, control mice displayed more interactions with stranger mouse (stranger 2) than familiar mouse in approach (familiar &#x3d; 5.31&#x20;&#xb1; 0.47, stranger 2&#x20;&#x3d; 5.44&#x20;&#xb1; 0.45, 95 %Cl &#x3d; &#x2212;1.202 to 1.452, <italic>p</italic>&#x20;&#x3d; 0.85) (<xref ref-type="fig" rid="F2">Figure&#x20;2C</xref>), distance (familiar &#x3d; 97.04&#x20;&#xb1; 9.61, stranger 2&#x20;&#x3d; 159.5&#x20;&#xb1; 10.98, 95 %Cl &#x3d; 32.68 to 92.29, <italic>p</italic>&#x20;&#x3d; 0.0002) (<xref ref-type="fig" rid="F2">Figure&#x20;2G</xref>), and time (familiar &#x3d; 59.63&#x20;&#xb1; 6.08, stranger 2&#x20;&#x3d; 104.70&#x20;&#xb1; 6.86, 95 %Cl &#x3d; 26.31 to 63.75, <italic>p</italic>&#x20;&#x3c; 0.0001) (<xref ref-type="fig" rid="F2">Figure&#x20;2K</xref>). In contrast, ELS mice showed no different interactions between a stranger mouse and a familiar mouse in approach (familiar &#x3d; 3.80&#x20;&#xb1; 0.73, stranger 2&#x20;&#x3d; 3.33&#x20;&#xb1; 0.47, 95 %Cl &#x3d; &#x2212;2.242 to 1.309, <italic>p</italic>&#x20;&#x3d; 0.59) (<xref ref-type="fig" rid="F2">Figure&#x20;2D</xref>), distance (familiar &#x3d; 84.09&#x20;&#xb1; 20.02, stranger 2&#x20;&#x3d; 104.80&#x20;&#xb1; 18.65, 95 %Cl &#x3d; 35.30 to 76.80, <italic>p</italic>&#x20;&#x3d; 0.46) (<xref ref-type="fig" rid="F2">Figure&#x20;2H</xref>), and time (familiar &#x3d; 67.63&#x20;&#xb1; 19.05, stranger 2&#x20;&#x3d; 87.20&#x20;&#xb1; 18.78, 95 %Cl &#x3d; &#x2212;35.22 to 74.35, <italic>p</italic>&#x20;&#x3d; 0.47) (<xref ref-type="fig" rid="F2">Figure&#x20;2L</xref>). These results indicate that sociability and social novelty are both impaired in adolescent ELS&#x20;mice.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Social impairments induced by ELS. <bold>(A&#x2013;L)</bold> Quantifications of three-chamber social interaction test results. The numbers of approaches <bold>(A&#x2013;D)</bold>, distance <bold>(E&#x2013;H)</bold>, and time <bold>(I&#x2013;L)</bold> were shown during the 2nd trial (sociability behavior) <bold>(A, B, E, F, I, J)</bold> and the 3rd trial (social novelty behavior) <bold>(C, D, G, H, K, L)</bold> of three-chamber social interaction test (3CSI), respectively. Sociability and social novelty were impaired in adolescent ELS mice. CTL was shown in black, and the ELS was shown in blue. E, empty; S1, stranger mouse 1; S2, stranger mouse 2; SI, social interaction test. <bold>(M)</bold> Reduced number of social interactions in adolescent ELS mice. <bold>(N, O)</bold> Quantifications of social preference in ELS mice. The number of interaction <bold>(N)</bold> and distance <bold>(O)</bold> were reduced in ELS mice. SP, social preference test. Data are presented as means (&#xb1;SEM). Asterisks indicate &#x2a;&#x2a;&#x2a;&#x2a;p &#x3c; 0.0001, &#x2a;&#x2a;&#x2a;p &#x3c; 0.001, &#x2a;&#x2a;<italic>p</italic>&#x20;&#x3c; 0.01, &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, unpaired <italic>t</italic>-test, <italic>n</italic>&#x20;&#x3d; 15&#x2013;16/condition for 3CSI and SP, <italic>n</italic>&#x20;&#x3d; 16&#x2013;18/condition for SI.</p>
</caption>
<graphic xlink:href="fgene-12-754198-g002.tif"/>
</fig>
<p>We next examined social interaction under the free moving condition in the chamber, and found the reduced social interaction events in ELS mice (control &#x3d; 92.44&#x20;&#xb1; 5.05, ELS &#x3d; 68.88&#x20;&#xb1; 6.39, 95 %Cl &#x3d; &#x2212;39.99 to &#x2212;7.145, <italic>p</italic>&#x20;&#x3d; 0.0063) (<xref ref-type="fig" rid="F2">Figure&#x20;2M</xref>). We also found that the reductions of social interaction events (control &#x3d; 26.27&#x20;&#xb1; 1.78, ELS &#x3d; 17.06&#x20;&#xb1; 2.23, 95 %Cl &#x3d; &#x2212;15.09 to &#x2212;3.314, <italic>p</italic>&#x20;&#x3d; 0.0034) (<xref ref-type="fig" rid="F2">Figure&#x20;2N</xref>) and distance around social target (control &#x3d; 1586&#x20;&#xb1; 87.56, ELS &#x3d; 1219&#x20;&#xb1; 111.1, 95 %Cl &#x3d; &#x2212;659.0 to &#x2212;75.29, <italic>p</italic>&#x20;&#x3d; 0.0155) (<xref ref-type="fig" rid="F2">Figure&#x20;2O</xref>) in ELS mice by social preference test. Together, these results demonstrate that various social behaviors are impaired in adolescent ELS&#x20;mice.</p>
</sec>
<sec id="s3-2">
<title>Anxiety-Like Behavior Induced by ELS</title>
<p>Since the ELS mice showed impaired social behaviors, we investigated anxiety-like behaviors as social-associated behaviors. In light-dark box test, we found that decreased time (control &#x3d; 177.50&#x20;&#xb1; 25.29, ELS &#x3d; 92.46&#x20;&#xb1; 23.84, 95 %Cl &#x3d; &#x2212;156.4 to &#x2212;13.75, <italic>p</italic>&#x20;&#x3d; 0.0209) (<xref ref-type="fig" rid="F3">Figure&#x20;3A</xref>) and distance (control &#x3d; 696.90&#x20;&#xb1; 104.00, ELS &#x3d; 397.10&#x20;&#xb1; 100.10, 95 %Cl &#x3d; &#x2212;595.7 to &#x2212;4.104, <italic>p</italic>&#x20;&#x3d; 0.0471) (<xref ref-type="fig" rid="F3">Figure&#x20;3B</xref>) of the light room in ELS mice. We also found that decreased the number of transitions between the rooms (control &#x3d; 26.00&#x20;&#xb1; 3.26, ELS &#x3d; 14.94&#x20;&#xb1; 3.53, 95 %Cl &#x3d; &#x2212;20.84 to &#x2212;1.285, <italic>p</italic>&#x20;&#x3d; 0.0278) (<xref ref-type="fig" rid="F3">Figure&#x20;3C</xref>) and increased latency time (control &#x3d; 73.24&#x20;&#xb1; 30.97, ELS &#x3d; 246.2&#x20;&#xb1; 63.68, 95 %Cl &#x3d; 33.67 to 312.2, <italic>p</italic>&#x20;&#x3d; 0.0166) (<xref ref-type="fig" rid="F3">Figure&#x20;3D</xref>) in ELS mice. In addition, decreased time (control &#x3d; 13.63&#x20;&#xb1; 3.22, ELS &#x3d; 4.99&#x20;&#xb1; 1.50, 95 %Cl &#x3d; &#x2212;16.90 to &#x2212;0.3771, <italic>p</italic>&#x20;&#x3d; 0.0409) (<xref ref-type="fig" rid="F3">Figure&#x20;3E</xref>) and distance (control &#x3d; 89.2&#x20;&#xb1; 18.19, ELS &#x3d; 37.4&#x20;&#xb1; 9.68, 95 %Cl &#x3d; &#x2212;99.05 to &#x2212;4.552, <italic>p</italic>&#x20;&#x3d; 0.0325) (<xref ref-type="fig" rid="F3">Figure&#x20;3F</xref>) in the center area of open field test, and the number of entries to the center area (control &#x3d; 7.70&#x20;&#xb1; 1.14, ELS &#x3d; 4.50&#x20;&#xb1; 0.82, 95 %Cl &#x3d; &#x2212;6.291 to &#x2212;0.1001, <italic>p</italic>&#x20;&#x3d; 0.0434) (<xref ref-type="fig" rid="F3">Figure&#x20;3G</xref>) were observed in ELS mice. We also examined repetitive behavior of ELS mice by marble-burying test, however there was no difference (control &#x3d; 5.04&#x20;&#xb1; 1.11, ELS &#x3d; 4.25&#x20;&#xb1; 0.96, 95 %Cl &#x3d; &#x2212;3.951 to 2.364, <italic>p</italic>&#x20;&#x3d; 0.61) (<xref ref-type="fig" rid="F3">Figure&#x20;3H</xref>). These results indicate that anxiety-like behavior is increased in ELS&#x20;mice.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Increased anxiety-like behaviors in ELS mice. <bold>(A&#x2013;D)</bold> Quantifications of light-dark box test result. Significant reductions of time <bold>(A)</bold> and distance <bold>(B)</bold> in light room, the transition number between the rooms <bold>(C)</bold>, and latency time to enter the light room <bold>(D)</bold> were observed in adolescent ELS mice. LD, light-dark box test. <bold>(E&#x2013;G)</bold> Quantifications of open field test result. Significant reductions of time <bold>(E)</bold>, distance <bold>(F)</bold>, and the number of entries <bold>(G)</bold> in center were observed in adolescent ELS mice. <bold>(H)</bold> Quantification of the number of buried marbles. There was no difference in the repetitive behavior in adolescent ELS mice. MB, marble-burying test; OF, open field test. Data are presented as means (&#xb1;SEM). Asterisk indicates &#x2a;p &#x3c; 0.05, unpaired <italic>t</italic>-test, <italic>n</italic>&#x20;&#x3d; 16&#x2013;18/condition for LD, <italic>n</italic>&#x20;&#x3d; 16&#x2013;23/condition for OF, <italic>n</italic>&#x20;&#x3d; 16&#x2013;23/condition for MB.</p>
</caption>
<graphic xlink:href="fgene-12-754198-g003.tif"/>
</fig>
</sec>
<sec id="s3-3">
<title>Neuronal Loss and Microglia Increase by ELS</title>
<p>Next, we examined how ELS affects the PFC cytoarchitecture. We found a slight reduction of the number of NeuN&#x2b; mature neurons in the PFC of ELS mice (control &#x3d; 358.00&#x20;&#xb1; 6.89, ELS &#x3d; 329.80&#x20;&#xb1; 9.95, 95 %Cl &#x3d; &#x2212;56.12 to &#x2212;0.2850, <italic>p</italic>&#x20;&#x3d; 0.0482) (<xref ref-type="fig" rid="F4">Figures 4A,C,D</xref>). We found a slight increase of the number of Iba1&#x2b; microglia in the PFC of ELS mice (control &#x3d; 103.20&#x20;&#xb1; 2.44, ELS &#x3d; 115.00&#x20;&#xb1; 4.18, 95 %Cl &#x3d; 0.6355 to 22.96, <italic>p</italic>&#x20;&#x3d; 0.0407) (<xref ref-type="fig" rid="F4">Figures 4B,C,E</xref>). These results indicate that ELS caused a decrease in the number of neurons and an increase in the number of microglia in the PFC of adolescent ELS&#x20;mice.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Neuronal loss and microglia increase in the PFC of ELS mice. <bold>(A, B)</bold> Representative fluorescent images of NeuN&#x2b; neuron <bold>(A)</bold> and Iba1&#x2b; microglia <bold>(B)</bold>. <bold>(C)</bold> Schematic diagram of mouse cortex analyzed at bregma 1.94. <bold>(D, E)</bold> Quantifications of NeuN&#x2b; neuron <bold>(D)</bold> and Iba1&#x2b; microglia <bold>(E)</bold> in the PFC. Decreased NeuN&#x2b; neurons and increased Iba1&#x2b; microglia were observed in the PFC of adolescent ELS mice. Data are presented as means (&#xb1;SEM). Asterisk indicates &#x2a;<italic>p</italic>&#x20;&#x3c; 0.05, unpaired <italic>t</italic>-test, <italic>n</italic>&#x20;&#x3d; 5/condition. Scale bars: 100&#xa0;&#x3bc;m.</p>
</caption>
<graphic xlink:href="fgene-12-754198-g004.tif"/>
</fig>
</sec>
<sec id="s3-4">
<title>ELS Altered PFC Transcriptome</title>
<p>To understand the molecular mechanisms underlying behavioral and histological phenotypes, we characterized the transcriptome in the PFC of ELS mice by RNA-seq. Transcriptome profiles were clearly separated between control and ELS mice (<xref ref-type="fig" rid="F5">Figure&#x20;5A</xref>). Differential expression analysis of the RNA-seq data uncovered 15 DEGs (FDR &#x3c; 0.05) in PFC of ELS mice compared to control mice (<xref ref-type="fig" rid="F5">Figure&#x20;5B</xref>, <xref ref-type="sec" rid="s11">Supplementary Table S1</xref>). GO analysis for the DEGs highlighted functions involved in regulation of transcription by RNA polymerase II, positive regulation of transcription, positive regulation of RNA metabolic process, response to corticosterone, response to mineralocorticoid, and trans&#x2212;synaptic signaling (<xref ref-type="fig" rid="F5">Figure&#x20;5C</xref>, <xref ref-type="sec" rid="s11">Supplementary Table S2</xref>). DEGs were also involved in the pathway in glucocorticoid receptor regulatory network, and diseases such as sleep disorders, <italic>Clostridium difficile</italic>, glucocorticoid receptor deficiency, substance withdrawal syndrome, and stress, psychological (<xref ref-type="fig" rid="F5">Figure&#x20;5C</xref>, <xref ref-type="sec" rid="s11">Supplementary Table S2</xref>). The expressions of DEGs were confirmed in the PFC of ELS mice by qPCR (<xref ref-type="fig" rid="F5">Figure&#x20;5D</xref>). Since ELS mice exhibited social impairments, we overlapped the DEGs with the gene list of ASD, a developmental disorder that shows impairments in social communication. Then, we found that 3 DEGs (<italic>Zbtb16</italic>, <italic>Per2</italic>, <italic>Lrfn2</italic>) overlapped with SFARI ASD genes (<xref ref-type="fig" rid="F5">Figure&#x20;5E</xref>). Together, these results indicate that ELS affected genes are involved in transcriptional regulation, stress signaling, and sleep disorders. Our results also suggest that 3 DEGs (<italic>Zbtb16</italic>, <italic>Per2</italic>, <italic>Lrfn2</italic>) are involved in sociality.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Transcriptomic alteration in the PFC of ELS mice. <bold>(A)</bold> Heatmap of gene expressions in the PFC. <bold>(B)</bold> Volcano plots showing ELS differentially expressed genes (DEGs). FDR &#x3c; 0.05. X-axis &#x3d; &#x2212;log10(Pvalue), Y-axis &#x3d; log2(FC). FC, fold change. <bold>(C)</bold> Scatter plots represent functional enrichment of ELS DEGs in biological process (BP), disease, molecular function (MF), and pathway. X-axis &#x3d; &#x2212;log10(Pvalue), Y-axis &#x3d; the number of genes. <italic>p</italic>-Values reported by FDR &#x3c; 0.05 threshold. <bold>(D)</bold> qPCR confirmation of ELS DEGs expressions in the PFC. <bold>(E)</bold> Venn diagram of ELS DEGs overlapping with SFARI autism spectrum disorder (ASD) genes. The overlapping 3 genes are <italic>Zbtb16, Per2,</italic> and <italic>Lrfn2</italic>. <italic>n</italic>&#x20;&#x3d; 3/condition for RNA-seq.</p>
</caption>
<graphic xlink:href="fgene-12-754198-g005.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>In this study, we demonstrate that ELS causes the impairments of social behaviors (sociality, social novelty, and social preference) and an increased anxiety-like behavior in adolescent mice. ELS induced neuronal loss and microglia increase in the PFC of adolescent mice. As the ELS-affected genes, we identified 15 DEGs involved in transcriptional regulation, stress signaling, and sleep disorders in the PFC of adolescent&#x20;mice.</p>
<p>Previous studies have reported that social isolation at pre-adolescent period caused the reduction of sociality in mice (<xref ref-type="bibr" rid="B28">Makinodan et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B61">Usui et&#x20;al., 2021b</xref>). Here we showed that various social impairments and increased anxiety-like behaviors in ELS mice (<xref ref-type="fig" rid="F2">Figures 2</xref>, <xref ref-type="fig" rid="F3">3</xref>). Social isolation during adulthood has been used as a well-known method of generating depression models, and such mice show increased anxiety-like behaviors (<xref ref-type="bibr" rid="B15">Du Preez et&#x20;al., 2020</xref>). In fact, increased anxiety-like behavior, repetitive behavior, memory impairment, and depression-like behavior have been reported in mice that were socially isolated earlier (P14&#x2013;50) than our condition (<xref ref-type="bibr" rid="B35">Niwa et&#x20;al., 2011</xref>). Sociality and anxiety are closely related and are controlled by neural circuits centered on PFC and amygdala (<xref ref-type="bibr" rid="B48">Stein and Stein, 2008</xref>; <xref ref-type="bibr" rid="B37">Penninx et&#x20;al., 2021</xref>). These two brain regions have been reported as ones of corresponding regions involved in social behaviors (<xref ref-type="bibr" rid="B1">Amaral et&#x20;al., 2008</xref>), and are also known as the brain regions impaired by neglect and maltreatment (<xref ref-type="bibr" rid="B54">Teicher et&#x20;al., 2016</xref>). In the PFC of ELS mice, we observed slight changes in the numbers of NeuN&#x2b; mature neurons and Iba1&#x2b; microglia (<xref ref-type="fig" rid="F4">Figure&#x20;4</xref>). This result suggests the possibility that ELS may cause inflammation and results neuronal cell death in the brain. To support this idea, previous studies have reported neuronal cell death due to chronic stress (<xref ref-type="bibr" rid="B7">Bachis et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B34">Natarajan et&#x20;al., 2017</xref>). Moreover, chronic stress has been reported to increase blood corticosterone and induce an increase in microglia (<xref ref-type="bibr" rid="B15">Du Preez et&#x20;al., 2020</xref>). It will be interesting to analyze the effects of ELS on the amygdala as a future&#x20;study.</p>
<p>In terms of gene expression in the PFC of ELS mice, we identify total 15 DEGs involved in transcriptional regulation, stress signaling, and sleep disorders (<xref ref-type="fig" rid="F5">Figures 5B,C</xref>). It was reasonable that there were changes in the genes related to such GOs due to ELS. Among those DEGs, there were many transcription factors, suggesting ELS causes functional changes in PFC. The alterations of genes involved in stress signals were presumed to be the effects of chronic stress due to social isolation. It is known that sleep disorders coexist in social withdrawal (<xref ref-type="bibr" rid="B43">Rubin et&#x20;al., 2009</xref>) and psychiatric disorders such as major depressive disorder (<xref ref-type="bibr" rid="B19">Goldstein and Walker, 2014</xref>; <xref ref-type="bibr" rid="B36">Otte et&#x20;al., 2016</xref>). Our data suggests that the alterations of genes associated with circadian rhythm such as <italic>Per2</italic> and <italic>Npas4</italic> due to the influences of ELS may trigger sleep disorders.</p>
<p>In order to explore the gene involved in sociality, we overwrapped the DEGs with SFARI ASD gene list, and identified <italic>Zbtb16</italic>, <italic>Per2</italic>, and <italic>Lrfn2</italic> (<xref ref-type="fig" rid="F5">Figure&#x20;5E</xref>). Zbtb16 (Plzf) is known as a transcription factor playing key roles in many biological processes such as stem cell proliferation, differentiation, apoptosis, chromatin remodeling, metabolism and immunity (<xref ref-type="bibr" rid="B49">Suliman et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B45">&#x160;eda et&#x20;al., 2017</xref>). <italic>ZBTB16</italic> is associated with ASD (<xref ref-type="bibr" rid="B6">Bacchelli et&#x20;al., 2019</xref>) and skeletal defects, genital hypoplasia, and mental retardation (SGYMR) (<xref ref-type="bibr" rid="B64">Wieczorek et&#x20;al., 2002</xref>; <xref ref-type="bibr" rid="B18">Fischer et&#x20;al., 2008</xref>). <italic>Zbtb16</italic> KO mice displayed ASD-like behaviors such as social impairment and increased repetitive behaviors as well as cognitive impairment (<xref ref-type="bibr" rid="B59">Usui et&#x20;al., 2021a</xref>). However, <italic>Zbtb16</italic> KO mice showed antianxiety-like (risk-taking) behaviors (<xref ref-type="bibr" rid="B59">Usui et&#x20;al., 2021a</xref>). Per2 is known as a clock gene of Period family and controls circadian rhythm under the CLOCK/ARNTL regulation (<xref ref-type="bibr" rid="B51">Takahashi, 2017</xref>; <xref ref-type="bibr" rid="B40">Rijo-Ferreira and Takahashi, 2019</xref>). <italic>PER2</italic> is also associated with ASD (<xref ref-type="bibr" rid="B20">Iossifov et&#x20;al., 2014</xref>; <xref ref-type="bibr" rid="B41">RK et&#x20;al., 2017</xref>), and sleep problem has been reported to coexist in developmental disorders such as ASD (<xref ref-type="bibr" rid="B12">Couturier et&#x20;al., 2005</xref>; <xref ref-type="bibr" rid="B25">Krakowiak et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B47">Souders et&#x20;al., 2009</xref>; <xref ref-type="bibr" rid="B29">Mazurek and Sohl, 2016</xref>). Moreover, it has been reported that <italic>Per2</italic> expression was altered by social defeat stress (<xref ref-type="bibr" rid="B32">Moravcov&#xe1; et&#x20;al., 2021</xref>). Lrfn2 (SALM1) is known as a synapse adhesion molecule interacting with PSD-95 (<xref ref-type="bibr" rid="B24">Ko et&#x20;al., 2006</xref>). <italic>LRFN2</italic> is associated with ASD (<xref ref-type="bibr" rid="B62">Voineagu et&#x20;al., 2011</xref>), learning disabilities (<xref ref-type="bibr" rid="B55">Thevenon et&#x20;al., 2016</xref>), and antisocial personality disorder (<xref ref-type="bibr" rid="B39">Rautiainen et&#x20;al., 2016</xref>). <italic>Lrfn2</italic> KO mice also displayed ASD-like behaviors such as social withdrawal, decreased vocal communications, increased repetitive behaviors and prepulse inhibition deficits, but not anxiety-like behaviors (<xref ref-type="bibr" rid="B33">Morimura et&#x20;al., 2017</xref>). <italic>Lrfn2</italic> KO mice also displayed synaptic morphological abnormalities in the CA1 hippocampal neurons, resulting LTP enhancement (<xref ref-type="bibr" rid="B33">Morimura et&#x20;al., 2017</xref>). Together, these findings suggest that <italic>Zbtb16</italic>, <italic>Per2</italic>, and <italic>Lrfn2</italic> are the genes involved in sociality.</p>
<p>We acknowledge that our study has several limitations. Since only male mice are used in this study, caution must be taken in interpreting the results of behavioral analysis. In addition, despite the analysis of the effects of environmental factors, the sample size in transcriptome analysis was small and the <italic>p</italic> value in gene expressions was not significant, thus only few genes were identified as DEGs. It is expected that increasing the sample size will lead to the identification of more genes affected by ELS. Furthermore, it is also important to understand the maternal gestational stress as a one of ELS, which is known to affect the brain development and behavior of the offspring. Previous studies have reported that maternal gestational stress has an epigenetic alteration on offspring gene expression as well as impairments of motor and cognitive development, immune system, and adaptation to stress (<xref ref-type="bibr" rid="B63">Wadhwa et&#x20;al., 2001</xref>; <xref ref-type="bibr" rid="B23">Kingston et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B4">Argyraki et&#x20;al., 2019</xref>).</p>
<p>In conclusion, our results demonstrate that ELS impacts adolescent social behaviors, anxiety-like behaviors, and PFC characteristics in mice. Our study suggests that ELS causes the alterations in the cytoarchitecture and transcriptome of PFC, leading to social impairments and increased anxiety-like behaviors in adolescents.</p>
</sec>
</body>
<back>
<sec id="s5">
<title>Data Availability Statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>.</p>
</sec>
<sec id="s6">
<title>Ethics Statement</title>
<p>The animal study was reviewed and approved by the Animal Research Committee of the University of Fukui.</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>Conceptualization, NU; methodology, NU; validation, NU, GK, HM, and SS; formal analysis, NU, RA, YO, and SB; investigation, NU, RA, YO, and SB; resources, NU; writing&#x2014;original draft preparation, NU; writing&#x2014;review and editing, NU, SB, GK, HM, and SS; visualization, NU and SB; supervision, GK, HM, and SS; project administration, NU; funding acquisition, NU. All authors have read and agreed to the published version of the manuscript.</p>
</sec>
<sec id="s8">
<title>Funding</title>
<p>This work was supported by the Japan Society for the Promotion of Science (JSPS) Grant-in-Aid for Scientific Research (C) (20K06872) to NU; JSPS Grant-in-Aid for Early-Career Scientists (18K14814) to NU; Uehara Memorial Foundation to NU; Takeda Science Foundation to NU; SENSHIN Medical Research Foundation to NU; The Osaka Medical Research Foundation for Intractable Diseases to NU; Public Health Science Foundation to NU; Eli Lilly Japan Research Grant to NU; The Grant for Life Cycle Medicine from Faculty of Medical Sciences, University of Fukui to&#x20;NU. This study was supported by Center for Medical Research and Education, Graduate School of Medicine, Osaka University, and CoMIT Omics Center, Graduate School of Medicine, Osaka University.</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>We thank Yuuto Ohara, Yuuki Takaba, Xie Min-Jue, Yoko Sasaki, and Tomoko Taniguchi for their support.</p>
</ack>
<sec id="s11">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fgene.2021.754198/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fgene.2021.754198/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material>
<label>Supplementary Figure S1</label>
<caption>
<p>An impairment of sociality in ELS mice.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Table S1</label>
<caption>
<p>The list of DEGs in ELS&#x20;mice.</p>
</caption>
</supplementary-material>
<supplementary-material>
<label>Supplementary Table S2</label>
<caption>
<p>The list of ToppGene information of&#x20;DEGs.</p>
</caption>
</supplementary-material>
<supplementary-material xlink:href="Table2.XLSX" id="SM1" mimetype="application/XLSX" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Table1.XLSX" id="SM2" mimetype="application/XLSX" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Image1.pdf" id="SM3" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Amaral</surname>
<given-names>D. G.</given-names>
</name>
<name>
<surname>Schumann</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Nordahl</surname>
<given-names>C. W.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Neuroanatomy of Autism</article-title>. <source>Trends Neurosciences</source> <volume>31</volume>, <fpage>137</fpage>&#x2013;<lpage>145</lpage>. <pub-id pub-id-type="doi">10.1016/j.tins.2007.12.005</pub-id> </citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Anders</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Huber</surname>
<given-names>W.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Differential Expression Analysis for Sequence Count Data</article-title>. <source>Genome Biol.</source> <volume>11</volume>, <fpage>R106</fpage>. <pub-id pub-id-type="doi">10.1186/gb-2010-11-10-r106</pub-id> </citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Anders</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Pyl</surname>
<given-names>P. T.</given-names>
</name>
<name>
<surname>Huber</surname>
<given-names>W.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>HTSeq--a Python Framework to Work with High-Throughput Sequencing Data</article-title>. <source>Bioinformatics</source> <volume>31</volume>, <fpage>166</fpage>&#x2013;<lpage>169</lpage>. <pub-id pub-id-type="doi">10.1093/bioinformatics/btu638</pub-id> </citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Argyraki</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Damdimopoulou</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Chatzimeletiou</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Grimbizis</surname>
<given-names>G. F.</given-names>
</name>
<name>
<surname>Tarlatzis</surname>
<given-names>B. C.</given-names>
</name>
<name>
<surname>Syrrou</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>In-utero Stress and Mode of conception: Impact on Regulation of Imprinted Genes, Fetal Development and Future Health</article-title>. <source>Hum. Reprod. Update</source> <volume>25</volume>, <fpage>777</fpage>&#x2013;<lpage>801</lpage>. <pub-id pub-id-type="doi">10.1093/humupd/dmz025</pub-id> </citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Aspesi</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Pinna</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Animal Models of post-traumatic Stress Disorder and Novel Treatment Targets</article-title>. <source>Behav. Pharmacol.</source> <volume>30</volume>, <fpage>130</fpage>&#x2013;<lpage>150</lpage>. <pub-id pub-id-type="doi">10.1097/fbp.0000000000000467</pub-id> </citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bacchelli</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Loi</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Cameli</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Moi</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Vega Benedetti</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Blois</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Analysis of a Sardinian Multiplex Family with Autism Spectrum Disorder Points to Post-Synaptic Density Gene Variants and Identifies CAPG as a Functionally Relevant Candidate Gene</article-title>. <source>Jcm</source> <volume>8</volume>, <fpage>212</fpage>. <pub-id pub-id-type="doi">10.3390/jcm8020212</pub-id> </citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bachis</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Cruz</surname>
<given-names>M. I.</given-names>
</name>
<name>
<surname>Nosheny</surname>
<given-names>R. L.</given-names>
</name>
<name>
<surname>Mocchetti</surname>
<given-names>I.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Chronic Unpredictable Stress Promotes Neuronal Apoptosis in the Cerebral Cortex</article-title>. <source>Neurosci. Lett.</source> <volume>442</volume>, <fpage>104</fpage>&#x2013;<lpage>108</lpage>. <pub-id pub-id-type="doi">10.1016/j.neulet.2008.06.081</pub-id> </citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bolger</surname>
<given-names>A. M.</given-names>
</name>
<name>
<surname>Lohse</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Usadel</surname>
<given-names>B.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Trimmomatic: a Flexible Trimmer for Illumina Sequence Data</article-title>. <source>Bioinformatics</source> <volume>30</volume>, <fpage>2114</fpage>&#x2013;<lpage>2120</lpage>. <pub-id pub-id-type="doi">10.1093/bioinformatics/btu170</pub-id> </citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chugani</surname>
<given-names>H. T.</given-names>
</name>
<name>
<surname>Behen</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Muzik</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Juh&#xe1;sz</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Nagy</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Chugani</surname>
<given-names>D. C.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>Local Brain Functional Activity Following Early Deprivation: a Study of Postinstitutionalized Romanian Orphans</article-title>. <source>NeuroImage</source> <volume>14</volume>, <fpage>1290</fpage>&#x2013;<lpage>1301</lpage>. <pub-id pub-id-type="doi">10.1006/nimg.2001.0917</pub-id> </citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cohen</surname>
<given-names>R. A.</given-names>
</name>
<name>
<surname>Grieve</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Hoth</surname>
<given-names>K. F.</given-names>
</name>
<name>
<surname>Paul</surname>
<given-names>R. H.</given-names>
</name>
<name>
<surname>Sweet</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Tate</surname>
<given-names>D.</given-names>
</name>
<etal/>
</person-group> (<year>2006</year>). <article-title>Early Life Stress and Morphometry of the Adult Anterior Cingulate Cortex and Caudate Nuclei</article-title>. <source>Biol. Psychiatry</source> <volume>59</volume>, <fpage>975</fpage>&#x2013;<lpage>982</lpage>. <pub-id pub-id-type="doi">10.1016/j.biopsych.2005.12.016</pub-id> </citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Consiglio</surname>
<given-names>C. R.</given-names>
</name>
<name>
<surname>Brodin</surname>
<given-names>P.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Stressful Beginnings with Long-Term Consequences</article-title>. <source>Cell</source> <volume>180</volume>, <fpage>820</fpage>&#x2013;<lpage>821</lpage>. <pub-id pub-id-type="doi">10.1016/j.cell.2020.02.021</pub-id> </citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Couturier</surname>
<given-names>J.&#x20;L.</given-names>
</name>
<name>
<surname>Speechley</surname>
<given-names>K. N.</given-names>
</name>
<name>
<surname>Steele</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Norman</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Stringer</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Nicolson</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Parental Perception of Sleep Problems in Children of normal Intelligence with Pervasive Developmental Disorders: Prevalence, Severity, and Pattern</article-title>. <source>J.&#x20;Am. Acad. Child Adolesc. Psychiatry</source> <volume>44</volume>, <fpage>815</fpage>&#x2013;<lpage>822</lpage>. <pub-id pub-id-type="doi">10.1097/01.chi.0000166377.22651.87</pub-id> </citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dannlowski</surname>
<given-names>U.</given-names>
</name>
<name>
<surname>Stuhrmann</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Beutelmann</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Zwanzger</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Lenzen</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Grotegerd</surname>
<given-names>D.</given-names>
</name>
<etal/>
</person-group> (<year>2012</year>). <article-title>Limbic Scars: Long-Term Consequences of Childhood Maltreatment Revealed by Functional and Structural Magnetic Resonance Imaging</article-title>. <source>Biol. Psychiatry</source> <volume>71</volume>, <fpage>286</fpage>&#x2013;<lpage>293</lpage>. <pub-id pub-id-type="doi">10.1016/j.biopsych.2011.10.021</pub-id> </citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dobin</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Davis</surname>
<given-names>C. A.</given-names>
</name>
<name>
<surname>Schlesinger</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Drenkow</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zaleski</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Jha</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2013</year>). <article-title>STAR: Ultrafast Universal RNA-Seq Aligner</article-title>. <source>Bioinformatics</source> <volume>29</volume>, <fpage>15</fpage>&#x2013;<lpage>21</lpage>. <pub-id pub-id-type="doi">10.1093/bioinformatics/bts635</pub-id> </citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Du Preez</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Law</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Onorato</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Lim</surname>
<given-names>Y. M.</given-names>
</name>
<name>
<surname>Eiben</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Musaelyan</surname>
<given-names>K.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>The Type of Stress Matters: Repeated Injection and Permanent Social Isolation Stress in Male Mice Have a Differential Effect on Anxiety- and Depressive-like Behaviours, and Associated Biological Alterations</article-title>. <source>Transl Psychiatry</source> <volume>10</volume>, <fpage>325</fpage>. <pub-id pub-id-type="doi">10.1038/s41398-020-01000-3</pub-id> </citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Edmiston</surname>
<given-names>E. E.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Mazure</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Guiney</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Sinha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Mayes</surname>
<given-names>L. C.</given-names>
</name>
<etal/>
</person-group> (<year>2011</year>). <article-title>Corticostriatal-limbic gray Matter Morphology in Adolescents with Self-Reported Exposure to Childhood Maltreatment</article-title>. <source>Arch. Pediatr. Adolesc. Med.</source> <volume>165</volume>, <fpage>1069</fpage>&#x2013;<lpage>1077</lpage>. <pub-id pub-id-type="doi">10.1001/archpediatrics.2011.565</pub-id> </citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ferguson</surname>
<given-names>K. T.</given-names>
</name>
<name>
<surname>Cassells</surname>
<given-names>R. C.</given-names>
</name>
<name>
<surname>MacAllister</surname>
<given-names>J.&#x20;W.</given-names>
</name>
<name>
<surname>Evans</surname>
<given-names>G. W.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>The Physical Environment and Child Development: an International Review</article-title>. <source>Int. J.&#x20;Psychol.</source> <volume>48</volume>, <fpage>437</fpage>&#x2013;<lpage>468</lpage>. <pub-id pub-id-type="doi">10.1080/00207594.2013.804190</pub-id> </citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fischer</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kohlhase</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>B&#xf6;hm</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Schweiger</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Hoffmann</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Heitmann</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2008</year>). <article-title>Biallelic Loss of Function of the Promyelocytic Leukaemia Zinc finger (PLZF) Gene Causes Severe Skeletal Defects and Genital Hypoplasia</article-title>. <source>J.&#x20;Med. Genet.</source> <volume>45</volume>, <fpage>731</fpage>&#x2013;<lpage>737</lpage>. <pub-id pub-id-type="doi">10.1136/jmg.2008.059451</pub-id> </citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Goldstein</surname>
<given-names>A. N.</given-names>
</name>
<name>
<surname>Walker</surname>
<given-names>M. P.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>The Role of Sleep in Emotional Brain Function</article-title>. <source>Annu. Rev. Clin. Psychol.</source> <volume>10</volume>, <fpage>679</fpage>&#x2013;<lpage>708</lpage>. <pub-id pub-id-type="doi">10.1146/annurev-clinpsy-032813-153716</pub-id> </citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Iossifov</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>O&#x2019;Roak</surname>
<given-names>B. J.</given-names>
</name>
<name>
<surname>Sanders</surname>
<given-names>S. J.</given-names>
</name>
<name>
<surname>Ronemus</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Krumm</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Levy</surname>
<given-names>D.</given-names>
</name>
<etal/>
</person-group> (<year>2014</year>). <article-title>The Contribution of De Novo Coding Mutations to Autism Spectrum Disorder</article-title>. <source>Nature</source> <volume>515</volume>, <fpage>216</fpage>&#x2013;<lpage>221</lpage>. <pub-id pub-id-type="doi">10.1038/nature13908</pub-id> </citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jaffee</surname>
<given-names>S. R.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Child Maltreatment and Risk for Psychopathology in Childhood and Adulthood</article-title>. <source>Annu. Rev. Clin. Psychol.</source> <volume>13</volume>, <fpage>525</fpage>&#x2013;<lpage>551</lpage>. <pub-id pub-id-type="doi">10.1146/annurev-clinpsy-032816-045005</pub-id> </citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kelly</surname>
<given-names>P. A.</given-names>
</name>
<name>
<surname>Viding</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Wallace</surname>
<given-names>G. L.</given-names>
</name>
<name>
<surname>Schaer</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>De Brito</surname>
<given-names>S. A.</given-names>
</name>
<name>
<surname>Robustelli</surname>
<given-names>B.</given-names>
</name>
<etal/>
</person-group> (<year>2013</year>). <article-title>Cortical Thickness, Surface Area, and Gyrification Abnormalities in Children Exposed to Maltreatment: Neural Markers of Vulnerability?</article-title> <source>Biol. Psychiatry</source> <volume>74</volume>, <fpage>845</fpage>&#x2013;<lpage>852</lpage>. <pub-id pub-id-type="doi">10.1016/j.biopsych.2013.06.020</pub-id> </citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kingston</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Tough</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Whitfield</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Prenatal and Postpartum Maternal Psychological Distress and Infant Development: a Systematic Review</article-title>. <source>Child. Psychiatry Hum. Dev.</source> <volume>43</volume>, <fpage>683</fpage>&#x2013;<lpage>714</lpage>. <pub-id pub-id-type="doi">10.1007/s10578-012-0291-4</pub-id> </citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ko</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Chung</surname>
<given-names>H. S.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Han</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2006</year>). <article-title>SALM Synaptic Cell Adhesion-like Molecules Regulate the Differentiation of Excitatory Synapses</article-title>. <source>Neuron</source> <volume>50</volume>, <fpage>233</fpage>&#x2013;<lpage>245</lpage>. <pub-id pub-id-type="doi">10.1016/j.neuron.2006.04.005</pub-id> </citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Krakowiak</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Goodlin-Jones</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Hertz-Picciotto</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Croen</surname>
<given-names>L. A.</given-names>
</name>
<name>
<surname>Hansen</surname>
<given-names>R. L.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Sleep Problems in Children with Autism Spectrum Disorders, Developmental Delays, and Typical Development: a Population-Based Study</article-title>. <source>J.&#x20;Sleep Res.</source> <volume>17</volume>, <fpage>197</fpage>&#x2013;<lpage>206</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-2869.2008.00650.x</pub-id> </citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Love</surname>
<given-names>M. I.</given-names>
</name>
<name>
<surname>Huber</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Anders</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Moderated Estimation of Fold Change and Dispersion for RNA-Seq Data with DESeq2</article-title>. <source>Genome Biol.</source> <volume>15</volume>, <fpage>550</fpage>. <pub-id pub-id-type="doi">10.1186/s13059-014-0550-8</pub-id> </citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mackes</surname>
<given-names>N. K.</given-names>
</name>
<name>
<surname>Golm</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Sarkar</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kumsta</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Rutter</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Fairchild</surname>
<given-names>G.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Early Childhood Deprivation Is Associated with Alterations in Adult Brain Structure Despite Subsequent Environmental Enrichment</article-title>. <source>Proc. Natl. Acad. Sci. USA</source> <volume>117</volume>, <fpage>641</fpage>&#x2013;<lpage>649</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1911264116</pub-id> </citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Makinodan</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Rosen</surname>
<given-names>K. M.</given-names>
</name>
<name>
<surname>Ito</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Corfas</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>A Critical Period for Social Experience-dependent Oligodendrocyte Maturation and Myelination</article-title>. <source>Science</source> <volume>337</volume>, <fpage>1357</fpage>&#x2013;<lpage>1360</lpage>. <pub-id pub-id-type="doi">10.1126/science.1220845</pub-id> </citation>
</ref>
<ref id="B29">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mazurek</surname>
<given-names>M. O.</given-names>
</name>
<name>
<surname>Sohl</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Sleep and Behavioral Problems in Children with Autism Spectrum Disorder</article-title>. <source>J.&#x20;Autism Dev. Disord.</source> <volume>46</volume>, <fpage>1906</fpage>&#x2013;<lpage>1915</lpage>. <pub-id pub-id-type="doi">10.1007/s10803-016-2723-7</pub-id> </citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>McCarthy</surname>
<given-names>D. J.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Smyth</surname>
<given-names>G. K.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Differential Expression Analysis of Multifactor RNA-Seq Experiments with Respect to Biological Variation</article-title>. <source>Nucleic Acids Res.</source> <volume>40</volume>, <fpage>4288</fpage>&#x2013;<lpage>4297</lpage>. <pub-id pub-id-type="doi">10.1093/nar/gks042</pub-id> </citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Miguel</surname>
<given-names>P. M.</given-names>
</name>
<name>
<surname>Pereira</surname>
<given-names>L. O.</given-names>
</name>
<name>
<surname>Silveira</surname>
<given-names>P. P.</given-names>
</name>
<name>
<surname>Meaney</surname>
<given-names>M. J.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Early Environmental Influences on the Development of Children&#x27;s Brain Structure and Function</article-title>. <source>Dev. Med. Child. Neurol.</source> <volume>61</volume>, <fpage>1127</fpage>&#x2013;<lpage>1133</lpage>. <pub-id pub-id-type="doi">10.1111/dmcn.14182</pub-id> </citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Moravcov&#xe1;</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>&#x10c;erven&#xe1;</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>M&#xed;kov&#xe1;</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Pa&#x10d;esov&#xe1;</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Pallag</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Novotn&#xfd;</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Social Defeat Stress Affects Resident&#x27;s Clock Gene and Bdnf Expression in the Brain</article-title>. <source>Stress</source> <volume>24</volume>, <fpage>206</fpage>&#x2013;<lpage>212</lpage>. <pub-id pub-id-type="doi">10.1080/10253890.2020.1759548</pub-id> </citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Morimura</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Yasuda</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Yamaguchi</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Katayama</surname>
<given-names>K.-i.</given-names>
</name>
<name>
<surname>Hatayama</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Tomioka</surname>
<given-names>N. H.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Autism-like Behaviours and Enhanced Memory Formation and Synaptic Plasticity in Lrfn2/SALM1-Deficient Mice</article-title>. <source>Nat. Commun.</source> <volume>8</volume>, <fpage>15800</fpage>. <pub-id pub-id-type="doi">10.1038/ncomms15800</pub-id> </citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Natarajan</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Forrester</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Chiaia</surname>
<given-names>N. L.</given-names>
</name>
<name>
<surname>Yamamoto</surname>
<given-names>B. K.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Chronic-Stress-Induced Behavioral Changes Associated with Subregion-Selective Serotonin Cell Death in the Dorsal Raphe</article-title>. <source>J.&#x20;Neurosci.</source> <volume>37</volume>, <fpage>6214</fpage>&#x2013;<lpage>6223</lpage>. <pub-id pub-id-type="doi">10.1523/jneurosci.3781-16.2017</pub-id> </citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Niwa</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Matsumoto</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Mouri</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Ozaki</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Nabeshima</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Vulnerability in Early Life to Changes in the Rearing Environment Plays a Crucial Role in the Aetiopathology of Psychiatric Disorders</article-title>. <source>Int. J.&#x20;Neuropsychopharm.</source> <volume>14</volume>, <fpage>459</fpage>&#x2013;<lpage>477</lpage>. <pub-id pub-id-type="doi">10.1017/s1461145710001239</pub-id> </citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Otte</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Gold</surname>
<given-names>S. M.</given-names>
</name>
<name>
<surname>Penninx</surname>
<given-names>B. W.</given-names>
</name>
<name>
<surname>Pariante</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Etkin</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Fava</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Major Depressive Disorder</article-title>. <source>Nat. Rev. Dis. Primers</source> <volume>2</volume>, <fpage>16065</fpage>. <pub-id pub-id-type="doi">10.1038/nrdp.2016.65</pub-id> </citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Penninx</surname>
<given-names>B. W.</given-names>
</name>
<name>
<surname>Pine</surname>
<given-names>D. S.</given-names>
</name>
<name>
<surname>Holmes</surname>
<given-names>E. A.</given-names>
</name>
<name>
<surname>Reif</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Anxiety Disorders</article-title>. <source>The Lancet</source> <volume>397</volume>, <fpage>914</fpage>&#x2013;<lpage>927</lpage>. <pub-id pub-id-type="doi">10.1016/s0140-6736(21)00359-7</pub-id> </citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pinna</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Animal Models of PTSD: The Socially Isolated Mouse and the Biomarker Role of Allopregnanolone</article-title>. <source>Front. Behav. Neurosci.</source> <volume>13</volume>, <fpage>114</fpage>. <pub-id pub-id-type="doi">10.3389/fnbeh.2019.00114</pub-id> </citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rautiainen</surname>
<given-names>M.-R.</given-names>
</name>
<name>
<surname>Paunio</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Repo-Tiihonen</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Virkkunen</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Ollila</surname>
<given-names>H. M.</given-names>
</name>
<name>
<surname>Sulkava</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Genome-wide Association Study of Antisocial Personality Disorder</article-title>. <source>Transl Psychiatry</source> <volume>6</volume>, <fpage>e883</fpage>. <pub-id pub-id-type="doi">10.1038/tp.2016.155</pub-id> </citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rijo-Ferreira</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Takahashi</surname>
<given-names>J.&#x20;S.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Genomics of Circadian Rhythms in Health and Disease</article-title>. <source>Genome Med.</source> <volume>11</volume>, <fpage>82</fpage>. <pub-id pub-id-type="doi">10.1186/s13073-019-0704-0</pub-id> </citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rk</surname>
<given-names>C. Y.</given-names>
</name>
<name>
<surname>Merico</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Bookman</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>J</surname>
<given-names>L. H.</given-names>
</name>
<name>
<surname>Thiruvahindrapuram</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Patel</surname>
<given-names>R. V.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Whole Genome Sequencing Resource Identifies 18 New Candidate Genes for Autism Spectrum Disorder</article-title>. <source>Nat. Neurosci.</source> <volume>20</volume>, <fpage>602</fpage>&#x2013;<lpage>611</lpage>. <pub-id pub-id-type="doi">10.1038/nn.4524</pub-id> </citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Robinson</surname>
<given-names>M. D.</given-names>
</name>
<name>
<surname>McCarthy</surname>
<given-names>D. J.</given-names>
</name>
<name>
<surname>Smyth</surname>
<given-names>G. K.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>edgeR: a Bioconductor Package for Differential Expression Analysis of Digital Gene Expression Data</article-title>. <source>Bioinformatics</source> <volume>26</volume>, <fpage>139</fpage>&#x2013;<lpage>140</lpage>. <pub-id pub-id-type="doi">10.1093/bioinformatics/btp616</pub-id> </citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rubin</surname>
<given-names>K. H.</given-names>
</name>
<name>
<surname>Coplan</surname>
<given-names>R. J.</given-names>
</name>
<name>
<surname>Bowker</surname>
<given-names>J.&#x20;C.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Social Withdrawal in Childhood</article-title>. <source>Annu. Rev. Psychol.</source> <volume>60</volume>, <fpage>141</fpage>&#x2013;<lpage>171</lpage>. <pub-id pub-id-type="doi">10.1146/annurev.psych.60.110707.163642</pub-id> </citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sch&#xf6;ner</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Heinz</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Endres</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Gertz</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Kronenberg</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Post-traumatic Stress Disorder and beyond: an Overview of Rodent Stress Models</article-title>. <source>J.&#x20;Cel. Mol. Med.</source> <volume>21</volume>, <fpage>2248</fpage>&#x2013;<lpage>2256</lpage>. <pub-id pub-id-type="doi">10.1111/jcmm.13161</pub-id> </citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>&#x160;eda</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>&#x160;edov&#xe1;</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>V&#x10d;el&#xe1;k</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Va&#x148;kov&#xe1;</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Li&#x161;ka</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Bendlov&#xe1;</surname>
<given-names>B.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>ZBTB16 and Metabolic Syndrome: a Network Perspective</article-title>. <source>Physiol. Res.</source> <volume>66</volume>, <fpage>S357</fpage>&#x2013;<lpage>s365</lpage>. <pub-id pub-id-type="doi">10.33549/physiolres.933730</pub-id> </citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sonuga-Barke</surname>
<given-names>E. J.&#x20;S.</given-names>
</name>
<name>
<surname>Kennedy</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Kumsta</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Knights</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Golm</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Rutter</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Child-to-adult Neurodevelopmental and Mental Health Trajectories after Early Life Deprivation: the Young Adult Follow-Up of the Longitudinal English and Romanian Adoptees Study</article-title>. <source>The Lancet</source> <volume>389</volume>, <fpage>1539</fpage>&#x2013;<lpage>1548</lpage>. <pub-id pub-id-type="doi">10.1016/s0140-6736(17)30045-4</pub-id> </citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Souders</surname>
<given-names>M. C.</given-names>
</name>
<name>
<surname>Mason</surname>
<given-names>T. B. A.</given-names>
</name>
<name>
<surname>Valladares</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Bucan</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Levy</surname>
<given-names>S. E.</given-names>
</name>
<name>
<surname>Mandell</surname>
<given-names>D. S.</given-names>
</name>
<etal/>
</person-group> (<year>2009</year>). <article-title>Sleep Behaviors and Sleep Quality in Children with Autism Spectrum Disorders</article-title>. <source>Sleep</source> <volume>32</volume>, <fpage>1566</fpage>&#x2013;<lpage>1578</lpage>. <pub-id pub-id-type="doi">10.1093/sleep/32.12.1566</pub-id> </citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Stein</surname>
<given-names>M. B.</given-names>
</name>
<name>
<surname>Stein</surname>
<given-names>D. J.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Social Anxiety Disorder</article-title>. <source>The Lancet</source> <volume>371</volume>, <fpage>1115</fpage>&#x2013;<lpage>1125</lpage>. <pub-id pub-id-type="doi">10.1016/s0140-6736(08)60488-2</pub-id> </citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Suliman</surname>
<given-names>B. A.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Williams</surname>
<given-names>B. R. G.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>The Promyelocytic Leukemia Zinc finger Protein: Two Decades of Molecular Oncology</article-title>. <source>Front. Oncol.</source> <volume>2</volume>, <fpage>74</fpage>. <pub-id pub-id-type="doi">10.3389/fonc.2012.00074</pub-id> </citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Supek</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Bo&#x161;njak</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>&#x160;kunca</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>&#x160;muc</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms</article-title>. <source>PloS one</source> <volume>6</volume>, <fpage>e21800</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0021800</pub-id> </citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Takahashi</surname>
<given-names>J.&#x20;S.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Transcriptional Architecture of the Mammalian Circadian Clock</article-title>. <source>Nat. Rev. Genet.</source> <volume>18</volume>, <fpage>164</fpage>&#x2013;<lpage>179</lpage>. <pub-id pub-id-type="doi">10.1038/nrg.2016.150</pub-id> </citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Takesian</surname>
<given-names>A. E.</given-names>
</name>
<name>
<surname>Hensch</surname>
<given-names>T. K.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Balancing Plasticity/stability across Brain Development</article-title>. <source>Prog. Brain Res.</source> <volume>207</volume>, <fpage>3</fpage>&#x2013;<lpage>34</lpage>. <pub-id pub-id-type="doi">10.1016/b978-0-444-63327-9.00001-1</pub-id> </citation>
</ref>
<ref id="B53">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Teicher</surname>
<given-names>M. H.</given-names>
</name>
<name>
<surname>Anderson</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Polcari</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Childhood Maltreatment Is Associated with Reduced Volume in the Hippocampal Subfields CA3, Dentate Gyrus, and Subiculum</article-title>. <source>Proc. Natl. Acad. Sci.</source> <volume>109</volume>, <fpage>E563</fpage>&#x2013;<lpage>E572</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1115396109</pub-id> </citation>
</ref>
<ref id="B54">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Teicher</surname>
<given-names>M. H.</given-names>
</name>
<name>
<surname>Samson</surname>
<given-names>J.&#x20;A.</given-names>
</name>
<name>
<surname>Anderson</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Ohashi</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>The Effects of Childhood Maltreatment on Brain Structure, Function and Connectivity</article-title>. <source>Nat. Rev. Neurosci.</source> <volume>17</volume>, <fpage>652</fpage>&#x2013;<lpage>666</lpage>. <pub-id pub-id-type="doi">10.1038/nrn.2016.111</pub-id> </citation>
</ref>
<ref id="B55">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thevenon</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Souchay</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Seabold</surname>
<given-names>G. K.</given-names>
</name>
<name>
<surname>Dygai-Cochet</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Callier</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Gay</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Heterozygous Deletion of the LRFN2 Gene Is Associated with Working Memory Deficits</article-title>. <source>Eur. J.&#x20;Hum. Genet.</source> <volume>24</volume>, <fpage>911</fpage>&#x2013;<lpage>918</lpage>. <pub-id pub-id-type="doi">10.1038/ejhg.2015.221</pub-id> </citation>
</ref>
<ref id="B56">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tomoda</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Sheu</surname>
<given-names>Y.-S.</given-names>
</name>
<name>
<surname>Rabi</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Suzuki</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Navalta</surname>
<given-names>C. P.</given-names>
</name>
<name>
<surname>Polcari</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2011</year>). <article-title>Exposure to Parental Verbal Abuse Is Associated with Increased gray Matter Volume in superior Temporal Gyrus</article-title>. <source>NeuroImage</source> <volume>54</volume> (<issue>Suppl. 1</issue>), <fpage>S280</fpage>&#x2013;<lpage>S286</lpage>. <pub-id pub-id-type="doi">10.1016/j.neuroimage.2010.05.027</pub-id> </citation>
</ref>
<ref id="B57">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tomoda</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Suzuki</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Rabi</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Sheu</surname>
<given-names>Y.-S.</given-names>
</name>
<name>
<surname>Polcari</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Teicher</surname>
<given-names>M. H.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Reduced Prefrontal Cortical gray Matter Volume in Young Adults Exposed to Harsh Corporal Punishment</article-title>. <source>NeuroImage</source> <volume>47</volume> (<issue>Suppl. 2</issue>), <fpage>T66</fpage>&#x2013;<lpage>T71</lpage>. <pub-id pub-id-type="doi">10.1016/j.neuroimage.2009.03.005</pub-id> </citation>
</ref>
<ref id="B58">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Usui</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Araujo</surname>
<given-names>D. J.</given-names>
</name>
<name>
<surname>Kulkarni</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Co</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Ellegood</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Harper</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2017a</year>). <article-title>Foxp1 Regulation of Neonatal Vocalizations via Cortical Development</article-title>. <source>Genes Dev.</source> <volume>31</volume>, <fpage>2039</fpage>&#x2013;<lpage>2055</lpage>. <pub-id pub-id-type="doi">10.1101/gad.305037.117</pub-id> </citation>
</ref>
<ref id="B59">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Usui</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Berto</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Konishi</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kondo</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Konopka</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Matsuzaki</surname>
<given-names>H.</given-names>
</name>
<etal/>
</person-group> (<year>2021a</year>). <article-title>Zbtb16 Regulates Social Cognitive Behaviors and Neocortical Development</article-title>. <source>Transl Psychiatry</source> <volume>11</volume>, <fpage>242</fpage>. <pub-id pub-id-type="doi">10.1038/s41398-021-01358-y</pub-id> </citation>
</ref>
<ref id="B60">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Usui</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Co</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Harper</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Rieger</surname>
<given-names>M. A.</given-names>
</name>
<name>
<surname>Dougherty</surname>
<given-names>J.&#x20;D.</given-names>
</name>
<name>
<surname>Konopka</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2017b</year>). <article-title>Sumoylation of FOXP2 Regulates Motor Function and Vocal Communication through Purkinje Cell Development</article-title>. <source>Biol. Psychiatry</source> <volume>81</volume>, <fpage>220</fpage>&#x2013;<lpage>230</lpage>. <pub-id pub-id-type="doi">10.1016/j.biopsych.2016.02.008</pub-id> </citation>
</ref>
<ref id="B61">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Usui</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Matsuzaki</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Shimada</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2021b</year>). <article-title>Characterization of Early Life Stress-Affected Gut Microbiota</article-title>. <source>Brain Sci.</source> <volume>11</volume>, <fpage>913</fpage>. <pub-id pub-id-type="doi">10.3390/brainsci11070913</pub-id> </citation>
</ref>
<ref id="B62">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Voineagu</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Johnston</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Lowe</surname>
<given-names>J.&#x20;K.</given-names>
</name>
<name>
<surname>Tian</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Horvath</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2011</year>). <article-title>Transcriptomic Analysis of Autistic Brain Reveals Convergent Molecular Pathology</article-title>. <source>Nature</source> <volume>474</volume>, <fpage>380</fpage>&#x2013;<lpage>384</lpage>. <pub-id pub-id-type="doi">10.1038/nature10110</pub-id> </citation>
</ref>
<ref id="B63">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wadhwa</surname>
<given-names>P. D.</given-names>
</name>
<name>
<surname>Sandman</surname>
<given-names>C. A.</given-names>
</name>
<name>
<surname>Garite</surname>
<given-names>T. J.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>Chapter 9 the Neurobiology of Stress in Human Pregnancy: Implications for Prematurity and Development of the Fetal central Nervous System</article-title>. <source>Prog. Brain Res.</source> <volume>133</volume>, <fpage>131</fpage>&#x2013;<lpage>142</lpage>. <pub-id pub-id-type="doi">10.1016/s0079-6123(01)33010-8</pub-id> </citation>
</ref>
<ref id="B64">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wieczorek</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>K&#xf6;ster</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Gillessen-Kaesbach</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Absence of Thumbs, A/hypoplasia of Radius, Hypoplasia of Ulnae, Retarded Bone Age, Short Stature, Microcephaly, Hypoplastic Genitalia, and Mental Retardation</article-title>. <source>Am. J.&#x20;Med. Genet.</source> <volume>108</volume>, <fpage>209</fpage>&#x2013;<lpage>213</lpage>. <pub-id pub-id-type="doi">10.1002/ajmg.10271</pub-id> </citation>
</ref>
<ref id="B65">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yamamuro</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Yoshino</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Ogawa</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Makinodan</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Toritsuka</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Yamashita</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Social Isolation during the Critical Period Reduces Synaptic and Intrinsic Excitability of a Subtype of Pyramidal Cell in Mouse Prefrontal Cortex</article-title>. <source>Cereb. Cortex</source> <volume>28</volume>, <fpage>998</fpage>&#x2013;<lpage>1010</lpage>. <pub-id pub-id-type="doi">10.1093/cercor/bhx010</pub-id> </citation>
</ref>
</ref-list>
</back>
</article>